Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76644.t1 | XP_013455102.1 | 90.9 | 628 | 53 | 3 | 1 | 627 | 1 | 625 | 1.20E-286 | 995.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76644.t1 | O81316 | 46.1 | 512 | 215 | 13 | 124 | 627 | 97 | 555 | 1.4e-100 | 368.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76644.t1 | A0A072UTD0 | 90.9 | 628 | 53 | 3 | 1 | 627 | 1 | 625 | 8.9e-287 | 995.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene76644.t1 | TF | GRAS |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene76644 | MS.gene010744 | PPI |
MS.gene96423 | MS.gene76644 | PPI |
MS.gene20122 | MS.gene76644 | PPI |
MS.gene82054 | MS.gene76644 | PPI |
MS.gene96424 | MS.gene76644 | PPI |
MS.gene82053 | MS.gene76644 | PPI |
MS.gene76644 | MS.gene010745 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76644.t1 | MTR_4g026485 | 92.038 | 628 | 46 | 3 | 1 | 627 | 1 | 625 | 0.0 | 1103 |
MS.gene76644.t1 | MTR_0092s0100 | 60.046 | 433 | 158 | 5 | 202 | 627 | 305 | 729 | 1.02e-164 | 488 |
MS.gene76644.t1 | MTR_0092s0100 | 38.571 | 210 | 92 | 9 | 1 | 192 | 1 | 191 | 5.37e-13 | 72.8 |
MS.gene76644.t1 | MTR_0092s0100 | 60.046 | 433 | 158 | 5 | 202 | 627 | 308 | 732 | 1.25e-164 | 488 |
MS.gene76644.t1 | MTR_0092s0100 | 38.571 | 210 | 92 | 9 | 1 | 192 | 4 | 194 | 5.67e-13 | 72.4 |
MS.gene76644.t1 | MTR_8g077940 | 34.324 | 370 | 225 | 10 | 269 | 627 | 180 | 542 | 6.56e-54 | 193 |
MS.gene76644.t1 | MTR_7g027190 | 28.169 | 426 | 255 | 15 | 232 | 627 | 270 | 674 | 3.72e-32 | 132 |
MS.gene76644.t1 | MTR_4g077760 | 30.412 | 388 | 219 | 15 | 268 | 626 | 190 | 555 | 1.09e-31 | 130 |
MS.gene76644.t1 | MTR_5g094450 | 27.056 | 377 | 247 | 10 | 272 | 626 | 162 | 532 | 7.27e-30 | 124 |
MS.gene76644.t1 | MTR_5g097480 | 25.490 | 357 | 248 | 8 | 285 | 626 | 191 | 544 | 9.58e-30 | 124 |
MS.gene76644.t1 | MTR_3g065980 | 26.453 | 344 | 222 | 8 | 305 | 626 | 206 | 540 | 2.98e-29 | 122 |
MS.gene76644.t1 | MTR_3g056110 | 25.781 | 384 | 243 | 12 | 270 | 626 | 174 | 542 | 1.56e-28 | 120 |
MS.gene76644.t1 | MTR_4g076020 | 27.606 | 355 | 217 | 10 | 287 | 626 | 100 | 429 | 1.57e-28 | 119 |
MS.gene76644.t1 | MTR_7g074650 | 26.829 | 369 | 233 | 8 | 276 | 626 | 443 | 792 | 5.77e-28 | 120 |
MS.gene76644.t1 | MTR_2g026250 | 25.858 | 379 | 252 | 11 | 270 | 627 | 227 | 597 | 6.48e-26 | 112 |
MS.gene76644.t1 | MTR_4g102790 | 25.762 | 361 | 231 | 11 | 291 | 625 | 312 | 661 | 7.12e-25 | 110 |
MS.gene76644.t1 | MTR_1g069725 | 25.275 | 364 | 233 | 11 | 285 | 627 | 119 | 464 | 7.89e-25 | 108 |
MS.gene76644.t1 | MTR_2g082090 | 25.568 | 352 | 218 | 10 | 302 | 625 | 243 | 578 | 8.43e-25 | 109 |
MS.gene76644.t1 | MTR_4g133660 | 25.066 | 379 | 251 | 10 | 272 | 627 | 176 | 544 | 5.09e-23 | 103 |
MS.gene76644.t1 | MTR_1g029420 | 26.260 | 377 | 246 | 11 | 272 | 626 | 226 | 592 | 1.68e-22 | 102 |
MS.gene76644.t1 | MTR_5g019750 | 28.632 | 234 | 149 | 8 | 403 | 627 | 71 | 295 | 2.10e-21 | 95.5 |
MS.gene76644.t1 | MTR_3g089055 | 24.731 | 372 | 258 | 8 | 272 | 626 | 204 | 570 | 2.40e-21 | 98.6 |
MS.gene76644.t1 | MTR_3g089055 | 24.731 | 372 | 258 | 8 | 272 | 626 | 199 | 565 | 2.79e-21 | 98.6 |
MS.gene76644.t1 | MTR_5g058860 | 25.876 | 371 | 236 | 14 | 287 | 627 | 137 | 498 | 1.09e-20 | 96.3 |
MS.gene76644.t1 | MTR_7g109580 | 24.009 | 429 | 290 | 10 | 230 | 626 | 130 | 554 | 2.03e-20 | 95.5 |
MS.gene76644.t1 | MTR_3g072710 | 28.146 | 302 | 198 | 11 | 339 | 627 | 206 | 501 | 2.29e-20 | 95.1 |
MS.gene76644.t1 | MTR_4g104020 | 24.433 | 397 | 262 | 13 | 258 | 627 | 136 | 521 | 3.16e-20 | 94.7 |
MS.gene76644.t1 | MTR_1g096030 | 26.494 | 385 | 209 | 17 | 291 | 626 | 100 | 459 | 3.68e-20 | 94.4 |
MS.gene76644.t1 | MTR_2g034260 | 24.611 | 386 | 258 | 11 | 267 | 626 | 206 | 584 | 4.03e-19 | 91.7 |
MS.gene76644.t1 | MTR_2g097473 | 22.821 | 390 | 273 | 9 | 253 | 625 | 275 | 653 | 1.18e-18 | 90.5 |
MS.gene76644.t1 | MTR_2g034280 | 25.722 | 381 | 258 | 12 | 267 | 626 | 199 | 575 | 1.21e-18 | 90.1 |
MS.gene76644.t1 | MTR_8g093070 | 26.702 | 382 | 240 | 16 | 265 | 625 | 133 | 495 | 2.81e-18 | 88.6 |
MS.gene76644.t1 | MTR_2g034250 | 25.260 | 384 | 259 | 12 | 267 | 626 | 206 | 585 | 2.36e-17 | 86.3 |
MS.gene76644.t1 | MTR_4g097080 | 22.016 | 377 | 265 | 13 | 272 | 626 | 134 | 503 | 2.94e-17 | 85.5 |
MS.gene76644.t1 | MTR_2g097390 | 24.513 | 359 | 242 | 10 | 287 | 625 | 291 | 640 | 4.21e-17 | 85.5 |
MS.gene76644.t1 | MTR_2g097310 | 25.769 | 260 | 171 | 7 | 287 | 533 | 288 | 538 | 1.54e-16 | 83.6 |
MS.gene76644.t1 | MTR_2g097467 | 22.449 | 392 | 272 | 10 | 253 | 625 | 275 | 653 | 1.60e-16 | 83.6 |
MS.gene76644.t1 | MTR_2g097380 | 25.098 | 255 | 165 | 6 | 287 | 533 | 240 | 476 | 3.62e-16 | 82.4 |
MS.gene76644.t1 | MTR_2g097410 | 22.043 | 372 | 261 | 8 | 276 | 625 | 376 | 740 | 4.84e-16 | 82.4 |
MS.gene76644.t1 | MTR_7g062120 | 21.867 | 407 | 274 | 10 | 250 | 626 | 348 | 740 | 5.55e-16 | 82.0 |
MS.gene76644.t1 | MTR_4g064200 | 22.129 | 357 | 253 | 8 | 287 | 625 | 300 | 649 | 7.10e-15 | 78.6 |
MS.gene76644.t1 | MTR_8g442410 | 22.166 | 397 | 266 | 10 | 260 | 626 | 142 | 525 | 1.61e-14 | 77.0 |
MS.gene76644.t1 | MTR_2g097463 | 21.241 | 419 | 292 | 12 | 231 | 625 | 250 | 654 | 3.27e-14 | 76.3 |
MS.gene76644.t1 | MTR_4g064150 | 22.248 | 427 | 299 | 10 | 222 | 625 | 316 | 732 | 6.48e-14 | 75.5 |
MS.gene76644.t1 | MTR_0092s0060 | 39.267 | 191 | 82 | 8 | 1 | 173 | 1 | 175 | 7.70e-14 | 70.9 |
MS.gene76644.t1 | MTR_2g089100 | 23.325 | 403 | 247 | 14 | 272 | 625 | 53 | 442 | 1.01e-13 | 74.3 |
MS.gene76644.t1 | MTR_2g097350 | 23.398 | 359 | 246 | 10 | 287 | 625 | 290 | 639 | 1.14e-13 | 74.7 |
MS.gene76644.t1 | MTR_4g064120 | 25.954 | 262 | 172 | 7 | 287 | 531 | 270 | 526 | 4.15e-13 | 72.8 |
MS.gene76644.t1 | MTR_5g015490 | 25.000 | 204 | 144 | 3 | 272 | 468 | 115 | 316 | 6.79e-13 | 71.6 |
MS.gene76644.t1 | MTR_4g064180 | 25.573 | 262 | 173 | 7 | 287 | 531 | 270 | 526 | 8.09e-13 | 72.0 |
MS.gene76644.t1 | MTR_2g099110 | 21.680 | 369 | 247 | 10 | 290 | 626 | 93 | 451 | 1.38e-12 | 70.5 |
MS.gene76644.t1 | MTR_4g064160 | 19.093 | 419 | 303 | 11 | 235 | 625 | 273 | 683 | 1.00e-11 | 68.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76644.t1 | AT4G00150 | 42.089 | 632 | 281 | 18 | 4 | 627 | 1 | 555 | 3.52e-133 | 402 |
MS.gene76644.t1 | AT3G60630 | 39.124 | 662 | 326 | 26 | 4 | 627 | 1 | 623 | 4.79e-109 | 342 |
MS.gene76644.t1 | AT2G45160 | 38.484 | 673 | 332 | 22 | 4 | 627 | 1 | 640 | 1.63e-108 | 340 |
MS.gene76644.t1 | AT4G36710 | 31.294 | 425 | 259 | 12 | 220 | 626 | 76 | 485 | 2.16e-52 | 187 |
MS.gene76644.t1 | AT5G66770 | 29.275 | 386 | 248 | 13 | 258 | 626 | 207 | 584 | 2.67e-36 | 144 |
MS.gene76644.t1 | AT2G04890 | 27.957 | 372 | 239 | 9 | 272 | 626 | 54 | 413 | 1.95e-34 | 135 |
MS.gene76644.t1 | AT3G50650 | 27.390 | 387 | 240 | 12 | 264 | 626 | 173 | 542 | 1.44e-29 | 123 |
MS.gene76644.t1 | AT2G01570 | 29.210 | 291 | 193 | 7 | 345 | 626 | 295 | 581 | 1.88e-29 | 124 |
MS.gene76644.t1 | AT5G48150 | 25.210 | 357 | 250 | 8 | 285 | 626 | 136 | 490 | 2.08e-29 | 122 |
MS.gene76644.t1 | AT5G48150 | 25.210 | 357 | 250 | 8 | 285 | 626 | 136 | 490 | 2.08e-29 | 122 |
MS.gene76644.t1 | AT5G48150 | 25.210 | 357 | 250 | 8 | 285 | 626 | 136 | 490 | 2.08e-29 | 122 |
MS.gene76644.t1 | AT5G48150 | 25.210 | 357 | 250 | 8 | 285 | 626 | 136 | 490 | 2.08e-29 | 122 |
MS.gene76644.t1 | AT3G54220 | 27.198 | 364 | 239 | 7 | 276 | 625 | 298 | 649 | 5.72e-29 | 122 |
MS.gene76644.t1 | AT3G03450 | 27.397 | 292 | 198 | 5 | 345 | 626 | 258 | 545 | 8.56e-29 | 121 |
MS.gene76644.t1 | AT5G17490 | 27.174 | 368 | 243 | 10 | 272 | 626 | 161 | 516 | 3.52e-28 | 119 |
MS.gene76644.t1 | AT5G41920 | 25.936 | 374 | 241 | 9 | 272 | 626 | 44 | 400 | 2.94e-27 | 115 |
MS.gene76644.t1 | AT4G17230 | 26.772 | 381 | 253 | 10 | 265 | 626 | 152 | 525 | 3.91e-27 | 116 |
MS.gene76644.t1 | AT4G17230 | 26.772 | 381 | 253 | 10 | 265 | 626 | 152 | 525 | 3.91e-27 | 116 |
MS.gene76644.t1 | AT1G14920 | 25.000 | 364 | 257 | 8 | 272 | 626 | 173 | 529 | 5.69e-27 | 115 |
MS.gene76644.t1 | AT1G66350 | 26.531 | 294 | 193 | 8 | 345 | 627 | 226 | 507 | 1.07e-26 | 114 |
MS.gene76644.t1 | AT1G50600 | 23.786 | 412 | 266 | 10 | 245 | 626 | 133 | 526 | 1.60e-26 | 114 |
MS.gene76644.t1 | AT1G50600 | 23.786 | 412 | 266 | 10 | 245 | 626 | 204 | 597 | 6.23e-26 | 113 |
MS.gene76644.t1 | AT1G50600 | 23.786 | 412 | 266 | 10 | 245 | 626 | 208 | 601 | 7.59e-26 | 112 |
MS.gene76644.t1 | AT1G21450 | 24.054 | 370 | 264 | 7 | 272 | 626 | 226 | 593 | 8.21e-25 | 109 |
MS.gene76644.t1 | AT1G63100 | 26.287 | 369 | 226 | 13 | 291 | 625 | 297 | 653 | 6.40e-22 | 100 |
MS.gene76644.t1 | AT1G63100 | 26.287 | 369 | 226 | 13 | 291 | 625 | 272 | 628 | 8.27e-22 | 100 |
MS.gene76644.t1 | AT1G55580 | 24.590 | 305 | 215 | 6 | 337 | 626 | 141 | 445 | 2.31e-19 | 91.7 |
MS.gene76644.t1 | AT4G08250 | 26.578 | 301 | 202 | 10 | 339 | 625 | 181 | 476 | 3.12e-19 | 91.7 |
MS.gene76644.t1 | AT5G59450 | 22.841 | 359 | 257 | 7 | 286 | 626 | 242 | 598 | 5.21e-19 | 91.7 |
MS.gene76644.t1 | AT3G46600 | 23.011 | 352 | 251 | 8 | 291 | 626 | 232 | 579 | 1.11e-15 | 80.9 |
MS.gene76644.t1 | AT3G46600 | 23.011 | 352 | 251 | 8 | 291 | 626 | 200 | 547 | 3.02e-15 | 79.3 |
MS.gene76644.t1 | AT3G46600 | 23.011 | 352 | 251 | 8 | 291 | 626 | 24 | 371 | 3.42e-15 | 78.2 |
MS.gene76644.t1 | AT4G37650 | 20.052 | 384 | 277 | 8 | 272 | 626 | 147 | 529 | 5.07e-15 | 78.6 |
MS.gene76644.t1 | AT1G07530 | 20.513 | 390 | 296 | 8 | 250 | 625 | 375 | 764 | 5.94e-15 | 79.0 |
MS.gene76644.t1 | AT1G07520 | 24.542 | 273 | 186 | 7 | 276 | 531 | 323 | 592 | 3.65e-13 | 73.2 |
MS.gene76644.t1 | AT1G07520 | 26.238 | 202 | 138 | 5 | 276 | 468 | 324 | 523 | 3.99e-13 | 73.2 |
MS.gene76644.t1 | AT1G07520 | 24.542 | 273 | 186 | 7 | 276 | 531 | 159 | 428 | 4.77e-13 | 72.4 |
MS.gene76644.t1 | AT1G07520 | 24.542 | 273 | 186 | 7 | 276 | 531 | 159 | 428 | 4.77e-13 | 72.4 |
MS.gene76644.t1 | AT1G50420 | 29.016 | 193 | 120 | 4 | 272 | 451 | 58 | 246 | 9.39e-12 | 68.2 |
MS.gene76644.t1 | AT2G29060 | 21.508 | 358 | 259 | 10 | 287 | 625 | 337 | 691 | 1.47e-11 | 68.2 |
MS.gene76644.t1 | AT2G29060 | 21.508 | 358 | 259 | 10 | 287 | 625 | 300 | 654 | 1.67e-11 | 67.8 |
MS.gene76644.t1 | AT2G29065 | 21.925 | 374 | 265 | 10 | 276 | 625 | 257 | 627 | 2.29e-11 | 67.4 |
Find 120 sgRNAs with CRISPR-Local
Find 155 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTAATGCCTTTCAATCTTT+TGG | 0.183368 | 4.1:+72521494 | None:intergenic |
TTGCAATGTGTTACCGCTTT+TGG | 0.210898 | 4.1:-72522514 | MS.gene76644:CDS |
TGTGGAGCCCACTTCAGTTC+TGG | 0.271815 | 4.1:-72522952 | MS.gene76644:CDS |
TTGAAATTCCTCAAAAGTTA+AGG | 0.300516 | 4.1:+72523094 | None:intergenic |
CATGTTATTGATTTCGATAT+CGG | 0.319001 | 4.1:-72521988 | MS.gene76644:CDS |
GACAATGTTGAAGATGAAAA+TGG | 0.331833 | 4.1:+72522906 | None:intergenic |
TCCAAAGTTACGACCACTTT+CGG | 0.339309 | 4.1:+72521631 | None:intergenic |
TGATGGATTACTTATGAAAC+TGG | 0.357205 | 4.1:+72521693 | None:intergenic |
ATTGATTTCGATATCGGGTT+TGG | 0.379458 | 4.1:-72521982 | MS.gene76644:CDS |
TGAAATTCCTCAAAAGTTAA+GGG | 0.383228 | 4.1:+72523095 | None:intergenic |
GGTTCAAGCGCAAGGGATAT+TGG | 0.384808 | 4.1:-72522256 | MS.gene76644:CDS |
ATCAACCTCAGCAACAAAAT+TGG | 0.386235 | 4.1:-72523001 | MS.gene76644:CDS |
CTTCCACTCTTGTGCTATGC+TGG | 0.398096 | 4.1:-72521288 | MS.gene76644:CDS |
TGAATGAAGCATTAACTGTA+AGG | 0.398966 | 4.1:+72522164 | None:intergenic |
GGAAGCTCAAGCCGAGTGTT+TGG | 0.423122 | 4.1:-72521353 | MS.gene76644:CDS |
CAAATATACTCTGCTGAAGC+TGG | 0.434387 | 4.1:+72522322 | None:intergenic |
ATTTCAAGTGAAGGGAATGT+TGG | 0.436223 | 4.1:-72523078 | MS.gene76644:CDS |
TTACTTATGAAACTGGAAAC+AGG | 0.436478 | 4.1:+72521700 | None:intergenic |
TGGTGGTGGTGGTATGAGAA+TGG | 0.439587 | 4.1:-72522763 | MS.gene76644:CDS |
TCAAGCCCTCATTGAAGCCT+TGG | 0.443453 | 4.1:-72522028 | MS.gene76644:CDS |
GCCGAAAGTGGTCGTAACTT+TGG | 0.444136 | 4.1:-72521632 | MS.gene76644:CDS |
CTTTGAAAAGGCTTACCAAT+TGG | 0.446191 | 4.1:+72522210 | None:intergenic |
AATATCCCTTGCGCTTGAAC+CGG | 0.446789 | 4.1:+72522258 | None:intergenic |
ATGTTATTGATTTCGATATC+GGG | 0.446925 | 4.1:-72521987 | MS.gene76644:CDS |
TAATGTGAAGGGAGAGAAAC+CGG | 0.461239 | 4.1:+72521387 | None:intergenic |
AAGCCGAGTGTTTGGTTCAA+AGG | 0.464484 | 4.1:-72521345 | MS.gene76644:CDS |
TTGCAATTCTCAGGAATGAA+TGG | 0.464532 | 4.1:+72522531 | None:intergenic |
TGGTATGAGAATGGAGGATT+GGG | 0.465608 | 4.1:-72522754 | MS.gene76644:CDS |
TAGAAAGAAGCCCTTTGAAA+AGG | 0.471306 | 4.1:+72522198 | None:intergenic |
AAGTTGGCAAACTGAAGAAC+AGG | 0.472756 | 4.1:+72522060 | None:intergenic |
AGCCGAGTGTTTGGTTCAAA+GGG | 0.474056 | 4.1:-72521344 | MS.gene76644:CDS |
GAAGATGAAAATGGAGAACT+AGG | 0.474745 | 4.1:+72522915 | None:intergenic |
ATGGTTGAACATGGACGCTT+CGG | 0.477095 | 4.1:-72522580 | MS.gene76644:CDS |
AATCACCAGCTCTCACCAAT+TGG | 0.485962 | 4.1:-72522225 | MS.gene76644:CDS |
GCTGATAGAAGCTGGTTATC+CGG | 0.485962 | 4.1:-72522277 | MS.gene76644:CDS |
CTTGCCATCATGTCCTCTAC+CGG | 0.490539 | 4.1:-72521764 | MS.gene76644:CDS |
GGCTTGATTACAAGTAAAGT+TGG | 0.491191 | 4.1:+72522044 | None:intergenic |
CAGTTAATGCTTCATTCAAA+CGG | 0.491869 | 4.1:-72522159 | MS.gene76644:CDS |
AACTCATCTCAATTTCAACT+TGG | 0.495720 | 4.1:-72521255 | MS.gene76644:CDS |
TTTGAGGAATTTCAAGTGAA+GGG | 0.497110 | 4.1:-72523086 | MS.gene76644:CDS |
AGGAACATGTTTCTTCAGTC+CGG | 0.498389 | 4.1:-72521406 | MS.gene76644:CDS |
CCTTTCCAAGGCTTCAATGA+GGG | 0.498450 | 4.1:+72522023 | None:intergenic |
GGTAACACATTGCAATTCTC+AGG | 0.500098 | 4.1:+72522522 | None:intergenic |
GTGGTATGAGAATGGAGGAT+TGG | 0.504718 | 4.1:-72522755 | MS.gene76644:CDS |
TTTGATAGTAATGAAGCCAT+TGG | 0.505073 | 4.1:-72521733 | MS.gene76644:CDS |
TCCATTTGCGAAGCAGCAAA+AGG | 0.505688 | 4.1:-72522379 | MS.gene76644:CDS |
GTAATTTGTCACGCTGGTTG+TGG | 0.506339 | 4.1:+72521437 | None:intergenic |
CTGAAGAACAGGTGATATCT+CGG | 0.507582 | 4.1:+72522071 | None:intergenic |
CTTCACATTAAGCAACTTCA+CGG | 0.507744 | 4.1:-72521374 | MS.gene76644:CDS |
GATGTTGAAGACCCTTATGC+TGG | 0.508840 | 4.1:-72522693 | MS.gene76644:CDS |
AAATAACAATACTAATTCAA+TGG | 0.509695 | 4.1:-72522847 | MS.gene76644:CDS |
TCCACTTGAAATCCTCTCAC+AGG | 0.520356 | 4.1:+72521319 | None:intergenic |
CGTGAAGTTGCTTAATGTGA+AGG | 0.521119 | 4.1:+72521375 | None:intergenic |
TCTTGAATCCAGAACTGAAG+TGG | 0.526232 | 4.1:+72522944 | None:intergenic |
CTGGTCAAGAAGTGTTTGCT+AGG | 0.526401 | 4.1:-72522488 | MS.gene76644:CDS |
CTCAATCTCGTTGCAAGACG+AGG | 0.528947 | 4.1:+72521876 | None:intergenic |
CTGGATGCTTGCATCATCTC+CGG | 0.537282 | 4.1:+72522341 | None:intergenic |
TTGTCATCTTCTCATGGTAG+TGG | 0.544818 | 4.1:-72522888 | MS.gene76644:CDS |
ATCTTGCAAAGTGGTGGTTG+TGG | 0.551252 | 4.1:-72522660 | MS.gene76644:CDS |
TGCTAGGAGACATCAGCAGC+AGG | 0.551740 | 4.1:-72522472 | MS.gene76644:CDS |
GGTTATCCGGTTCAAGCGCA+AGG | 0.552039 | 4.1:-72522264 | MS.gene76644:CDS |
TCAACATTGTCATCTTCTCA+TGG | 0.552805 | 4.1:-72522894 | MS.gene76644:CDS |
AATTCGATCGAACCTTTCCA+AGG | 0.555850 | 4.1:+72522011 | None:intergenic |
GCTTACCAATTGGTGAGAGC+TGG | 0.557459 | 4.1:+72522220 | None:intergenic |
AAGGTGAGTTCTAGTACTAC+CGG | 0.560768 | 4.1:-72522360 | MS.gene76644:CDS |
CTCTTGTGCTATGCTGGCAG+AGG | 0.560950 | 4.1:-72521282 | MS.gene76644:CDS |
CCCTCATTGAAGCCTTGGAA+AGG | 0.561376 | 4.1:-72522023 | MS.gene76644:CDS |
AAAGCAGCTAAGGCCGAAAG+TGG | 0.562649 | 4.1:-72521644 | MS.gene76644:CDS |
ACTGCTGAGCTGATAGAAGC+TGG | 0.568676 | 4.1:-72522285 | MS.gene76644:CDS |
ATGTACTCCAAAAGATTGAA+AGG | 0.570089 | 4.1:-72521501 | MS.gene76644:CDS |
GTTCAAAGGGCACCTGTGAG+AGG | 0.570717 | 4.1:-72521331 | MS.gene76644:CDS |
AGAGCCACAGGGAAGCATGA+TGG | 0.571215 | 4.1:+72521676 | None:intergenic |
CATCATTTGAAAGATGAGCA+AGG | 0.573001 | 4.1:+72522811 | None:intergenic |
TCTCATGGTAGTGGTAGTAA+TGG | 0.576556 | 4.1:-72522879 | MS.gene76644:CDS |
GTGAAGTTGCTTAATGTGAA+GGG | 0.579228 | 4.1:+72521376 | None:intergenic |
ACCATCAACAAAATCATCCT+CGG | 0.579390 | 4.1:-72521463 | MS.gene76644:CDS |
TGAAGAAACATGTTCCTCCA+TGG | 0.581165 | 4.1:+72521412 | None:intergenic |
CAGCATAGCACAAGAGTGGA+AGG | 0.583062 | 4.1:+72521289 | None:intergenic |
TCAAAGAAATGACCCGGTAG+AGG | 0.583745 | 4.1:+72521751 | None:intergenic |
AGAACATGAACGACATTGGT+GGG | 0.584347 | 4.1:+72521577 | None:intergenic |
TGGATCATCAACAACAACAA+TGG | 0.586807 | 4.1:-72522599 | MS.gene76644:CDS |
ACCTTTCCAAGGCTTCAATG+AGG | 0.587226 | 4.1:+72522022 | None:intergenic |
AACAAAATCTTGCAAAGTGG+TGG | 0.589673 | 4.1:-72522666 | MS.gene76644:CDS |
AAGAACATGAACGACATTGG+TGG | 0.589769 | 4.1:+72521576 | None:intergenic |
TGGGAAGAGAAACATCCATT+CGG | 0.590729 | 4.1:+72521596 | None:intergenic |
AACAGGAAAGTTCACACCAA+TGG | 0.593516 | 4.1:+72521717 | None:intergenic |
CTTGAATCCAGAACTGAAGT+GGG | 0.594064 | 4.1:+72522945 | None:intergenic |
TTGAAGAACATGAACGACAT+TGG | 0.594485 | 4.1:+72521573 | None:intergenic |
AGCGTGACAAATTACCTCCA+TGG | 0.597025 | 4.1:-72521429 | MS.gene76644:CDS |
GAGATTGTACTAAGAAGTAA+CGG | 0.599321 | 4.1:-72521934 | MS.gene76644:CDS |
CTGCCAGCATAGCACAAGAG+TGG | 0.610500 | 4.1:+72521285 | None:intergenic |
TGGTGGTGGTATGAGAATGG+AGG | 0.610885 | 4.1:-72522760 | MS.gene76644:CDS |
TAAAGAAGATTATTGCTATG+TGG | 0.612360 | 4.1:-72522970 | MS.gene76644:CDS |
ACAACAACAATGGTTGAACA+TGG | 0.613222 | 4.1:-72522589 | MS.gene76644:CDS |
TTGCCATCATGTCCTCTACC+GGG | 0.614713 | 4.1:-72521763 | MS.gene76644:CDS |
TGACCCGGTAGAGGACATGA+TGG | 0.615427 | 4.1:+72521760 | None:intergenic |
TCACCCAAGAAAACTTGAGT+CGG | 0.615608 | 4.1:-72521846 | MS.gene76644:CDS |
TTCAAACGGTAACAACCTCA+CGG | 0.615881 | 4.1:-72522145 | MS.gene76644:CDS |
ATGAGAATGGAGGATTGGGA+AGG | 0.628687 | 4.1:-72522750 | MS.gene76644:CDS |
ATGGAGGTAATTTGTCACGC+TGG | 0.629161 | 4.1:+72521431 | None:intergenic |
GTTATCCGGTTCAAGCGCAA+GGG | 0.631360 | 4.1:-72522263 | MS.gene76644:CDS |
AAGATGAAAATGGAGAACTA+GGG | 0.633076 | 4.1:+72522916 | None:intergenic |
ACAGCAGTAATCTTAAGTGA+AGG | 0.636223 | 4.1:+72521907 | None:intergenic |
TGCTGCTGCAGATGATGATG+AGG | 0.646414 | 4.1:+72522429 | None:intergenic |
TCAATCTCGTTGCAAGACGA+GGG | 0.646604 | 4.1:+72521877 | None:intergenic |
AAGCGCAAGGGATATTGGCG+CGG | 0.648472 | 4.1:-72522251 | MS.gene76644:CDS |
TGCCCTTTGAACCAAACACT+CGG | 0.651926 | 4.1:+72521342 | None:intergenic |
ACCTGTGAGAGGATTTCAAG+TGG | 0.654432 | 4.1:-72521320 | MS.gene76644:CDS |
ATGGACGCTTCGGTTCAACA+AGG | 0.660128 | 4.1:-72522570 | MS.gene76644:CDS |
AGATGATGATGAGGAAACAA+TGG | 0.660838 | 4.1:+72522438 | None:intergenic |
ATATCGGGTTTGGAGTACAA+TGG | 0.666838 | 4.1:-72521972 | MS.gene76644:CDS |
TTACTATCAAAGAAATGACC+CGG | 0.669847 | 4.1:+72521745 | None:intergenic |
CACGCTGGTTGTGGTGACCG+AGG | 0.670125 | 4.1:+72521446 | None:intergenic |
TCAACAACAACAACAGTCGT+CGG | 0.673800 | 4.1:-72522406 | MS.gene76644:CDS |
TCTTGACCAGAATCCAAAAG+CGG | 0.685854 | 4.1:+72522501 | None:intergenic |
TGGACGCTTCGGTTCAACAA+GGG | 0.687015 | 4.1:-72522569 | MS.gene76644:CDS |
AGAAACATGTTCCTCCATGG+AGG | 0.701239 | 4.1:+72521415 | None:intergenic |
TAATCCATCATGCTTCCCTG+TGG | 0.706732 | 4.1:-72521680 | MS.gene76644:CDS |
TTGAACAAAATCTTGCAAAG+TGG | 0.719051 | 4.1:-72522669 | MS.gene76644:CDS |
GTGACAAATTACCTCCATGG+AGG | 0.762900 | 4.1:-72521426 | MS.gene76644:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAACAATACTAATTCAA+TGG | - | chr4.1:72521506-72521525 | MS.gene76644:CDS | 15.0% |
!!! | ATTAGTTTCATTTTCAAAAT+TGG | - | chr4.1:72522242-72522261 | MS.gene76644:CDS | 15.0% |
!!! | ATTTTGAAAATGAAACTAAT+CGG | + | chr4.1:72522242-72522261 | None:intergenic | 15.0% |
! | TAAAGAAGATTATTGCTATG+TGG | - | chr4.1:72521383-72521402 | MS.gene76644:CDS | 25.0% |
! | TGAAATTCCTCAAAAGTTAA+GGG | + | chr4.1:72521261-72521280 | None:intergenic | 25.0% |
! | TTGAAATTCCTCAAAAGTTA+AGG | + | chr4.1:72521262-72521281 | None:intergenic | 25.0% |
!!! | ATGTTATTGATTTCGATATC+GGG | - | chr4.1:72522366-72522385 | MS.gene76644:CDS | 25.0% |
!!! | CATGTTATTGATTTCGATAT+CGG | - | chr4.1:72522365-72522384 | MS.gene76644:CDS | 25.0% |
!!! | TCACTTTTGAGGTTAATTAT+GGG | - | chr4.1:72521636-72521655 | MS.gene76644:CDS | 25.0% |
!!! | TCTCAAAATGTTGATTTTCA+TGG | - | chr4.1:72521717-72521736 | MS.gene76644:CDS | 25.0% |
!!! | TTCATTTTTTAAAGCAGCTA+AGG | - | chr4.1:72522699-72522718 | MS.gene76644:CDS | 25.0% |
AACTCATCTCAATTTCAACT+TGG | - | chr4.1:72523098-72523117 | MS.gene76644:CDS | 30.0% | |
AAGATGAAAATGGAGAACTA+GGG | + | chr4.1:72521440-72521459 | None:intergenic | 30.0% | |
AATAGTGAAGAAAAATGTGG+TGG | - | chr4.1:72521567-72521586 | MS.gene76644:CDS | 30.0% | |
ATGTACTCCAAAAGATTGAA+AGG | - | chr4.1:72522852-72522871 | MS.gene76644:CDS | 30.0% | |
CAGTTAATGCTTCATTCAAA+CGG | - | chr4.1:72522194-72522213 | MS.gene76644:CDS | 30.0% | |
GACAATGTTGAAGATGAAAA+TGG | + | chr4.1:72521450-72521469 | None:intergenic | 30.0% | |
GAGAATAGTGAAGAAAAATG+TGG | - | chr4.1:72521564-72521583 | MS.gene76644:CDS | 30.0% | |
GAGATTGTACTAAGAAGTAA+CGG | - | chr4.1:72522419-72522438 | MS.gene76644:CDS | 30.0% | |
TTAAAAAATGAAGAGCCACA+GGG | + | chr4.1:72522691-72522710 | None:intergenic | 30.0% | |
TTACTATCAAAGAAATGACC+CGG | + | chr4.1:72522611-72522630 | None:intergenic | 30.0% | |
TTACTTATGAAACTGGAAAC+AGG | + | chr4.1:72522656-72522675 | None:intergenic | 30.0% | |
TTGAACAAAATCTTGCAAAG+TGG | - | chr4.1:72521684-72521703 | MS.gene76644:CDS | 30.0% | |
TTTAAAAAATGAAGAGCCAC+AGG | + | chr4.1:72522692-72522711 | None:intergenic | 30.0% | |
! | AATTGGTAAGCCTTTTCAAA+GGG | - | chr4.1:72522145-72522164 | MS.gene76644:CDS | 30.0% |
! | ATTTTGTTCAATCCAGCATA+AGG | + | chr4.1:72521675-72521694 | None:intergenic | 30.0% |
! | TGAATGAAGCATTAACTGTA+AGG | + | chr4.1:72522192-72522211 | None:intergenic | 30.0% |
! | TGTAATGCCTTTCAATCTTT+TGG | + | chr4.1:72522862-72522881 | None:intergenic | 30.0% |
! | TTTGAGGAATTTCAAGTGAA+GGG | - | chr4.1:72521267-72521286 | MS.gene76644:CDS | 30.0% |
! | TTTGATAGTAATGAAGCCAT+TGG | - | chr4.1:72522620-72522639 | MS.gene76644:CDS | 30.0% |
! | TTTTGTTCAATCCAGCATAA+GGG | + | chr4.1:72521674-72521693 | None:intergenic | 30.0% |
!! | TGATGGATTACTTATGAAAC+TGG | + | chr4.1:72522663-72522682 | None:intergenic | 30.0% |
!! | TTTTGAGGAATTTCAAGTGA+AGG | - | chr4.1:72521266-72521285 | MS.gene76644:CDS | 30.0% |
!!! | CAAAATGTTGATTTTCATGG+TGG | - | chr4.1:72521720-72521739 | MS.gene76644:CDS | 30.0% |
!!! | GTCACTTTTGAGGTTAATTA+TGG | - | chr4.1:72521635-72521654 | MS.gene76644:CDS | 30.0% |
AACAAAATCTTGCAAAGTGG+TGG | - | chr4.1:72521687-72521706 | MS.gene76644:CDS | 35.0% | |
ACAACAACAATGGTTGAACA+TGG | - | chr4.1:72521764-72521783 | MS.gene76644:CDS | 35.0% | |
ACAGCAGTAATCTTAAGTGA+AGG | + | chr4.1:72522449-72522468 | None:intergenic | 35.0% | |
ACCATCAACAAAATCATCCT+CGG | - | chr4.1:72522890-72522909 | MS.gene76644:CDS | 35.0% | |
ATCAACCTCAGCAACAAAAT+TGG | - | chr4.1:72521352-72521371 | MS.gene76644:CDS | 35.0% | |
CATCATTTGAAAGATGAGCA+AGG | + | chr4.1:72521545-72521564 | None:intergenic | 35.0% | |
CTTCACATTAAGCAACTTCA+CGG | - | chr4.1:72522979-72522998 | MS.gene76644:CDS | 35.0% | |
GAAGATGAAAATGGAGAACT+AGG | + | chr4.1:72521441-72521460 | None:intergenic | 35.0% | |
GGCTTGATTACAAGTAAAGT+TGG | + | chr4.1:72522312-72522331 | None:intergenic | 35.0% | |
GTGAAGTTGCTTAATGTGAA+GGG | + | chr4.1:72522980-72522999 | None:intergenic | 35.0% | |
TCAACATTGTCATCTTCTCA+TGG | - | chr4.1:72521459-72521478 | MS.gene76644:CDS | 35.0% | |
TGGATCATCAACAACAACAA+TGG | - | chr4.1:72521754-72521773 | MS.gene76644:CDS | 35.0% | |
TTGAAGAACATGAACGACAT+TGG | + | chr4.1:72522783-72522802 | None:intergenic | 35.0% | |
TTGCAATTCTCAGGAATGAA+TGG | + | chr4.1:72521825-72521844 | None:intergenic | 35.0% | |
! | AATGACCAATTTTGTTGCTG+AGG | + | chr4.1:72521360-72521379 | None:intergenic | 35.0% |
! | AGATGATGATGAGGAAACAA+TGG | + | chr4.1:72521918-72521937 | None:intergenic | 35.0% |
! | ATTGATTTCGATATCGGGTT+TGG | - | chr4.1:72522371-72522390 | MS.gene76644:CDS | 35.0% |
! | ATTTCAAGTGAAGGGAATGT+TGG | - | chr4.1:72521275-72521294 | MS.gene76644:CDS | 35.0% |
! | CAATTGGTAAGCCTTTTCAA+AGG | - | chr4.1:72522144-72522163 | MS.gene76644:CDS | 35.0% |
! | CTTTGAAAAGGCTTACCAAT+TGG | + | chr4.1:72522146-72522165 | None:intergenic | 35.0% |
! | TAGAAAGAAGCCCTTTGAAA+AGG | + | chr4.1:72522158-72522177 | None:intergenic | 35.0% |
!! | GTTGATTTTCATGGTGGTTT+TGG | - | chr4.1:72521726-72521745 | MS.gene76644:CDS | 35.0% |
!!! | AGGATGATTTTGTTGATGGT+TGG | + | chr4.1:72522890-72522909 | None:intergenic | 35.0% |
!!! | ATACCGACTCAAGTTTTCTT+GGG | + | chr4.1:72522513-72522532 | None:intergenic | 35.0% |
!!! | TGATTTTGTTGATGGTTGGT+TGG | + | chr4.1:72522886-72522905 | None:intergenic | 35.0% |
AACAGGAAAGTTCACACCAA+TGG | + | chr4.1:72522639-72522658 | None:intergenic | 40.0% | |
AAGAACATGAACGACATTGG+TGG | + | chr4.1:72522780-72522799 | None:intergenic | 40.0% | |
AAGTTGGCAAACTGAAGAAC+AGG | + | chr4.1:72522296-72522315 | None:intergenic | 40.0% | |
AATTCGATCGAACCTTTCCA+AGG | + | chr4.1:72522345-72522364 | None:intergenic | 40.0% | |
AGAACATGAACGACATTGGT+GGG | + | chr4.1:72522779-72522798 | None:intergenic | 40.0% | |
AGGAACATGTTTCTTCAGTC+CGG | - | chr4.1:72522947-72522966 | MS.gene76644:CDS | 40.0% | |
AGTGAAGAAAAATGTGGTGG+TGG | - | chr4.1:72521570-72521589 | MS.gene76644:CDS | 40.0% | |
CAAATATACTCTGCTGAAGC+TGG | + | chr4.1:72522034-72522053 | None:intergenic | 40.0% | |
CGTGAAGTTGCTTAATGTGA+AGG | + | chr4.1:72522981-72523000 | None:intergenic | 40.0% | |
CTGAAGAACAGGTGATATCT+CGG | + | chr4.1:72522285-72522304 | None:intergenic | 40.0% | |
CTTGAATCCAGAACTGAAGT+GGG | + | chr4.1:72521411-72521430 | None:intergenic | 40.0% | |
GGTAACACATTGCAATTCTC+AGG | + | chr4.1:72521834-72521853 | None:intergenic | 40.0% | |
TAATGTGAAGGGAGAGAAAC+CGG | + | chr4.1:72522969-72522988 | None:intergenic | 40.0% | |
TCAACAACAACAACAGTCGT+CGG | - | chr4.1:72521947-72521966 | MS.gene76644:CDS | 40.0% | |
TCACCCAAGAAAACTTGAGT+CGG | - | chr4.1:72522507-72522526 | MS.gene76644:CDS | 40.0% | |
TCCAAAGTTACGACCACTTT+CGG | + | chr4.1:72522725-72522744 | None:intergenic | 40.0% | |
TCTTGAATCCAGAACTGAAG+TGG | + | chr4.1:72521412-72521431 | None:intergenic | 40.0% | |
TCTTGACCAGAATCCAAAAG+CGG | + | chr4.1:72521855-72521874 | None:intergenic | 40.0% | |
TGAAGAAACATGTTCCTCCA+TGG | + | chr4.1:72522944-72522963 | None:intergenic | 40.0% | |
TGGGAAGAGAAACATCCATT+CGG | + | chr4.1:72522760-72522779 | None:intergenic | 40.0% | |
TGGTATGAGAATGGAGGATT+GGG | - | chr4.1:72521599-72521618 | MS.gene76644:CDS | 40.0% | |
TTCAAACGGTAACAACCTCA+CGG | - | chr4.1:72522208-72522227 | MS.gene76644:CDS | 40.0% | |
TTGTCATCTTCTCATGGTAG+TGG | - | chr4.1:72521465-72521484 | MS.gene76644:CDS | 40.0% | |
! | AAGGTGAGTTCTAGTACTAC+CGG | - | chr4.1:72521993-72522012 | MS.gene76644:CDS | 40.0% |
! | ACCGAGGATGATTTTGTTGA+TGG | + | chr4.1:72522894-72522913 | None:intergenic | 40.0% |
! | ATATCGGGTTTGGAGTACAA+TGG | - | chr4.1:72522381-72522400 | MS.gene76644:CDS | 40.0% |
! | TTGCAATGTGTTACCGCTTT+TGG | - | chr4.1:72521839-72521858 | MS.gene76644:CDS | 40.0% |
!! | TCTCATGGTAGTGGTAGTAA+TGG | - | chr4.1:72521474-72521493 | MS.gene76644:CDS | 40.0% |
!!! | CAATCTTTTGGAGTACATCG+AGG | + | chr4.1:72522850-72522869 | None:intergenic | 40.0% |
!!! | CATACCGACTCAAGTTTTCT+TGG | + | chr4.1:72522514-72522533 | None:intergenic | 40.0% |
!!! | GTCAAGATCAGTCACTTTTG+AGG | - | chr4.1:72521625-72521644 | MS.gene76644:CDS | 40.0% |
!!! | TCATGGTGGTTTTGGAGTTT+TGG | - | chr4.1:72521734-72521753 | MS.gene76644:CDS | 40.0% |
AATATCCCTTGCGCTTGAAC+CGG | + | chr4.1:72522098-72522117 | None:intergenic | 45.0% | |
AATCACCAGCTCTCACCAAT+TGG | - | chr4.1:72522128-72522147 | MS.gene76644:CDS | 45.0% | |
ACCTGTGAGAGGATTTCAAG+TGG | - | chr4.1:72523033-72523052 | MS.gene76644:CDS | 45.0% | |
ACCTTTCCAAGGCTTCAATG+AGG | + | chr4.1:72522334-72522353 | None:intergenic | 45.0% | |
AGAAACATGTTCCTCCATGG+AGG | + | chr4.1:72522941-72522960 | None:intergenic | 45.0% | |
AGCGTGACAAATTACCTCCA+TGG | - | chr4.1:72522924-72522943 | MS.gene76644:CDS | 45.0% | |
ATCTTGCAAAGTGGTGGTTG+TGG | - | chr4.1:72521693-72521712 | MS.gene76644:CDS | 45.0% | |
ATGAGAATGGAGGATTGGGA+AGG | - | chr4.1:72521603-72521622 | MS.gene76644:CDS | 45.0% | |
ATGGTTGAACATGGACGCTT+CGG | - | chr4.1:72521773-72521792 | MS.gene76644:CDS | 45.0% | |
CCTTTCCAAGGCTTCAATGA+GGG | + | chr4.1:72522333-72522352 | None:intergenic | 45.0% | |
GATGTTGAAGACCCTTATGC+TGG | - | chr4.1:72521660-72521679 | MS.gene76644:CDS | 45.0% | |
GCTGATAGAAGCTGGTTATC+CGG | - | chr4.1:72522076-72522095 | MS.gene76644:CDS | 45.0% | |
GGACAAAAACTGTGACCGAA+TGG | - | chr4.1:72522742-72522761 | MS.gene76644:CDS | 45.0% | |
GTGACAAATTACCTCCATGG+AGG | - | chr4.1:72522927-72522946 | MS.gene76644:CDS | 45.0% | |
GTGGTATGAGAATGGAGGAT+TGG | - | chr4.1:72521598-72521617 | MS.gene76644:CDS | 45.0% | |
TAATCCATCATGCTTCCCTG+TGG | - | chr4.1:72522673-72522692 | MS.gene76644:CDS | 45.0% | |
TCAAAGAAATGACCCGGTAG+AGG | + | chr4.1:72522605-72522624 | None:intergenic | 45.0% | |
TCAATCTCGTTGCAAGACGA+GGG | + | chr4.1:72522479-72522498 | None:intergenic | 45.0% | |
TCCACTTGAAATCCTCTCAC+AGG | + | chr4.1:72523037-72523056 | None:intergenic | 45.0% | |
TCCATTTGCGAAGCAGCAAA+AGG | - | chr4.1:72521974-72521993 | MS.gene76644:CDS | 45.0% | |
TGCCCTTTGAACCAAACACT+CGG | + | chr4.1:72523014-72523033 | None:intergenic | 45.0% | |
! | AAGCCGAGTGTTTGGTTCAA+AGG | - | chr4.1:72523008-72523027 | MS.gene76644:CDS | 45.0% |
! | AGCCGAGTGTTTGGTTCAAA+GGG | - | chr4.1:72523009-72523028 | MS.gene76644:CDS | 45.0% |
! | ATGGAGGTAATTTGTCACGC+TGG | + | chr4.1:72522925-72522944 | None:intergenic | 45.0% |
! | GGCTTTGCCCTTAACTTTTG+AGG | - | chr4.1:72521251-72521270 | MS.gene76644:CDS | 45.0% |
! | GTAATTTGTCACGCTGGTTG+TGG | + | chr4.1:72522919-72522938 | None:intergenic | 45.0% |
!! | ACCTTTTGCTGCTTCGCAAA+TGG | + | chr4.1:72521978-72521997 | None:intergenic | 45.0% |
!! | CTGGTCAAGAAGTGTTTGCT+AGG | - | chr4.1:72521865-72521884 | MS.gene76644:CDS | 45.0% |
!! | GAAGAAAAATGTGGTGGTGG+TGG | - | chr4.1:72521573-72521592 | MS.gene76644:CDS | 45.0% |
!! | GTGTTACCGCTTTTGGATTC+TGG | - | chr4.1:72521846-72521865 | MS.gene76644:CDS | 45.0% |
AAAGCAGCTAAGGCCGAAAG+TGG | - | chr4.1:72522709-72522728 | MS.gene76644:CDS | 50.0% | |
ACTGCTGAGCTGATAGAAGC+TGG | - | chr4.1:72522068-72522087 | MS.gene76644:CDS | 50.0% | |
ATGGACGCTTCGGTTCAACA+AGG | - | chr4.1:72521783-72521802 | MS.gene76644:CDS | 50.0% | |
CAGCATAGCACAAGAGTGGA+AGG | + | chr4.1:72523067-72523086 | None:intergenic | 50.0% | |
CCCTCATTGAAGCCTTGGAA+AGG | - | chr4.1:72522330-72522349 | MS.gene76644:CDS | 50.0% | |
CTCAATCTCGTTGCAAGACG+AGG | + | chr4.1:72522480-72522499 | None:intergenic | 50.0% | |
CTGGATGCTTGCATCATCTC+CGG | + | chr4.1:72522015-72522034 | None:intergenic | 50.0% | |
CTTCCACTCTTGTGCTATGC+TGG | - | chr4.1:72523065-72523084 | MS.gene76644:CDS | 50.0% | |
CTTGCCATCATGTCCTCTAC+CGG | - | chr4.1:72522589-72522608 | MS.gene76644:CDS | 50.0% | |
GCCGAAAGTGGTCGTAACTT+TGG | - | chr4.1:72522721-72522740 | MS.gene76644:CDS | 50.0% | |
GCTTACCAATTGGTGAGAGC+TGG | + | chr4.1:72522136-72522155 | None:intergenic | 50.0% | |
GGTTCAAGCGCAAGGGATAT+TGG | - | chr4.1:72522097-72522116 | MS.gene76644:CDS | 50.0% | |
GTTATCCGGTTCAAGCGCAA+GGG | - | chr4.1:72522090-72522109 | MS.gene76644:CDS | 50.0% | |
TAATCGGCGAAAAAGCCGTG+AGG | + | chr4.1:72522226-72522245 | None:intergenic | 50.0% | |
TCAAGCCCTCATTGAAGCCT+TGG | - | chr4.1:72522325-72522344 | MS.gene76644:CDS | 50.0% | |
TGGACGCTTCGGTTCAACAA+GGG | - | chr4.1:72521784-72521803 | MS.gene76644:CDS | 50.0% | |
TTGCCATCATGTCCTCTACC+GGG | - | chr4.1:72522590-72522609 | MS.gene76644:CDS | 50.0% | |
! | TGCTGCTGCAGATGATGATG+AGG | + | chr4.1:72521927-72521946 | None:intergenic | 50.0% |
!! | GAAAAATGTGGTGGTGGTGG+TGG | - | chr4.1:72521576-72521595 | MS.gene76644:CDS | 50.0% |
!! | TGGTGGTGGTATGAGAATGG+AGG | - | chr4.1:72521593-72521612 | MS.gene76644:CDS | 50.0% |
!! | TGGTGGTGGTGGTATGAGAA+TGG | - | chr4.1:72521590-72521609 | MS.gene76644:CDS | 50.0% |
AAGCGCAAGGGATATTGGCG+CGG | - | chr4.1:72522102-72522121 | MS.gene76644:CDS | 55.0% | |
CTCTTGTGCTATGCTGGCAG+AGG | - | chr4.1:72523071-72523090 | MS.gene76644:CDS | 55.0% | |
CTGCCAGCATAGCACAAGAG+TGG | + | chr4.1:72523071-72523090 | None:intergenic | 55.0% | |
GGAAGCTCAAGCCGAGTGTT+TGG | - | chr4.1:72523000-72523019 | MS.gene76644:CDS | 55.0% | |
GGTTATCCGGTTCAAGCGCA+AGG | - | chr4.1:72522089-72522108 | MS.gene76644:CDS | 55.0% | |
TGACCCGGTAGAGGACATGA+TGG | + | chr4.1:72522596-72522615 | None:intergenic | 55.0% | |
TGCTAGGAGACATCAGCAGC+AGG | - | chr4.1:72521881-72521900 | MS.gene76644:CDS | 55.0% | |
TGTGGAGCCCACTTCAGTTC+TGG | - | chr4.1:72521401-72521420 | MS.gene76644:CDS | 55.0% | |
! | AGAGCCACAGGGAAGCATGA+TGG | + | chr4.1:72522680-72522699 | None:intergenic | 55.0% |
!! | AAATGTGGTGGTGGTGGTGG+TGG | - | chr4.1:72521579-72521598 | MS.gene76644:CDS | 55.0% |
!! | GTTCAAAGGGCACCTGTGAG+AGG | - | chr4.1:72523022-72523041 | MS.gene76644:CDS | 55.0% |
! | CACGCTGGTTGTGGTGACCG+AGG | + | chr4.1:72522910-72522929 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 72521246 | 72523129 | 72521246 | ID=MS.gene76644 |
chr4.1 | mRNA | 72521246 | 72523129 | 72521246 | ID=MS.gene76644.t1;Parent=MS.gene76644 |
chr4.1 | exon | 72521246 | 72523129 | 72521246 | ID=MS.gene76644.t1.exon1;Parent=MS.gene76644.t1 |
chr4.1 | CDS | 72521246 | 72523129 | 72521246 | ID=cds.MS.gene76644.t1;Parent=MS.gene76644.t1 |
Gene Sequence |
Protein sequence |