Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82161.t1 | XP_013455102.1 | 93 | 628 | 40 | 3 | 1 | 627 | 1 | 625 | 2.00E-292 | 1014.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82161.t1 | O81316 | 44.7 | 515 | 223 | 11 | 121 | 627 | 95 | 555 | 6.1e-101 | 369.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82161.t1 | A0A072UTD0 | 93.0 | 628 | 40 | 3 | 1 | 627 | 1 | 625 | 1.4e-292 | 1014.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene82161.t1 | TF | GRAS |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene82054 | MS.gene82161 | PPI |
MS.gene82161 | MS.gene010745 | PPI |
MS.gene82161 | MS.gene20122 | PPI |
MS.gene96424 | MS.gene82161 | PPI |
MS.gene82053 | MS.gene82161 | PPI |
MS.gene82161 | MS.gene010744 | PPI |
MS.gene96423 | MS.gene82161 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82161.t1 | MTR_4g026485 | 94.427 | 628 | 31 | 3 | 1 | 627 | 1 | 625 | 0.0 | 1107 |
MS.gene82161.t1 | MTR_0092s0100 | 60.682 | 440 | 155 | 6 | 197 | 627 | 299 | 729 | 4.15e-168 | 497 |
MS.gene82161.t1 | MTR_0092s0100 | 35.266 | 207 | 102 | 10 | 1 | 191 | 1 | 191 | 2.66e-12 | 70.5 |
MS.gene82161.t1 | MTR_0092s0100 | 60.682 | 440 | 155 | 6 | 197 | 627 | 302 | 732 | 4.45e-168 | 497 |
MS.gene82161.t1 | MTR_0092s0100 | 35.266 | 207 | 102 | 10 | 1 | 191 | 4 | 194 | 2.68e-12 | 70.5 |
MS.gene82161.t1 | MTR_8g077940 | 34.324 | 370 | 225 | 10 | 269 | 627 | 180 | 542 | 1.23e-53 | 192 |
MS.gene82161.t1 | MTR_4g077760 | 30.670 | 388 | 218 | 15 | 268 | 626 | 190 | 555 | 9.71e-33 | 133 |
MS.gene82161.t1 | MTR_7g027190 | 28.169 | 426 | 255 | 15 | 232 | 627 | 270 | 674 | 3.05e-32 | 132 |
MS.gene82161.t1 | MTR_5g094450 | 27.321 | 377 | 246 | 10 | 272 | 626 | 162 | 532 | 2.67e-31 | 128 |
MS.gene82161.t1 | MTR_3g065980 | 26.260 | 377 | 247 | 8 | 272 | 626 | 173 | 540 | 1.37e-30 | 126 |
MS.gene82161.t1 | MTR_3g056110 | 26.042 | 384 | 242 | 12 | 270 | 626 | 174 | 542 | 4.15e-30 | 125 |
MS.gene82161.t1 | MTR_5g097480 | 25.405 | 370 | 258 | 8 | 272 | 626 | 178 | 544 | 6.39e-30 | 124 |
MS.gene82161.t1 | MTR_7g074650 | 27.100 | 369 | 232 | 8 | 276 | 626 | 443 | 792 | 6.26e-29 | 123 |
MS.gene82161.t1 | MTR_4g076020 | 27.174 | 368 | 228 | 10 | 274 | 626 | 87 | 429 | 9.29e-28 | 117 |
MS.gene82161.t1 | MTR_2g026250 | 25.858 | 379 | 252 | 11 | 270 | 627 | 227 | 597 | 1.83e-27 | 117 |
MS.gene82161.t1 | MTR_2g082090 | 24.582 | 419 | 265 | 12 | 237 | 625 | 181 | 578 | 4.09e-26 | 113 |
MS.gene82161.t1 | MTR_1g069725 | 26.344 | 372 | 241 | 11 | 272 | 627 | 110 | 464 | 4.27e-25 | 109 |
MS.gene82161.t1 | MTR_4g102790 | 25.789 | 380 | 245 | 11 | 272 | 625 | 293 | 661 | 5.41e-25 | 110 |
MS.gene82161.t1 | MTR_4g133660 | 25.330 | 379 | 250 | 10 | 272 | 627 | 176 | 544 | 1.23e-24 | 108 |
MS.gene82161.t1 | MTR_3g089055 | 25.806 | 372 | 254 | 8 | 272 | 626 | 204 | 570 | 1.93e-24 | 108 |
MS.gene82161.t1 | MTR_3g089055 | 25.806 | 372 | 254 | 8 | 272 | 626 | 199 | 565 | 2.31e-24 | 107 |
MS.gene82161.t1 | MTR_1g029420 | 26.330 | 376 | 247 | 10 | 272 | 626 | 226 | 592 | 3.06e-24 | 107 |
MS.gene82161.t1 | MTR_5g058860 | 25.490 | 408 | 263 | 15 | 252 | 627 | 100 | 498 | 1.15e-21 | 99.4 |
MS.gene82161.t1 | MTR_4g104020 | 24.937 | 397 | 260 | 13 | 258 | 627 | 136 | 521 | 4.90e-21 | 97.4 |
MS.gene82161.t1 | MTR_5g019750 | 28.205 | 234 | 150 | 8 | 403 | 627 | 71 | 295 | 7.49e-21 | 94.0 |
MS.gene82161.t1 | MTR_7g109580 | 23.543 | 429 | 292 | 10 | 230 | 626 | 130 | 554 | 1.04e-20 | 96.7 |
MS.gene82161.t1 | MTR_3g072710 | 27.907 | 301 | 200 | 10 | 339 | 627 | 206 | 501 | 1.44e-20 | 95.9 |
MS.gene82161.t1 | MTR_2g097473 | 22.705 | 414 | 287 | 10 | 234 | 625 | 251 | 653 | 2.29e-19 | 92.8 |
MS.gene82161.t1 | MTR_8g093070 | 27.225 | 382 | 238 | 16 | 265 | 625 | 133 | 495 | 4.47e-19 | 91.3 |
MS.gene82161.t1 | MTR_4g097080 | 22.812 | 377 | 262 | 13 | 272 | 626 | 134 | 503 | 5.04e-19 | 90.9 |
MS.gene82161.t1 | MTR_2g034260 | 24.548 | 387 | 257 | 11 | 267 | 626 | 206 | 584 | 6.48e-19 | 91.3 |
MS.gene82161.t1 | MTR_2g097390 | 24.800 | 375 | 251 | 12 | 272 | 625 | 276 | 640 | 1.31e-18 | 90.5 |
MS.gene82161.t1 | MTR_7g062120 | 22.439 | 410 | 268 | 11 | 250 | 626 | 348 | 740 | 1.60e-18 | 90.1 |
MS.gene82161.t1 | MTR_2g034280 | 25.459 | 381 | 259 | 12 | 267 | 626 | 199 | 575 | 3.08e-18 | 89.0 |
MS.gene82161.t1 | MTR_2g097310 | 23.529 | 374 | 257 | 10 | 272 | 625 | 273 | 637 | 9.48e-18 | 87.4 |
MS.gene82161.t1 | MTR_2g097410 | 22.043 | 372 | 261 | 8 | 276 | 625 | 376 | 740 | 1.85e-17 | 87.0 |
MS.gene82161.t1 | MTR_2g034250 | 25.000 | 384 | 260 | 12 | 267 | 626 | 206 | 585 | 5.47e-17 | 85.1 |
MS.gene82161.t1 | MTR_2g097467 | 22.194 | 392 | 273 | 10 | 253 | 625 | 275 | 653 | 5.59e-17 | 85.1 |
MS.gene82161.t1 | MTR_2g097380 | 25.098 | 255 | 165 | 6 | 287 | 533 | 240 | 476 | 1.87e-16 | 83.2 |
MS.gene82161.t1 | MTR_2g097350 | 23.670 | 376 | 254 | 13 | 272 | 625 | 275 | 639 | 1.00e-15 | 81.3 |
MS.gene82161.t1 | MTR_4g064200 | 22.546 | 377 | 257 | 10 | 272 | 625 | 285 | 649 | 1.24e-15 | 80.9 |
MS.gene82161.t1 | MTR_2g097463 | 21.378 | 421 | 289 | 14 | 231 | 625 | 250 | 654 | 2.39e-15 | 80.1 |
MS.gene82161.t1 | MTR_2g089100 | 23.573 | 403 | 246 | 14 | 272 | 625 | 53 | 442 | 2.45e-15 | 79.3 |
MS.gene82161.t1 | MTR_8g442410 | 22.166 | 397 | 266 | 10 | 260 | 626 | 142 | 525 | 2.97e-15 | 79.3 |
MS.gene82161.t1 | MTR_5g015490 | 20.888 | 383 | 268 | 9 | 272 | 626 | 115 | 490 | 9.89e-15 | 77.4 |
MS.gene82161.t1 | MTR_4g064150 | 22.038 | 422 | 296 | 10 | 227 | 625 | 321 | 732 | 1.58e-14 | 77.4 |
MS.gene82161.t1 | MTR_4g064120 | 25.271 | 277 | 185 | 7 | 272 | 531 | 255 | 526 | 1.31e-13 | 74.3 |
MS.gene82161.t1 | MTR_4g064180 | 25.448 | 279 | 182 | 8 | 272 | 531 | 255 | 526 | 2.71e-13 | 73.6 |
MS.gene82161.t1 | MTR_2g099110 | 22.222 | 369 | 245 | 10 | 290 | 626 | 93 | 451 | 2.73e-13 | 72.8 |
MS.gene82161.t1 | MTR_0092s0060 | 35.638 | 188 | 92 | 9 | 1 | 172 | 1 | 175 | 8.55e-13 | 67.8 |
MS.gene82161.t1 | MTR_4g064160 | 18.900 | 418 | 303 | 11 | 236 | 625 | 274 | 683 | 5.01e-12 | 69.3 |
MS.gene82161.t1 | MTR_5g009080 | 27.746 | 173 | 117 | 3 | 272 | 440 | 57 | 225 | 3.24e-11 | 66.2 |
MS.gene82161.t1 | MTR_4g076140 | 31.720 | 186 | 111 | 6 | 272 | 448 | 49 | 227 | 5.45e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene82161.t1 | AT4G00150 | 42.047 | 635 | 277 | 16 | 4 | 627 | 1 | 555 | 1.19e-133 | 403 |
MS.gene82161.t1 | AT2G45160 | 39.525 | 673 | 325 | 24 | 4 | 627 | 1 | 640 | 3.84e-112 | 350 |
MS.gene82161.t1 | AT3G60630 | 39.879 | 662 | 321 | 25 | 4 | 627 | 1 | 623 | 4.45e-110 | 344 |
MS.gene82161.t1 | AT4G36710 | 32.447 | 376 | 221 | 11 | 270 | 626 | 124 | 485 | 6.72e-52 | 186 |
MS.gene82161.t1 | AT5G66770 | 29.534 | 386 | 247 | 13 | 258 | 626 | 207 | 584 | 4.32e-37 | 146 |
MS.gene82161.t1 | AT2G04890 | 28.495 | 372 | 237 | 9 | 272 | 626 | 54 | 413 | 1.51e-36 | 142 |
MS.gene82161.t1 | AT3G50650 | 27.907 | 387 | 238 | 12 | 264 | 626 | 173 | 542 | 1.04e-30 | 127 |
MS.gene82161.t1 | AT2G01570 | 26.902 | 368 | 245 | 9 | 272 | 626 | 225 | 581 | 2.24e-30 | 126 |
MS.gene82161.t1 | AT3G03450 | 25.410 | 366 | 258 | 6 | 272 | 626 | 184 | 545 | 1.82e-29 | 123 |
MS.gene82161.t1 | AT5G48150 | 24.403 | 377 | 268 | 8 | 265 | 626 | 116 | 490 | 2.07e-29 | 122 |
MS.gene82161.t1 | AT5G48150 | 24.403 | 377 | 268 | 8 | 265 | 626 | 116 | 490 | 2.07e-29 | 122 |
MS.gene82161.t1 | AT5G48150 | 24.403 | 377 | 268 | 8 | 265 | 626 | 116 | 490 | 2.07e-29 | 122 |
MS.gene82161.t1 | AT5G48150 | 24.403 | 377 | 268 | 8 | 265 | 626 | 116 | 490 | 2.07e-29 | 122 |
MS.gene82161.t1 | AT5G17490 | 27.717 | 368 | 241 | 10 | 272 | 626 | 161 | 516 | 2.73e-29 | 122 |
MS.gene82161.t1 | AT3G54220 | 27.198 | 364 | 239 | 7 | 276 | 625 | 298 | 649 | 5.62e-29 | 122 |
MS.gene82161.t1 | AT4G17230 | 27.297 | 381 | 251 | 10 | 265 | 626 | 152 | 525 | 5.79e-29 | 121 |
MS.gene82161.t1 | AT4G17230 | 27.297 | 381 | 251 | 10 | 265 | 626 | 152 | 525 | 5.79e-29 | 121 |
MS.gene82161.t1 | AT1G66350 | 25.272 | 368 | 247 | 10 | 272 | 627 | 156 | 507 | 3.10e-28 | 119 |
MS.gene82161.t1 | AT1G14920 | 25.549 | 364 | 255 | 8 | 272 | 626 | 173 | 529 | 4.30e-28 | 119 |
MS.gene82161.t1 | AT1G50600 | 23.786 | 412 | 271 | 10 | 238 | 626 | 135 | 526 | 2.06e-27 | 117 |
MS.gene82161.t1 | AT1G21450 | 24.865 | 370 | 261 | 7 | 272 | 626 | 226 | 593 | 3.77e-27 | 116 |
MS.gene82161.t1 | AT1G50600 | 23.786 | 412 | 271 | 10 | 238 | 626 | 206 | 597 | 6.78e-27 | 115 |
MS.gene82161.t1 | AT1G50600 | 23.786 | 412 | 271 | 10 | 238 | 626 | 210 | 601 | 8.57e-27 | 115 |
MS.gene82161.t1 | AT5G41920 | 25.401 | 374 | 243 | 9 | 272 | 626 | 44 | 400 | 6.24e-26 | 110 |
MS.gene82161.t1 | AT1G63100 | 25.849 | 383 | 238 | 13 | 277 | 625 | 283 | 653 | 3.39e-22 | 101 |
MS.gene82161.t1 | AT1G63100 | 25.849 | 383 | 238 | 13 | 277 | 625 | 258 | 628 | 3.90e-22 | 101 |
MS.gene82161.t1 | AT5G59450 | 22.520 | 373 | 269 | 7 | 272 | 626 | 228 | 598 | 9.56e-20 | 94.0 |
MS.gene82161.t1 | AT4G08250 | 26.246 | 301 | 203 | 10 | 339 | 625 | 181 | 476 | 2.93e-18 | 88.6 |
MS.gene82161.t1 | AT1G55580 | 24.590 | 305 | 215 | 6 | 337 | 626 | 141 | 445 | 4.75e-18 | 87.8 |
MS.gene82161.t1 | AT3G46600 | 22.642 | 371 | 267 | 8 | 272 | 626 | 213 | 579 | 1.41e-16 | 84.0 |
MS.gene82161.t1 | AT4G37650 | 20.312 | 384 | 276 | 8 | 272 | 626 | 147 | 529 | 3.69e-16 | 82.4 |
MS.gene82161.t1 | AT3G46600 | 22.642 | 371 | 267 | 8 | 272 | 626 | 181 | 547 | 3.98e-16 | 82.4 |
MS.gene82161.t1 | AT3G46600 | 22.642 | 371 | 267 | 8 | 272 | 626 | 5 | 371 | 4.65e-16 | 80.9 |
MS.gene82161.t1 | AT1G07530 | 20.531 | 414 | 310 | 10 | 231 | 625 | 351 | 764 | 4.81e-16 | 82.4 |
MS.gene82161.t1 | AT1G07520 | 22.487 | 378 | 257 | 12 | 276 | 625 | 323 | 692 | 1.87e-14 | 77.4 |
MS.gene82161.t1 | AT1G07520 | 22.487 | 378 | 257 | 12 | 276 | 625 | 324 | 693 | 1.97e-14 | 77.0 |
MS.gene82161.t1 | AT1G07520 | 26.238 | 202 | 138 | 5 | 276 | 468 | 159 | 358 | 3.11e-14 | 76.3 |
MS.gene82161.t1 | AT1G07520 | 26.238 | 202 | 138 | 5 | 276 | 468 | 159 | 358 | 3.11e-14 | 76.3 |
MS.gene82161.t1 | AT2G29065 | 21.958 | 378 | 268 | 10 | 272 | 625 | 253 | 627 | 8.95e-13 | 71.6 |
MS.gene82161.t1 | AT1G50420 | 29.016 | 193 | 120 | 4 | 272 | 451 | 58 | 246 | 1.87e-12 | 70.5 |
Find 119 sgRNAs with CRISPR-Local
Find 153 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTAATGCCTTTCAATCTTT+TGG | 0.183368 | 4.2:+76656551 | None:intergenic |
TTACAATGTGTTACCGCTTT+TGG | 0.235424 | 4.2:-76657574 | MS.gene82161:CDS |
TTGAAATTCCTCAAAAGTTA+AGG | 0.300516 | 4.2:+76658151 | None:intergenic |
CATGTTATTGATTTCGATAT+CGG | 0.319001 | 4.2:-76657045 | MS.gene82161:CDS |
GACAATGTTGAAGATGAAAA+TGG | 0.331833 | 4.2:+76657963 | None:intergenic |
TCCAAAGTTACGACCACTTT+CGG | 0.339309 | 4.2:+76656688 | None:intergenic |
ATCAACCTCAACAACAAAAT+TGG | 0.340640 | 4.2:-76658058 | MS.gene82161:CDS |
TGATGGATTACTTATGAAAC+TGG | 0.357205 | 4.2:+76656750 | None:intergenic |
CTTCCTTTCTTGTGCTATGC+TGG | 0.377991 | 4.2:-76656345 | MS.gene82161:CDS |
ATTGATTTCGATATCGGGTT+TGG | 0.379458 | 4.2:-76657039 | MS.gene82161:CDS |
TGAAATTCCTCAAAAGTTAA+GGG | 0.383228 | 4.2:+76658152 | None:intergenic |
GGTTCAAGCGCAAGGGATAT+TGG | 0.384808 | 4.2:-76657313 | MS.gene82161:CDS |
TGAATGAAGCATTAACTGTA+AGG | 0.398966 | 4.2:+76657221 | None:intergenic |
AGGAACATGTTTCTTCAGTC+TGG | 0.417336 | 4.2:-76656463 | MS.gene82161:CDS |
AGCTGAGTGTTTGGTTCAAA+GGG | 0.419565 | 4.2:-76656401 | MS.gene82161:CDS |
GTGGTATGAGAATGGATGAT+TGG | 0.425628 | 4.2:-76657815 | MS.gene82161:CDS |
GGAAGCTCAAGCTGAGTGTT+TGG | 0.430829 | 4.2:-76656410 | MS.gene82161:CDS |
CAAATATACTCTGCTGAAGC+TGG | 0.434387 | 4.2:+76657379 | None:intergenic |
ATTTCAAGTGAAGGGAATGT+TGG | 0.436223 | 4.2:-76658135 | MS.gene82161:CDS |
TTACTTATGAAACTGGAAAC+AGG | 0.436478 | 4.2:+76656757 | None:intergenic |
AATATCCCTTGCGCTTGAAC+CGG | 0.438162 | 4.2:+76657315 | None:intergenic |
TCAAGCCCTCATTGAAGCCT+TGG | 0.443453 | 4.2:-76657085 | MS.gene82161:CDS |
GCCGAAAGTGGTCGTAACTT+TGG | 0.444136 | 4.2:-76656689 | MS.gene82161:CDS |
CTTTGAAAAGGCTTACCAAT+TGG | 0.446191 | 4.2:+76657267 | None:intergenic |
CTCAATCTCGTTGCAAGAAG+AGG | 0.446647 | 4.2:+76656933 | None:intergenic |
ATGTTATTGATTTCGATATC+GGG | 0.446925 | 4.2:-76657044 | MS.gene82161:CDS |
TTGTAATTCTCAGGAATGAA+TGG | 0.453236 | 4.2:+76657591 | None:intergenic |
TGGTGGTGGTGGTATGAGAA+TGG | 0.455369 | 4.2:-76657823 | MS.gene82161:CDS |
AAGCTGAGTGTTTGGTTCAA+AGG | 0.455607 | 4.2:-76656402 | MS.gene82161:CDS |
GGTAACACATTGTAATTCTC+AGG | 0.461882 | 4.2:+76657582 | None:intergenic |
TAGAAAGAAGCCCTTTGAAA+AGG | 0.471306 | 4.2:+76657255 | None:intergenic |
AAGTTGGCAAACTGAAGAAC+AGG | 0.472756 | 4.2:+76657117 | None:intergenic |
AACTCATCTCAGTTTCAACT+TGG | 0.473456 | 4.2:-76656312 | MS.gene82161:CDS |
CTTCACATTCAGCAAATTCA+CGG | 0.474423 | 4.2:-76656431 | MS.gene82161:CDS |
GAAGATGAAAATGGAGAACT+AGG | 0.474745 | 4.2:+76657972 | None:intergenic |
ATGGTTGAACATGGACGCTT+CGG | 0.477095 | 4.2:-76657640 | MS.gene82161:CDS |
AATCACCAGCTCTCACCAAT+TGG | 0.485962 | 4.2:-76657282 | MS.gene82161:CDS |
CTTGCCATCATGTCCTCTAC+CGG | 0.490539 | 4.2:-76656821 | MS.gene82161:CDS |
GGCTTGATTACAAGTAAAGT+TGG | 0.491191 | 4.2:+76657101 | None:intergenic |
CAGTTAATGCTTCATTCAAA+CGG | 0.491869 | 4.2:-76657216 | MS.gene82161:CDS |
TTTGAGGAATTTCAAGTGAA+GGG | 0.497110 | 4.2:-76658143 | MS.gene82161:CDS |
GCTGATAGAAGCTGGTAATC+CGG | 0.498189 | 4.2:-76657334 | MS.gene82161:CDS |
CCTTTCCAAGGCTTCAATGA+GGG | 0.498450 | 4.2:+76657080 | None:intergenic |
TTCAAATAACAATAGTTCAA+TGG | 0.500751 | 4.2:-76657907 | MS.gene82161:CDS |
TTTGATAGTAATGAAGCCAT+TGG | 0.505073 | 4.2:-76656790 | MS.gene82161:CDS |
GTAATTTGTCACGCTGGTTG+TGG | 0.506339 | 4.2:+76656494 | None:intergenic |
CTGAAGAACAGGTGATATCT+CGG | 0.507582 | 4.2:+76657128 | None:intergenic |
TCCAATTGCGAAGCAGCAAA+AGG | 0.508239 | 4.2:-76657436 | MS.gene82161:CDS |
GATGTTGAAGACCCTTATGC+TGG | 0.508840 | 4.2:-76657753 | MS.gene82161:CDS |
TCTTGAATCAAGAACTGAAG+TGG | 0.511894 | 4.2:+76658001 | None:intergenic |
CAACCGACGACTGCTGTTGT+TGG | 0.513401 | 4.2:+76657460 | None:intergenic |
TCCACTTGAAATCCTCTCAC+AGG | 0.520356 | 4.2:+76656376 | None:intergenic |
CTGGTCAAGAAGTGTTTGCT+AGG | 0.526401 | 4.2:-76657548 | MS.gene82161:CDS |
TTCTTGTGCTATGCTGGCAG+AGG | 0.535704 | 4.2:-76656339 | MS.gene82161:CDS |
CTGGATGCTTGCATCATCTC+CGG | 0.537282 | 4.2:+76657398 | None:intergenic |
CTGCCAGCATAGCACAAGAA+AGG | 0.540587 | 4.2:+76656342 | None:intergenic |
TGAACGACATTGGTGGGAAG+AGG | 0.544276 | 4.2:+76656640 | None:intergenic |
TTGTCATCTTCTCATGGTAG+TGG | 0.544818 | 4.2:-76657945 | MS.gene82161:CDS |
TGGTATGAGAATGGATGATT+GGG | 0.551007 | 4.2:-76657814 | MS.gene82161:CDS |
ATCTTGCAAAGTGGTGGTTG+TGG | 0.551252 | 4.2:-76657720 | MS.gene82161:CDS |
TGCTAGGAGACATCAGCAGC+AGG | 0.551740 | 4.2:-76657532 | MS.gene82161:CDS |
GGTAATCCGGTTCAAGCGCA+AGG | 0.552039 | 4.2:-76657321 | MS.gene82161:CDS |
TCAACATTGTCATCTTCTCA+TGG | 0.552805 | 4.2:-76657951 | MS.gene82161:CDS |
AATTCGATCGAACCTTTCCA+AGG | 0.555850 | 4.2:+76657068 | None:intergenic |
GGTAGTGGTAGTAATGGTAA+TGG | 0.556024 | 4.2:-76657930 | MS.gene82161:CDS |
GCTTACCAATTGGTGAGAGC+TGG | 0.557459 | 4.2:+76657277 | None:intergenic |
AAGGTGAGTTCTAGTACTAC+CGG | 0.560768 | 4.2:-76657417 | MS.gene82161:CDS |
CCCTCATTGAAGCCTTGGAA+AGG | 0.561376 | 4.2:-76657080 | MS.gene82161:CDS |
ACTGCTGAGCTGATAGAAGC+TGG | 0.561856 | 4.2:-76657342 | MS.gene82161:CDS |
AAAGCAGCTAAGGCCGAAAG+TGG | 0.562649 | 4.2:-76656701 | MS.gene82161:CDS |
ATGTACTCCAAAAGATTGAA+AGG | 0.570089 | 4.2:-76656558 | MS.gene82161:CDS |
GTTCAAAGGGCACCTGTGAG+AGG | 0.570717 | 4.2:-76656388 | MS.gene82161:CDS |
AGAGCCACAGGGAAGCATGA+TGG | 0.571215 | 4.2:+76656733 | None:intergenic |
CATCATTTGAAAGATGAGCA+AGG | 0.573001 | 4.2:+76657871 | None:intergenic |
TCATGATGATGAGGAAACAA+TGG | 0.573020 | 4.2:+76657498 | None:intergenic |
TCTCATGGTAGTGGTAGTAA+TGG | 0.576556 | 4.2:-76657936 | MS.gene82161:CDS |
TCAATCTCGTTGCAAGAAGA+GGG | 0.578280 | 4.2:+76656934 | None:intergenic |
CGTGAATTTGCTGAATGTGA+AGG | 0.578961 | 4.2:+76656432 | None:intergenic |
ACCATCAACAAAATCATCCT+CGG | 0.579390 | 4.2:-76656520 | MS.gene82161:CDS |
TGAAGAAACATGTTCCTCCA+TGG | 0.581165 | 4.2:+76656469 | None:intergenic |
CAGCATAGCACAAGAAAGGA+AGG | 0.582661 | 4.2:+76656346 | None:intergenic |
TCAAAGAAATGACCCGGTAG+AGG | 0.583745 | 4.2:+76656808 | None:intergenic |
AGAACATGAACGACATTGGT+GGG | 0.584347 | 4.2:+76656634 | None:intergenic |
CTTGAATCAAGAACTGAAGT+GGG | 0.584678 | 4.2:+76658002 | None:intergenic |
TGGATCATCAACAACAACAA+TGG | 0.586807 | 4.2:-76657659 | MS.gene82161:CDS |
ACCTTTCCAAGGCTTCAATG+AGG | 0.587226 | 4.2:+76657079 | None:intergenic |
AACAAAATCTTGCAAAGTGG+TGG | 0.589673 | 4.2:-76657726 | MS.gene82161:CDS |
AAGAACATGAACGACATTGG+TGG | 0.589769 | 4.2:+76656633 | None:intergenic |
TGGGAAGAGGAACATCCATT+CGG | 0.591209 | 4.2:+76656653 | None:intergenic |
GTGAATTTGCTGAATGTGAA+GGG | 0.591860 | 4.2:+76656433 | None:intergenic |
TTCAAACGGTAACAATCTCA+CGG | 0.592949 | 4.2:-76657202 | MS.gene82161:CDS |
AACAGGAAAGTTCACACCAA+TGG | 0.593516 | 4.2:+76656774 | None:intergenic |
TTGAAGAACATGAACGACAT+TGG | 0.594485 | 4.2:+76656630 | None:intergenic |
AGCGTGACAAATTACCTCCA+TGG | 0.597025 | 4.2:-76656486 | MS.gene82161:CDS |
GAGATTGCACTAAGAAGTAA+CGG | 0.597858 | 4.2:-76656991 | MS.gene82161:CDS |
TAAAGAAGATTATTGCTATG+TGG | 0.612360 | 4.2:-76658027 | MS.gene82161:CDS |
ACAACAACAATGGTTGAACA+TGG | 0.613222 | 4.2:-76657649 | MS.gene82161:CDS |
TTGCCATCATGTCCTCTACC+GGG | 0.614713 | 4.2:-76656820 | MS.gene82161:CDS |
TGACCCGGTAGAGGACATGA+TGG | 0.615427 | 4.2:+76656817 | None:intergenic |
ATGGAGGTAATTTGTCACGC+TGG | 0.629161 | 4.2:+76656488 | None:intergenic |
AAGATGAAAATGGAGAACTA+GGG | 0.633076 | 4.2:+76657973 | None:intergenic |
ACAGCAGTAATCTTAAGTGA+AGG | 0.636223 | 4.2:+76656964 | None:intergenic |
GTAATCCGGTTCAAGCGCAA+GGG | 0.638818 | 4.2:-76657320 | MS.gene82161:CDS |
AAGCGCAAGGGATATTGGCG+CGG | 0.648472 | 4.2:-76657308 | MS.gene82161:CDS |
TGAACTCAAACGACATGTTG+AGG | 0.652289 | 4.2:+76656869 | None:intergenic |
ACCTGTGAGAGGATTTCAAG+TGG | 0.654432 | 4.2:-76656377 | MS.gene82161:CDS |
TGCTGCAGATCATGATGATG+AGG | 0.657062 | 4.2:+76657489 | None:intergenic |
ATGGACGCTTCGGTTCAACA+AGG | 0.660128 | 4.2:-76657630 | MS.gene82161:CDS |
ATATCGGGTTTGGAGTACAA+TGG | 0.666500 | 4.2:-76657029 | MS.gene82161:CDS |
TTACTATCAAAGAAATGACC+CGG | 0.669847 | 4.2:+76656802 | None:intergenic |
CACGCTGGTTGTGGTGACCG+AGG | 0.670125 | 4.2:+76656503 | None:intergenic |
TCTTGACCAGAATCCAAAAG+CGG | 0.685854 | 4.2:+76657561 | None:intergenic |
TGGACGCTTCGGTTCAACAA+GGG | 0.687015 | 4.2:-76657629 | MS.gene82161:CDS |
TTACCAACAACAGCAGTCGT+CGG | 0.697756 | 4.2:-76657463 | MS.gene82161:CDS |
AGAAACATGTTCCTCCATGG+AGG | 0.701239 | 4.2:+76656472 | None:intergenic |
TAATCCATCATGCTTCCCTG+TGG | 0.706732 | 4.2:-76656737 | MS.gene82161:CDS |
ATGAGAATGGATGATTGGGA+AGG | 0.712507 | 4.2:-76657810 | MS.gene82161:CDS |
TTGAACAAAATCTTGCAAAG+TGG | 0.719051 | 4.2:-76657729 | MS.gene82161:CDS |
GTGACAAATTACCTCCATGG+AGG | 0.762900 | 4.2:-76656483 | MS.gene82161:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTAGTTTCATTTTCAAAAT+TGG | - | chr4.2:76657299-76657318 | MS.gene82161:CDS | 15.0% |
!!! | ATTTTGAAAATGAAACTAAT+CGG | + | chr4.2:76657299-76657318 | None:intergenic | 15.0% |
!! | TTCAAATAACAATAGTTCAA+TGG | - | chr4.2:76656560-76656579 | MS.gene82161:CDS | 20.0% |
! | TAAAGAAGATTATTGCTATG+TGG | - | chr4.2:76656440-76656459 | MS.gene82161:CDS | 25.0% |
! | TGAAATTCCTCAAAAGTTAA+GGG | + | chr4.2:76656318-76656337 | None:intergenic | 25.0% |
! | TTGAAATTCCTCAAAAGTTA+AGG | + | chr4.2:76656319-76656338 | None:intergenic | 25.0% |
!!! | ATACTGACTCAAATTTTCTT+GGG | + | chr4.2:76657570-76657589 | None:intergenic | 25.0% |
!!! | ATGTTATTGATTTCGATATC+GGG | - | chr4.2:76657423-76657442 | MS.gene82161:CDS | 25.0% |
!!! | CATGTTATTGATTTCGATAT+CGG | - | chr4.2:76657422-76657441 | MS.gene82161:CDS | 25.0% |
!!! | TCACTTTTGAGGTTAATTAT+GGG | - | chr4.2:76656690-76656709 | MS.gene82161:CDS | 25.0% |
!!! | TCTCAAAATGTTGATTTTCA+TGG | - | chr4.2:76656771-76656790 | MS.gene82161:CDS | 25.0% |
!!! | TTCATTTTTTAAAGCAGCTA+AGG | - | chr4.2:76657756-76657775 | MS.gene82161:CDS | 25.0% |
AAGATGAAAATGGAGAACTA+GGG | + | chr4.2:76656497-76656516 | None:intergenic | 30.0% | |
AATAGTGAAGAAAAATGTGG+TGG | - | chr4.2:76656621-76656640 | MS.gene82161:CDS | 30.0% | |
ATCAACCTCAACAACAAAAT+TGG | - | chr4.2:76656409-76656428 | MS.gene82161:CDS | 30.0% | |
ATGTACTCCAAAAGATTGAA+AGG | - | chr4.2:76657909-76657928 | MS.gene82161:CDS | 30.0% | |
CAGTTAATGCTTCATTCAAA+CGG | - | chr4.2:76657251-76657270 | MS.gene82161:CDS | 30.0% | |
GACAATGTTGAAGATGAAAA+TGG | + | chr4.2:76656507-76656526 | None:intergenic | 30.0% | |
GAGAATAGTGAAGAAAAATG+TGG | - | chr4.2:76656618-76656637 | MS.gene82161:CDS | 30.0% | |
TTAAAAAATGAAGAGCCACA+GGG | + | chr4.2:76657748-76657767 | None:intergenic | 30.0% | |
TTACTATCAAAGAAATGACC+CGG | + | chr4.2:76657668-76657687 | None:intergenic | 30.0% | |
TTACTTATGAAACTGGAAAC+AGG | + | chr4.2:76657713-76657732 | None:intergenic | 30.0% | |
TTGAACAAAATCTTGCAAAG+TGG | - | chr4.2:76656738-76656757 | MS.gene82161:CDS | 30.0% | |
TTGTAATTCTCAGGAATGAA+TGG | + | chr4.2:76656879-76656898 | None:intergenic | 30.0% | |
TTTAAAAAATGAAGAGCCAC+AGG | + | chr4.2:76657749-76657768 | None:intergenic | 30.0% | |
! | AATTGGTAAGCCTTTTCAAA+GGG | - | chr4.2:76657202-76657221 | MS.gene82161:CDS | 30.0% |
! | ATTTTGTTCAATCCAGCATA+AGG | + | chr4.2:76656729-76656748 | None:intergenic | 30.0% |
! | TGAATGAAGCATTAACTGTA+AGG | + | chr4.2:76657249-76657268 | None:intergenic | 30.0% |
! | TGTAATGCCTTTCAATCTTT+TGG | + | chr4.2:76657919-76657938 | None:intergenic | 30.0% |
! | TTTGAGGAATTTCAAGTGAA+GGG | - | chr4.2:76656324-76656343 | MS.gene82161:CDS | 30.0% |
! | TTTGATAGTAATGAAGCCAT+TGG | - | chr4.2:76657677-76657696 | MS.gene82161:CDS | 30.0% |
! | TTTTGTTCAATCCAGCATAA+GGG | + | chr4.2:76656728-76656747 | None:intergenic | 30.0% |
!! | TGATGGATTACTTATGAAAC+TGG | + | chr4.2:76657720-76657739 | None:intergenic | 30.0% |
!! | TTTTGAGGAATTTCAAGTGA+AGG | - | chr4.2:76656323-76656342 | MS.gene82161:CDS | 30.0% |
!!! | AATGACCAATTTTGTTGTTG+AGG | + | chr4.2:76656417-76656436 | None:intergenic | 30.0% |
!!! | CAAAATGTTGATTTTCATGG+TGG | - | chr4.2:76656774-76656793 | MS.gene82161:CDS | 30.0% |
!!! | CATACTGACTCAAATTTTCT+TGG | + | chr4.2:76657571-76657590 | None:intergenic | 30.0% |
!!! | GTCACTTTTGAGGTTAATTA+TGG | - | chr4.2:76656689-76656708 | MS.gene82161:CDS | 30.0% |
AACAAAATCTTGCAAAGTGG+TGG | - | chr4.2:76656741-76656760 | MS.gene82161:CDS | 35.0% | |
AACTCATCTCAGTTTCAACT+TGG | - | chr4.2:76658155-76658174 | MS.gene82161:CDS | 35.0% | |
ACAACAACAATGGTTGAACA+TGG | - | chr4.2:76656818-76656837 | MS.gene82161:CDS | 35.0% | |
ACAGCAGTAATCTTAAGTGA+AGG | + | chr4.2:76657506-76657525 | None:intergenic | 35.0% | |
ACCATCAACAAAATCATCCT+CGG | - | chr4.2:76657947-76657966 | MS.gene82161:CDS | 35.0% | |
CATCATTTGAAAGATGAGCA+AGG | + | chr4.2:76656599-76656618 | None:intergenic | 35.0% | |
CTTCACATTCAGCAAATTCA+CGG | - | chr4.2:76658036-76658055 | MS.gene82161:CDS | 35.0% | |
CTTGAATCAAGAACTGAAGT+GGG | + | chr4.2:76656468-76656487 | None:intergenic | 35.0% | |
GAAGATGAAAATGGAGAACT+AGG | + | chr4.2:76656498-76656517 | None:intergenic | 35.0% | |
GAGATTGCACTAAGAAGTAA+CGG | - | chr4.2:76657476-76657495 | MS.gene82161:CDS | 35.0% | |
GGCTTGATTACAAGTAAAGT+TGG | + | chr4.2:76657369-76657388 | None:intergenic | 35.0% | |
GGTAACACATTGTAATTCTC+AGG | + | chr4.2:76656888-76656907 | None:intergenic | 35.0% | |
TCAACATTGTCATCTTCTCA+TGG | - | chr4.2:76656516-76656535 | MS.gene82161:CDS | 35.0% | |
TCTTGAATCAAGAACTGAAG+TGG | + | chr4.2:76656469-76656488 | None:intergenic | 35.0% | |
TGGATCATCAACAACAACAA+TGG | - | chr4.2:76656808-76656827 | MS.gene82161:CDS | 35.0% | |
TGGTATGAGAATGGATGATT+GGG | - | chr4.2:76656653-76656672 | MS.gene82161:CDS | 35.0% | |
TTCAAACGGTAACAATCTCA+CGG | - | chr4.2:76657265-76657284 | MS.gene82161:CDS | 35.0% | |
TTGAAGAACATGAACGACAT+TGG | + | chr4.2:76657840-76657859 | None:intergenic | 35.0% | |
! | ATTGATTTCGATATCGGGTT+TGG | - | chr4.2:76657428-76657447 | MS.gene82161:CDS | 35.0% |
! | ATTTCAAGTGAAGGGAATGT+TGG | - | chr4.2:76656332-76656351 | MS.gene82161:CDS | 35.0% |
! | CAATTGGTAAGCCTTTTCAA+AGG | - | chr4.2:76657201-76657220 | MS.gene82161:CDS | 35.0% |
! | CTTTGAAAAGGCTTACCAAT+TGG | + | chr4.2:76657203-76657222 | None:intergenic | 35.0% |
! | TAGAAAGAAGCCCTTTGAAA+AGG | + | chr4.2:76657215-76657234 | None:intergenic | 35.0% |
! | TCATGATGATGAGGAAACAA+TGG | + | chr4.2:76656972-76656991 | None:intergenic | 35.0% |
! | TTACAATGTGTTACCGCTTT+TGG | - | chr4.2:76656893-76656912 | MS.gene82161:CDS | 35.0% |
!! | GTGAATTTGCTGAATGTGAA+GGG | + | chr4.2:76658037-76658056 | None:intergenic | 35.0% |
!! | GTTGATTTTCATGGTGGTTT+TGG | - | chr4.2:76656780-76656799 | MS.gene82161:CDS | 35.0% |
!!! | AGGATGATTTTGTTGATGGT+TGG | + | chr4.2:76657947-76657966 | None:intergenic | 35.0% |
!!! | TGATTTTGTTGATGGTTGGT+TGG | + | chr4.2:76657943-76657962 | None:intergenic | 35.0% |
AACAGGAAAGTTCACACCAA+TGG | + | chr4.2:76657696-76657715 | None:intergenic | 40.0% | |
AAGAACATGAACGACATTGG+TGG | + | chr4.2:76657837-76657856 | None:intergenic | 40.0% | |
AAGTTGGCAAACTGAAGAAC+AGG | + | chr4.2:76657353-76657372 | None:intergenic | 40.0% | |
AATTCGATCGAACCTTTCCA+AGG | + | chr4.2:76657402-76657421 | None:intergenic | 40.0% | |
AGAACATGAACGACATTGGT+GGG | + | chr4.2:76657836-76657855 | None:intergenic | 40.0% | |
AGGAACATGTTTCTTCAGTC+TGG | - | chr4.2:76658004-76658023 | MS.gene82161:CDS | 40.0% | |
AGTGAAGAAAAATGTGGTGG+TGG | - | chr4.2:76656624-76656643 | MS.gene82161:CDS | 40.0% | |
ATGAGAATGGATGATTGGGA+AGG | - | chr4.2:76656657-76656676 | MS.gene82161:CDS | 40.0% | |
CAAATATACTCTGCTGAAGC+TGG | + | chr4.2:76657091-76657110 | None:intergenic | 40.0% | |
CTGAAGAACAGGTGATATCT+CGG | + | chr4.2:76657342-76657361 | None:intergenic | 40.0% | |
GTGGTATGAGAATGGATGAT+TGG | - | chr4.2:76656652-76656671 | MS.gene82161:CDS | 40.0% | |
TCAATCTCGTTGCAAGAAGA+GGG | + | chr4.2:76657536-76657555 | None:intergenic | 40.0% | |
TCCAAAGTTACGACCACTTT+CGG | + | chr4.2:76657782-76657801 | None:intergenic | 40.0% | |
TCTTGACCAGAATCCAAAAG+CGG | + | chr4.2:76656909-76656928 | None:intergenic | 40.0% | |
TGAACTCAAACGACATGTTG+AGG | + | chr4.2:76657601-76657620 | None:intergenic | 40.0% | |
TGAAGAAACATGTTCCTCCA+TGG | + | chr4.2:76658001-76658020 | None:intergenic | 40.0% | |
TTGTCATCTTCTCATGGTAG+TGG | - | chr4.2:76656522-76656541 | MS.gene82161:CDS | 40.0% | |
! | AAGCTGAGTGTTTGGTTCAA+AGG | - | chr4.2:76658065-76658084 | MS.gene82161:CDS | 40.0% |
! | AAGGTGAGTTCTAGTACTAC+CGG | - | chr4.2:76657050-76657069 | MS.gene82161:CDS | 40.0% |
! | ACCGAGGATGATTTTGTTGA+TGG | + | chr4.2:76657951-76657970 | None:intergenic | 40.0% |
! | AGCTGAGTGTTTGGTTCAAA+GGG | - | chr4.2:76658066-76658085 | MS.gene82161:CDS | 40.0% |
! | ATATCGGGTTTGGAGTACAA+TGG | - | chr4.2:76657438-76657457 | MS.gene82161:CDS | 40.0% |
! | GGTAGTGGTAGTAATGGTAA+TGG | - | chr4.2:76656537-76656556 | MS.gene82161:CDS | 40.0% |
!! | CGTGAATTTGCTGAATGTGA+AGG | + | chr4.2:76658038-76658057 | None:intergenic | 40.0% |
!! | TCTCATGGTAGTGGTAGTAA+TGG | - | chr4.2:76656531-76656550 | MS.gene82161:CDS | 40.0% |
!!! | CAATCTTTTGGAGTACATCG+AGG | + | chr4.2:76657907-76657926 | None:intergenic | 40.0% |
!!! | GTCAAGATCAGTCACTTTTG+AGG | - | chr4.2:76656679-76656698 | MS.gene82161:CDS | 40.0% |
!!! | TCATGGTGGTTTTGGAGTTT+TGG | - | chr4.2:76656788-76656807 | MS.gene82161:CDS | 40.0% |
AATATCCCTTGCGCTTGAAC+CGG | + | chr4.2:76657155-76657174 | None:intergenic | 45.0% | |
AATCACCAGCTCTCACCAAT+TGG | - | chr4.2:76657185-76657204 | MS.gene82161:CDS | 45.0% | |
ACCTGTGAGAGGATTTCAAG+TGG | - | chr4.2:76658090-76658109 | MS.gene82161:CDS | 45.0% | |
ACCTTTCCAAGGCTTCAATG+AGG | + | chr4.2:76657391-76657410 | None:intergenic | 45.0% | |
AGAAACATGTTCCTCCATGG+AGG | + | chr4.2:76657998-76658017 | None:intergenic | 45.0% | |
AGCGTGACAAATTACCTCCA+TGG | - | chr4.2:76657981-76658000 | MS.gene82161:CDS | 45.0% | |
ATCTTGCAAAGTGGTGGTTG+TGG | - | chr4.2:76656747-76656766 | MS.gene82161:CDS | 45.0% | |
ATGGTTGAACATGGACGCTT+CGG | - | chr4.2:76656827-76656846 | MS.gene82161:CDS | 45.0% | |
CAGCATAGCACAAGAAAGGA+AGG | + | chr4.2:76658124-76658143 | None:intergenic | 45.0% | |
CCTTTCCAAGGCTTCAATGA+GGG | + | chr4.2:76657390-76657409 | None:intergenic | 45.0% | |
CTCAATCTCGTTGCAAGAAG+AGG | + | chr4.2:76657537-76657556 | None:intergenic | 45.0% | |
CTTCCTTTCTTGTGCTATGC+TGG | - | chr4.2:76658122-76658141 | MS.gene82161:CDS | 45.0% | |
GATGTTGAAGACCCTTATGC+TGG | - | chr4.2:76656714-76656733 | MS.gene82161:CDS | 45.0% | |
GCTGATAGAAGCTGGTAATC+CGG | - | chr4.2:76657133-76657152 | MS.gene82161:CDS | 45.0% | |
GTGACAAATTACCTCCATGG+AGG | - | chr4.2:76657984-76658003 | MS.gene82161:CDS | 45.0% | |
TAATCCATCATGCTTCCCTG+TGG | - | chr4.2:76657730-76657749 | MS.gene82161:CDS | 45.0% | |
TCAAAGAAATGACCCGGTAG+AGG | + | chr4.2:76657662-76657681 | None:intergenic | 45.0% | |
TCCAATTGCGAAGCAGCAAA+AGG | - | chr4.2:76657031-76657050 | MS.gene82161:CDS | 45.0% | |
TCCACTTGAAATCCTCTCAC+AGG | + | chr4.2:76658094-76658113 | None:intergenic | 45.0% | |
TGGGAAGAGGAACATCCATT+CGG | + | chr4.2:76657817-76657836 | None:intergenic | 45.0% | |
TTACCAACAACAGCAGTCGT+CGG | - | chr4.2:76657004-76657023 | MS.gene82161:CDS | 45.0% | |
! | ATGGAGGTAATTTGTCACGC+TGG | + | chr4.2:76657982-76658001 | None:intergenic | 45.0% |
! | GGCTTTGCCCTTAACTTTTG+AGG | - | chr4.2:76656308-76656327 | MS.gene82161:CDS | 45.0% |
! | GTAATTTGTCACGCTGGTTG+TGG | + | chr4.2:76657976-76657995 | None:intergenic | 45.0% |
! | TGCTGCAGATCATGATGATG+AGG | + | chr4.2:76656981-76657000 | None:intergenic | 45.0% |
!! | ACCTTTTGCTGCTTCGCAAT+TGG | + | chr4.2:76657035-76657054 | None:intergenic | 45.0% |
!! | CTGGTCAAGAAGTGTTTGCT+AGG | - | chr4.2:76656919-76656938 | MS.gene82161:CDS | 45.0% |
!! | GAAGAAAAATGTGGTGGTGG+TGG | - | chr4.2:76656627-76656646 | MS.gene82161:CDS | 45.0% |
!! | GTGTTACCGCTTTTGGATTC+TGG | - | chr4.2:76656900-76656919 | MS.gene82161:CDS | 45.0% |
AAAGCAGCTAAGGCCGAAAG+TGG | - | chr4.2:76657766-76657785 | MS.gene82161:CDS | 50.0% | |
ACTGCTGAGCTGATAGAAGC+TGG | - | chr4.2:76657125-76657144 | MS.gene82161:CDS | 50.0% | |
ATGGACGCTTCGGTTCAACA+AGG | - | chr4.2:76656837-76656856 | MS.gene82161:CDS | 50.0% | |
CCCTCATTGAAGCCTTGGAA+AGG | - | chr4.2:76657387-76657406 | MS.gene82161:CDS | 50.0% | |
CTGCCAGCATAGCACAAGAA+AGG | + | chr4.2:76658128-76658147 | None:intergenic | 50.0% | |
CTGGATGCTTGCATCATCTC+CGG | + | chr4.2:76657072-76657091 | None:intergenic | 50.0% | |
CTTGCCATCATGTCCTCTAC+CGG | - | chr4.2:76657646-76657665 | MS.gene82161:CDS | 50.0% | |
GCCGAAAGTGGTCGTAACTT+TGG | - | chr4.2:76657778-76657797 | MS.gene82161:CDS | 50.0% | |
GCTTACCAATTGGTGAGAGC+TGG | + | chr4.2:76657193-76657212 | None:intergenic | 50.0% | |
GGAAGCTCAAGCTGAGTGTT+TGG | - | chr4.2:76658057-76658076 | MS.gene82161:CDS | 50.0% | |
GGACAAAAACTGCGACCGAA+TGG | - | chr4.2:76657799-76657818 | MS.gene82161:CDS | 50.0% | |
GGTTCAAGCGCAAGGGATAT+TGG | - | chr4.2:76657154-76657173 | MS.gene82161:CDS | 50.0% | |
GTAATCCGGTTCAAGCGCAA+GGG | - | chr4.2:76657147-76657166 | MS.gene82161:CDS | 50.0% | |
TCAAGCCCTCATTGAAGCCT+TGG | - | chr4.2:76657382-76657401 | MS.gene82161:CDS | 50.0% | |
TGAACGACATTGGTGGGAAG+AGG | + | chr4.2:76657830-76657849 | None:intergenic | 50.0% | |
TGGACGCTTCGGTTCAACAA+GGG | - | chr4.2:76656838-76656857 | MS.gene82161:CDS | 50.0% | |
TTCTTGTGCTATGCTGGCAG+AGG | - | chr4.2:76658128-76658147 | MS.gene82161:CDS | 50.0% | |
TTGCCATCATGTCCTCTACC+GGG | - | chr4.2:76657647-76657666 | MS.gene82161:CDS | 50.0% | |
!! | GAAAAATGTGGTGGTGGTGG+TGG | - | chr4.2:76656630-76656649 | MS.gene82161:CDS | 50.0% |
!! | TGGTGGTGGTGGTATGAGAA+TGG | - | chr4.2:76656644-76656663 | MS.gene82161:CDS | 50.0% |
AAGCGCAAGGGATATTGGCG+CGG | - | chr4.2:76657159-76657178 | MS.gene82161:CDS | 55.0% | |
CAACCGACGACTGCTGTTGT+TGG | + | chr4.2:76657010-76657029 | None:intergenic | 55.0% | |
GGTAATCCGGTTCAAGCGCA+AGG | - | chr4.2:76657146-76657165 | MS.gene82161:CDS | 55.0% | |
TGACCCGGTAGAGGACATGA+TGG | + | chr4.2:76657653-76657672 | None:intergenic | 55.0% | |
TGCTAGGAGACATCAGCAGC+AGG | - | chr4.2:76656935-76656954 | MS.gene82161:CDS | 55.0% | |
! | AGAGCCACAGGGAAGCATGA+TGG | + | chr4.2:76657737-76657756 | None:intergenic | 55.0% |
!! | AAATGTGGTGGTGGTGGTGG+TGG | - | chr4.2:76656633-76656652 | MS.gene82161:CDS | 55.0% |
!! | GTTCAAAGGGCACCTGTGAG+AGG | - | chr4.2:76658079-76658098 | MS.gene82161:CDS | 55.0% |
! | CACGCTGGTTGTGGTGACCG+AGG | + | chr4.2:76657967-76657986 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 76656303 | 76658186 | 76656303 | ID=MS.gene82161 |
chr4.2 | mRNA | 76656303 | 76658186 | 76656303 | ID=MS.gene82161.t1;Parent=MS.gene82161 |
chr4.2 | exon | 76656303 | 76658186 | 76656303 | ID=MS.gene82161.t1.exon1;Parent=MS.gene82161.t1 |
chr4.2 | CDS | 76656303 | 76658186 | 76656303 | ID=cds.MS.gene82161.t1;Parent=MS.gene82161.t1 |
Gene Sequence |
Protein sequence |