AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene010744

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene010744.t1 MTR_0092s0100 95.658 737 20 3 1 733 4 732 0.0 1438
MS.gene010744.t1 MTR_0092s0100 95.658 737 20 3 1 733 1 729 0.0 1438
MS.gene010744.t1 MTR_4g026485 53.346 538 194 11 208 733 133 625 6.72e-176 518
MS.gene010744.t1 MTR_0092s0060 97.297 185 4 1 1 184 1 185 3.67e-124 368
MS.gene010744.t1 MTR_8g077940 35.946 370 220 11 374 733 180 542 4.42e-59 209
MS.gene010744.t1 MTR_7g027190 26.484 438 270 11 321 733 264 674 1.48e-35 144
MS.gene010744.t1 MTR_3g065980 27.895 380 246 7 373 732 169 540 1.82e-35 142
MS.gene010744.t1 MTR_3g056110 27.056 377 248 9 375 732 174 542 3.40e-32 132
MS.gene010744.t1 MTR_4g076020 28.533 368 224 13 379 732 87 429 3.93e-30 124
MS.gene010744.t1 MTR_4g077760 28.818 406 265 12 342 732 159 555 5.90e-29 122
MS.gene010744.t1 MTR_5g058860 29.442 394 234 16 373 733 116 498 1.19e-28 121
MS.gene010744.t1 MTR_5g094450 25.469 373 259 7 377 732 162 532 1.47e-28 121
MS.gene010744.t1 MTR_3g089055 26.954 371 252 8 377 732 199 565 1.53e-27 118
MS.gene010744.t1 MTR_3g089055 26.954 371 252 8 377 732 204 570 1.84e-27 118
MS.gene010744.t1 MTR_3g072710 26.933 401 237 16 373 733 117 501 1.46e-26 114
MS.gene010744.t1 MTR_2g082090 26.031 388 263 9 362 731 197 578 1.76e-26 115
MS.gene010744.t1 MTR_7g074650 27.322 366 240 9 379 732 441 792 2.22e-26 115
MS.gene010744.t1 MTR_5g097480 23.099 355 256 7 392 732 193 544 2.90e-25 111
MS.gene010744.t1 MTR_1g029420 26.596 376 247 12 377 732 226 592 4.31e-25 110
MS.gene010744.t1 MTR_8g093070 26.273 373 254 9 370 731 133 495 1.23e-24 108
MS.gene010744.t1 MTR_2g026250 24.543 383 253 11 375 733 227 597 5.95e-24 107
MS.gene010744.t1 MTR_4g102790 23.545 378 265 7 373 731 289 661 2.35e-23 105
MS.gene010744.t1 MTR_1g069725 28.533 375 238 16 373 733 106 464 3.43e-23 103
MS.gene010744.t1 MTR_4g104020 25.258 388 251 12 373 733 146 521 5.82e-23 103
MS.gene010744.t1 MTR_4g133660 23.622 381 255 9 377 733 176 544 1.08e-22 103
MS.gene010744.t1 MTR_5g019750 30.736 231 147 6 510 733 71 295 2.25e-22 98.6
MS.gene010744.t1 MTR_8g442410 22.798 386 260 10 373 732 152 525 5.36e-19 91.7
MS.gene010744.t1 MTR_4g097080 22.251 391 273 12 363 732 123 503 9.85e-19 90.5
MS.gene010744.t1 MTR_2g097473 23.181 371 262 9 377 731 290 653 1.34e-18 90.9
MS.gene010744.t1 MTR_2g034280 23.711 388 271 10 362 732 196 575 2.66e-18 89.7
MS.gene010744.t1 MTR_2g034260 24.870 386 258 12 372 732 206 584 3.09e-18 89.4
MS.gene010744.t1 MTR_2g034250 24.147 381 268 9 372 732 206 585 7.56e-18 88.2
MS.gene010744.t1 MTR_4g064200 23.848 369 263 7 377 731 285 649 1.88e-17 87.0
MS.gene010744.t1 MTR_7g109580 25.337 371 256 11 377 732 190 554 2.83e-17 86.3
MS.gene010744.t1 MTR_1g096030 25.686 401 237 16 373 731 77 458 2.92e-17 85.5
MS.gene010744.t1 MTR_7g062120 22.222 378 262 6 377 732 373 740 4.27e-17 86.3
MS.gene010744.t1 MTR_2g097390 24.129 373 257 11 377 731 276 640 1.22e-16 84.3
MS.gene010744.t1 MTR_2g097410 22.572 381 257 9 377 731 372 740 1.23e-16 84.7
MS.gene010744.t1 MTR_2g097463 21.563 371 268 7 377 731 291 654 2.25e-16 83.6
MS.gene010744.t1 MTR_4g064160 21.792 413 283 10 347 731 283 683 2.48e-16 83.6
MS.gene010744.t1 MTR_2g097310 22.798 386 246 10 377 731 273 637 2.86e-16 83.2
MS.gene010744.t1 MTR_2g099110 23.274 391 251 10 377 732 75 451 4.31e-16 82.0
MS.gene010744.t1 MTR_2g097467 21.739 414 290 11 345 731 247 653 8.18e-16 82.0
MS.gene010744.t1 MTR_2g097380 22.715 361 234 9 384 731 232 560 4.46e-15 79.3
MS.gene010744.t1 MTR_4g064180 22.432 370 265 9 377 727 255 621 8.77e-15 78.6
MS.gene010744.t1 MTR_2g089100 23.039 408 243 15 377 731 53 442 1.85e-14 77.0
MS.gene010744.t1 MTR_4g064120 21.409 369 270 7 377 727 255 621 5.55e-14 75.9
MS.gene010744.t1 MTR_4g076140 32.941 170 106 2 353 514 19 188 5.74e-14 75.5
MS.gene010744.t1 MTR_2g097350 24.011 379 250 14 377 731 275 639 9.94e-14 75.1
MS.gene010744.t1 MTR_4g064150 21.505 372 274 6 377 731 362 732 1.28e-13 75.1
MS.gene010744.t1 MTR_5g015490 21.465 396 251 11 377 732 115 490 9.87e-13 71.6
MS.gene010744.t1 MTR_5g009080 27.179 195 136 2 353 545 33 223 1.19e-12 71.2
MS.gene010744.t1 MTR_3g022830 31.724 145 89 2 377 515 26 166 3.49e-12 69.7
MS.gene010744.t1 MTR_1g086970 23.457 405 269 16 357 732 86 478 4.54e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene010744.t1 AT4G00150 56.959 388 139 10 349 733 193 555 7.67e-139 420
MS.gene010744.t1 AT2G45160 48.069 466 201 16 291 733 193 640 1.21e-121 378
MS.gene010744.t1 AT3G60630 44.950 505 202 17 270 733 154 623 1.43e-111 351
MS.gene010744.t1 AT4G36710 32.888 374 225 12 374 732 123 485 5.37e-55 196
MS.gene010744.t1 AT2G01570 29.301 372 240 9 373 732 221 581 1.42e-33 137
MS.gene010744.t1 AT5G66770 27.990 393 260 12 355 732 200 584 2.17e-31 130
MS.gene010744.t1 AT3G03450 27.321 377 246 10 373 732 180 545 2.86e-31 129
MS.gene010744.t1 AT5G17490 28.989 376 235 13 373 732 157 516 1.11e-30 127
MS.gene010744.t1 AT2G04890 26.005 373 246 8 377 732 54 413 6.50e-30 123
MS.gene010744.t1 AT3G54220 28.333 360 245 8 379 731 296 649 7.17e-30 126
MS.gene010744.t1 AT5G48150 24.731 372 260 8 377 732 123 490 4.78e-29 122
MS.gene010744.t1 AT5G48150 24.731 372 260 8 377 732 123 490 4.78e-29 122
MS.gene010744.t1 AT5G48150 24.731 372 260 8 377 732 123 490 4.78e-29 122
MS.gene010744.t1 AT5G48150 24.731 372 260 8 377 732 123 490 4.78e-29 122
MS.gene010744.t1 AT5G41920 25.122 410 266 10 339 732 16 400 1.02e-28 119
MS.gene010744.t1 AT1G14920 26.260 377 245 9 373 732 169 529 1.16e-28 121
MS.gene010744.t1 AT3G50650 28.800 375 222 12 386 732 185 542 7.47e-28 119
MS.gene010744.t1 AT1G66350 25.606 371 251 10 373 733 152 507 1.89e-27 117
MS.gene010744.t1 AT1G50600 24.194 372 261 7 377 732 160 526 3.40e-27 117
MS.gene010744.t1 AT1G50600 24.194 372 261 7 377 732 235 601 1.05e-26 116
MS.gene010744.t1 AT1G50600 24.194 372 261 7 377 732 231 597 1.07e-26 115
MS.gene010744.t1 AT4G08250 29.024 379 243 14 373 731 104 476 2.12e-26 114
MS.gene010744.t1 AT4G17230 25.789 380 245 8 377 732 159 525 3.19e-26 114
MS.gene010744.t1 AT4G17230 25.789 380 245 8 377 732 159 525 3.19e-26 114
MS.gene010744.t1 AT1G21450 24.574 411 272 11 350 732 193 593 4.49e-26 114
MS.gene010744.t1 AT5G59450 23.333 420 281 10 343 732 190 598 7.09e-23 104
MS.gene010744.t1 AT1G55580 24.771 327 220 6 422 732 129 445 1.20e-19 92.8
MS.gene010744.t1 AT1G63100 24.051 395 249 12 373 731 274 653 2.07e-19 93.6
MS.gene010744.t1 AT1G63100 24.495 396 246 14 373 731 249 628 2.14e-19 93.2
MS.gene010744.t1 AT1G07520 21.067 375 269 8 380 731 322 692 4.81e-18 89.4
MS.gene010744.t1 AT1G07520 21.067 375 269 8 380 731 323 693 5.21e-18 89.0
MS.gene010744.t1 AT1G07520 21.067 375 269 8 380 731 158 528 6.11e-18 88.2
MS.gene010744.t1 AT1G07520 21.067 375 269 8 380 731 158 528 6.11e-18 88.2
MS.gene010744.t1 AT3G46600 21.594 389 281 7 365 732 194 579 1.25e-16 84.3
MS.gene010744.t1 AT3G46600 21.594 389 281 7 365 732 162 547 3.33e-16 82.8
MS.gene010744.t1 AT3G46600 21.622 370 273 6 377 732 5 371 6.53e-16 80.9
MS.gene010744.t1 AT1G07530 22.546 377 261 9 377 731 397 764 1.22e-15 81.6
MS.gene010744.t1 AT1G50420 29.897 194 116 5 373 555 54 238 3.42e-15 79.3
MS.gene010744.t1 AT4G37650 22.081 394 258 10 377 732 147 529 1.62e-14 77.4
MS.gene010744.t1 AT5G52510 24.522 314 191 11 454 732 338 640 2.44e-13 73.9
MS.gene010744.t1 AT2G29065 21.220 377 273 7 377 731 253 627 2.18e-12 70.9

Find 154 sgRNAs with CRISPR-Local

Find 192 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTGTGAAGAACTGAAATT+AGG 0.187840 7.4:+59384630 None:intergenic
GGAAAAGGTGTGTTAGATTT+TGG 0.194202 7.4:-59385266 MS.gene010744:CDS
GGCAGTTGAGAAGCTTGTTT+TGG 0.246331 7.4:-59383341 MS.gene010744:CDS
AAGTTACCATTTGAAGAAAT+AGG 0.249425 7.4:+59384765 None:intergenic
ATTTGTTCTGATTTCCCTTT+TGG 0.265105 7.4:-59384681 MS.gene010744:CDS
TCTTCGCCGCCACCGCTTCC+AGG 0.267033 7.4:+59384237 None:intergenic
TTCCATTATCAATTTCAATA+TGG 0.276508 7.4:+59384914 None:intergenic
AATTCCGAAGATACCCTTCT+TGG 0.278051 7.4:-59384388 MS.gene010744:CDS
TTCCATATTGAAATTGATAA+TGG 0.285700 7.4:-59384916 MS.gene010744:CDS
GCTTCCCCATAGGAGAAATT+TGG 0.291304 7.4:+59384100 None:intergenic
AAATGCCTCCTTAAAATAAA+AGG 0.302232 7.4:+59384062 None:intergenic
GTAGGAGTGGTTTGTTGATT+TGG 0.323080 7.4:+59385110 None:intergenic
AGATATTGAAGATGCATCTA+TGG 0.323147 7.4:-59384892 MS.gene010744:CDS
GTATAAACTGAGCTTGGTTT+TGG 0.329115 7.4:+59384517 None:intergenic
GGAACACGCGCACGGGATAT+TGG 0.339508 7.4:-59384136 MS.gene010744:CDS
AATGGCGCCTAAGCAGAAAA+TGG 0.339684 7.4:-59384265 MS.gene010744:CDS
GAAGATACCCTTCTTGGATT+CGG 0.340738 7.4:-59384382 MS.gene010744:CDS
GTTTATACCTAACCCTAGTT+TGG 0.345137 7.4:-59384502 MS.gene010744:CDS
CAACAAGATGTTGAATTCAA+TGG 0.350188 7.4:-59384825 MS.gene010744:CDS
CTTGTGAAGAACTGAAATTA+GGG 0.351845 7.4:+59384631 None:intergenic
CAGCATCAACAACAATCAAT+TGG 0.353717 7.4:-59384579 MS.gene010744:CDS
AAGATACCCTTCTTGGATTC+GGG 0.361865 7.4:-59384381 MS.gene010744:CDS
TGTTTGGTGCAGAGGATTCC+TGG 0.364499 7.4:-59383214 MS.gene010744:CDS
TTTGCACTCCAGTCTTATTC+CGG 0.364854 7.4:-59383445 MS.gene010744:CDS
AGTTACCATTTGAAGAAATA+GGG 0.368741 7.4:+59384766 None:intergenic
CGGGTCAAGAGATGTTTCTT+AGG 0.388186 7.4:-59384362 MS.gene010744:CDS
ATCGGTAGAAGCGCCGCCTC+CGG 0.394887 7.4:+59385052 None:intergenic
CAATCACCAAATTTCTCCTA+TGG 0.395643 7.4:-59384106 MS.gene010744:CDS
TATGTATTCTTCAAAGGGTA+AGG 0.404339 7.4:+59385289 None:intergenic
ACTTATAGACGCCGGTAATC+CGG 0.404547 7.4:-59384157 MS.gene010744:CDS
CTTGACCCTATTTCTTCAAA+TGG 0.407880 7.4:-59384771 MS.gene010744:CDS
TTCTATCCTGCGAGCGCAAA+CGG 0.414907 7.4:+59383317 None:intergenic
GTGCGCGTGTTCCGGATTAC+CGG 0.417521 7.4:+59384146 None:intergenic
GGGAACCCTGGAAGCGGTGG+CGG 0.418143 7.4:-59384243 MS.gene010744:CDS
AGTCTCTGAATTCTGTTTCG+TGG 0.422058 7.4:-59383648 MS.gene010744:CDS
AATATCCCGTGCGCGTGTTC+CGG 0.422409 7.4:+59384138 None:intergenic
AAGATGTGGAATGGAGGATT+GGG 0.422443 7.4:-59384979 MS.gene010744:CDS
CGCAGCGCCGGTGGTGCTAT+CGG 0.426723 7.4:+59385034 None:intergenic
ATGGCGCCTAAGCAGAAAAT+GGG 0.428884 7.4:-59384264 MS.gene010744:CDS
AGAGTCGCAGGCAGAGTGTT+TGG 0.429838 7.4:-59383230 MS.gene010744:CDS
AAATTTGAAAACTGCAGAAC+AGG 0.433172 7.4:+59383934 None:intergenic
CCACAGCTTCAAGCAATGCT+TGG 0.439953 7.4:+59383902 None:intergenic
TCGATCATCTGAAGGACATC+CGG 0.441979 7.4:+59383382 None:intergenic
TAATTTGAGAAAGAGCAAAT+AGG 0.442683 7.4:+59383583 None:intergenic
ACTAGCCTCTTGCTCAAGAT+TGG 0.445518 7.4:-59383985 MS.gene010744:CDS
ATCTCATCTCGGTTTCAACT+TGG 0.447156 7.4:-59383132 MS.gene010744:CDS
TTTCCTATGTATTCTTCAAA+GGG 0.453051 7.4:+59385284 None:intergenic
AAAGATGTGGAATGGAGGAT+TGG 0.456441 7.4:-59384980 MS.gene010744:CDS
AGCAGCAGTAGCAGTGGTAG+TGG 0.460125 7.4:+59384707 None:intergenic
TTCATCCCTCTACTACCAAA+AGG 0.463150 7.4:+59384666 None:intergenic
TCACAAGTTTCACTTTCTCA+TGG 0.465348 7.4:-59384615 MS.gene010744:CDS
GGTGCAGAGGATTCCTGGTA+GGG 0.470286 7.4:-59383209 MS.gene010744:CDS
ATCAAGTGATTCAAGCAAAC+CGG 0.470386 7.4:+59383426 None:intergenic
TCGCAATCGCGTAGTGGCTG+CGG 0.474481 7.4:+59383625 None:intergenic
TAAAAGGCAGCCCTTTGAAA+AGG 0.479249 7.4:+59384078 None:intergenic
GCCTAAAATTGTCGTAACAT+TGG 0.480828 7.4:-59383515 MS.gene010744:CDS
AGGGAAAATTGTTGCTATGC+GGG 0.481377 7.4:-59385173 MS.gene010744:CDS
CTCGATTTCGTCGTGGTGTG+AGG 0.481816 7.4:+59383750 None:intergenic
CGCAGGATAGAACACTTCCC+TGG 0.482072 7.4:-59383306 MS.gene010744:CDS
AGCTTCAAGCAATGCTTGGT+TGG 0.488113 7.4:+59383906 None:intergenic
TTTGAAGAATACATAGGAAA+AGG 0.490303 7.4:-59385281 MS.gene010744:CDS
GGTTAGGTATAAACTGAGCT+TGG 0.491230 7.4:+59384511 None:intergenic
AGCATCAACAACAATCAATT+GGG 0.491428 7.4:-59384578 MS.gene010744:CDS
TTTGGGCCGTTTGCGCTCGC+AGG 0.491743 7.4:-59383323 MS.gene010744:CDS
TGGTGCAGAGGATTCCTGGT+AGG 0.496504 7.4:-59383210 MS.gene010744:CDS
ACGCGATTGCGAAGCAGTTG+TGG 0.497464 7.4:-59383614 MS.gene010744:CDS
TCACACGGTAGCGCCGGAGG+CGG 0.497760 7.4:-59385065 MS.gene010744:CDS
AGCACTAAAGGCAGGTATGA+AGG 0.498213 7.4:+59383559 None:intergenic
ATCTTGAGCAAGAGGCTAGT+TGG 0.505941 7.4:+59383988 None:intergenic
CCATTGTCCTCTGCTGCAGA+TGG 0.506974 7.4:+59384283 None:intergenic
CGAGAAATACTATCTTCAAC+CGG 0.509431 7.4:-59383362 MS.gene010744:CDS
AATCACCAAATTTCTCCTAT+GGG 0.509811 7.4:-59384105 MS.gene010744:CDS
GAATCCAAGAAGGGTATCTT+CGG 0.510787 7.4:+59384384 None:intergenic
CGGTGGCGGCGAAGATGTAT+CGG 0.512246 7.4:-59384229 MS.gene010744:CDS
CGATCATCTGAAGGACATCC+GGG 0.514286 7.4:+59383383 None:intergenic
ACAATGGTCTTCATTTATGC+AGG 0.517675 7.4:-59383830 MS.gene010744:CDS
GTGCAGAGGATTCCTGGTAG+GGG 0.518621 7.4:-59383208 MS.gene010744:CDS
AAAATCATATGCTGAGGAAA+CGG 0.519993 7.4:+59383466 None:intergenic
TTACCCTTTGAAGAATACAT+AGG 0.522370 7.4:-59385287 MS.gene010744:CDS
AAAACAAGCTTCTCAACTGC+CGG 0.524789 7.4:+59383343 None:intergenic
CCAAGCATTGCTTGAAGCTG+TGG 0.524919 7.4:-59383902 MS.gene010744:CDS
CTTCGCCGCCACCGCTTCCA+GGG 0.526440 7.4:+59384238 None:intergenic
AGAACTCACTTGTCTTGTGT+TGG 0.527376 7.4:-59383165 MS.gene010744:CDS
CACTTGTCTTGTGTTGGCAA+AGG 0.532124 7.4:-59383159 MS.gene010744:CDS
TCATCCCTCTACTACCAAAA+GGG 0.532544 7.4:+59384667 None:intergenic
ATGGGGAACCCTGGAAGCGG+TGG 0.534973 7.4:-59384246 MS.gene010744:CDS
TGTCTTGTGTTGGCAAAGGA+AGG 0.536796 7.4:-59383155 MS.gene010744:CDS
TAGTAACTTCACAGAGTCGC+AGG 0.538196 7.4:-59383242 MS.gene010744:CDS
GACAGTGTTGAGGATGAAGT+AGG 0.538311 7.4:+59385092 None:intergenic
CTCTTGACCCGAATCCAAGA+AGG 0.539089 7.4:+59384374 None:intergenic
CAAGCAAACCGGAATAAGAC+TGG 0.539954 7.4:+59383437 None:intergenic
TCCACATGGAATCCCCTACC+AGG 0.543648 7.4:+59383196 None:intergenic
GATATTGAAGATGCATCTAT+GGG 0.546979 7.4:-59384891 MS.gene010744:CDS
TTTGTTGGCCGCAGCGCCGG+TGG 0.548083 7.4:+59385025 None:intergenic
AAGCACCAATCTTGAGCAAG+AGG 0.549041 7.4:+59383980 None:intergenic
CTTTGAAAAGGCTTCCCCAT+AGG 0.549307 7.4:+59384090 None:intergenic
CAAGTTTCACTTTCTCATGG+TGG 0.549648 7.4:-59384612 MS.gene010744:CDS
GCCTCCGGCGCTACCGTGTG+AGG 0.550488 7.4:+59385067 None:intergenic
TGAAGGTAAAAGATGTGGAA+TGG 0.553057 7.4:-59384988 MS.gene010744:CDS
TTCCTCACCATCTGCAGCAG+AGG 0.556566 7.4:-59384290 MS.gene010744:CDS
ATCGGCTCATCAGTTTCAGC+AGG 0.556576 7.4:-59384211 MS.gene010744:CDS
TTCACGAATCGAAGCACTAA+AGG 0.557184 7.4:+59383547 None:intergenic
TGTTGAGGATGAAGTAGGAG+TGG 0.560505 7.4:+59385097 None:intergenic
TCGATTTCGTCGTGGTGTGA+GGG 0.560923 7.4:+59383751 None:intergenic
GTCAAGAGATGTTTCTTAGG+AGG 0.562943 7.4:-59384359 MS.gene010744:CDS
AGGCAGAGTGTTTGGTGCAG+AGG 0.564913 7.4:-59383222 MS.gene010744:CDS
GAATGATCTTGATCTTGACT+TGG 0.565052 7.4:+59384936 None:intergenic
GCACTAAAGGCAGGTATGAA+GGG 0.565237 7.4:+59383560 None:intergenic
AAGCAGAAAATGGGGAACCC+TGG 0.568423 7.4:-59384255 MS.gene010744:CDS
TCCTCACACGGTAGCGCCGG+AGG 0.569283 7.4:-59385068 MS.gene010744:CDS
TCTTCCTCACACGGTAGCGC+CGG 0.570460 7.4:-59385071 MS.gene010744:CDS
GAGAATCTGAAGCAATATGC+TGG 0.570600 7.4:-59383712 MS.gene010744:CDS
AATCTCAGCAGCAGTAGCAG+TGG 0.572943 7.4:+59384701 None:intergenic
GGTAATCCGGAACACGCGCA+CGG 0.575492 7.4:-59384144 MS.gene010744:CDS
GTCCTCTGCTGCAGATGGTG+AGG 0.576808 7.4:+59384288 None:intergenic
GAGGCTGAAGCTGAATCTCT+CGG 0.577024 7.4:+59384445 None:intergenic
CAAATTGAAGGTAAAAGATG+TGG 0.580900 7.4:-59384993 MS.gene010744:CDS
AAAACCTACTCTTGTCATCA+GGG 0.582681 7.4:-59383282 MS.gene010744:CDS
GCATTGCTTGAAGCTGTGGA+AGG 0.584725 7.4:-59383898 MS.gene010744:CDS
CGAATCGAAGCACTAAAGGC+AGG 0.590451 7.4:+59383551 None:intergenic
GTAATCCGGAACACGCGCAC+GGG 0.591224 7.4:-59384143 MS.gene010744:CDS
GCAAAGGAAGGATCTCATCT+CGG 0.596929 7.4:-59383143 MS.gene010744:CDS
AGTATTTCTCGATCATCTGA+AGG 0.598913 7.4:+59383374 None:intergenic
GCTTCTACCGATAGCACCAC+CGG 0.599672 7.4:-59385041 MS.gene010744:CDS
GGATAGGAGTTGTGATCGAA+CGG 0.600755 7.4:-59383494 MS.gene010744:CDS
ATGTATTCTTCAAAGGGTAA+GGG 0.603369 7.4:+59385290 None:intergenic
CCATCTGCAGCAGAGGACAA+TGG 0.604634 7.4:-59384283 MS.gene010744:CDS
TTATGCAGGAGTTAGCACTA+AGG 0.606201 7.4:-59383816 MS.gene010744:CDS
AGTTCTGCTTCTTCTCCACA+TGG 0.609894 7.4:+59383182 None:intergenic
AAAATGGGGAACCCTGGAAG+CGG 0.610138 7.4:-59384249 MS.gene010744:CDS
TGCAGCTGAGAGTGTGTGAA+AGG 0.610994 7.4:+59384474 None:intergenic
AAATTGTCGTAACATTGGAT+AGG 0.615531 7.4:-59383510 MS.gene010744:CDS
ACGCGCACGGGATATTGGCG+CGG 0.617795 7.4:-59384131 MS.gene010744:CDS
CGATAGCACCACCGGCGCTG+CGG 0.619257 7.4:-59385033 MS.gene010744:CDS
AGGTAAAAGATGTGGAATGG+AGG 0.623374 7.4:-59384985 MS.gene010744:CDS
AGAACCCTGATGACAAGAGT+AGG 0.623547 7.4:+59383278 None:intergenic
CAGGAGTTAGCACTAAGGAA+TGG 0.623926 7.4:-59383811 MS.gene010744:CDS
GTGAAGTTACTAAATGTCAA+CGG 0.630606 7.4:+59383253 None:intergenic
TCTTGACCCGAATCCAAGAA+GGG 0.632079 7.4:+59384375 None:intergenic
ATCACCAAATTTCTCCTATG+GGG 0.632427 7.4:-59384104 MS.gene010744:CDS
TCAACACTGTCTTCCTCACA+CGG 0.633334 7.4:-59385080 MS.gene010744:CDS
TGGTTCATAACAAACTGATG+AGG 0.638887 7.4:+59384537 None:intergenic
TCCTGGTAGGGGATTCCATG+TGG 0.639151 7.4:-59383197 MS.gene010744:CDS
ACTGCTTCGCAATCGCGTAG+TGG 0.643756 7.4:+59383619 None:intergenic
AATGCAGTGATCTTGAGTGC+AGG 0.644744 7.4:+59383781 None:intergenic
GAGGGAAAATTGTTGCTATG+CGG 0.647727 7.4:-59385174 MS.gene010744:CDS
GAGTTAGCACTAAGGAATGG+TGG 0.649571 7.4:-59383808 MS.gene010744:CDS
CCAGCTAAAAGACTCAATTG+TGG 0.675226 7.4:-59384423 MS.gene010744:CDS
TGTTAGTGTTAATGTCCACC+CGG 0.680851 7.4:-59383401 MS.gene010744:CDS
TGGCGCCTAAGCAGAAAATG+GGG 0.686084 7.4:-59384263 MS.gene010744:CDS
GCTGCAGAACTTATAGACGC+CGG 0.689078 7.4:-59384165 MS.gene010744:CDS
AACTAAGCTCGATTTCGTCG+TGG 0.700452 7.4:+59383743 None:intergenic
TCATCTGAAGGACATCCGGG+TGG 0.719806 7.4:+59383386 None:intergenic
GTGTGAGGAAGACAGTGTTG+AGG 0.783398 7.4:+59385082 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CATATAATAGATTTTGATAT+TGG - chr7.4:59384563-59384582 MS.gene010744:CDS 15.0%
!! TTCCATATTGAAATTGATAA+TGG - chr7.4:59383509-59383528 MS.gene010744:CDS 20.0%
!! TTCCATTATCAATTTCAATA+TGG + chr7.4:59383514-59383533 None:intergenic 20.0%
!!! ATAGATTTTGATATTGGTTT+TGG - chr7.4:59384569-59384588 MS.gene010744:CDS 20.0%
!!! ATTCAATGGTTTTAGTTTTA+TGG - chr7.4:59383614-59383633 MS.gene010744:CDS 20.0%
! AAAAACATACCACAAATTGA+AGG - chr7.4:59383420-59383439 MS.gene010744:CDS 25.0%
! AAATGCCTCCTTAAAATAAA+AGG + chr7.4:59384366-59384385 None:intergenic 25.0%
! AAGTTACCATTTGAAGAAAT+AGG + chr7.4:59383663-59383682 None:intergenic 25.0%
! AGTTACCATTTGAAGAAATA+GGG + chr7.4:59383662-59383681 None:intergenic 25.0%
! TAATTTGAGAAAGAGCAAAT+AGG + chr7.4:59384845-59384864 None:intergenic 25.0%
! TCAAAAACAACAACAGAATT+GGG + chr7.4:59383285-59383304 None:intergenic 25.0%
! TTTCCTATGTATTCTTCAAA+GGG + chr7.4:59383144-59383163 None:intergenic 25.0%
! TTTGAAGAATACATAGGAAA+AGG - chr7.4:59383144-59383163 MS.gene010744:CDS 25.0%
!! TATAATTGATCAGCTTTTCA+AGG - chr7.4:59384238-59384257 MS.gene010744:CDS 25.0%
!! TTTTCCTATGTATTCTTCAA+AGG + chr7.4:59383145-59383164 None:intergenic 25.0%
!!! AATTTGTGGTATGTTTTTGT+TGG + chr7.4:59383418-59383437 None:intergenic 25.0%
!!! TTTGTTGATTTGGTTTTTTG+AGG + chr7.4:59383308-59383327 None:intergenic 25.0%
AAAATCATATGCTGAGGAAA+CGG + chr7.4:59384962-59384981 None:intergenic 30.0%
AAATTGTCGTAACATTGGAT+AGG - chr7.4:59384915-59384934 MS.gene010744:CDS 30.0%
AAATTTGAAAACTGCAGAAC+AGG + chr7.4:59384494-59384513 None:intergenic 30.0%
AATCACCAAATTTCTCCTAT+GGG - chr7.4:59384320-59384339 MS.gene010744:CDS 30.0%
ACTTGTGAAGAACTGAAATT+AGG + chr7.4:59383798-59383817 None:intergenic 30.0%
AGATATTGAAGATGCATCTA+TGG - chr7.4:59383533-59383552 MS.gene010744:CDS 30.0%
AGCATCAACAACAATCAATT+GGG - chr7.4:59383847-59383866 MS.gene010744:CDS 30.0%
ATGTATTCTTCAAAGGGTAA+GGG + chr7.4:59383138-59383157 None:intergenic 30.0%
CAAATTGAAGGTAAAAGATG+TGG - chr7.4:59383432-59383451 MS.gene010744:CDS 30.0%
CAACAAGATGTTGAATTCAA+TGG - chr7.4:59383600-59383619 MS.gene010744:CDS 30.0%
CTTGTGAAGAACTGAAATTA+GGG + chr7.4:59383797-59383816 None:intergenic 30.0%
GATATTGAAGATGCATCTAT+GGG - chr7.4:59383534-59383553 MS.gene010744:CDS 30.0%
GTCAAAAACAACAACAGAAT+TGG + chr7.4:59383286-59383305 None:intergenic 30.0%
GTGAAGTTACTAAATGTCAA+CGG + chr7.4:59385175-59385194 None:intergenic 30.0%
TATGTATTCTTCAAAGGGTA+AGG + chr7.4:59383139-59383158 None:intergenic 30.0%
TGAAAGGAAAAACCAAACTA+GGG + chr7.4:59383938-59383957 None:intergenic 30.0%
! ATTTGTTCTGATTTCCCTTT+TGG - chr7.4:59383744-59383763 MS.gene010744:CDS 30.0%
! CATCTTTTACCTTCAATTTG+TGG + chr7.4:59383432-59383451 None:intergenic 30.0%
! TCCAATGTTACGACAATTTT+AGG + chr7.4:59384914-59384933 None:intergenic 30.0%
! TTAAGCAAGCTTTTACAAGT+TGG - chr7.4:59383558-59383577 MS.gene010744:CDS 30.0%
! TTACCCTTTGAAGAATACAT+AGG - chr7.4:59383138-59383157 MS.gene010744:CDS 30.0%
!!! GATTTTGATATTGGTTTTGG+TGG - chr7.4:59384572-59384591 MS.gene010744:CDS 30.0%
AAAAACCTACTCTTGTCATC+AGG - chr7.4:59385142-59385161 MS.gene010744:CDS 35.0%
AAAACCTACTCTTGTCATCA+GGG - chr7.4:59385143-59385162 MS.gene010744:CDS 35.0%
ACAATGGTCTTCATTTATGC+AGG - chr7.4:59384595-59384614 MS.gene010744:CDS 35.0%
AGTATTTCTCGATCATCTGA+AGG + chr7.4:59385054-59385073 None:intergenic 35.0%
AGTGCAAAAATCATATGCTG+AGG + chr7.4:59384968-59384987 None:intergenic 35.0%
ATCAAGTGATTCAAGCAAAC+CGG + chr7.4:59385002-59385021 None:intergenic 35.0%
ATCACCAAATTTCTCCTATG+GGG - chr7.4:59384321-59384340 MS.gene010744:CDS 35.0%
CAATCACCAAATTTCTCCTA+TGG - chr7.4:59384319-59384338 MS.gene010744:CDS 35.0%
CAGCATCAACAACAATCAAT+TGG - chr7.4:59383846-59383865 MS.gene010744:CDS 35.0%
CGAGAAATACTATCTTCAAC+CGG - chr7.4:59385063-59385082 MS.gene010744:CDS 35.0%
GAATGATCTTGATCTTGACT+TGG + chr7.4:59383492-59383511 None:intergenic 35.0%
GCCTAAAATTGTCGTAACAT+TGG - chr7.4:59384910-59384929 MS.gene010744:CDS 35.0%
GTGAAAGGAAAAACCAAACT+AGG + chr7.4:59383939-59383958 None:intergenic 35.0%
GTTTATACCTAACCCTAGTT+TGG - chr7.4:59383923-59383942 MS.gene010744:CDS 35.0%
TCACAAGTTTCACTTTCTCA+TGG - chr7.4:59383810-59383829 MS.gene010744:CDS 35.0%
TGAAGGTAAAAGATGTGGAA+TGG - chr7.4:59383437-59383456 MS.gene010744:CDS 35.0%
TGGTTCATAACAAACTGATG+AGG + chr7.4:59383891-59383910 None:intergenic 35.0%
! CTTGACCCTATTTCTTCAAA+TGG - chr7.4:59383654-59383673 MS.gene010744:CDS 35.0%
! GTATAAACTGAGCTTGGTTT+TGG + chr7.4:59383911-59383930 None:intergenic 35.0%
! TGTTTTCTCAACAGCAAGAA+CGG - chr7.4:59383214-59383233 MS.gene010744:CDS 35.0%
!! ATTTCCCTTTTGGTAGTAGA+GGG - chr7.4:59383754-59383773 MS.gene010744:CDS 35.0%
!! GGAAAAGGTGTGTTAGATTT+TGG - chr7.4:59383159-59383178 MS.gene010744:CDS 35.0%
!!! AAGGGCTGCCTTTTATTTTA+AGG - chr7.4:59384355-59384374 MS.gene010744:CDS 35.0%
!!! ATATTGGTTTTGGTGGACAA+TGG - chr7.4:59384579-59384598 MS.gene010744:CDS 35.0%
AAAACAAGCTTCTCAACTGC+CGG + chr7.4:59385085-59385104 None:intergenic 40.0%
AAAGATGTGGAATGGAGGAT+TGG - chr7.4:59383445-59383464 MS.gene010744:CDS 40.0%
AAGATACCCTTCTTGGATTC+GGG - chr7.4:59384044-59384063 MS.gene010744:CDS 40.0%
AAGATGTGGAATGGAGGATT+GGG - chr7.4:59383446-59383465 MS.gene010744:CDS 40.0%
AATTCCGAAGATACCCTTCT+TGG - chr7.4:59384037-59384056 MS.gene010744:CDS 40.0%
AGAACTCACTTGTCTTGTGT+TGG - chr7.4:59385260-59385279 MS.gene010744:CDS 40.0%
AGGGAAAATTGTTGCTATGC+GGG - chr7.4:59383252-59383271 MS.gene010744:CDS 40.0%
AGGTAAAAGATGTGGAATGG+AGG - chr7.4:59383440-59383459 MS.gene010744:CDS 40.0%
AGTCTCTGAATTCTGTTTCG+TGG - chr7.4:59384777-59384796 MS.gene010744:CDS 40.0%
ATCTCATCTCGGTTTCAACT+TGG - chr7.4:59385293-59385312 MS.gene010744:CDS 40.0%
CAAGTTTCACTTTCTCATGG+TGG - chr7.4:59383813-59383832 MS.gene010744:CDS 40.0%
CCAGCTAAAAGACTCAATTG+TGG - chr7.4:59384002-59384021 MS.gene010744:CDS 40.0%
GAAGATACCCTTCTTGGATT+CGG - chr7.4:59384043-59384062 MS.gene010744:CDS 40.0%
GAGGGAAAATTGTTGCTATG+CGG - chr7.4:59383251-59383270 MS.gene010744:CDS 40.0%
GGAAAAACCAAACTAGGGTT+AGG + chr7.4:59383933-59383952 None:intergenic 40.0%
GGTTAGGTATAAACTGAGCT+TGG + chr7.4:59383917-59383936 None:intergenic 40.0%
GTCAAGAGATGTTTCTTAGG+AGG - chr7.4:59384066-59384085 MS.gene010744:CDS 40.0%
TCATCCCTCTACTACCAAAA+GGG + chr7.4:59383761-59383780 None:intergenic 40.0%
TGTTAGTGTTAATGTCCACC+CGG - chr7.4:59385024-59385043 MS.gene010744:CDS 40.0%
TTATGCAGGAGTTAGCACTA+AGG - chr7.4:59384609-59384628 MS.gene010744:CDS 40.0%
TTCATCCCTCTACTACCAAA+AGG + chr7.4:59383762-59383781 None:intergenic 40.0%
! AAGAACGGTTTTTGCAAAGG+TGG - chr7.4:59383229-59383248 MS.gene010744:CDS 40.0%
! AGCAAGAACGGTTTTTGCAA+AGG - chr7.4:59383226-59383245 MS.gene010744:CDS 40.0%
! CCACAATTGAGTCTTTTAGC+TGG + chr7.4:59384005-59384024 None:intergenic 40.0%
! GACAAGAGTAGGTTTTTCCA+GGG + chr7.4:59385139-59385158 None:intergenic 40.0%
! GAGAATCTGAAGCAATATGC+TGG - chr7.4:59384713-59384732 MS.gene010744:CDS 40.0%
! TAAAAGGCAGCCCTTTGAAA+AGG + chr7.4:59384350-59384369 None:intergenic 40.0%
! TATGGGGAAGCCTTTTCAAA+GGG - chr7.4:59384337-59384356 MS.gene010744:CDS 40.0%
! TGACAAGAGTAGGTTTTTCC+AGG + chr7.4:59385140-59385159 None:intergenic 40.0%
! TTCACGAATCGAAGCACTAA+AGG + chr7.4:59384881-59384900 None:intergenic 40.0%
!! CAATTGAGTCTTTTAGCTGG+AGG + chr7.4:59384002-59384021 None:intergenic 40.0%
!! GAATCCAAGAAGGGTATCTT+CGG + chr7.4:59384044-59384063 None:intergenic 40.0%
!! GATTTCCCTTTTGGTAGTAG+AGG - chr7.4:59383753-59383772 MS.gene010744:CDS 40.0%
!! GCAGTTGAGAAGCTTGTTTT+GGG - chr7.4:59385085-59385104 MS.gene010744:CDS 40.0%
!! GTAGGAGTGGTTTGTTGATT+TGG + chr7.4:59383318-59383337 None:intergenic 40.0%
!! TTTGCACTCCAGTCTTATTC+CGG - chr7.4:59384980-59384999 MS.gene010744:CDS 40.0%
!!! GGCTGCCTTTTATTTTAAGG+AGG - chr7.4:59384358-59384377 MS.gene010744:CDS 40.0%
AACTAAGCTCGATTTCGTCG+TGG + chr7.4:59384685-59384704 None:intergenic 45.0%
AAGCACCAATCTTGAGCAAG+AGG + chr7.4:59384448-59384467 None:intergenic 45.0%
AATGCAGTGATCTTGAGTGC+AGG + chr7.4:59384647-59384666 None:intergenic 45.0%
AATGGCGCCTAAGCAGAAAA+TGG - chr7.4:59384160-59384179 MS.gene010744:CDS 45.0%
ACTTATAGACGCCGGTAATC+CGG - chr7.4:59384268-59384287 MS.gene010744:CDS 45.0%
AGAACCCTGATGACAAGAGT+AGG + chr7.4:59385150-59385169 None:intergenic 45.0%
AGCACTAAAGGCAGGTATGA+AGG + chr7.4:59384869-59384888 None:intergenic 45.0%
AGCTTCAAGCAATGCTTGGT+TGG + chr7.4:59384522-59384541 None:intergenic 45.0%
AGTTCTGCTTCTTCTCCACA+TGG + chr7.4:59385246-59385265 None:intergenic 45.0%
ATCTTGAGCAAGAGGCTAGT+TGG + chr7.4:59384440-59384459 None:intergenic 45.0%
ATGGCGCCTAAGCAGAAAAT+GGG - chr7.4:59384161-59384180 MS.gene010744:CDS 45.0%
CAAGCAAACCGGAATAAGAC+TGG + chr7.4:59384991-59385010 None:intergenic 45.0%
CAGGAGTTAGCACTAAGGAA+TGG - chr7.4:59384614-59384633 MS.gene010744:CDS 45.0%
CGGGTCAAGAGATGTTTCTT+AGG - chr7.4:59384063-59384082 MS.gene010744:CDS 45.0%
GAGTTAGCACTAAGGAATGG+TGG - chr7.4:59384617-59384636 MS.gene010744:CDS 45.0%
GCAAAGGAAGGATCTCATCT+CGG - chr7.4:59385282-59385301 MS.gene010744:CDS 45.0%
GCACTAAAGGCAGGTATGAA+GGG + chr7.4:59384868-59384887 None:intergenic 45.0%
GCTTCCCCATAGGAGAAATT+TGG + chr7.4:59384328-59384347 None:intergenic 45.0%
GGATAGGAGTTGTGATCGAA+CGG - chr7.4:59384931-59384950 MS.gene010744:CDS 45.0%
TAGTAACTTCACAGAGTCGC+AGG - chr7.4:59385183-59385202 MS.gene010744:CDS 45.0%
TCAACACTGTCTTCCTCACA+CGG - chr7.4:59383345-59383364 MS.gene010744:CDS 45.0%
TCGATCATCTGAAGGACATC+CGG + chr7.4:59385046-59385065 None:intergenic 45.0%
TCTTGACCCGAATCCAAGAA+GGG + chr7.4:59384053-59384072 None:intergenic 45.0%
TGTTGAGGATGAAGTAGGAG+TGG + chr7.4:59383331-59383350 None:intergenic 45.0%
! AACGGTTTTTGCAAAGGTGG+AGG - chr7.4:59383232-59383251 MS.gene010744:CDS 45.0%
! ACGGTTTTTGCAAAGGTGGA+GGG - chr7.4:59383233-59383252 MS.gene010744:CDS 45.0%
! ACTAGCCTCTTGCTCAAGAT+TGG - chr7.4:59384440-59384459 MS.gene010744:CDS 45.0%
! CACTTGTCTTGTGTTGGCAA+AGG - chr7.4:59385266-59385285 MS.gene010744:CDS 45.0%
! CTATGGGGAAGCCTTTTCAA+AGG - chr7.4:59384336-59384355 MS.gene010744:CDS 45.0%
! CTTTGAAAAGGCTTCCCCAT+AGG + chr7.4:59384338-59384357 None:intergenic 45.0%
! GACAGTGTTGAGGATGAAGT+AGG + chr7.4:59383336-59383355 None:intergenic 45.0%
! TGTCTTGTGTTGGCAAAGGA+AGG - chr7.4:59385270-59385289 MS.gene010744:CDS 45.0%
!! GGCAGTTGAGAAGCTTGTTT+TGG - chr7.4:59385084-59385103 MS.gene010744:CDS 45.0%
AAAATGGGGAACCCTGGAAG+CGG - chr7.4:59384176-59384195 MS.gene010744:CDS 50.0%
AAGCAGAAAATGGGGAACCC+TGG - chr7.4:59384170-59384189 MS.gene010744:CDS 50.0%
AATCTCAGCAGCAGTAGCAG+TGG + chr7.4:59383727-59383746 None:intergenic 50.0%
CCACAGCTTCAAGCAATGCT+TGG + chr7.4:59384526-59384545 None:intergenic 50.0%
CGATCATCTGAAGGACATCC+GGG + chr7.4:59385045-59385064 None:intergenic 50.0%
CTCTTGACCCGAATCCAAGA+AGG + chr7.4:59384054-59384073 None:intergenic 50.0%
GAGGCTGAAGCTGAATCTCT+CGG + chr7.4:59383983-59384002 None:intergenic 50.0%
GCATTGCTTGAAGCTGTGGA+AGG - chr7.4:59384527-59384546 MS.gene010744:CDS 50.0%
GCTGCAGAACTTATAGACGC+CGG - chr7.4:59384260-59384279 MS.gene010744:CDS 50.0%
GTGTGAGGAAGACAGTGTTG+AGG + chr7.4:59383346-59383365 None:intergenic 50.0%
TCGATTTCGTCGTGGTGTGA+GGG + chr7.4:59384677-59384696 None:intergenic 50.0%
TGGCGCCTAAGCAGAAAATG+GGG - chr7.4:59384162-59384181 MS.gene010744:CDS 50.0%
TTCTATCCTGCGAGCGCAAA+CGG + chr7.4:59385111-59385130 None:intergenic 50.0%
! ATCGGCTCATCAGTTTCAGC+AGG - chr7.4:59384214-59384233 MS.gene010744:CDS 50.0%
! CCAAGCATTGCTTGAAGCTG+TGG - chr7.4:59384523-59384542 MS.gene010744:CDS 50.0%
! CGAATCGAAGCACTAAAGGC+AGG + chr7.4:59384877-59384896 None:intergenic 50.0%
! GGGTTCCCCATTTTCTGCTT+AGG + chr7.4:59384170-59384189 None:intergenic 50.0%
! TGCAGCTGAGAGTGTGTGAA+AGG + chr7.4:59383954-59383973 None:intergenic 50.0%
!! TGTTTGGTGCAGAGGATTCC+TGG - chr7.4:59385211-59385230 MS.gene010744:CDS 50.0%
AATATCCCGTGCGCGTGTTC+CGG + chr7.4:59384290-59384309 None:intergenic 55.0%
ACGCGATTGCGAAGCAGTTG+TGG - chr7.4:59384811-59384830 MS.gene010744:CDS 55.0%
ACTGCTTCGCAATCGCGTAG+TGG + chr7.4:59384809-59384828 None:intergenic 55.0%
AGCAGCAGTAGCAGTGGTAG+TGG + chr7.4:59383721-59383740 None:intergenic 55.0%
CCATCTGCAGCAGAGGACAA+TGG - chr7.4:59384142-59384161 MS.gene010744:CDS 55.0%
CCATTGTCCTCTGCTGCAGA+TGG + chr7.4:59384145-59384164 None:intergenic 55.0%
CGCAGGATAGAACACTTCCC+TGG - chr7.4:59385119-59385138 MS.gene010744:CDS 55.0%
CTCGATTTCGTCGTGGTGTG+AGG + chr7.4:59384678-59384697 None:intergenic 55.0%
GCTTCTACCGATAGCACCAC+CGG - chr7.4:59383384-59383403 MS.gene010744:CDS 55.0%
GGTGCAGAGGATTCCTGGTA+GGG - chr7.4:59385216-59385235 MS.gene010744:CDS 55.0%
GTGCAGAGGATTCCTGGTAG+GGG - chr7.4:59385217-59385236 MS.gene010744:CDS 55.0%
TCATCTGAAGGACATCCGGG+TGG + chr7.4:59385042-59385061 None:intergenic 55.0%
TCCACATGGAATCCCCTACC+AGG + chr7.4:59385232-59385251 None:intergenic 55.0%
TCCTGGTAGGGGATTCCATG+TGG - chr7.4:59385228-59385247 MS.gene010744:CDS 55.0%
TGGTGCAGAGGATTCCTGGT+AGG - chr7.4:59385215-59385234 MS.gene010744:CDS 55.0%
TTCCTCACCATCTGCAGCAG+AGG - chr7.4:59384135-59384154 MS.gene010744:CDS 55.0%
! AGAGTCGCAGGCAGAGTGTT+TGG - chr7.4:59385195-59385214 MS.gene010744:CDS 55.0%
!! AGGCAGAGTGTTTGGTGCAG+AGG - chr7.4:59385203-59385222 MS.gene010744:CDS 55.0%
GGAACACGCGCACGGGATAT+TGG - chr7.4:59384289-59384308 MS.gene010744:CDS 60.0%
GGTAATCCGGAACACGCGCA+CGG - chr7.4:59384281-59384300 MS.gene010744:CDS 60.0%
GTAATCCGGAACACGCGCAC+GGG - chr7.4:59384282-59384301 MS.gene010744:CDS 60.0%
GTCCTCTGCTGCAGATGGTG+AGG + chr7.4:59384140-59384159 None:intergenic 60.0%
GTGCGCGTGTTCCGGATTAC+CGG + chr7.4:59384282-59384301 None:intergenic 60.0%
TCGCAATCGCGTAGTGGCTG+CGG + chr7.4:59384803-59384822 None:intergenic 60.0%
TCTTCCTCACACGGTAGCGC+CGG - chr7.4:59383354-59383373 MS.gene010744:CDS 60.0%
! CGGTGGCGGCGAAGATGTAT+CGG - chr7.4:59384196-59384215 MS.gene010744:CDS 60.0%
! GTTTTTGTTGGCCGCAGCGC+CGG + chr7.4:59383406-59383425 None:intergenic 60.0%
ACGCGCACGGGATATTGGCG+CGG - chr7.4:59384294-59384313 MS.gene010744:CDS 65.0%
ATGGGGAACCCTGGAAGCGG+TGG - chr7.4:59384179-59384198 MS.gene010744:CDS 65.0%
TTTGGGCCGTTTGCGCTCGC+AGG - chr7.4:59385102-59385121 MS.gene010744:CDS 65.0%
!! ATCGGTAGAAGCGCCGCCTC+CGG + chr7.4:59383376-59383395 None:intergenic 65.0%
CGATAGCACCACCGGCGCTG+CGG - chr7.4:59383392-59383411 MS.gene010744:CDS 70.0%
CTTCGCCGCCACCGCTTCCA+GGG + chr7.4:59384190-59384209 None:intergenic 70.0%
GGGAACCCTGGAAGCGGTGG+CGG - chr7.4:59384182-59384201 MS.gene010744:CDS 70.0%
TCTTCGCCGCCACCGCTTCC+AGG + chr7.4:59384191-59384210 None:intergenic 70.0%
! TCACACGGTAGCGCCGGAGG+CGG - chr7.4:59383360-59383379 MS.gene010744:CDS 70.0%
! TCCTCACACGGTAGCGCCGG+AGG - chr7.4:59383357-59383376 MS.gene010744:CDS 70.0%
! TTTGTTGGCCGCAGCGCCGG+TGG + chr7.4:59383403-59383422 None:intergenic 70.0%
!! CGCAGCGCCGGTGGTGCTAT+CGG + chr7.4:59383394-59383413 None:intergenic 70.0%
GCCTCCGGCGCTACCGTGTG+AGG + chr7.4:59383361-59383380 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 59383123 59385324 59383123 ID=MS.gene010744
chr7.4 mRNA 59383123 59385324 59383123 ID=MS.gene010744.t1;Parent=MS.gene010744
chr7.4 exon 59383123 59385324 59383123 ID=MS.gene010744.t1.exon1;Parent=MS.gene010744.t1
chr7.4 CDS 59383123 59385324 59383123 ID=cds.MS.gene010744.t1;Parent=MS.gene010744.t1
Gene Sequence

>MS.gene010744

ATGAAGGCTATGCCCTTACCCTTTGAAGAATACATAGGAAAAGGTGTGTTAGATTTTGGTTCAAGTGTTGTTGCTTCTTCAGATTCATATTTGTTTTCTCAACAGCAAGAACGGTTTTTGCAAAGGTGGAGGGAAAATTGTTGCTATGCGGGCATTGAGCCCAATTCTGTTGTTGTTTTTGACCTCAAAAAACCAAATCAACAAACCACTCCTACTTCATCCTCAACACTGTCTTCCTCACACGGTAGCGCCGGAGGCGGCGCTTCTACCGATAGCACCACCGGCGCTGCGGCCAACAAAAACATACCACAAATTGAAGGTAAAAGATGTGGAATGGAGGATTGGGAGAGTGTGTTATCTGAATCACCAAGTCAAGATCAAGATCATTCCATATTGAAATTGATAATGGAAGATATTGAAGATGCATCTATGGGATTAAGCAAGCTTTTACAAGTTGGAACTAGTAATTCTCATTCTCAACAAGATGTTGAATTCAATGGTTTTAGTTTTATGGATCAACAAAGTTCTGTACTTGACCCTATTTCTTCAAATGGTAACTTTGTAACTAGCATTGATTCTTCTTCTGTTGCTGCTACCACTACCACTGCTACTGCTGCTGAGATTTGTTCTGATTTCCCTTTTGGTAGTAGAGGGATGAATCAAATTCAAAACCCTAATTTCAGTTCTTCACAAGTTTCACTTTCTCATGGTGGTTTGTTTCATCAGCATCAACAACAATCAATTGGGTCTCTTGATGAGAAGCTACCTCATCAGTTTGTTATGAACCAAAACCAAGCTCAGTTTATACCTAACCCTAGTTTGGTTTTTCCTTTCACACACTCTCAGCTGCAAGAAAACCGAGAGATTCAGCTTCAGCCTCCAGCTAAAAGACTCAATTGTGGAACAAATTATGAAATTCCGAAGATACCCTTCTTGGATTCGGGTCAAGAGATGTTTCTTAGGAGGCAACAACAGCATCAGCAACAGCAACATCAGCAGCAGCTTCAACTGCTTCCTCACCATCTGCAGCAGAGGACAATGGCGCCTAAGCAGAAAATGGGGAACCCTGGAAGCGGTGGCGGCGAAGATGTATCGGCTCATCAGTTTCAGCAGGCTATAATTGATCAGCTTTTCAAGGCTGCAGAACTTATAGACGCCGGTAATCCGGAACACGCGCACGGGATATTGGCGCGGCTCAATCACCAAATTTCTCCTATGGGGAAGCCTTTTCAAAGGGCTGCCTTTTATTTTAAGGAGGCATTTCAATTGCTTCTTCAATCAAATGTCAACAACAGCAACAACAACAGCTTTTCACCAACTAGCCTCTTGCTCAAGATTGGTGCTTATAAATCATTCTCAGAAATCTCACCTGTTCTGCAGTTTTCAAATTTCACTTCCAACCAAGCATTGCTTGAAGCTGTGGAAGGTTTCGATCGAATTCATATAATAGATTTTGATATTGGTTTTGGTGGACAATGGTCTTCATTTATGCAGGAGTTAGCACTAAGGAATGGTGGTGCACCTGCACTCAAGATCACTGCATTTGTTTCGCCCTCACACCACGACGAAATCGAGCTTAGTTTCACTAACGAGAATCTGAAGCAATATGCTGGTGAAATTAACATGTCATTTGAGCTCGAAATTCTGACACTTGAGTCTCTGAATTCTGTTTCGTGGCCGCAGCCACTACGCGATTGCGAAGCAGTTGTGGTTAACTTGCCTATTTGCTCTTTCTCAAATTACCCTTCATACCTGCCTTTAGTGCTTCGATTCGTGAAGCAGCTAATGCCTAAAATTGTCGTAACATTGGATAGGAGTTGTGATCGAACGGATGCACCGTTTCCTCAGCATATGATTTTTGCACTCCAGTCTTATTCCGGTTTGCTTGAATCACTTGATGCTGTTAGTGTTAATGTCCACCCGGATGTCCTTCAGATGATCGAGAAATACTATCTTCAACCGGCAGTTGAGAAGCTTGTTTTGGGCCGTTTGCGCTCGCAGGATAGAACACTTCCCTGGAAAAACCTACTCTTGTCATCAGGGTTCTCGCCGTTGACATTTAGTAACTTCACAGAGTCGCAGGCAGAGTGTTTGGTGCAGAGGATTCCTGGTAGGGGATTCCATGTGGAGAAGAAGCAGAACTCACTTGTCTTGTGTTGGCAAAGGAAGGATCTCATCTCGGTTTCAACTTGGAGATGCTGA
Protein sequence

>MS.gene010744.t1

MKAMPLPFEEYIGKGVLDFGSSVVASSDSYLFSQQQERFLQRWRENCCYAGIEPNSVVVFDLKKPNQQTTPTSSSTLSSSHGSAGGGASTDSTTGAAANKNIPQIEGKRCGMEDWESVLSESPSQDQDHSILKLIMEDIEDASMGLSKLLQVGTSNSHSQQDVEFNGFSFMDQQSSVLDPISSNGNFVTSIDSSSVAATTTTATAAEICSDFPFGSRGMNQIQNPNFSSSQVSLSHGGLFHQHQQQSIGSLDEKLPHQFVMNQNQAQFIPNPSLVFPFTHSQLQENREIQLQPPAKRLNCGTNYEIPKIPFLDSGQEMFLRRQQQHQQQQHQQQLQLLPHHLQQRTMAPKQKMGNPGSGGGEDVSAHQFQQAIIDQLFKAAELIDAGNPEHAHGILARLNHQISPMGKPFQRAAFYFKEAFQLLLQSNVNNSNNNSFSPTSLLLKIGAYKSFSEISPVLQFSNFTSNQALLEAVEGFDRIHIIDFDIGFGGQWSSFMQELALRNGGAPALKITAFVSPSHHDEIELSFTNENLKQYAGEINMSFELEILTLESLNSVSWPQPLRDCEAVVVNLPICSFSNYPSYLPLVLRFVKQLMPKIVVTLDRSCDRTDAPFPQHMIFALQSYSGLLESLDAVSVNVHPDVLQMIEKYYLQPAVEKLVLGRLRSQDRTLPWKNLLLSSGFSPLTFSNFTESQAECLVQRIPGRGFHVEKKQNSLVLCWQRKDLISVSTWRC