AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene010745

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene010745.t1 MTR_0092s0100 95.794 737 20 3 1 734 1 729 0.0 1434
MS.gene010745.t1 MTR_0092s0100 95.794 737 20 3 1 734 4 732 0.0 1434
MS.gene010745.t1 MTR_4g026485 54.529 541 183 14 209 734 133 625 5.27e-178 523
MS.gene010745.t1 MTR_0092s0060 95.187 187 7 1 1 187 1 185 1.34e-121 362
MS.gene010745.t1 MTR_8g077940 36.216 370 219 11 375 734 180 542 2.98e-60 213
MS.gene010745.t1 MTR_7g027190 27.169 438 267 11 322 734 264 674 1.68e-36 146
MS.gene010745.t1 MTR_3g065980 28.684 380 243 7 374 733 169 540 2.26e-36 144
MS.gene010745.t1 MTR_3g056110 26.790 377 249 9 376 733 174 542 1.15e-32 133
MS.gene010745.t1 MTR_5g058860 29.949 394 232 15 374 734 116 498 5.85e-30 125
MS.gene010745.t1 MTR_4g076020 28.649 370 221 13 380 733 87 429 8.00e-30 123
MS.gene010745.t1 MTR_5g094450 25.469 373 259 7 378 733 162 532 2.88e-29 123
MS.gene010745.t1 MTR_4g077760 30.133 375 238 12 374 733 190 555 3.94e-29 123
MS.gene010745.t1 MTR_3g072710 27.681 401 234 16 374 734 117 501 1.96e-28 120
MS.gene010745.t1 MTR_3g089055 27.957 372 247 9 378 733 199 565 2.56e-28 120
MS.gene010745.t1 MTR_3g089055 27.957 372 247 9 378 733 204 570 2.68e-28 120
MS.gene010745.t1 MTR_5g097480 23.662 355 254 7 393 733 193 544 1.37e-26 115
MS.gene010745.t1 MTR_2g082090 25.714 385 268 8 363 732 197 578 2.51e-26 114
MS.gene010745.t1 MTR_1g029420 27.128 376 245 12 378 733 226 592 6.92e-26 113
MS.gene010745.t1 MTR_8g093070 26.810 373 252 9 371 732 133 495 7.10e-26 112
MS.gene010745.t1 MTR_7g074650 26.359 368 241 9 380 733 441 792 1.51e-25 113
MS.gene010745.t1 MTR_4g133660 24.409 381 252 9 378 734 176 544 5.11e-25 110
MS.gene010745.t1 MTR_2g026250 25.066 379 256 10 376 734 227 597 1.17e-24 109
MS.gene010745.t1 MTR_4g104020 25.773 388 249 12 374 734 146 521 1.01e-23 106
MS.gene010745.t1 MTR_4g102790 24.074 378 263 7 374 732 289 661 1.04e-23 107
MS.gene010745.t1 MTR_5g019750 30.303 231 148 6 511 734 71 295 2.61e-23 101
MS.gene010745.t1 MTR_1g069725 28.533 375 238 15 374 734 106 464 1.56e-22 102
MS.gene010745.t1 MTR_8g442410 23.316 386 258 10 374 733 152 525 1.42e-19 93.6
MS.gene010745.t1 MTR_2g097473 23.358 411 278 11 350 732 252 653 2.21e-19 93.2
MS.gene010745.t1 MTR_2g034250 24.672 381 266 8 373 733 206 585 3.42e-19 92.4
MS.gene010745.t1 MTR_4g097080 22.251 391 273 12 364 733 123 503 3.79e-19 92.0
MS.gene010745.t1 MTR_2g034280 23.969 388 270 10 363 733 196 575 3.92e-19 92.0
MS.gene010745.t1 MTR_1g096030 26.276 392 246 14 374 732 77 458 5.08e-19 91.3
MS.gene010745.t1 MTR_2g034260 24.675 385 260 11 373 733 206 584 5.43e-19 91.7
MS.gene010745.t1 MTR_7g109580 25.201 373 254 12 378 733 190 554 2.68e-18 89.4
MS.gene010745.t1 MTR_4g064200 23.989 371 260 8 378 732 285 649 1.79e-17 87.0
MS.gene010745.t1 MTR_2g097467 23.114 411 279 11 350 732 252 653 2.47e-17 86.7
MS.gene010745.t1 MTR_2g097410 23.097 381 255 9 378 732 372 740 3.34e-17 86.7
MS.gene010745.t1 MTR_2g097390 24.933 373 254 11 378 732 276 640 3.88e-17 86.3
MS.gene010745.t1 MTR_2g097310 23.822 382 247 9 378 732 273 637 7.73e-17 85.1
MS.gene010745.t1 MTR_2g097463 22.520 373 262 8 378 732 291 654 7.83e-17 85.1
MS.gene010745.t1 MTR_7g062120 22.222 378 262 6 378 733 373 740 9.08e-17 85.1
MS.gene010745.t1 MTR_4g064160 22.705 414 278 11 348 732 283 683 1.15e-16 84.7
MS.gene010745.t1 MTR_2g099110 20.788 457 293 11 323 733 18 451 2.53e-16 82.8
MS.gene010745.t1 MTR_2g097380 23.546 361 231 9 385 732 232 560 1.08e-15 81.3
MS.gene010745.t1 MTR_2g089100 23.775 408 240 15 378 732 53 442 2.47e-15 79.7
MS.gene010745.t1 MTR_4g064180 22.703 370 264 9 378 728 255 621 2.59e-15 80.1
MS.gene010745.t1 MTR_4g076140 34.118 170 104 2 354 515 19 188 1.09e-14 77.8
MS.gene010745.t1 MTR_4g064150 22.043 372 272 6 378 732 362 732 1.11e-14 78.6
MS.gene010745.t1 MTR_4g064120 21.680 369 269 7 378 728 255 621 1.71e-14 77.8
MS.gene010745.t1 MTR_2g097350 24.403 377 251 14 378 732 275 639 4.82e-14 76.3
MS.gene010745.t1 MTR_1g086970 23.934 422 279 17 342 733 69 478 7.58e-14 75.1
MS.gene010745.t1 MTR_5g009080 28.205 195 134 2 354 546 33 223 1.91e-13 73.9
MS.gene010745.t1 MTR_5g015490 21.465 396 251 11 378 733 115 490 3.65e-13 72.8
MS.gene010745.t1 MTR_3g022830 31.724 145 89 2 378 516 26 166 2.15e-12 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene010745.t1 AT4G00150 57.179 397 139 11 341 734 187 555 5.30e-139 420
MS.gene010745.t1 AT2G45160 48.283 466 200 16 292 734 193 640 3.39e-121 377
MS.gene010745.t1 AT3G60630 44.773 507 200 16 271 734 154 623 6.41e-113 355
MS.gene010745.t1 AT4G36710 33.600 375 221 13 375 733 123 485 2.25e-55 197
MS.gene010745.t1 AT2G01570 30.108 372 237 9 374 733 221 581 2.12e-34 139
MS.gene010745.t1 AT5G17490 29.521 376 233 13 374 733 157 516 8.95e-32 130
MS.gene010745.t1 AT5G66770 27.750 400 252 13 356 733 200 584 1.41e-31 130
MS.gene010745.t1 AT3G03450 27.851 377 244 10 374 733 180 545 1.61e-31 130
MS.gene010745.t1 AT2G04890 26.005 373 246 8 378 733 54 413 2.56e-30 124
MS.gene010745.t1 AT1G14920 27.056 377 242 9 374 733 169 529 1.24e-29 124
MS.gene010745.t1 AT3G50650 29.508 366 231 10 387 733 185 542 2.29e-29 124
MS.gene010745.t1 AT5G41920 25.886 367 259 7 374 733 40 400 3.88e-29 120
MS.gene010745.t1 AT3G54220 27.348 362 246 8 380 732 296 649 8.88e-29 122
MS.gene010745.t1 AT1G66350 26.415 371 248 10 374 734 152 507 1.88e-28 120
MS.gene010745.t1 AT5G48150 24.462 372 261 8 378 733 123 490 2.68e-28 119
MS.gene010745.t1 AT5G48150 24.462 372 261 8 378 733 123 490 2.68e-28 119
MS.gene010745.t1 AT5G48150 24.462 372 261 8 378 733 123 490 2.68e-28 119
MS.gene010745.t1 AT5G48150 24.462 372 261 8 378 733 123 490 2.68e-28 119
MS.gene010745.t1 AT4G08250 28.846 416 260 16 347 732 67 476 1.10e-27 117
MS.gene010745.t1 AT1G50600 24.194 372 261 7 378 733 160 526 1.38e-27 118
MS.gene010745.t1 AT1G50600 24.194 372 261 7 378 733 231 597 4.04e-27 117
MS.gene010745.t1 AT1G50600 24.194 372 261 7 378 733 235 601 5.11e-27 117
MS.gene010745.t1 AT1G21450 25.061 411 270 11 351 733 193 593 5.55e-27 117
MS.gene010745.t1 AT4G17230 26.178 382 241 8 378 733 159 525 2.44e-26 114
MS.gene010745.t1 AT4G17230 26.178 382 241 8 378 733 159 525 2.44e-26 114
MS.gene010745.t1 AT5G59450 23.810 420 279 11 344 733 190 598 1.69e-23 106
MS.gene010745.t1 AT1G55580 24.771 327 220 6 423 733 129 445 1.23e-19 92.8
MS.gene010745.t1 AT1G63100 24.747 396 245 14 374 732 274 653 1.55e-19 94.0
MS.gene010745.t1 AT1G63100 24.747 396 245 14 374 732 249 628 1.74e-19 93.6
MS.gene010745.t1 AT1G07520 21.600 375 265 9 382 732 323 692 6.97e-19 92.0
MS.gene010745.t1 AT1G07520 21.600 375 265 9 382 732 324 693 7.04e-19 92.0
MS.gene010745.t1 AT1G07520 21.390 374 267 8 382 732 159 528 9.87e-19 90.9
MS.gene010745.t1 AT1G07520 21.390 374 267 8 382 732 159 528 9.87e-19 90.9
MS.gene010745.t1 AT3G46600 22.762 391 274 9 366 733 194 579 1.80e-17 87.0
MS.gene010745.t1 AT3G46600 22.762 391 274 9 366 733 162 547 6.00e-17 85.1
MS.gene010745.t1 AT3G46600 22.849 372 266 8 378 733 5 371 1.07e-16 83.2
MS.gene010745.t1 AT1G07530 23.342 377 258 9 378 732 397 764 1.47e-16 84.7
MS.gene010745.t1 AT4G37650 22.335 394 257 10 378 733 147 529 2.19e-15 80.1
MS.gene010745.t1 AT1G50420 29.897 194 116 5 374 556 54 238 3.19e-15 79.3
MS.gene010745.t1 AT5G52510 23.274 391 246 12 378 733 269 640 3.06e-13 73.6
MS.gene010745.t1 AT2G29065 21.485 377 272 7 378 732 253 627 3.62e-13 73.6

Find 150 sgRNAs with CRISPR-Local

Find 186 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTGTGAAGAACTGAAATT+AGG 0.187840 7.4:+59373655 None:intergenic
GGAAAAGGTGTGTTAGATTT+TGG 0.194202 7.4:-59374294 MS.gene010745:CDS
GGCAATTGAGAAGCTTGTTT+TGG 0.238119 7.4:-59372366 MS.gene010745:CDS
AAGTTACCATTTGAAGAAAT+AGG 0.249425 7.4:+59373784 None:intergenic
AGTCTCTGAATTCTGTTTCA+TGG 0.261651 7.4:-59372673 MS.gene010745:CDS
ATTTGTTCTGATTTCCCTTT+TGG 0.265105 7.4:-59373706 MS.gene010745:CDS
TCTTCGCCGCCACCGCTTCC+AGG 0.266115 7.4:+59373262 None:intergenic
TTCCATTATCAATTTCAATA+TGG 0.276508 7.4:+59373933 None:intergenic
AATTCCGAAGATACCCTTCT+TGG 0.278051 7.4:-59373413 MS.gene010745:CDS
TTCCATATTGAAATTGATAA+TGG 0.285700 7.4:-59373935 MS.gene010745:CDS
GCTTCCCCATAGGAGAAATT+TGG 0.291304 7.4:+59373125 None:intergenic
GCATAAACTGAGCTTGGTTT+TGG 0.318676 7.4:+59373542 None:intergenic
GTAGGAGTGGTTTGTTGATT+TGG 0.323080 7.4:+59374138 None:intergenic
AGATATTGAAGATGCATCTA+TGG 0.323147 7.4:-59373911 MS.gene010745:CDS
AATGGCGCATAAGCAGAAAA+TGG 0.330464 7.4:-59373290 MS.gene010745:CDS
GTTTATGCCTAACCCTAGTT+TGG 0.334769 7.4:-59373527 MS.gene010745:CDS
GAAGATACCCTTCTTGGATT+CGG 0.340738 7.4:-59373407 MS.gene010745:CDS
GGAACACGCGCAAGGGATAT+TGG 0.347128 7.4:-59373161 MS.gene010745:CDS
CAACAAGATGTTGAATTCAA+TGG 0.350188 7.4:-59373844 MS.gene010745:CDS
CTTGTGAAGAACTGAAATTA+GGG 0.351845 7.4:+59373656 None:intergenic
AAAACAAGCTTCTCAATTGC+CGG 0.355848 7.4:+59372368 None:intergenic
AAGATACCCTTCTTGGATTC+GGG 0.361865 7.4:-59373406 MS.gene010745:CDS
TGTTTGGTGCAGAGGATTCC+TGG 0.364499 7.4:-59372239 MS.gene010745:CDS
TTTGCACTCCAGTCTTATTC+CGG 0.364854 7.4:-59372470 MS.gene010745:CDS
AGTTACCATTTGAAGAAATA+GGG 0.368741 7.4:+59373785 None:intergenic
CGGGTCAAGAGATGTTTCTT+AGG 0.388186 7.4:-59373387 MS.gene010745:CDS
ATCGGTAGAAGCGCCGCCTC+CGG 0.394887 7.4:+59374080 None:intergenic
CAATCACCAAATTTCTCCTA+TGG 0.395643 7.4:-59373131 MS.gene010745:CDS
ACTTATAGACGCCGGTAATC+CGG 0.404547 7.4:-59373182 MS.gene010745:CDS
CTTGACCCTATTTCTTCAAA+TGG 0.407880 7.4:-59373790 MS.gene010745:CDS
AATATCCCTTGCGCGTGTTC+CGG 0.413029 7.4:+59373163 None:intergenic
TTTCCTATGTATTCTTCAAA+AGG 0.413997 7.4:+59374312 None:intergenic
AAATTTGCAAACTGCAGAAC+AGG 0.415407 7.4:+59372959 None:intergenic
TATGTATTCTTCAAAAGGTA+AGG 0.415901 7.4:+59374317 None:intergenic
GGGAACCCTGGAAGCGGTGG+CGG 0.418143 7.4:-59373268 MS.gene010745:CDS
AAGATGTGGAATGGAGGATT+GGG 0.422443 7.4:-59373998 MS.gene010745:CDS
TTGCGCGTGTTCCGGATTAC+CGG 0.426339 7.4:+59373171 None:intergenic
ATGGCGCATAAGCAGAAAAT+GGG 0.428884 7.4:-59373289 MS.gene010745:CDS
AGAGTCGCAGGCAGAGTGTT+TGG 0.429838 7.4:-59372255 MS.gene010745:CDS
CCACAGCTTCAAGCAATGCT+TGG 0.439953 7.4:+59372927 None:intergenic
TAATTTGAGAAAGAGCAAAT+AGG 0.442683 7.4:+59372608 None:intergenic
AGCTTGTGGTATGTTTCTGT+TGG 0.443296 7.4:+59374029 None:intergenic
ACTAGCCTCTTGCTCAAGAT+TGG 0.445518 7.4:-59373010 MS.gene010745:CDS
TCGATCATCTGAAGTACATC+CGG 0.446716 7.4:+59372407 None:intergenic
ATCTCATCTCGGTTTCAACT+TGG 0.447156 7.4:-59372157 MS.gene010745:CDS
GTGGCTGAAGCTGAATCTCT+TGG 0.455539 7.4:+59373470 None:intergenic
AAAGATGTGGAATGGAGGAT+TGG 0.456441 7.4:-59373999 MS.gene010745:CDS
TTTGAAGAATACATAGGAAA+AGG 0.459740 7.4:-59374309 MS.gene010745:CDS
TTCATCCCTCTACTACCAAA+AGG 0.463150 7.4:+59373691 None:intergenic
TCACAAGTTTCACTTTCTCA+TGG 0.465348 7.4:-59373640 MS.gene010745:CDS
TTTGGGCCGTTTGGGTTCGC+AGG 0.468143 7.4:-59372348 MS.gene010745:CDS
GGTGCAGAGGATTCCTGGTA+GGG 0.470286 7.4:-59372234 MS.gene010745:CDS
ATCAAGTGATTCAAGCAAAC+CGG 0.470386 7.4:+59372451 None:intergenic
TCGCAATCGCGTAGTGGCTG+CGG 0.474481 7.4:+59372650 None:intergenic
GGTTAGGCATAAACTGAGCT+TGG 0.478491 7.4:+59373536 None:intergenic
TTCTATCCTGCGAACCCAAA+CGG 0.480883 7.4:+59372342 None:intergenic
CTCAATTTCATCGTGGTGTG+AGG 0.481171 7.4:+59372775 None:intergenic
AGGGAAAATTGTTGCTATGC+GGG 0.481377 7.4:-59374201 MS.gene010745:CDS
CCATTGGCCTCTGCTGCAGA+TGG 0.483207 7.4:+59373308 None:intergenic
CGCAGGATAGAACACTTCCT+TGG 0.483347 7.4:-59372331 MS.gene010745:CDS
GCCTAAAATTGTCGTAACAT+TGG 0.487648 7.4:-59372540 MS.gene010745:CDS
AGCTTCAAGCAATGCTTGGT+TGG 0.488113 7.4:+59372931 None:intergenic
CGCTTGTCTTGTGTTGGCAA+AGG 0.491242 7.4:-59372184 MS.gene010745:CDS
AGAATTCGCTTGTCTTGTGT+TGG 0.495542 7.4:-59372190 MS.gene010745:CDS
TGGTGCAGAGGATTCCTGGT+AGG 0.496504 7.4:-59372235 MS.gene010745:CDS
ACGCGATTGCGAAGCAGTTG+TGG 0.497464 7.4:-59372639 MS.gene010745:CDS
TCACACGGTAGCGCCGGAGG+CGG 0.497760 7.4:-59374093 MS.gene010745:CDS
CTTTGCGCCGGTGGTGCTAT+CGG 0.499180 7.4:+59374062 None:intergenic
ATCTTGAGCAAGAGGCTAGT+TGG 0.505941 7.4:+59373013 None:intergenic
AATCACCAAATTTCTCCTAT+GGG 0.509811 7.4:-59373130 MS.gene010745:CDS
GAATCCAAGAAGGGTATCTT+CGG 0.510787 7.4:+59373409 None:intergenic
CCATCTGCAGCAGAGGCCAA+TGG 0.514076 7.4:-59373308 MS.gene010745:CDS
CGAGAAATACTATCTGCAAC+CGG 0.516860 7.4:-59372387 MS.gene010745:CDS
ACAATGGTCTTCATTTATGC+AGG 0.517675 7.4:-59372855 MS.gene010745:CDS
GTGCAGAGGATTCCTGGTAG+GGG 0.518621 7.4:-59372233 MS.gene010745:CDS
AAAATCATATGCTGAGGAAA+CGG 0.519993 7.4:+59372491 None:intergenic
CAGCATCAACAACAATCAGT+TGG 0.520795 7.4:-59373604 MS.gene010745:CDS
AGCATCAACAACAATCAGTT+GGG 0.523329 7.4:-59373603 MS.gene010745:CDS
CCAAGCATTGCTTGAAGCTG+TGG 0.524919 7.4:-59372927 MS.gene010745:CDS
CTTCGCCGCCACCGCTTCCA+GGG 0.526440 7.4:+59373263 None:intergenic
TCATCCCTCTACTACCAAAA+GGG 0.532544 7.4:+59373692 None:intergenic
TGTCTTGTGTTGGCAAAGGA+AGG 0.534777 7.4:-59372180 MS.gene010745:CDS
ATGGGGAACCCTGGAAGCGG+TGG 0.534973 7.4:-59373271 MS.gene010745:CDS
CGATCATCTGAAGTACATCC+GGG 0.536848 7.4:+59372408 None:intergenic
GACAGTGTTGAGGATGAAGT+AGG 0.538311 7.4:+59374120 None:intergenic
CTCTTGACCCGAATCCAAGA+AGG 0.539089 7.4:+59373399 None:intergenic
CAAGCAAACCGGAATAAGAC+TGG 0.539954 7.4:+59372462 None:intergenic
CGGTGGCGGCGAAGATGTGT+CGG 0.546303 7.4:-59373254 MS.gene010745:CDS
GATATTGAAGATGCATCTAT+GGG 0.546979 7.4:-59373910 MS.gene010745:CDS
TAGTAACTTCACAGAGTCGC+AGG 0.548006 7.4:-59372267 MS.gene010745:CDS
ATTGTTATCCTTTGCGCCGG+TGG 0.548468 7.4:+59374053 None:intergenic
AAGCACCAATCTTGAGCAAG+AGG 0.549041 7.4:+59373005 None:intergenic
CTTTGAAAAGGCTTCCCCAT+AGG 0.549307 7.4:+59373115 None:intergenic
CAAGTTTCACTTTCTCATGG+TGG 0.549648 7.4:-59373637 MS.gene010745:CDS
GCCTCCGGCGCTACCGTGTG+AGG 0.550488 7.4:+59374095 None:intergenic
GCACTAAAGGCAGGTACGAT+GGG 0.551600 7.4:+59372585 None:intergenic
TTCCTCACCATCTGCAGCAG+AGG 0.553713 7.4:-59373315 MS.gene010745:CDS
AAGCAGAAAATGGGGAACCC+TGG 0.559202 7.4:-59373280 MS.gene010745:CDS
TGTTGAGGATGAAGTAGGAG+TGG 0.560505 7.4:+59374125 None:intergenic
TCCTGGTAGGGGATTTCATG+TGG 0.561432 7.4:-59372222 MS.gene010745:CDS
GTCAAGAGATGTTTCTTAGG+AGG 0.562943 7.4:-59373384 MS.gene010745:CDS
AGGCAGAGTGTTTGGTGCAG+AGG 0.564913 7.4:-59372247 MS.gene010745:CDS
GAATGATCTTGATCTTGACT+TGG 0.565052 7.4:+59373955 None:intergenic
GGCCTCTGCTGCAGATGGTG+AGG 0.565284 7.4:+59373313 None:intergenic
TCCTCACACGGTAGCGCCGG+AGG 0.569283 7.4:-59374096 MS.gene010745:CDS
TCTTCCTCACACGGTAGCGC+CGG 0.570460 7.4:-59374099 MS.gene010745:CDS
GAGAATCTGAAGCAATATGC+TGG 0.570600 7.4:-59372737 MS.gene010745:CDS
TCCACATGAAATCCCCTACC+AGG 0.574086 7.4:+59372221 None:intergenic
TTAACAAATCGAAGCACTAA+AGG 0.575268 7.4:+59372572 None:intergenic
GGTAATCCGGAACACGCGCA+AGG 0.576781 7.4:-59373169 MS.gene010745:CDS
GGTATTGTTATCCTTTGCGC+CGG 0.583054 7.4:+59374050 None:intergenic
GCATTGCTTGAAGCTGTGGA+AGG 0.584725 7.4:-59372923 MS.gene010745:CDS
AGCACTAAAGGCAGGTACGA+TGG 0.584829 7.4:+59372584 None:intergenic
CGATAGCACCACCGGCGCAA+AGG 0.585841 7.4:-59374061 MS.gene010745:CDS
GTCGGCGCATCAGTTTCAGC+AGG 0.589273 7.4:-59373236 MS.gene010745:CDS
TGCAGCTGAGAATATGTGAA+AGG 0.595086 7.4:+59373499 None:intergenic
TCAATTTCATCGTGGTGTGA+GGG 0.596797 7.4:+59372776 None:intergenic
GCAAAGGAAGGATCTCATCT+CGG 0.596929 7.4:-59372168 MS.gene010745:CDS
AAAACCTACTCTTGTCGTCA+GGG 0.598538 7.4:-59372307 MS.gene010745:CDS
GCTTCTACCGATAGCACCAC+CGG 0.599672 7.4:-59374069 MS.gene010745:CDS
GGATAGGAGTTGTGATCGAA+CGG 0.600755 7.4:-59372519 MS.gene010745:CDS
ATGTATTCTTCAAAAGGTAA+GGG 0.601264 7.4:+59374318 None:intergenic
CAAATCGAAGCACTAAAGGC+AGG 0.602527 7.4:+59372576 None:intergenic
TTATGCAGGAGTTAGCACTA+AGG 0.606201 7.4:-59372841 MS.gene010745:CDS
TGAAGGTAAAAGATGTGGAA+TGG 0.609884 7.4:-59374007 MS.gene010745:CDS
AAAATGGGGAACCCTGGAAG+CGG 0.610138 7.4:-59373274 MS.gene010745:CDS
CAAGCTGAAGGTAAAAGATG+TGG 0.613564 7.4:-59374012 MS.gene010745:CDS
AAATTGTCGTAACATTGGAT+AGG 0.615531 7.4:-59372535 MS.gene010745:CDS
AGAACCCTGACGACAAGAGT+AGG 0.620221 7.4:+59372303 None:intergenic
AGGTAAAAGATGTGGAATGG+AGG 0.623374 7.4:-59374004 MS.gene010745:CDS
CAGGAGTTAGCACTAAGGAA+TGG 0.623926 7.4:-59372836 MS.gene010745:CDS
TCTTGACCCGAATCCAAGAA+GGG 0.632079 7.4:+59373400 None:intergenic
ATCACCAAATTTCTCCTATG+GGG 0.632427 7.4:-59373129 MS.gene010745:CDS
TCAACACTGTCTTCCTCACA+CGG 0.633334 7.4:-59374108 MS.gene010745:CDS
ACGCGCAAGGGATATTGGCG+CGG 0.634995 7.4:-59373156 MS.gene010745:CDS
TGGTTCATAACAAACTGATG+AGG 0.638887 7.4:+59373562 None:intergenic
AGAAACATACCACAAGCTGA+AGG 0.641675 7.4:-59374024 MS.gene010745:CDS
GTAATCCGGAACACGCGCAA+GGG 0.641709 7.4:-59373168 MS.gene010745:CDS
ACTGCTTCGCAATCGCGTAG+TGG 0.643756 7.4:+59372644 None:intergenic
AATGCAGTGATCTTGAGTGC+AGG 0.644744 7.4:+59372806 None:intergenic
GAGGGAAAATTGTTGCTATG+CGG 0.647727 7.4:-59374202 MS.gene010745:CDS
GTGAAGTTACTAAACGTCAA+CGG 0.647933 7.4:+59372278 None:intergenic
GAGTTAGCACTAAGGAATGG+TGG 0.649571 7.4:-59372833 MS.gene010745:CDS
TGGCGCATAAGCAGAAAATG+GGG 0.679052 7.4:-59373288 MS.gene010745:CDS
GCTGCAGAACTTATAGACGC+CGG 0.689078 7.4:-59373190 MS.gene010745:CDS
TGTTTGTGTCAATGTCCACC+CGG 0.690393 7.4:-59372426 MS.gene010745:CDS
CCAGCTAAAAGACTCAATTG+TGG 0.702219 7.4:-59373448 MS.gene010745:CDS
TCATCTGAAGTACATCCGGG+TGG 0.714970 7.4:+59372411 None:intergenic
AACTGAGCTCAATTTCATCG+TGG 0.737179 7.4:+59372768 None:intergenic
GTGTGAGGAAGACAGTGTTG+AGG 0.783398 7.4:+59374110 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCCATATTGAAATTGATAA+TGG - chr7.4:59372543-59372562 MS.gene010745:CDS 20.0%
!! TTCCATTATCAATTTCAATA+TGG + chr7.4:59372548-59372567 None:intergenic 20.0%
!!! ATAGATTTTGATATTGGTTT+TGG - chr7.4:59373597-59373616 MS.gene010745:CDS 20.0%
!!! ATTCAATGGTTTTAGTTTTA+TGG - chr7.4:59372648-59372667 MS.gene010745:CDS 20.0%
!!! CACATAATAGATTTTGATAT+TGG - chr7.4:59373591-59373610 MS.gene010745:CDS 20.0%
! AAGTTACCATTTGAAGAAAT+AGG + chr7.4:59372697-59372716 None:intergenic 25.0%
! AGTTACCATTTGAAGAAATA+GGG + chr7.4:59372696-59372715 None:intergenic 25.0%
! ATGTATTCTTCAAAAGGTAA+GGG + chr7.4:59372163-59372182 None:intergenic 25.0%
! TAATTTGAGAAAGAGCAAAT+AGG + chr7.4:59373873-59373892 None:intergenic 25.0%
! TATGTATTCTTCAAAAGGTA+AGG + chr7.4:59372164-59372183 None:intergenic 25.0%
! TCAAAAACAACAACAGAATT+GGG + chr7.4:59372310-59372329 None:intergenic 25.0%
! TTTCCTATGTATTCTTCAAA+AGG + chr7.4:59372169-59372188 None:intergenic 25.0%
! TTTGAAGAATACATAGGAAA+AGG - chr7.4:59372169-59372188 MS.gene010745:CDS 25.0%
!! TATAATTGATCAGCTTTTCA+AGG - chr7.4:59373266-59373285 MS.gene010745:CDS 25.0%
!!! TTACCTTTTGAAGAATACAT+AGG - chr7.4:59372163-59372182 MS.gene010745:CDS 25.0%
!!! TTTGTTGATTTGGTTTTTTG+AGG + chr7.4:59372333-59372352 None:intergenic 25.0%
AAAATCATATGCTGAGGAAA+CGG + chr7.4:59373990-59374009 None:intergenic 30.0%
AAATTGTCGTAACATTGGAT+AGG - chr7.4:59373943-59373962 MS.gene010745:CDS 30.0%
AATCACCAAATTTCTCCTAT+GGG - chr7.4:59373348-59373367 MS.gene010745:CDS 30.0%
ACTTGTGAAGAACTGAAATT+AGG + chr7.4:59372826-59372845 None:intergenic 30.0%
AGATATTGAAGATGCATCTA+TGG - chr7.4:59372567-59372586 MS.gene010745:CDS 30.0%
CAACAAGATGTTGAATTCAA+TGG - chr7.4:59372634-59372653 MS.gene010745:CDS 30.0%
CTTGTGAAGAACTGAAATTA+GGG + chr7.4:59372825-59372844 None:intergenic 30.0%
GATATTGAAGATGCATCTAT+GGG - chr7.4:59372568-59372587 MS.gene010745:CDS 30.0%
GTCAAAAACAACAACAGAAT+TGG + chr7.4:59372311-59372330 None:intergenic 30.0%
TGAAAGGAAAAACCAAACTA+GGG + chr7.4:59372966-59372985 None:intergenic 30.0%
! ATTTGTTCTGATTTCCCTTT+TGG - chr7.4:59372772-59372791 MS.gene010745:CDS 30.0%
! TCCAATGTTACGACAATTTT+AGG + chr7.4:59373942-59373961 None:intergenic 30.0%
! TTAACAAATCGAAGCACTAA+AGG + chr7.4:59373909-59373928 None:intergenic 30.0%
! TTAAGCAAGCTTTTACAAGT+TGG - chr7.4:59372592-59372611 MS.gene010745:CDS 30.0%
!!! AAGGGCTGCTTTTTATTTTA+AGG - chr7.4:59373383-59373402 MS.gene010745:CDS 30.0%
!!! GATTTTGATATTGGTTTTGG+TGG - chr7.4:59373600-59373619 MS.gene010745:CDS 30.0%
AAAACAAGCTTCTCAATTGC+CGG + chr7.4:59374113-59374132 None:intergenic 35.0%
AAATTTGCAAACTGCAGAAC+AGG + chr7.4:59373522-59373541 None:intergenic 35.0%
ACAATGGTCTTCATTTATGC+AGG - chr7.4:59373623-59373642 MS.gene010745:CDS 35.0%
AGCATCAACAACAATCAGTT+GGG - chr7.4:59372875-59372894 MS.gene010745:CDS 35.0%
AGTCTCTGAATTCTGTTTCA+TGG - chr7.4:59373805-59373824 MS.gene010745:CDS 35.0%
AGTGCAAAAATCATATGCTG+AGG + chr7.4:59373996-59374015 None:intergenic 35.0%
ATCAAGTGATTCAAGCAAAC+CGG + chr7.4:59374030-59374049 None:intergenic 35.0%
ATCACCAAATTTCTCCTATG+GGG - chr7.4:59373349-59373368 MS.gene010745:CDS 35.0%
CAATCACCAAATTTCTCCTA+TGG - chr7.4:59373347-59373366 MS.gene010745:CDS 35.0%
GAATGATCTTGATCTTGACT+TGG + chr7.4:59372526-59372545 None:intergenic 35.0%
GCCTAAAATTGTCGTAACAT+TGG - chr7.4:59373938-59373957 MS.gene010745:CDS 35.0%
GTGAAAGGAAAAACCAAACT+AGG + chr7.4:59372967-59372986 None:intergenic 35.0%
GTGAAGTTACTAAACGTCAA+CGG + chr7.4:59374203-59374222 None:intergenic 35.0%
TCACAAGTTTCACTTTCTCA+TGG - chr7.4:59372838-59372857 MS.gene010745:CDS 35.0%
TGAAGGTAAAAGATGTGGAA+TGG - chr7.4:59372471-59372490 MS.gene010745:CDS 35.0%
TGGTTCATAACAAACTGATG+AGG + chr7.4:59372919-59372938 None:intergenic 35.0%
! AAGAACAGTTTTTGCAAAGG+TGG - chr7.4:59372254-59372273 MS.gene010745:CDS 35.0%
! AGCAAGAACAGTTTTTGCAA+AGG - chr7.4:59372251-59372270 MS.gene010745:CDS 35.0%
! CTTGACCCTATTTCTTCAAA+TGG - chr7.4:59372688-59372707 MS.gene010745:CDS 35.0%
! TAAAAAGCAGCCCTTTGAAA+AGG + chr7.4:59373378-59373397 None:intergenic 35.0%
!! ATTTCCCTTTTGGTAGTAGA+GGG - chr7.4:59372782-59372801 MS.gene010745:CDS 35.0%
!! GCAATTGAGAAGCTTGTTTT+GGG - chr7.4:59374113-59374132 MS.gene010745:CDS 35.0%
!! GGAAAAGGTGTGTTAGATTT+TGG - chr7.4:59372184-59372203 MS.gene010745:CDS 35.0%
!!! ATATTGGTTTTGGTGGACAA+TGG - chr7.4:59373607-59373626 MS.gene010745:CDS 35.0%
!!! GGCTGCTTTTTATTTTAAGG+AGG - chr7.4:59373386-59373405 MS.gene010745:CDS 35.0%
AAAAACCTACTCTTGTCGTC+AGG - chr7.4:59374170-59374189 MS.gene010745:CDS 40.0%
AAAACCTACTCTTGTCGTCA+GGG - chr7.4:59374171-59374190 MS.gene010745:CDS 40.0%
AAAGATGTGGAATGGAGGAT+TGG - chr7.4:59372479-59372498 MS.gene010745:CDS 40.0%
AACTGAGCTCAATTTCATCG+TGG + chr7.4:59373713-59373732 None:intergenic 40.0%
AAGATACCCTTCTTGGATTC+GGG - chr7.4:59373072-59373091 MS.gene010745:CDS 40.0%
AAGATGTGGAATGGAGGATT+GGG - chr7.4:59372480-59372499 MS.gene010745:CDS 40.0%
AATGGCGCATAAGCAGAAAA+TGG - chr7.4:59373188-59373207 MS.gene010745:CDS 40.0%
AATTCCGAAGATACCCTTCT+TGG - chr7.4:59373065-59373084 MS.gene010745:CDS 40.0%
AGAAACATACCACAAGCTGA+AGG - chr7.4:59372454-59372473 MS.gene010745:CDS 40.0%
AGAATTCGCTTGTCTTGTGT+TGG - chr7.4:59374288-59374307 MS.gene010745:CDS 40.0%
AGGGAAAATTGTTGCTATGC+GGG - chr7.4:59372277-59372296 MS.gene010745:CDS 40.0%
AGGTAAAAGATGTGGAATGG+AGG - chr7.4:59372474-59372493 MS.gene010745:CDS 40.0%
ATCTCATCTCGGTTTCAACT+TGG - chr7.4:59374321-59374340 MS.gene010745:CDS 40.0%
ATGGCGCATAAGCAGAAAAT+GGG - chr7.4:59373189-59373208 MS.gene010745:CDS 40.0%
CAAGCTGAAGGTAAAAGATG+TGG - chr7.4:59372466-59372485 MS.gene010745:CDS 40.0%
CAAGTTTCACTTTCTCATGG+TGG - chr7.4:59372841-59372860 MS.gene010745:CDS 40.0%
CAGCATCAACAACAATCAGT+TGG - chr7.4:59372874-59372893 MS.gene010745:CDS 40.0%
CCAGCTAAAAGACTCAATTG+TGG - chr7.4:59373030-59373049 MS.gene010745:CDS 40.0%
CGAGAAATACTATCTGCAAC+CGG - chr7.4:59374091-59374110 MS.gene010745:CDS 40.0%
GAAGATACCCTTCTTGGATT+CGG - chr7.4:59373071-59373090 MS.gene010745:CDS 40.0%
GAGGGAAAATTGTTGCTATG+CGG - chr7.4:59372276-59372295 MS.gene010745:CDS 40.0%
GGAAAAACCAAACTAGGGTT+AGG + chr7.4:59372961-59372980 None:intergenic 40.0%
GTCAAGAGATGTTTCTTAGG+AGG - chr7.4:59373094-59373113 MS.gene010745:CDS 40.0%
GTTTATGCCTAACCCTAGTT+TGG - chr7.4:59372951-59372970 MS.gene010745:CDS 40.0%
TCAATTTCATCGTGGTGTGA+GGG + chr7.4:59373705-59373724 None:intergenic 40.0%
TCATCCCTCTACTACCAAAA+GGG + chr7.4:59372789-59372808 None:intergenic 40.0%
TGCAGCTGAGAATATGTGAA+AGG + chr7.4:59372982-59373001 None:intergenic 40.0%
TTATGCAGGAGTTAGCACTA+AGG - chr7.4:59373637-59373656 MS.gene010745:CDS 40.0%
TTCATCCCTCTACTACCAAA+AGG + chr7.4:59372790-59372809 None:intergenic 40.0%
! AACAGTTTTTGCAAAGGTGG+AGG - chr7.4:59372257-59372276 MS.gene010745:CDS 40.0%
! ACAGTTTTTGCAAAGGTGGA+GGG - chr7.4:59372258-59372277 MS.gene010745:CDS 40.0%
! AGCTTGTGGTATGTTTCTGT+TGG + chr7.4:59372452-59372471 None:intergenic 40.0%
! ATTTTCTGCTTATGCGCCAT+TGG + chr7.4:59373189-59373208 None:intergenic 40.0%
! CATCTTTTACCTTCAGCTTG+TGG + chr7.4:59372466-59372485 None:intergenic 40.0%
! CCACAATTGAGTCTTTTAGC+TGG + chr7.4:59373033-59373052 None:intergenic 40.0%
! GACAAGAGTAGGTTTTTCCA+AGG + chr7.4:59374167-59374186 None:intergenic 40.0%
! GAGAATCTGAAGCAATATGC+TGG - chr7.4:59373741-59373760 MS.gene010745:CDS 40.0%
! GCATAAACTGAGCTTGGTTT+TGG + chr7.4:59372939-59372958 None:intergenic 40.0%
! TATGGGGAAGCCTTTTCAAA+GGG - chr7.4:59373365-59373384 MS.gene010745:CDS 40.0%
! TCGATCATCTGAAGTACATC+CGG + chr7.4:59374074-59374093 None:intergenic 40.0%
!! CAATTGAGTCTTTTAGCTGG+TGG + chr7.4:59373030-59373049 None:intergenic 40.0%
!! GAATCCAAGAAGGGTATCTT+CGG + chr7.4:59373072-59373091 None:intergenic 40.0%
!! GATTTCCCTTTTGGTAGTAG+AGG - chr7.4:59372781-59372800 MS.gene010745:CDS 40.0%
!! GGCAATTGAGAAGCTTGTTT+TGG - chr7.4:59374112-59374131 MS.gene010745:CDS 40.0%
!! GTAGGAGTGGTTTGTTGATT+TGG + chr7.4:59372343-59372362 None:intergenic 40.0%
!! TTTGCACTCCAGTCTTATTC+CGG - chr7.4:59374008-59374027 MS.gene010745:CDS 40.0%
AAGCACCAATCTTGAGCAAG+AGG + chr7.4:59373476-59373495 None:intergenic 45.0%
AATGCAGTGATCTTGAGTGC+AGG + chr7.4:59373675-59373694 None:intergenic 45.0%
ACTTATAGACGCCGGTAATC+CGG - chr7.4:59373296-59373315 MS.gene010745:CDS 45.0%
AGCTTCAAGCAATGCTTGGT+TGG + chr7.4:59373550-59373569 None:intergenic 45.0%
ATCTTGAGCAAGAGGCTAGT+TGG + chr7.4:59373468-59373487 None:intergenic 45.0%
CAAGCAAACCGGAATAAGAC+TGG + chr7.4:59374019-59374038 None:intergenic 45.0%
CAGGAGTTAGCACTAAGGAA+TGG - chr7.4:59373642-59373661 MS.gene010745:CDS 45.0%
CGGGTCAAGAGATGTTTCTT+AGG - chr7.4:59373091-59373110 MS.gene010745:CDS 45.0%
CTCAATTTCATCGTGGTGTG+AGG + chr7.4:59373706-59373725 None:intergenic 45.0%
GAGTTAGCACTAAGGAATGG+TGG - chr7.4:59373645-59373664 MS.gene010745:CDS 45.0%
GCAAAGGAAGGATCTCATCT+CGG - chr7.4:59374310-59374329 MS.gene010745:CDS 45.0%
GCTTCCCCATAGGAGAAATT+TGG + chr7.4:59373356-59373375 None:intergenic 45.0%
GGATAGGAGTTGTGATCGAA+CGG - chr7.4:59373959-59373978 MS.gene010745:CDS 45.0%
GGTATTGTTATCCTTTGCGC+CGG + chr7.4:59372431-59372450 None:intergenic 45.0%
GGTTAGGCATAAACTGAGCT+TGG + chr7.4:59372945-59372964 None:intergenic 45.0%
TAGTAACTTCACAGAGTCGC+AGG - chr7.4:59374211-59374230 MS.gene010745:CDS 45.0%
TCAACACTGTCTTCCTCACA+CGG - chr7.4:59372370-59372389 MS.gene010745:CDS 45.0%
TCTTGACCCGAATCCAAGAA+GGG + chr7.4:59373081-59373100 None:intergenic 45.0%
TGGCGCATAAGCAGAAAATG+GGG - chr7.4:59373190-59373209 MS.gene010745:CDS 45.0%
TGTTGAGGATGAAGTAGGAG+TGG + chr7.4:59372356-59372375 None:intergenic 45.0%
TGTTTGTGTCAATGTCCACC+CGG - chr7.4:59374052-59374071 MS.gene010745:CDS 45.0%
TTCTATCCTGCGAACCCAAA+CGG + chr7.4:59374139-59374158 None:intergenic 45.0%
! ACTAGCCTCTTGCTCAAGAT+TGG - chr7.4:59373468-59373487 MS.gene010745:CDS 45.0%
! CAAATCGAAGCACTAAAGGC+AGG + chr7.4:59373905-59373924 None:intergenic 45.0%
! CGATCATCTGAAGTACATCC+GGG + chr7.4:59374073-59374092 None:intergenic 45.0%
! CTATGGGGAAGCCTTTTCAA+AGG - chr7.4:59373364-59373383 MS.gene010745:CDS 45.0%
! CTTTGAAAAGGCTTCCCCAT+AGG + chr7.4:59373366-59373385 None:intergenic 45.0%
! GACAGTGTTGAGGATGAAGT+AGG + chr7.4:59372361-59372380 None:intergenic 45.0%
! TGTCTTGTGTTGGCAAAGGA+AGG - chr7.4:59374298-59374317 MS.gene010745:CDS 45.0%
!!! AAGCTTGTTTTGGGCCGTTT+GGG - chr7.4:59374122-59374141 MS.gene010745:CDS 45.0%
AAAATGGGGAACCCTGGAAG+CGG - chr7.4:59373204-59373223 MS.gene010745:CDS 50.0%
AAGCAGAAAATGGGGAACCC+TGG - chr7.4:59373198-59373217 MS.gene010745:CDS 50.0%
AATATCCCTTGCGCGTGTTC+CGG + chr7.4:59373318-59373337 None:intergenic 50.0%
AGAACCCTGACGACAAGAGT+AGG + chr7.4:59374178-59374197 None:intergenic 50.0%
AGCACTAAAGGCAGGTACGA+TGG + chr7.4:59373897-59373916 None:intergenic 50.0%
ATTGTTATCCTTTGCGCCGG+TGG + chr7.4:59372428-59372447 None:intergenic 50.0%
CCACAGCTTCAAGCAATGCT+TGG + chr7.4:59373554-59373573 None:intergenic 50.0%
CGCAGGATAGAACACTTCCT+TGG - chr7.4:59374147-59374166 MS.gene010745:CDS 50.0%
CTCTTGACCCGAATCCAAGA+AGG + chr7.4:59373082-59373101 None:intergenic 50.0%
GCACTAAAGGCAGGTACGAT+GGG + chr7.4:59373896-59373915 None:intergenic 50.0%
GCATTGCTTGAAGCTGTGGA+AGG - chr7.4:59373555-59373574 MS.gene010745:CDS 50.0%
GCTGCAGAACTTATAGACGC+CGG - chr7.4:59373288-59373307 MS.gene010745:CDS 50.0%
GTGGCTGAAGCTGAATCTCT+TGG + chr7.4:59373011-59373030 None:intergenic 50.0%
GTGTGAGGAAGACAGTGTTG+AGG + chr7.4:59372371-59372390 None:intergenic 50.0%
TCCACATGAAATCCCCTACC+AGG + chr7.4:59374260-59374279 None:intergenic 50.0%
TCCTGGTAGGGGATTTCATG+TGG - chr7.4:59374256-59374275 MS.gene010745:CDS 50.0%
! CCAAGCATTGCTTGAAGCTG+TGG - chr7.4:59373551-59373570 MS.gene010745:CDS 50.0%
! CGCTTGTCTTGTGTTGGCAA+AGG - chr7.4:59374294-59374313 MS.gene010745:CDS 50.0%
! TCATCTGAAGTACATCCGGG+TGG + chr7.4:59374070-59374089 None:intergenic 50.0%
!! TGTTTGGTGCAGAGGATTCC+TGG - chr7.4:59374239-59374258 MS.gene010745:CDS 50.0%
!!! GAAGCTTGTTTTGGGCCGTT+TGG - chr7.4:59374121-59374140 MS.gene010745:CDS 50.0%
ACGCGATTGCGAAGCAGTTG+TGG - chr7.4:59373839-59373858 MS.gene010745:CDS 55.0%
ACTGCTTCGCAATCGCGTAG+TGG + chr7.4:59373837-59373856 None:intergenic 55.0%
GCTTCTACCGATAGCACCAC+CGG - chr7.4:59372409-59372428 MS.gene010745:CDS 55.0%
GGAACACGCGCAAGGGATAT+TGG - chr7.4:59373317-59373336 MS.gene010745:CDS 55.0%
GGTGCAGAGGATTCCTGGTA+GGG - chr7.4:59374244-59374263 MS.gene010745:CDS 55.0%
GTAATCCGGAACACGCGCAA+GGG - chr7.4:59373310-59373329 MS.gene010745:CDS 55.0%
GTGCAGAGGATTCCTGGTAG+GGG - chr7.4:59374245-59374264 MS.gene010745:CDS 55.0%
TGGTGCAGAGGATTCCTGGT+AGG - chr7.4:59374243-59374262 MS.gene010745:CDS 55.0%
TTCCTCACCATCTGCAGCAG+AGG - chr7.4:59373163-59373182 MS.gene010745:CDS 55.0%
TTGCGCGTGTTCCGGATTAC+CGG + chr7.4:59373310-59373329 None:intergenic 55.0%
! AGAGTCGCAGGCAGAGTGTT+TGG - chr7.4:59374223-59374242 MS.gene010745:CDS 55.0%
!! AGGCAGAGTGTTTGGTGCAG+AGG - chr7.4:59374231-59374250 MS.gene010745:CDS 55.0%
ACGCGCAAGGGATATTGGCG+CGG - chr7.4:59373322-59373341 MS.gene010745:CDS 60.0%
CCATCTGCAGCAGAGGCCAA+TGG - chr7.4:59373170-59373189 MS.gene010745:CDS 60.0%
GGTAATCCGGAACACGCGCA+AGG - chr7.4:59373309-59373328 MS.gene010745:CDS 60.0%
GTCGGCGCATCAGTTTCAGC+AGG - chr7.4:59373242-59373261 MS.gene010745:CDS 60.0%
TCGCAATCGCGTAGTGGCTG+CGG + chr7.4:59373831-59373850 None:intergenic 60.0%
TCTTCCTCACACGGTAGCGC+CGG - chr7.4:59372379-59372398 MS.gene010745:CDS 60.0%
! CCATTGGCCTCTGCTGCAGA+TGG + chr7.4:59373173-59373192 None:intergenic 60.0%
! TTTGGGCCGTTTGGGTTCGC+AGG - chr7.4:59374130-59374149 MS.gene010745:CDS 60.0%
!! CTTTGCGCCGGTGGTGCTAT+CGG + chr7.4:59372419-59372438 None:intergenic 60.0%
ATGGGGAACCCTGGAAGCGG+TGG - chr7.4:59373207-59373226 MS.gene010745:CDS 65.0%
CGATAGCACCACCGGCGCAA+AGG - chr7.4:59372417-59372436 MS.gene010745:CDS 65.0%
GGCCTCTGCTGCAGATGGTG+AGG + chr7.4:59373168-59373187 None:intergenic 65.0%
! CGGTGGCGGCGAAGATGTGT+CGG - chr7.4:59373224-59373243 MS.gene010745:CDS 65.0%
!! ATCGGTAGAAGCGCCGCCTC+CGG + chr7.4:59372401-59372420 None:intergenic 65.0%
CTTCGCCGCCACCGCTTCCA+GGG + chr7.4:59373218-59373237 None:intergenic 70.0%
GGGAACCCTGGAAGCGGTGG+CGG - chr7.4:59373210-59373229 MS.gene010745:CDS 70.0%
TCTTCGCCGCCACCGCTTCC+AGG + chr7.4:59373219-59373238 None:intergenic 70.0%
! TCACACGGTAGCGCCGGAGG+CGG - chr7.4:59372385-59372404 MS.gene010745:CDS 70.0%
! TCCTCACACGGTAGCGCCGG+AGG - chr7.4:59372382-59372401 MS.gene010745:CDS 70.0%
GCCTCCGGCGCTACCGTGTG+AGG + chr7.4:59372386-59372405 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 59372148 59374352 59372148 ID=MS.gene010745
chr7.4 mRNA 59372148 59374352 59372148 ID=MS.gene010745.t1;Parent=MS.gene010745
chr7.4 exon 59372148 59374352 59372148 ID=MS.gene010745.t1.exon1;Parent=MS.gene010745.t1
chr7.4 CDS 59372148 59374352 59372148 ID=cds.MS.gene010745.t1;Parent=MS.gene010745.t1
Gene Sequence

>MS.gene010745

ATGAAGGCTATGCCCTTACCTTTTGAAGAATACATAGGAAAAGGTGTGTTAGATTTTGGTTCAAGTGTTGTTGCTTCTTCAGATTCATATTTGTTTTCACAACAGCAAGAACAGTTTTTGCAAAGGTGGAGGGAAAATTGTTGCTATGCGGGCATTGAGCCCAATTCTGTTGTTGTTTTTGACCTCAAAAAACCAAATCAACAAACCACTCCTACTTCATCCTCAACACTGTCTTCCTCACACGGTAGCGCCGGAGGCGGCGCTTCTACCGATAGCACCACCGGCGCAAAGGATAACAATACCAACAGAAACATACCACAAGCTGAAGGTAAAAGATGTGGAATGGAGGATTGGGAGAGTGTGTTATCTGAATCACCAAGTCAAGATCAAGATCATTCCATATTGAAATTGATAATGGAAGATATTGAAGATGCATCTATGGGATTAAGCAAGCTTTTACAAGTTGGAACTAGTAATTCTCATTCTCAACAAGATGTTGAATTCAATGGTTTTAGTTTTATGGATCAACAAAGTTCTGTACTTGACCCTATTTCTTCAAATGGTAACTTTGTAACTAGCATTGATTCTTCTTCTGTTGTTGCTACTACTGCTACTGCTGCTGAGATTTGTTCTGATTTCCCTTTTGGTAGTAGAGGGATGAATCAAATTCAAAACCCTAATTTCAGTTCTTCACAAGTTTCACTTTCTCATGGTGGTTTGTTTCATCAGCATCAACAACAATCAGTTGGGTCTCTTGATGAGAAGCTACCTCATCAGTTTGTTATGAACCAAAACCAAGCTCAGTTTATGCCTAACCCTAGTTTGGTTTTTCCTTTCACATATTCTCAGCTGCAAGAAAACCAAGAGATTCAGCTTCAGCCACCAGCTAAAAGACTCAATTGTGGAACAAATTATGAAATTCCGAAGATACCCTTCTTGGATTCGGGTCAAGAGATGTTTCTTAGGAGGCAACAACAGCATCAGCAGCAGCAACATCAGCAGCAGCTTCAATTGCTTCCTCACCATCTGCAGCAGAGGCCAATGGCGCATAAGCAGAAAATGGGGAACCCTGGAAGCGGTGGCGGCGAAGATGTGTCGGCGCATCAGTTTCAGCAGGCTATAATTGATCAGCTTTTCAAGGCTGCAGAACTTATAGACGCCGGTAATCCGGAACACGCGCAAGGGATATTGGCGCGGCTCAATCACCAAATTTCTCCTATGGGGAAGCCTTTTCAAAGGGCTGCTTTTTATTTTAAGGAGGCATTGCAATTGCTTCTTCAATCAAATGTTAACAACAGCAACAACAACAGCTTTTCACCAACTAGCCTCTTGCTCAAGATTGGTGCTTATAAATCATTCTCAGAAATCTCACCTGTTCTGCAGTTTGCAAATTTCACTTCCAACCAAGCATTGCTTGAAGCTGTGGAAGGTTTCGATCGAATTCACATAATAGATTTTGATATTGGTTTTGGTGGACAATGGTCTTCATTTATGCAGGAGTTAGCACTAAGGAATGGTGGTGCACCTGCACTCAAGATCACTGCATTTGTTTCGCCCTCACACCACGATGAAATTGAGCTCAGTTTCACTAACGAGAATCTGAAGCAATATGCTGGTGAAATTAACATGTCATTTGAGCTCGAGATTCTGACACTTGAGTCTCTGAATTCTGTTTCATGGCCGCAGCCACTACGCGATTGCGAAGCAGTTGTGGTTAACTTGCCTATTTGCTCTTTCTCAAATTACCCATCGTACCTGCCTTTAGTGCTTCGATTTGTTAAGCAGCTCATGCCTAAAATTGTCGTAACATTGGATAGGAGTTGTGATCGAACGGATGCACCGTTTCCTCAGCATATGATTTTTGCACTCCAGTCTTATTCCGGTTTGCTTGAATCACTTGATGCTGTTTGTGTCAATGTCCACCCGGATGTACTTCAGATGATCGAGAAATACTATCTGCAACCGGCAATTGAGAAGCTTGTTTTGGGCCGTTTGGGTTCGCAGGATAGAACACTTCCTTGGAAAAACCTACTCTTGTCGTCAGGGTTCTCTCCGTTGACGTTTAGTAACTTCACAGAGTCGCAGGCAGAGTGTTTGGTGCAGAGGATTCCTGGTAGGGGATTTCATGTGGAGAAGAAGCAGAATTCGCTTGTCTTGTGTTGGCAAAGGAAGGATCTCATCTCGGTTTCAACTTGGAGATGCTGA
Protein sequence

>MS.gene010745.t1

MKAMPLPFEEYIGKGVLDFGSSVVASSDSYLFSQQQEQFLQRWRENCCYAGIEPNSVVVFDLKKPNQQTTPTSSSTLSSSHGSAGGGASTDSTTGAKDNNTNRNIPQAEGKRCGMEDWESVLSESPSQDQDHSILKLIMEDIEDASMGLSKLLQVGTSNSHSQQDVEFNGFSFMDQQSSVLDPISSNGNFVTSIDSSSVVATTATAAEICSDFPFGSRGMNQIQNPNFSSSQVSLSHGGLFHQHQQQSVGSLDEKLPHQFVMNQNQAQFMPNPSLVFPFTYSQLQENQEIQLQPPAKRLNCGTNYEIPKIPFLDSGQEMFLRRQQQHQQQQHQQQLQLLPHHLQQRPMAHKQKMGNPGSGGGEDVSAHQFQQAIIDQLFKAAELIDAGNPEHAQGILARLNHQISPMGKPFQRAAFYFKEALQLLLQSNVNNSNNNSFSPTSLLLKIGAYKSFSEISPVLQFANFTSNQALLEAVEGFDRIHIIDFDIGFGGQWSSFMQELALRNGGAPALKITAFVSPSHHDEIELSFTNENLKQYAGEINMSFELEILTLESLNSVSWPQPLRDCEAVVVNLPICSFSNYPSYLPLVLRFVKQLMPKIVVTLDRSCDRTDAPFPQHMIFALQSYSGLLESLDAVCVNVHPDVLQMIEKYYLQPAIEKLVLGRLGSQDRTLPWKNLLLSSGFSPLTFSNFTESQAECLVQRIPGRGFHVEKKQNSLVLCWQRKDLISVSTWRC