Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24924.t1 | XP_003604475.1 | 98 | 304 | 6 | 0 | 1 | 304 | 1 | 304 | 4.60E-170 | 607.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24924.t1 | Q9CA93 | 71.8 | 294 | 74 | 4 | 1 | 294 | 1 | 285 | 1.0e-117 | 424.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24924.t1 | G7JJD6 | 98.0 | 304 | 6 | 0 | 1 | 304 | 1 | 304 | 3.3e-170 | 607.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049230 | MS.gene24924 | 0.805332 | 1.41E-49 | -1.69E-46 |
| MS.gene049419 | MS.gene24924 | -0.804786 | 1.83E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene24924 | 0.825226 | 5.26E-54 | -1.69E-46 |
| MS.gene050105 | MS.gene24924 | 0.822188 | 2.71E-53 | -1.69E-46 |
| MS.gene050508 | MS.gene24924 | 0.818791 | 1.63E-52 | -1.69E-46 |
| MS.gene051122 | MS.gene24924 | 0.826268 | 2.98E-54 | -1.69E-46 |
| MS.gene051452 | MS.gene24924 | 0.813806 | 2.12E-51 | -1.69E-46 |
| MS.gene051597 | MS.gene24924 | 0.815335 | 9.74E-52 | -1.69E-46 |
| MS.gene052108 | MS.gene24924 | 0.802922 | 4.46E-49 | -1.69E-46 |
| MS.gene052500 | MS.gene24924 | 0.822294 | 2.56E-53 | -1.69E-46 |
| MS.gene052502 | MS.gene24924 | 0.818957 | 1.49E-52 | -1.69E-46 |
| MS.gene052824 | MS.gene24924 | 0.81812 | 2.31E-52 | -1.69E-46 |
| MS.gene052826 | MS.gene24924 | 0.816265 | 6.05E-52 | -1.69E-46 |
| MS.gene052954 | MS.gene24924 | 0.898004 | 8.11E-77 | -1.69E-46 |
| MS.gene053188 | MS.gene24924 | 0.816574 | 5.16E-52 | -1.69E-46 |
| MS.gene054537 | MS.gene24924 | 0.802508 | 5.43E-49 | -1.69E-46 |
| MS.gene054657 | MS.gene24924 | 0.812217 | 4.74E-51 | -1.69E-46 |
| MS.gene055623 | MS.gene24924 | 0.802429 | 5.63E-49 | -1.69E-46 |
| MS.gene056506 | MS.gene24924 | 0.812138 | 4.93E-51 | -1.69E-46 |
| MS.gene057108 | MS.gene24924 | 0.80022 | 1.60E-48 | -1.69E-46 |
| MS.gene057109 | MS.gene24924 | 0.800845 | 1.19E-48 | -1.69E-46 |
| MS.gene057208 | MS.gene24924 | 0.816977 | 4.19E-52 | -1.69E-46 |
| MS.gene057392 | MS.gene24924 | 0.856063 | 4.14E-62 | -1.69E-46 |
| MS.gene05795 | MS.gene24924 | 0.810774 | 9.75E-51 | -1.69E-46 |
| MS.gene058595 | MS.gene24924 | 0.821062 | 4.93E-53 | -1.69E-46 |
| MS.gene059317 | MS.gene24924 | 0.806947 | 6.42E-50 | -1.69E-46 |
| MS.gene059710 | MS.gene24924 | 0.852831 | 3.57E-61 | -1.69E-46 |
| MS.gene060297 | MS.gene24924 | 0.809312 | 2.01E-50 | -1.69E-46 |
| MS.gene060840 | MS.gene24924 | 0.807785 | 4.27E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene048432 | MS.gene24924 | PPI |
| MS.gene24924 | MS.gene008988 | PPI |
| MS.gene027875 | MS.gene24924 | PPI |
| MS.gene24924 | MS.gene65990 | PPI |
| MS.gene069192 | MS.gene24924 | PPI |
| MS.gene036285 | MS.gene24924 | PPI |
| MS.gene47475 | MS.gene24924 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24924.t1 | MTR_4g012850 | 98.026 | 304 | 6 | 0 | 1 | 304 | 1 | 304 | 0.0 | 617 |
| MS.gene24924.t1 | MTR_2g102010 | 61.409 | 298 | 111 | 3 | 1 | 295 | 1 | 297 | 1.28e-125 | 360 |
| MS.gene24924.t1 | MTR_8g066975 | 35.862 | 290 | 168 | 6 | 14 | 288 | 6 | 292 | 2.28e-47 | 161 |
| MS.gene24924.t1 | MTR_5g030530 | 32.993 | 294 | 171 | 8 | 14 | 288 | 6 | 292 | 5.60e-41 | 144 |
| MS.gene24924.t1 | MTR_5g030530 | 30.198 | 202 | 117 | 9 | 107 | 292 | 6 | 199 | 7.85e-12 | 65.1 |
| MS.gene24924.t1 | MTR_4g088545 | 27.090 | 299 | 202 | 5 | 8 | 292 | 4 | 300 | 1.34e-31 | 120 |
| MS.gene24924.t1 | MTR_8g096050 | 27.437 | 277 | 192 | 5 | 14 | 286 | 225 | 496 | 8.37e-27 | 110 |
| MS.gene24924.t1 | MTR_8g096050 | 30.102 | 196 | 115 | 8 | 11 | 194 | 317 | 502 | 8.57e-13 | 68.9 |
| MS.gene24924.t1 | MTR_7g084400 | 26.596 | 282 | 185 | 5 | 14 | 286 | 211 | 479 | 3.92e-26 | 107 |
| MS.gene24924.t1 | MTR_3g098460 | 25.436 | 287 | 205 | 4 | 5 | 286 | 192 | 474 | 8.29e-26 | 107 |
| MS.gene24924.t1 | MTR_4g088545 | 27.869 | 244 | 161 | 4 | 8 | 237 | 4 | 246 | 3.29e-25 | 102 |
| MS.gene24924.t1 | MTR_4g088545 | 25.904 | 166 | 117 | 2 | 126 | 286 | 28 | 192 | 7.86e-14 | 70.5 |
| MS.gene24924.t1 | MTR_4g057850 | 33.206 | 262 | 158 | 9 | 17 | 267 | 23 | 278 | 4.69e-25 | 102 |
| MS.gene24924.t1 | MTR_4g057850 | 29.208 | 202 | 112 | 7 | 97 | 284 | 10 | 194 | 9.25e-12 | 65.1 |
| MS.gene24924.t1 | MTR_1g097890 | 29.643 | 280 | 166 | 8 | 17 | 292 | 52 | 304 | 1.33e-24 | 101 |
| MS.gene24924.t1 | MTR_8g092080 | 30.714 | 280 | 156 | 11 | 22 | 292 | 55 | 305 | 9.63e-24 | 99.4 |
| MS.gene24924.t1 | MTR_8g027975 | 32.692 | 208 | 125 | 6 | 101 | 296 | 37 | 241 | 5.08e-23 | 97.8 |
| MS.gene24924.t1 | MTR_8g027975 | 23.659 | 317 | 210 | 8 | 5 | 292 | 40 | 353 | 6.76e-18 | 83.2 |
| MS.gene24924.t1 | MTR_4g088545 | 27.411 | 197 | 133 | 3 | 8 | 195 | 4 | 199 | 7.71e-23 | 95.1 |
| MS.gene24924.t1 | MTR_4g088545 | 25.904 | 166 | 117 | 2 | 126 | 286 | 28 | 192 | 6.44e-14 | 70.5 |
| MS.gene24924.t1 | MTR_3g104600 | 28.053 | 303 | 188 | 8 | 14 | 292 | 33 | 329 | 8.02e-23 | 97.1 |
| MS.gene24924.t1 | MTR_6g034515 | 26.950 | 282 | 183 | 7 | 31 | 302 | 82 | 350 | 7.65e-22 | 94.7 |
| MS.gene24924.t1 | MTR_8g098240 | 30.403 | 273 | 173 | 7 | 18 | 286 | 322 | 581 | 7.93e-22 | 95.9 |
| MS.gene24924.t1 | MTR_8g098240 | 27.746 | 173 | 118 | 5 | 22 | 191 | 416 | 584 | 8.02e-12 | 66.2 |
| MS.gene24924.t1 | MTR_5g009500 | 31.683 | 202 | 123 | 6 | 97 | 286 | 20 | 218 | 1.01e-21 | 94.0 |
| MS.gene24924.t1 | MTR_5g009500 | 25.081 | 307 | 198 | 9 | 14 | 292 | 36 | 338 | 9.03e-18 | 82.8 |
| MS.gene24924.t1 | MTR_7g109135 | 27.891 | 294 | 183 | 10 | 22 | 295 | 25 | 309 | 1.16e-21 | 93.2 |
| MS.gene24924.t1 | MTR_7g109135 | 32.124 | 193 | 122 | 6 | 110 | 297 | 22 | 210 | 1.08e-15 | 76.6 |
| MS.gene24924.t1 | MTR_1g090330 | 26.070 | 257 | 169 | 7 | 31 | 273 | 29 | 278 | 2.66e-19 | 86.7 |
| MS.gene24924.t1 | MTR_1g090330 | 30.114 | 176 | 115 | 2 | 126 | 296 | 30 | 202 | 9.46e-19 | 85.1 |
| MS.gene24924.t1 | MTR_4g114320 | 23.711 | 291 | 213 | 4 | 8 | 296 | 115 | 398 | 4.85e-19 | 87.0 |
| MS.gene24924.t1 | MTR_8g086070 | 26.054 | 261 | 176 | 6 | 4 | 259 | 15 | 263 | 9.82e-19 | 85.1 |
| MS.gene24924.t1 | MTR_1g012030 | 25.000 | 288 | 205 | 6 | 8 | 292 | 131 | 410 | 1.01e-18 | 86.3 |
| MS.gene24924.t1 | MTR_1g012030 | 27.835 | 194 | 128 | 4 | 111 | 304 | 140 | 321 | 1.36e-17 | 82.8 |
| MS.gene24924.t1 | MTR_3g107510 | 26.471 | 204 | 137 | 4 | 104 | 304 | 117 | 310 | 1.01e-18 | 85.9 |
| MS.gene24924.t1 | MTR_3g107510 | 22.414 | 290 | 218 | 4 | 8 | 296 | 114 | 397 | 4.55e-18 | 84.3 |
| MS.gene24924.t1 | MTR_1g087840 | 26.909 | 275 | 181 | 7 | 32 | 292 | 35 | 303 | 1.48e-17 | 81.6 |
| MS.gene24924.t1 | MTR_1g087840 | 31.351 | 185 | 119 | 4 | 123 | 302 | 32 | 213 | 7.14e-14 | 71.2 |
| MS.gene24924.t1 | MTR_6g015860 | 24.503 | 302 | 200 | 11 | 25 | 303 | 21 | 317 | 1.81e-17 | 81.6 |
| MS.gene24924.t1 | MTR_5g055410 | 25.979 | 281 | 176 | 7 | 32 | 292 | 37 | 305 | 1.87e-17 | 82.0 |
| MS.gene24924.t1 | MTR_5g055410 | 32.065 | 184 | 116 | 5 | 123 | 302 | 34 | 212 | 4.72e-15 | 75.1 |
| MS.gene24924.t1 | MTR_7g109135 | 26.531 | 294 | 180 | 10 | 22 | 295 | 25 | 302 | 1.88e-17 | 81.6 |
| MS.gene24924.t1 | MTR_7g109135 | 28.796 | 191 | 124 | 6 | 110 | 297 | 22 | 203 | 8.29e-11 | 62.4 |
| MS.gene24924.t1 | MTR_6g091800 | 25.397 | 315 | 195 | 9 | 1 | 292 | 9 | 306 | 3.33e-17 | 80.9 |
| MS.gene24924.t1 | MTR_6g091800 | 29.612 | 206 | 122 | 7 | 97 | 286 | 5 | 203 | 1.64e-16 | 79.0 |
| MS.gene24924.t1 | MTR_6g091800 | 27.143 | 280 | 158 | 10 | 1 | 256 | 9 | 266 | 7.16e-17 | 79.3 |
| MS.gene24924.t1 | MTR_6g091800 | 29.293 | 198 | 118 | 6 | 104 | 286 | 13 | 203 | 7.82e-17 | 79.3 |
| MS.gene24924.t1 | MTR_6g091800 | 29.612 | 206 | 122 | 7 | 97 | 286 | 5 | 203 | 8.41e-17 | 79.0 |
| MS.gene24924.t1 | MTR_6g091800 | 27.059 | 255 | 149 | 8 | 1 | 235 | 9 | 246 | 1.03e-14 | 73.2 |
| MS.gene24924.t1 | MTR_5g073040 | 28.829 | 222 | 141 | 5 | 74 | 292 | 5 | 212 | 2.24e-16 | 78.6 |
| MS.gene24924.t1 | MTR_5g073040 | 27.413 | 259 | 169 | 6 | 17 | 266 | 40 | 288 | 7.77e-14 | 71.2 |
| MS.gene24924.t1 | MTR_8g019480 | 24.422 | 303 | 194 | 6 | 31 | 298 | 48 | 350 | 2.26e-16 | 79.0 |
| MS.gene24924.t1 | MTR_7g064980 | 29.825 | 171 | 110 | 3 | 125 | 286 | 40 | 209 | 2.67e-16 | 78.2 |
| MS.gene24924.t1 | MTR_7g064980 | 30.978 | 184 | 121 | 4 | 15 | 194 | 133 | 314 | 6.69e-16 | 77.0 |
| MS.gene24924.t1 | MTR_7g109135 | 27.083 | 240 | 157 | 7 | 65 | 295 | 1 | 231 | 3.27e-16 | 77.0 |
| MS.gene24924.t1 | MTR_6g091800 | 29.947 | 187 | 108 | 7 | 97 | 267 | 5 | 184 | 3.55e-16 | 75.5 |
| MS.gene24924.t1 | MTR_7g084400 | 28.571 | 196 | 125 | 6 | 96 | 286 | 194 | 379 | 4.13e-16 | 78.6 |
| MS.gene24924.t1 | MTR_7g084400 | 25.112 | 223 | 148 | 5 | 14 | 227 | 205 | 417 | 6.48e-15 | 75.1 |
| MS.gene24924.t1 | MTR_5g081910 | 25.914 | 301 | 168 | 11 | 31 | 286 | 23 | 313 | 2.62e-15 | 75.5 |
| MS.gene24924.t1 | MTR_3g100570 | 23.151 | 311 | 195 | 9 | 22 | 295 | 9 | 312 | 6.04e-15 | 74.3 |
| MS.gene24924.t1 | MTR_3g025800 | 27.653 | 311 | 191 | 8 | 14 | 294 | 26 | 332 | 7.70e-15 | 74.3 |
| MS.gene24924.t1 | MTR_7g109135 | 27.717 | 184 | 116 | 6 | 121 | 295 | 35 | 210 | 9.88e-15 | 72.4 |
| MS.gene24924.t1 | MTR_4g018750 | 24.161 | 298 | 198 | 8 | 11 | 291 | 10 | 296 | 1.21e-14 | 73.2 |
| MS.gene24924.t1 | MTR_7g015870 | 23.077 | 299 | 201 | 10 | 18 | 296 | 29 | 318 | 2.21e-14 | 72.8 |
| MS.gene24924.t1 | MTR_6g091800 | 23.615 | 343 | 190 | 11 | 1 | 292 | 9 | 330 | 2.65e-14 | 72.8 |
| MS.gene24924.t1 | MTR_7g015870 | 23.985 | 271 | 177 | 10 | 18 | 268 | 25 | 286 | 2.71e-14 | 72.8 |
| MS.gene24924.t1 | MTR_6g091800 | 24.522 | 314 | 173 | 10 | 1 | 267 | 9 | 305 | 2.87e-14 | 72.4 |
| MS.gene24924.t1 | MTR_8g076760 | 34.659 | 176 | 89 | 8 | 124 | 286 | 28 | 190 | 3.52e-14 | 72.0 |
| MS.gene24924.t1 | MTR_8g076760 | 26.056 | 284 | 181 | 10 | 31 | 292 | 29 | 305 | 1.96e-13 | 70.1 |
| MS.gene24924.t1 | MTR_4g018750 | 28.235 | 170 | 112 | 4 | 126 | 286 | 31 | 199 | 3.73e-14 | 71.6 |
| MS.gene24924.t1 | MTR_4g018750 | 24.906 | 265 | 171 | 8 | 11 | 258 | 10 | 263 | 2.83e-13 | 69.3 |
| MS.gene24924.t1 | MTR_4g005330 | 23.000 | 300 | 204 | 5 | 6 | 286 | 56 | 347 | 6.99e-14 | 71.6 |
| MS.gene24924.t1 | MTR_1g088995 | 28.740 | 254 | 157 | 9 | 31 | 273 | 48 | 288 | 7.35e-14 | 71.2 |
| MS.gene24924.t1 | MTR_6g034145 | 31.081 | 148 | 83 | 4 | 154 | 286 | 6 | 149 | 9.47e-14 | 70.1 |
| MS.gene24924.t1 | MTR_6g034145 | 24.615 | 260 | 164 | 7 | 53 | 292 | 5 | 252 | 2.13e-12 | 66.2 |
| MS.gene24924.t1 | MTR_5g032420 | 23.175 | 315 | 194 | 8 | 22 | 292 | 9 | 319 | 1.60e-13 | 70.5 |
| MS.gene24924.t1 | MTR_7g066690 | 22.973 | 296 | 196 | 7 | 16 | 292 | 17 | 299 | 1.62e-13 | 70.1 |
| MS.gene24924.t1 | MTR_2g436930 | 23.100 | 329 | 201 | 8 | 4 | 292 | 8 | 324 | 2.88e-13 | 69.7 |
| MS.gene24924.t1 | MTR_8g068890 | 22.654 | 309 | 196 | 7 | 22 | 292 | 9 | 312 | 3.10e-13 | 69.3 |
| MS.gene24924.t1 | MTR_8g068890 | 27.317 | 205 | 116 | 5 | 113 | 286 | 5 | 207 | 8.71e-12 | 65.1 |
| MS.gene24924.t1 | MTR_3g462140 | 30.409 | 171 | 108 | 4 | 126 | 286 | 31 | 200 | 3.15e-13 | 69.3 |
| MS.gene24924.t1 | MTR_3g462140 | 22.337 | 291 | 197 | 8 | 14 | 286 | 13 | 292 | 5.10e-11 | 62.8 |
| MS.gene24924.t1 | MTR_2g098070 | 29.197 | 137 | 93 | 2 | 150 | 286 | 214 | 346 | 3.62e-13 | 69.7 |
| MS.gene24924.t1 | MTR_2g032610 | 23.827 | 277 | 185 | 7 | 31 | 287 | 44 | 314 | 9.58e-13 | 68.2 |
| MS.gene24924.t1 | MTR_4g119770 | 25.381 | 197 | 127 | 4 | 112 | 291 | 16 | 209 | 2.03e-12 | 66.2 |
| MS.gene24924.t1 | MTR_5g081150 | 28.402 | 169 | 109 | 4 | 101 | 258 | 21 | 188 | 3.52e-12 | 65.5 |
| MS.gene24924.t1 | MTR_4g119770 | 25.381 | 197 | 127 | 4 | 112 | 291 | 16 | 209 | 4.00e-12 | 66.2 |
| MS.gene24924.t1 | MTR_4g119770 | 22.642 | 318 | 190 | 8 | 24 | 292 | 15 | 325 | 4.65e-12 | 66.2 |
| MS.gene24924.t1 | MTR_5g081150 | 28.402 | 169 | 109 | 4 | 101 | 258 | 21 | 188 | 6.05e-12 | 65.1 |
| MS.gene24924.t1 | MTR_5g081150 | 28.402 | 169 | 109 | 4 | 101 | 258 | 21 | 188 | 7.33e-12 | 65.5 |
| MS.gene24924.t1 | MTR_5g081150 | 32.258 | 186 | 116 | 5 | 15 | 194 | 140 | 321 | 9.61e-12 | 65.1 |
| MS.gene24924.t1 | MTR_8g107270 | 24.390 | 246 | 166 | 6 | 51 | 286 | 63 | 298 | 1.02e-11 | 65.1 |
| MS.gene24924.t1 | MTR_8g036880 | 29.197 | 137 | 93 | 2 | 150 | 286 | 251 | 383 | 1.31e-11 | 65.1 |
| MS.gene24924.t1 | MTR_1g095780 | 26.623 | 308 | 181 | 13 | 6 | 299 | 515 | 791 | 1.69e-11 | 65.1 |
| MS.gene24924.t1 | MTR_3g028590 | 27.044 | 159 | 107 | 3 | 133 | 286 | 223 | 377 | 2.08e-11 | 64.3 |
| MS.gene24924.t1 | MTR_3g028590 | 27.044 | 159 | 107 | 3 | 133 | 286 | 219 | 373 | 2.15e-11 | 64.3 |
| MS.gene24924.t1 | MTR_3g104810 | 23.776 | 286 | 181 | 7 | 18 | 268 | 36 | 319 | 3.37e-11 | 63.5 |
| MS.gene24924.t1 | MTR_2g436930 | 25.161 | 155 | 99 | 3 | 155 | 292 | 80 | 234 | 4.96e-11 | 62.0 |
| MS.gene24924.t1 | MTR_4g005330 | 22.628 | 274 | 185 | 5 | 32 | 286 | 16 | 281 | 8.65e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24924.t1 | AT1G79900 | 70.847 | 295 | 77 | 3 | 1 | 295 | 1 | 286 | 4.27e-142 | 402 |
| MS.gene24924.t1 | AT5G46800 | 34.576 | 295 | 168 | 7 | 14 | 288 | 6 | 295 | 8.59e-43 | 149 |
| MS.gene24924.t1 | AT5G46800 | 28.846 | 208 | 129 | 7 | 105 | 297 | 4 | 207 | 1.75e-11 | 64.3 |
| MS.gene24924.t1 | AT5G46800 | 34.576 | 295 | 168 | 7 | 14 | 288 | 6 | 295 | 8.59e-43 | 149 |
| MS.gene24924.t1 | AT5G46800 | 28.846 | 208 | 129 | 7 | 105 | 297 | 4 | 207 | 1.75e-11 | 64.3 |
| MS.gene24924.t1 | AT5G46800 | 34.576 | 295 | 168 | 7 | 14 | 288 | 6 | 295 | 8.59e-43 | 149 |
| MS.gene24924.t1 | AT5G46800 | 28.846 | 208 | 129 | 7 | 105 | 297 | 4 | 207 | 1.75e-11 | 64.3 |
| MS.gene24924.t1 | AT2G33820 | 26.962 | 293 | 198 | 5 | 14 | 292 | 16 | 306 | 7.88e-36 | 131 |
| MS.gene24924.t1 | AT2G33820 | 26.578 | 301 | 197 | 7 | 14 | 292 | 16 | 314 | 1.09e-33 | 125 |
| MS.gene24924.t1 | AT1G34065 | 29.329 | 283 | 169 | 7 | 14 | 292 | 73 | 328 | 5.47e-26 | 105 |
| MS.gene24924.t1 | AT1G34065 | 28.421 | 285 | 169 | 7 | 14 | 292 | 80 | 335 | 5.90e-26 | 105 |
| MS.gene24924.t1 | AT4G11440 | 32.028 | 281 | 172 | 9 | 14 | 286 | 328 | 597 | 1.03e-25 | 107 |
| MS.gene24924.t1 | AT4G11440 | 32.028 | 281 | 172 | 9 | 14 | 286 | 328 | 597 | 1.03e-25 | 107 |
| MS.gene24924.t1 | AT2G33820 | 26.667 | 225 | 155 | 4 | 76 | 292 | 3 | 225 | 1.23e-25 | 102 |
| MS.gene24924.t1 | AT4G39460 | 28.966 | 290 | 179 | 8 | 16 | 303 | 58 | 322 | 1.41e-24 | 101 |
| MS.gene24924.t1 | AT4G39460 | 28.966 | 290 | 179 | 8 | 16 | 303 | 58 | 322 | 1.41e-24 | 101 |
| MS.gene24924.t1 | AT4G39460 | 28.966 | 290 | 179 | 8 | 16 | 303 | 58 | 322 | 1.41e-24 | 101 |
| MS.gene24924.t1 | AT5G01340 | 30.976 | 297 | 178 | 11 | 17 | 294 | 18 | 306 | 2.33e-24 | 100 |
| MS.gene24924.t1 | AT5G01340 | 29.767 | 215 | 120 | 7 | 97 | 297 | 5 | 202 | 1.67e-12 | 67.4 |
| MS.gene24924.t1 | AT5G19760 | 26.667 | 300 | 192 | 7 | 14 | 304 | 16 | 296 | 3.00e-24 | 100 |
| MS.gene24924.t1 | AT2G33820 | 25.641 | 234 | 157 | 5 | 14 | 231 | 16 | 248 | 1.48e-23 | 97.8 |
| MS.gene24924.t1 | AT4G01100 | 33.333 | 225 | 131 | 8 | 88 | 297 | 12 | 232 | 8.42e-23 | 97.1 |
| MS.gene24924.t1 | AT4G01100 | 24.214 | 318 | 207 | 8 | 5 | 292 | 31 | 344 | 1.99e-19 | 87.8 |
| MS.gene24924.t1 | AT1G25380 | 28.417 | 278 | 174 | 7 | 32 | 292 | 37 | 306 | 1.28e-22 | 96.7 |
| MS.gene24924.t1 | AT1G25380 | 28.417 | 278 | 174 | 7 | 32 | 292 | 37 | 306 | 1.28e-22 | 96.7 |
| MS.gene24924.t1 | AT4G01100 | 31.381 | 239 | 131 | 8 | 88 | 297 | 12 | 246 | 3.26e-22 | 95.5 |
| MS.gene24924.t1 | AT4G01100 | 23.242 | 327 | 203 | 8 | 5 | 287 | 31 | 353 | 6.87e-19 | 86.3 |
| MS.gene24924.t1 | AT4G01100 | 35.000 | 180 | 108 | 5 | 124 | 297 | 6 | 182 | 7.93e-21 | 90.9 |
| MS.gene24924.t1 | AT4G01100 | 25.287 | 261 | 165 | 7 | 53 | 287 | 33 | 289 | 1.17e-17 | 82.0 |
| MS.gene24924.t1 | AT5G42130 | 27.719 | 285 | 176 | 10 | 32 | 302 | 134 | 402 | 9.46e-21 | 92.0 |
| MS.gene24924.t1 | AT4G32400 | 24.138 | 290 | 213 | 4 | 8 | 296 | 106 | 389 | 1.06e-20 | 91.7 |
| MS.gene24924.t1 | AT3G20240 | 25.246 | 305 | 191 | 5 | 6 | 286 | 42 | 333 | 1.08e-20 | 91.3 |
| MS.gene24924.t1 | AT2G47490 | 29.225 | 284 | 168 | 11 | 32 | 295 | 33 | 303 | 2.04e-20 | 89.7 |
| MS.gene24924.t1 | AT1G74240 | 29.126 | 309 | 185 | 8 | 14 | 295 | 34 | 335 | 3.34e-20 | 90.1 |
| MS.gene24924.t1 | AT1G14140 | 25.098 | 255 | 175 | 6 | 31 | 273 | 31 | 281 | 6.34e-20 | 88.6 |
| MS.gene24924.t1 | AT1G14140 | 27.830 | 212 | 141 | 6 | 94 | 296 | 1 | 209 | 3.53e-15 | 75.1 |
| MS.gene24924.t1 | AT5G51050 | 24.825 | 286 | 205 | 6 | 5 | 286 | 210 | 489 | 1.87e-19 | 89.0 |
| MS.gene24924.t1 | AT5G61810 | 25.830 | 271 | 178 | 8 | 5 | 267 | 52 | 307 | 1.35e-18 | 85.1 |
| MS.gene24924.t1 | AT5G61810 | 28.272 | 191 | 120 | 7 | 11 | 194 | 152 | 332 | 3.65e-11 | 63.5 |
| MS.gene24924.t1 | AT4G26180 | 25.510 | 294 | 193 | 9 | 13 | 287 | 18 | 304 | 1.83e-18 | 84.7 |
| MS.gene24924.t1 | AT4G26180 | 30.256 | 195 | 120 | 4 | 104 | 286 | 15 | 205 | 2.50e-16 | 78.6 |
| MS.gene24924.t1 | AT4G26180 | 26.374 | 273 | 175 | 9 | 14 | 267 | 19 | 284 | 2.68e-18 | 83.6 |
| MS.gene24924.t1 | AT4G26180 | 30.256 | 195 | 120 | 4 | 104 | 286 | 15 | 205 | 1.50e-16 | 78.6 |
| MS.gene24924.t1 | AT4G03115 | 28.395 | 243 | 155 | 8 | 31 | 266 | 53 | 283 | 3.49e-18 | 83.6 |
| MS.gene24924.t1 | AT4G03115 | 28.000 | 200 | 131 | 6 | 103 | 299 | 29 | 218 | 6.55e-13 | 68.6 |
| MS.gene24924.t1 | AT4G03115 | 28.395 | 243 | 155 | 8 | 31 | 266 | 85 | 315 | 5.55e-18 | 83.6 |
| MS.gene24924.t1 | AT4G03115 | 28.000 | 200 | 131 | 6 | 103 | 299 | 61 | 250 | 9.02e-13 | 68.2 |
| MS.gene24924.t1 | AT5G61810 | 25.830 | 271 | 178 | 8 | 5 | 267 | 195 | 450 | 7.32e-18 | 84.0 |
| MS.gene24924.t1 | AT5G61810 | 28.272 | 191 | 120 | 7 | 11 | 194 | 295 | 475 | 4.82e-11 | 63.5 |
| MS.gene24924.t1 | AT1G72820 | 24.127 | 315 | 204 | 7 | 16 | 297 | 31 | 343 | 1.74e-17 | 82.0 |
| MS.gene24924.t1 | AT1G72820 | 24.127 | 315 | 204 | 7 | 16 | 297 | 31 | 343 | 1.74e-17 | 82.0 |
| MS.gene24924.t1 | AT1G74240 | 28.425 | 292 | 175 | 8 | 31 | 295 | 3 | 287 | 2.68e-17 | 81.3 |
| MS.gene24924.t1 | AT3G54110 | 25.185 | 270 | 176 | 8 | 14 | 267 | 13 | 272 | 8.24e-17 | 79.7 |
| MS.gene24924.t1 | AT3G54110 | 30.319 | 188 | 108 | 5 | 126 | 304 | 31 | 204 | 8.00e-15 | 73.9 |
| MS.gene24924.t1 | AT2G37890 | 29.592 | 196 | 129 | 5 | 6 | 194 | 139 | 332 | 1.23e-16 | 79.7 |
| MS.gene24924.t1 | AT2G37890 | 25.497 | 302 | 190 | 9 | 14 | 292 | 43 | 332 | 1.55e-15 | 76.3 |
| MS.gene24924.t1 | AT2G37890 | 30.729 | 192 | 118 | 8 | 105 | 286 | 41 | 227 | 1.07e-14 | 73.9 |
| MS.gene24924.t1 | AT1G14560 | 25.180 | 278 | 179 | 8 | 32 | 286 | 43 | 314 | 3.75e-16 | 78.2 |
| MS.gene24924.t1 | AT1G14560 | 27.119 | 177 | 111 | 4 | 124 | 286 | 41 | 213 | 4.78e-11 | 63.2 |
| MS.gene24924.t1 | AT5G58970 | 24.342 | 304 | 197 | 9 | 2 | 286 | 3 | 292 | 4.35e-16 | 77.4 |
| MS.gene24924.t1 | AT1G14560 | 25.869 | 259 | 163 | 8 | 32 | 267 | 43 | 295 | 5.30e-16 | 77.4 |
| MS.gene24924.t1 | AT3G55640 | 31.282 | 195 | 128 | 4 | 1 | 191 | 130 | 322 | 8.08e-16 | 77.0 |
| MS.gene24924.t1 | AT3G55640 | 27.869 | 183 | 124 | 3 | 111 | 286 | 39 | 220 | 3.07e-15 | 75.5 |
| MS.gene24924.t1 | AT3G55640 | 31.282 | 195 | 128 | 4 | 1 | 191 | 130 | 322 | 8.08e-16 | 77.0 |
| MS.gene24924.t1 | AT3G55640 | 27.869 | 183 | 124 | 3 | 111 | 286 | 39 | 220 | 3.07e-15 | 75.5 |
| MS.gene24924.t1 | AT5G66380 | 26.689 | 296 | 189 | 10 | 18 | 292 | 12 | 300 | 8.77e-16 | 76.6 |
| MS.gene24924.t1 | AT3G55640 | 27.869 | 183 | 124 | 3 | 111 | 286 | 39 | 220 | 1.00e-15 | 75.9 |
| MS.gene24924.t1 | AT3G55640 | 27.869 | 183 | 124 | 3 | 111 | 286 | 39 | 220 | 1.00e-15 | 75.9 |
| MS.gene24924.t1 | AT4G03115 | 28.139 | 231 | 149 | 7 | 41 | 266 | 2 | 220 | 1.15e-15 | 75.5 |
| MS.gene24924.t1 | AT3G53940 | 30.108 | 186 | 120 | 5 | 15 | 194 | 179 | 360 | 1.19e-15 | 77.0 |
| MS.gene24924.t1 | AT3G53940 | 29.787 | 188 | 114 | 4 | 111 | 286 | 74 | 255 | 4.90e-15 | 75.1 |
| MS.gene24924.t1 | AT4G03115 | 28.111 | 217 | 142 | 6 | 52 | 266 | 8 | 212 | 1.69e-15 | 75.1 |
| MS.gene24924.t1 | AT3G53940 | 29.787 | 188 | 114 | 4 | 111 | 286 | 74 | 255 | 2.23e-15 | 75.5 |
| MS.gene24924.t1 | AT4G24570 | 24.916 | 297 | 177 | 8 | 14 | 273 | 4 | 291 | 6.90e-15 | 74.3 |
| MS.gene24924.t1 | AT4G24570 | 27.805 | 205 | 110 | 6 | 117 | 286 | 9 | 210 | 2.02e-12 | 67.0 |
| MS.gene24924.t1 | AT5G07320 | 24.727 | 275 | 194 | 5 | 14 | 286 | 207 | 470 | 3.31e-14 | 73.2 |
| MS.gene24924.t1 | AT5G07320 | 26.702 | 191 | 123 | 5 | 11 | 194 | 296 | 476 | 6.27e-13 | 69.3 |
| MS.gene24924.t1 | AT5G07320 | 29.167 | 168 | 109 | 4 | 125 | 292 | 224 | 381 | 8.42e-13 | 68.9 |
| MS.gene24924.t1 | AT1G07030 | 27.962 | 211 | 140 | 5 | 94 | 302 | 25 | 225 | 4.36e-14 | 72.0 |
| MS.gene24924.t1 | AT1G07030 | 26.148 | 283 | 175 | 9 | 2 | 266 | 24 | 290 | 1.66e-11 | 64.3 |
| MS.gene24924.t1 | AT5G58970 | 28.723 | 188 | 112 | 5 | 126 | 304 | 32 | 206 | 6.49e-14 | 70.9 |
| MS.gene24924.t1 | AT1G14560 | 26.667 | 195 | 120 | 5 | 111 | 286 | 26 | 216 | 2.18e-13 | 68.9 |
| MS.gene24924.t1 | AT4G03115 | 28.000 | 200 | 131 | 6 | 103 | 299 | 29 | 218 | 2.65e-13 | 68.6 |
| MS.gene24924.t1 | AT4G03115 | 28.000 | 200 | 131 | 6 | 103 | 299 | 29 | 218 | 2.94e-13 | 68.2 |
| MS.gene24924.t1 | AT5G13490 | 28.750 | 160 | 104 | 3 | 133 | 286 | 214 | 369 | 3.09e-13 | 70.1 |
| MS.gene24924.t1 | AT5G13490 | 28.750 | 160 | 104 | 3 | 133 | 286 | 214 | 369 | 3.09e-13 | 70.1 |
| MS.gene24924.t1 | AT5G09470 | 28.662 | 157 | 106 | 2 | 134 | 286 | 77 | 231 | 3.39e-13 | 69.7 |
| MS.gene24924.t1 | AT5G09470 | 24.891 | 229 | 163 | 5 | 48 | 273 | 91 | 313 | 1.71e-11 | 64.3 |
| MS.gene24924.t1 | AT2G39970 | 24.242 | 297 | 180 | 9 | 31 | 286 | 23 | 315 | 4.13e-13 | 69.3 |
| MS.gene24924.t1 | AT5G15640 | 23.297 | 279 | 182 | 9 | 14 | 268 | 18 | 288 | 4.39e-13 | 68.9 |
| MS.gene24924.t1 | AT5G15640 | 23.297 | 279 | 182 | 9 | 14 | 268 | 25 | 295 | 4.83e-13 | 68.9 |
| MS.gene24924.t1 | AT2G30160 | 27.473 | 182 | 123 | 3 | 111 | 292 | 43 | 215 | 1.84e-12 | 67.4 |
| MS.gene24924.t1 | AT2G46320 | 24.561 | 228 | 125 | 6 | 110 | 290 | 25 | 252 | 3.74e-12 | 66.6 |
| MS.gene24924.t1 | AT2G46320 | 28.767 | 146 | 96 | 3 | 153 | 290 | 8 | 153 | 3.87e-12 | 65.1 |
| MS.gene24924.t1 | AT5G48970 | 25.238 | 210 | 139 | 4 | 110 | 304 | 22 | 228 | 5.13e-12 | 66.2 |
| MS.gene24924.t1 | AT5G48970 | 24.224 | 322 | 183 | 9 | 23 | 292 | 22 | 334 | 1.19e-11 | 65.1 |
| MS.gene24924.t1 | AT2G46320 | 28.767 | 146 | 96 | 3 | 153 | 290 | 8 | 153 | 5.14e-12 | 65.5 |
| MS.gene24924.t1 | AT2G46320 | 28.767 | 146 | 96 | 3 | 153 | 290 | 8 | 153 | 5.14e-12 | 65.5 |
| MS.gene24924.t1 | AT2G46320 | 28.767 | 146 | 96 | 3 | 153 | 290 | 8 | 153 | 5.14e-12 | 65.5 |
| MS.gene24924.t1 | AT3G21390 | 27.419 | 186 | 123 | 4 | 117 | 291 | 26 | 210 | 1.21e-11 | 65.1 |
| MS.gene24924.t1 | AT3G21390 | 23.364 | 321 | 190 | 10 | 14 | 287 | 14 | 325 | 2.54e-11 | 63.9 |
| MS.gene24924.t1 | AT3G51870 | 23.792 | 269 | 184 | 7 | 36 | 302 | 120 | 369 | 1.30e-11 | 65.1 |
| MS.gene24924.t1 | AT5G56450 | 23.000 | 200 | 140 | 5 | 111 | 297 | 35 | 233 | 1.33e-11 | 64.7 |
| MS.gene24924.t1 | AT3G21390 | 27.419 | 186 | 123 | 4 | 117 | 291 | 48 | 232 | 1.62e-11 | 64.7 |
| MS.gene24924.t1 | AT3G21390 | 23.364 | 321 | 190 | 10 | 14 | 287 | 36 | 347 | 2.96e-11 | 63.9 |
| MS.gene24924.t1 | AT2G22500 | 22.727 | 308 | 198 | 8 | 22 | 295 | 9 | 310 | 3.77e-11 | 63.2 |
| MS.gene24924.t1 | AT5G64970 | 27.222 | 180 | 107 | 5 | 32 | 191 | 120 | 295 | 4.10e-11 | 63.2 |
Find 68 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTAAAAGCAGAACCATTT+TGG | 0.220455 | 4.3:+84480519 | None:intergenic |
| GGCACTGCTGGTATAATTTC+TGG | 0.229075 | 4.3:-84480584 | MS.gene24924:CDS |
| GTAAGGATAGAATGGATTTC+TGG | 0.274280 | 4.3:-84480661 | None:intergenic |
| GAATTTGTGGCTGGTGGATT+TGG | 0.305163 | 4.3:-84480608 | MS.gene24924:CDS |
| CTTTAGACAACATTTGTCTA+AGG | 0.317894 | 4.3:+84480495 | None:intergenic |
| TATAATTTCTGGTTATCCTT+TGG | 0.324296 | 4.3:-84480573 | MS.gene24924:CDS |
| CAACAAAGTGGTGGCCAAAA+TGG | 0.330381 | 4.3:-84480533 | MS.gene24924:CDS |
| GAGTTTCTTGCAAGTAGTTC+AGG | 0.334182 | 4.3:-84480635 | MS.gene24924:CDS |
| ATTAGCAGGGGTGGCGAGTT+GGG | 0.336983 | 4.3:-84478706 | MS.gene24924:CDS |
| CTCGTCTTCACAACATCAAA+AGG | 0.383330 | 4.3:+84478672 | None:intergenic |
| GCCTAATGCAACACTCTTGT+AGG | 0.397929 | 4.3:+84479034 | None:intergenic |
| TTGGTGTCTGGAGGATTAGC+AGG | 0.401792 | 4.3:-84478720 | MS.gene24924:CDS |
| GGTGGATTTGGAGGCACTGC+TGG | 0.406098 | 4.3:-84480596 | MS.gene24924:CDS |
| GCCAGAGCATTTGTTGTGAA+TGG | 0.409963 | 4.3:-84478534 | MS.gene24924:CDS |
| ACAAACCAGTCAAAAGAATC+TGG | 0.411503 | 4.3:-84478933 | MS.gene24924:CDS |
| AGACAAATGTTGTCTAAAGA+AGG | 0.414361 | 4.3:-84480491 | MS.gene24924:CDS |
| GATTAGCAGGGGTGGCGAGT+TGG | 0.433393 | 4.3:-84478707 | MS.gene24924:CDS |
| CGCGGCATATATCGAGGACT+TGG | 0.435598 | 4.3:-84478861 | MS.gene24924:CDS |
| CCTGTGTTGTGGCGTGGTTT+AGG | 0.444672 | 4.3:-84478567 | MS.gene24924:CDS |
| TTGTTCTTTGTACCGTGGCA+TGG | 0.446647 | 4.3:-84480465 | MS.gene24924:CDS |
| TTGAATACTATGTTGGTGTC+TGG | 0.453435 | 4.3:-84478732 | MS.gene24924:CDS |
| TAGTTCAGGTAGAGAATTTG+TGG | 0.458521 | 4.3:-84480621 | MS.gene24924:CDS |
| GAGTGTTGCATTAGGCGGAA+TGG | 0.463700 | 4.3:-84479027 | MS.gene24924:CDS |
| AGTGTTGCATTAGGCGGAAT+GGG | 0.466863 | 4.3:-84479026 | MS.gene24924:CDS |
| CAATGAAAACGTTCAAATGC+AGG | 0.490208 | 4.3:-84478466 | MS.gene24924:CDS |
| TGAAAAGTAACTGATGCTAA+TGG | 0.501788 | 4.3:+84480437 | None:intergenic |
| TGTTCTTTGTACCGTGGCAT+GGG | 0.502148 | 4.3:-84480464 | MS.gene24924:CDS |
| GGTAGAGAATTTGTGGCTGG+TGG | 0.502758 | 4.3:-84480614 | MS.gene24924:CDS |
| AGAAAGTTTGAATACTATGT+TGG | 0.504957 | 4.3:-84478739 | MS.gene24924:CDS |
| AAACATATGCAGTTCTCTCA+AGG | 0.505854 | 4.3:-84479094 | MS.gene24924:CDS |
| TCCTACAAGAGTGTTGCATT+AGG | 0.508226 | 4.3:-84479035 | MS.gene24924:CDS |
| AAGTTTATTGCTTTCACCAG+TGG | 0.509839 | 4.3:-84478988 | MS.gene24924:CDS |
| ACCATTCACAACAAATGCTC+TGG | 0.512219 | 4.3:+84478533 | None:intergenic |
| ACGAAAAGCGTAAGAGAAGA+AGG | 0.514936 | 4.3:-84478594 | MS.gene24924:CDS |
| GAACTACTTGCAAGAAACTC+TGG | 0.529528 | 4.3:+84480638 | None:intergenic |
| GGATCTTTAGCAGAATCAGA+TGG | 0.534644 | 4.3:+84479062 | None:intergenic |
| TTTGTGGCTGGTGGATTTGG+AGG | 0.542646 | 4.3:-84480605 | MS.gene24924:CDS |
| ATGAGGGATGTACCTTCTCA+TGG | 0.544584 | 4.3:-84478828 | MS.gene24924:CDS |
| GCATTAGGCGGAATGGGCAC+AGG | 0.549467 | 4.3:-84479020 | MS.gene24924:CDS |
| TCAGGTAGAGAATTTGTGGC+TGG | 0.550186 | 4.3:-84480617 | MS.gene24924:CDS |
| GTCTGGAGGATTAGCAGGGG+TGG | 0.562947 | 4.3:-84478715 | MS.gene24924:CDS |
| CCTAAACCACGCCACAACAC+AGG | 0.571265 | 4.3:+84478567 | None:intergenic |
| GACTTGGCATCACTATAATG+AGG | 0.581438 | 4.3:-84478845 | MS.gene24924:CDS |
| TGGTGTCTGGAGGATTAGCA+GGG | 0.581439 | 4.3:-84478719 | MS.gene24924:CDS |
| AACATATGCAGTTCTCTCAA+GGG | 0.587290 | 4.3:-84479093 | MS.gene24924:CDS |
| TCGTCTTCACAACATCAAAA+GGG | 0.593439 | 4.3:+84478673 | None:intergenic |
| AATGCAACACTCTTGTAGGA+TGG | 0.595216 | 4.3:+84479038 | None:intergenic |
| TACAAGAGTGTTGCATTAGG+CGG | 0.595968 | 4.3:-84479032 | MS.gene24924:CDS |
| CTAAACCACGCCACAACACA+GGG | 0.602372 | 4.3:+84478568 | None:intergenic |
| GATCTTTAGCAGAATCAGAT+GGG | 0.611273 | 4.3:+84479063 | None:intergenic |
| AATACTATGTTGGTGTCTGG+AGG | 0.616080 | 4.3:-84478729 | MS.gene24924:CDS |
| CCTTCTGCTATAAAATACAA+AGG | 0.619453 | 4.3:-84478633 | MS.gene24924:CDS |
| AAGAAGGATACCCTGTGTTG+TGG | 0.621789 | 4.3:-84478578 | MS.gene24924:CDS |
| CTAATGGTGCACCCATGCCA+CGG | 0.621860 | 4.3:+84480453 | None:intergenic |
| TCTGGACATATGAATACATG+AGG | 0.629048 | 4.3:-84478797 | MS.gene24924:CDS |
| GCAACACTCTTGTAGGATGG+AGG | 0.631532 | 4.3:+84479041 | None:intergenic |
| TTAGGCGGAATGGGCACAGG+AGG | 0.638617 | 4.3:-84479017 | MS.gene24924:CDS |
| GGATACCCTGTGTTGTGGCG+TGG | 0.642104 | 4.3:-84478573 | MS.gene24924:CDS |
| ACTTGGCATCACTATAATGA+GGG | 0.644476 | 4.3:-84478844 | MS.gene24924:CDS |
| CTTAGAATCAGACAACAAAG+TGG | 0.668062 | 4.3:-84480545 | MS.gene24924:CDS |
| TGGAGAAAAGAGGGTTTGCG+CGG | 0.668379 | 4.3:-84478879 | MS.gene24924:CDS |
| AGAATCAGACAACAAAGTGG+TGG | 0.674748 | 4.3:-84480542 | MS.gene24924:CDS |
| CTGATTCTAAGAGTATCCAA+AGG | 0.682126 | 4.3:+84480557 | None:intergenic |
| GGTGTCTGGAGGATTAGCAG+GGG | 0.685628 | 4.3:-84478718 | MS.gene24924:CDS |
| GGTTTGCGCGGCATATATCG+AGG | 0.692095 | 4.3:-84478867 | MS.gene24924:CDS |
| CTGGACATATGAATACATGA+GGG | 0.692763 | 4.3:-84478796 | MS.gene24924:CDS |
| GTGGCGTGGTTTAGGAACTG+CGG | 0.699559 | 4.3:-84478559 | MS.gene24924:CDS |
| CTGCTTATGAGATTACACTG+AGG | 0.757246 | 4.3:-84478500 | MS.gene24924:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTATTGCTTTTTTTAAT+TGG | - | chr4.3:84479121-84479140 | MS.gene24924:intron | 10.0% |
| !! | AAGAATATTTATAATTACCT+AGG | - | chr4.3:84479510-84479529 | MS.gene24924:intron | 15.0% |
| !! | TAATTATAAATATTCTTTGC+TGG | + | chr4.3:84479507-84479526 | None:intergenic | 15.0% |
| !! | ACGAAAATTGTCTAAATATT+TGG | - | chr4.3:84479815-84479834 | MS.gene24924:intron | 20.0% |
| !! | ATATTTAATATTGCTTGAGT+TGG | + | chr4.3:84479291-84479310 | None:intergenic | 20.0% |
| !! | ATATTTGTGTAAACTCATAT+TGG | - | chr4.3:84479188-84479207 | MS.gene24924:intron | 20.0% |
| !! | ATGCTATGATTTATTGTTTA+TGG | - | chr4.3:84478764-84478783 | MS.gene24924:CDS | 20.0% |
| !! | ATTAGGATTAGATTAAGATT+AGG | - | chr4.3:84479240-84479259 | MS.gene24924:intron | 20.0% |
| !! | ATTTGTTTAGATAAAGGATT+AGG | - | chr4.3:84479223-84479242 | MS.gene24924:intron | 20.0% |
| !! | TAAAAGTAGCTAAAAACATA+TGG | - | chr4.3:84480206-84480225 | MS.gene24924:intron | 20.0% |
| !!! | AAATATTTAGACAATTTTCG+TGG | + | chr4.3:84479816-84479835 | None:intergenic | 20.0% |
| !!! | ATTTGTTTATCTTCGTTTTT+CGG | - | chr4.3:84479966-84479985 | MS.gene24924:intron | 20.0% |
| !!! | ATTTTAATGTCATAATCACA+AGG | + | chr4.3:84479475-84479494 | None:intergenic | 20.0% |
| !!! | CTTTTGATTTGTTTAGATAA+AGG | - | chr4.3:84479217-84479236 | MS.gene24924:intron | 20.0% |
| !!! | TTTTAATGTCATAATCACAA+GGG | + | chr4.3:84479474-84479493 | None:intergenic | 20.0% |
| ! | AAAAACATATGGAGAAAAGA+GGG | - | chr4.3:84480217-84480236 | MS.gene24924:intron | 25.0% |
| ! | AGAAAGTTTGAATACTATGT+TGG | - | chr4.3:84480366-84480385 | MS.gene24924:intron | 25.0% |
| ! | ATGAGAAGAAAAGAAAAAAG+TGG | - | chr4.3:84479052-84479071 | MS.gene24924:CDS | 25.0% |
| ! | CACTTTAATATCTCATATGA+AGG | + | chr4.3:84479920-84479939 | None:intergenic | 25.0% |
| ! | TAAAAACATATGGAGAAAAG+AGG | - | chr4.3:84480216-84480235 | MS.gene24924:intron | 25.0% |
| ! | TATCTACATATGAAGTTTGT+GGG | - | chr4.3:84479679-84479698 | MS.gene24924:intron | 25.0% |
| ! | TATTGCAACAATCAAAGAAA+TGG | - | chr4.3:84479741-84479760 | MS.gene24924:intron | 25.0% |
| ! | TCTCATATGAAGGAATAATA+TGG | + | chr4.3:84479910-84479929 | None:intergenic | 25.0% |
| ! | TGAAATAGAATTGATCTATG+TGG | + | chr4.3:84479850-84479869 | None:intergenic | 25.0% |
| ! | TTATCTACATATGAAGTTTG+TGG | - | chr4.3:84479678-84479697 | MS.gene24924:intron | 25.0% |
| !!! | ATGTTTTTAGCTACTTTTAC+AGG | + | chr4.3:84480205-84480224 | None:intergenic | 25.0% |
| !!! | TATAATTTCTGGTTATCCTT+TGG | - | chr4.3:84478532-84478551 | MS.gene24924:CDS | 25.0% |
| AAAAAAGTGGCTGATATGAT+AGG | - | chr4.3:84479065-84479084 | MS.gene24924:CDS | 30.0% | |
| AGACAAATGTTGTCTAAAGA+AGG | - | chr4.3:84478614-84478633 | MS.gene24924:CDS | 30.0% | |
| AGTATAGGATTCATGTGAAT+AGG | - | chr4.3:84478893-84478912 | MS.gene24924:CDS | 30.0% | |
| ATCATCACAAATTGCAGTAT+AGG | - | chr4.3:84478878-84478897 | MS.gene24924:CDS | 30.0% | |
| CCTTCTGCTATAAAATACAA+AGG | - | chr4.3:84480472-84480491 | MS.gene24924:CDS | 30.0% | |
| CTTTAGACAACATTTGTCTA+AGG | + | chr4.3:84478613-84478632 | None:intergenic | 30.0% | |
| TCTAATTGAATGTACATCCT+AGG | + | chr4.3:84479530-84479549 | None:intergenic | 30.0% | |
| TGAAAAGTAACTGATGCTAA+TGG | + | chr4.3:84478671-84478690 | None:intergenic | 30.0% | |
| ! | AACAGTGCTTTTGTATATTC+TGG | - | chr4.3:84479600-84479619 | MS.gene24924:intron | 30.0% |
| ! | ACAGTGCTTTTGTATATTCT+GGG | - | chr4.3:84479601-84479620 | MS.gene24924:intron | 30.0% |
| ! | CCTTTGTATTTTATAGCAGA+AGG | + | chr4.3:84480475-84480494 | None:intergenic | 30.0% |
| ! | GAACGTTTTCATTGTTAAAC+AGG | + | chr4.3:84480633-84480652 | None:intergenic | 30.0% |
| ! | TAAATATTTTCACATGAGCC+AGG | - | chr4.3:84479304-84479323 | MS.gene24924:intron | 30.0% |
| ! | TGTTAAAAGCAGAACCATTT+TGG | + | chr4.3:84478589-84478608 | None:intergenic | 30.0% |
| !! | ATATTGCTTGAGTTGGAAAA+AGG | + | chr4.3:84479284-84479303 | None:intergenic | 30.0% |
| !!! | ATTAGCATCAGTTACTTTTC+AGG | - | chr4.3:84478670-84478689 | MS.gene24924:CDS | 30.0% |
| AAAACATCCTTTGCCATCTT+TGG | - | chr4.3:84478993-84479012 | MS.gene24924:CDS | 35.0% | |
| AAAACTGTACGACTGTTACA+TGG | - | chr4.3:84479383-84479402 | MS.gene24924:intron | 35.0% | |
| AAACATATGCAGTTCTCTCA+AGG | - | chr4.3:84480011-84480030 | MS.gene24924:intron | 35.0% | |
| AAACTGTACGACTGTTACAT+GGG | - | chr4.3:84479384-84479403 | MS.gene24924:intron | 35.0% | |
| AACATATGCAGTTCTCTCAA+GGG | - | chr4.3:84480012-84480031 | MS.gene24924:intron | 35.0% | |
| AAGTTTATTGCTTTCACCAG+TGG | - | chr4.3:84480117-84480136 | MS.gene24924:intron | 35.0% | |
| AATAGCCTTTGAATGCCTTA+TGG | + | chr4.3:84479725-84479744 | None:intergenic | 35.0% | |
| ACAAACCAGTCAAAAGAATC+TGG | - | chr4.3:84480172-84480191 | MS.gene24924:intron | 35.0% | |
| ACTGTATCCATACCATAGTA+GGG | + | chr4.3:84479347-84479366 | None:intergenic | 35.0% | |
| ACTTGGCATCACTATAATGA+GGG | - | chr4.3:84480261-84480280 | MS.gene24924:intron | 35.0% | |
| ATCCGGCATAAATCATCAAT+TGG | - | chr4.3:84478806-84478825 | MS.gene24924:CDS | 35.0% | |
| CAATGAAAACGTTCAAATGC+AGG | - | chr4.3:84480639-84480658 | MS.gene24924:CDS | 35.0% | |
| CACTGTTCATGTCATTGTAT+TGG | + | chr4.3:84479587-84479606 | None:intergenic | 35.0% | |
| CAGAAGTAAAAACCATGAGA+AGG | + | chr4.3:84480292-84480311 | None:intergenic | 35.0% | |
| CTGGACATATGAATACATGA+GGG | - | chr4.3:84480309-84480328 | MS.gene24924:intron | 35.0% | |
| CTTAGAATCAGACAACAAAG+TGG | - | chr4.3:84478560-84478579 | MS.gene24924:CDS | 35.0% | |
| GAACATCAAGAATCCAAAGA+TGG | + | chr4.3:84479009-84479028 | None:intergenic | 35.0% | |
| GATCTTTAGCAGAATCAGAT+GGG | + | chr4.3:84480045-84480064 | None:intergenic | 35.0% | |
| TACTGTATCCATACCATAGT+AGG | + | chr4.3:84479348-84479367 | None:intergenic | 35.0% | |
| TAGTTCAGGTAGAGAATTTG+TGG | - | chr4.3:84478484-84478503 | MS.gene24924:CDS | 35.0% | |
| TCCGGCATAAATCATCAATT+GGG | - | chr4.3:84478807-84478826 | MS.gene24924:CDS | 35.0% | |
| TCGTCTTCACAACATCAAAA+GGG | + | chr4.3:84480435-84480454 | None:intergenic | 35.0% | |
| TCTGGACATATGAATACATG+AGG | - | chr4.3:84480308-84480327 | MS.gene24924:intron | 35.0% | |
| ! | ACCCAATTGATGATTTATGC+CGG | + | chr4.3:84478811-84478830 | None:intergenic | 35.0% |
| ! | ATAGGAATCGGTTGTGATTT+TGG | - | chr4.3:84479083-84479102 | MS.gene24924:CDS | 35.0% |
| ! | ATGTCATTGTATTGGTAGGT+GGG | + | chr4.3:84479579-84479598 | None:intergenic | 35.0% |
| ! | CTTCTCATGGTTTTTACTTC+TGG | - | chr4.3:84480290-84480309 | MS.gene24924:intron | 35.0% |
| ! | GCTTTTGTATATTCTGGGTA+TGG | - | chr4.3:84479606-84479625 | MS.gene24924:intron | 35.0% |
| ! | GTTCATGTCATTGTATTGGT+AGG | + | chr4.3:84479583-84479602 | None:intergenic | 35.0% |
| ! | TAGGAATCGGTTGTGATTTT+GGG | - | chr4.3:84479084-84479103 | MS.gene24924:CDS | 35.0% |
| ! | TATAGCCATAAGGCATTCAA+AGG | - | chr4.3:84479717-84479736 | MS.gene24924:intron | 35.0% |
| ! | TTGAATACTATGTTGGTGTC+TGG | - | chr4.3:84480373-84480392 | MS.gene24924:intron | 35.0% |
| ! | TTGTTCCAGATTCTTTTGAC+TGG | + | chr4.3:84480180-84480199 | None:intergenic | 35.0% |
| !! | CTGATTCTAAGAGTATCCAA+AGG | + | chr4.3:84478551-84478570 | None:intergenic | 35.0% |
| !! | TGTTTATCTTCGTTTTTCGG+TGG | - | chr4.3:84479969-84479988 | MS.gene24924:intron | 35.0% |
| AATGCAACACTCTTGTAGGA+TGG | + | chr4.3:84480070-84480089 | None:intergenic | 40.0% | |
| ACCATTCACAACAAATGCTC+TGG | + | chr4.3:84480575-84480594 | None:intergenic | 40.0% | |
| AGAATCAGACAACAAAGTGG+TGG | - | chr4.3:84478563-84478582 | MS.gene24924:CDS | 40.0% | |
| ATGAGGGAAAAATTGCATCC+AGG | - | chr4.3:84480325-84480344 | MS.gene24924:intron | 40.0% | |
| CAAGAATCCAAAGATGGCAA+AGG | + | chr4.3:84479003-84479022 | None:intergenic | 40.0% | |
| CATCCAGGTTGTAGAAAAAG+TGG | - | chr4.3:84480340-84480359 | MS.gene24924:intron | 40.0% | |
| CTCGTCTTCACAACATCAAA+AGG | + | chr4.3:84480436-84480455 | None:intergenic | 40.0% | |
| CTGCTTATGAGATTACACTG+AGG | - | chr4.3:84480605-84480624 | MS.gene24924:CDS | 40.0% | |
| CTGGGTTATGTATAGCCATA+AGG | - | chr4.3:84479707-84479726 | MS.gene24924:intron | 40.0% | |
| CTGTATCCATACCATAGTAG+GGG | + | chr4.3:84479346-84479365 | None:intergenic | 40.0% | |
| GAACTACTTGCAAGAAACTC+TGG | + | chr4.3:84478470-84478489 | None:intergenic | 40.0% | |
| GAATCACATTCACATCACAC+AGG | + | chr4.3:84479410-84479429 | None:intergenic | 40.0% | |
| GACTTGGCATCACTATAATG+AGG | - | chr4.3:84480260-84480279 | MS.gene24924:intron | 40.0% | |
| GAGTTTCTTGCAAGTAGTTC+AGG | - | chr4.3:84478470-84478489 | MS.gene24924:CDS | 40.0% | |
| GGATCTTTAGCAGAATCAGA+TGG | + | chr4.3:84480046-84480065 | None:intergenic | 40.0% | |
| GTGGCTGATATGATAGGAAT+CGG | - | chr4.3:84479071-84479090 | MS.gene24924:CDS | 40.0% | |
| TATGGCTATACATAACCCAG+TGG | + | chr4.3:84479707-84479726 | None:intergenic | 40.0% | |
| TCAACATGATGTTGCATGTG+TGG | - | chr4.3:84478960-84478979 | MS.gene24924:CDS | 40.0% | |
| ! | AATACTATGTTGGTGTCTGG+AGG | - | chr4.3:84480376-84480395 | MS.gene24924:intron | 40.0% |
| ! | ACGAAAAGCGTAAGAGAAGA+AGG | - | chr4.3:84480511-84480530 | MS.gene24924:CDS | 40.0% |
| ! | AGGAATCGGTTGTGATTTTG+GGG | - | chr4.3:84479085-84479104 | MS.gene24924:CDS | 40.0% |
| ! | ATTTTCACATGAGCCAGGTT+AGG | - | chr4.3:84479309-84479328 | MS.gene24924:intron | 40.0% |
| ! | CATGTCATTGTATTGGTAGG+TGG | + | chr4.3:84479580-84479599 | None:intergenic | 40.0% |
| ! | GGTTTTTGTTCTTTGTACCG+TGG | - | chr4.3:84478635-84478654 | MS.gene24924:CDS | 40.0% |
| ! | GTTGATAAGATCCTTCGATC+CGG | - | chr4.3:84478789-84478808 | MS.gene24924:CDS | 40.0% |
| !! | CGAATTTTGATCAACTCCAC+TGG | + | chr4.3:84480136-84480155 | None:intergenic | 40.0% |
| !! | TACAAGAGTGTTGCATTAGG+CGG | - | chr4.3:84480073-84480092 | MS.gene24924:intron | 40.0% |
| !! | TCCTACAAGAGTGTTGCATT+AGG | - | chr4.3:84480070-84480089 | MS.gene24924:intron | 40.0% |
| !!! | TGACCACTTTTTCTACAACC+TGG | + | chr4.3:84480346-84480365 | None:intergenic | 40.0% |
| AAGAAGGATACCCTGTGTTG+TGG | - | chr4.3:84480527-84480546 | MS.gene24924:CDS | 45.0% | |
| AGTGTTGCATTAGGCGGAAT+GGG | - | chr4.3:84480079-84480098 | MS.gene24924:intron | 45.0% | |
| ATGAGGGATGTACCTTCTCA+TGG | - | chr4.3:84480277-84480296 | MS.gene24924:intron | 45.0% | |
| CAACAAAGTGGTGGCCAAAA+TGG | - | chr4.3:84478572-84478591 | MS.gene24924:CDS | 45.0% | |
| CTGAATCCCCTACTATGGTA+TGG | - | chr4.3:84479337-84479356 | MS.gene24924:intron | 45.0% | |
| GATGATTTATGCCGGATCGA+AGG | + | chr4.3:84478803-84478822 | None:intergenic | 45.0% | |
| GCCTAATGCAACACTCTTGT+AGG | + | chr4.3:84480074-84480093 | None:intergenic | 45.0% | |
| GGCACTGCTGGTATAATTTC+TGG | - | chr4.3:84478521-84478540 | MS.gene24924:CDS | 45.0% | |
| TCAGGTAGAGAATTTGTGGC+TGG | - | chr4.3:84478488-84478507 | MS.gene24924:CDS | 45.0% | |
| TGGATCTGAATCCCCTACTA+TGG | - | chr4.3:84479332-84479351 | MS.gene24924:intron | 45.0% | |
| TGTTCTTTGTACCGTGGCAT+GGG | - | chr4.3:84478641-84478660 | MS.gene24924:CDS | 45.0% | |
| TTGTTCTTTGTACCGTGGCA+TGG | - | chr4.3:84478640-84478659 | MS.gene24924:CDS | 45.0% | |
| !! | GAATTTGTGGCTGGTGGATT+TGG | - | chr4.3:84478497-84478516 | MS.gene24924:CDS | 45.0% |
| !! | GCCAGAGCATTTGTTGTGAA+TGG | - | chr4.3:84480571-84480590 | MS.gene24924:CDS | 45.0% |
| !! | ACAAATATAAAATTAATAAA+AGG | + | chr4.3:84479176-84479195 | None:intergenic | 5.0% |
| !!! | TAATATTAATTTTTTAGATA+TGG | - | chr4.3:84478917-84478936 | MS.gene24924:CDS | 5.0% |
| CTAAACCACGCCACAACACA+GGG | + | chr4.3:84480540-84480559 | None:intergenic | 50.0% | |
| GCAACACTCTTGTAGGATGG+AGG | + | chr4.3:84480067-84480086 | None:intergenic | 50.0% | |
| GGATTCAGATCCACCTAACC+TGG | + | chr4.3:84479325-84479344 | None:intergenic | 50.0% | |
| GGTAGAGAATTTGTGGCTGG+TGG | - | chr4.3:84478491-84478510 | MS.gene24924:CDS | 50.0% | |
| TGGAGAAAAGAGGGTTTGCG+CGG | - | chr4.3:84480226-84480245 | MS.gene24924:intron | 50.0% | |
| TTCACATGAGCCAGGTTAGG+TGG | - | chr4.3:84479312-84479331 | MS.gene24924:intron | 50.0% | |
| ! | ATGAAGTTTGTGGGTGCCAC+TGG | - | chr4.3:84479688-84479707 | MS.gene24924:intron | 50.0% |
| ! | GAGTGTTGCATTAGGCGGAA+TGG | - | chr4.3:84480078-84480097 | MS.gene24924:intron | 50.0% |
| ! | TGGTGTCTGGAGGATTAGCA+GGG | - | chr4.3:84480386-84480405 | MS.gene24924:intron | 50.0% |
| ! | TTGGTGTCTGGAGGATTAGC+AGG | - | chr4.3:84480385-84480404 | MS.gene24924:intron | 50.0% |
| ! | TTTTCGGTGGCAGAATGCTG+TGG | - | chr4.3:84479982-84480001 | MS.gene24924:intron | 50.0% |
| !! | TGAAGTTTGTGGGTGCCACT+GGG | - | chr4.3:84479689-84479708 | MS.gene24924:intron | 50.0% |
| !! | TTTGTGGCTGGTGGATTTGG+AGG | - | chr4.3:84478500-84478519 | MS.gene24924:CDS | 50.0% |
| ATTAGCAGGGGTGGCGAGTT+GGG | - | chr4.3:84480399-84480418 | MS.gene24924:intron | 55.0% | |
| CCTAAACCACGCCACAACAC+AGG | + | chr4.3:84480541-84480560 | None:intergenic | 55.0% | |
| CCTGTGTTGTGGCGTGGTTT+AGG | - | chr4.3:84480538-84480557 | MS.gene24924:CDS | 55.0% | |
| CGCGGCATATATCGAGGACT+TGG | - | chr4.3:84480244-84480263 | MS.gene24924:intron | 55.0% | |
| CTAATGGTGCACCCATGCCA+CGG | + | chr4.3:84478655-84478674 | None:intergenic | 55.0% | |
| GGTTTGCGCGGCATATATCG+AGG | - | chr4.3:84480238-84480257 | MS.gene24924:intron | 55.0% | |
| GTGGCGTGGTTTAGGAACTG+CGG | - | chr4.3:84480546-84480565 | MS.gene24924:CDS | 55.0% | |
| ! | GGTGTCTGGAGGATTAGCAG+GGG | - | chr4.3:84480387-84480406 | MS.gene24924:intron | 55.0% |
| GATTAGCAGGGGTGGCGAGT+TGG | - | chr4.3:84480398-84480417 | MS.gene24924:intron | 60.0% | |
| GCATTAGGCGGAATGGGCAC+AGG | - | chr4.3:84480085-84480104 | MS.gene24924:intron | 60.0% | |
| GGATACCCTGTGTTGTGGCG+TGG | - | chr4.3:84480532-84480551 | MS.gene24924:CDS | 60.0% | |
| TTAGGCGGAATGGGCACAGG+AGG | - | chr4.3:84480088-84480107 | MS.gene24924:intron | 60.0% | |
| ! | GTCTGGAGGATTAGCAGGGG+TGG | - | chr4.3:84480390-84480409 | MS.gene24924:intron | 60.0% |
| !! | GGTGGATTTGGAGGCACTGC+TGG | - | chr4.3:84478509-84478528 | MS.gene24924:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 84478455 | 84480672 | 84478455 | ID=MS.gene24924 |
| chr4.3 | mRNA | 84478455 | 84480672 | 84478455 | ID=MS.gene24924.t1;Parent=MS.gene24924 |
| chr4.3 | exon | 84480436 | 84480672 | 84480436 | ID=MS.gene24924.t1.exon1;Parent=MS.gene24924.t1 |
| chr4.3 | CDS | 84480436 | 84480672 | 84480436 | ID=cds.MS.gene24924.t1;Parent=MS.gene24924.t1 |
| chr4.3 | exon | 84478455 | 84479132 | 84478455 | ID=MS.gene24924.t1.exon2;Parent=MS.gene24924.t1 |
| chr4.3 | CDS | 84478455 | 84479132 | 84478455 | ID=cds.MS.gene24924.t1;Parent=MS.gene24924.t1 |
| Gene Sequence |
| Protein sequence |
