Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011042.t1 | XP_003622814.1 | 98.7 | 633 | 8 | 0 | 1 | 633 | 31 | 663 | 0.00E+00 | 1224.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011042.t1 | O50064 | 76.3 | 629 | 141 | 4 | 3 | 630 | 33 | 654 | 5.7e-272 | 937.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011042.t1 | G7KZ28 | 98.7 | 633 | 8 | 0 | 1 | 633 | 31 | 663 | 0.0e+00 | 1224.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene011042 | MS.gene91965 | PPI |
| MS.gene011042 | MS.gene020935 | PPI |
| MS.gene38162 | MS.gene011042 | PPI |
| MS.gene011042 | MS.gene63839 | PPI |
| MS.gene011042 | MS.gene81418 | PPI |
| MS.gene020666 | MS.gene011042 | PPI |
| MS.gene011042 | MS.gene38106 | PPI |
| MS.gene011042 | MS.gene64600 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011042.t1 | MTR_7g052820 | 98.736 | 633 | 8 | 0 | 1 | 633 | 31 | 663 | 0.0 | 1285 |
| MS.gene011042.t1 | MTR_8g011460 | 85.714 | 637 | 82 | 5 | 1 | 632 | 31 | 663 | 0.0 | 1089 |
| MS.gene011042.t1 | MTR_5g098130 | 67.195 | 631 | 196 | 4 | 4 | 626 | 34 | 661 | 0.0 | 857 |
| MS.gene011042.t1 | MTR_5g094160 | 67.833 | 600 | 190 | 2 | 3 | 602 | 33 | 629 | 0.0 | 835 |
| MS.gene011042.t1 | MTR_5g098130 | 68.996 | 458 | 139 | 2 | 4 | 461 | 34 | 488 | 0.0 | 643 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011042.t1 | AT5G48460 | 76.312 | 629 | 141 | 4 | 3 | 630 | 33 | 654 | 0.0 | 981 |
| MS.gene011042.t1 | AT5G35700 | 64.526 | 623 | 212 | 3 | 8 | 624 | 38 | 657 | 0.0 | 832 |
| MS.gene011042.t1 | AT4G26700 | 67.622 | 593 | 189 | 3 | 3 | 595 | 33 | 622 | 0.0 | 826 |
| MS.gene011042.t1 | AT4G26700 | 67.622 | 593 | 189 | 3 | 3 | 595 | 33 | 622 | 0.0 | 826 |
| MS.gene011042.t1 | AT4G26700 | 67.622 | 593 | 189 | 3 | 3 | 595 | 33 | 622 | 0.0 | 826 |
| MS.gene011042.t1 | AT5G55400 | 66.779 | 596 | 192 | 5 | 3 | 596 | 33 | 624 | 0.0 | 820 |
| MS.gene011042.t1 | AT5G55400 | 66.779 | 596 | 192 | 5 | 3 | 596 | 33 | 624 | 0.0 | 820 |
| MS.gene011042.t1 | AT5G55400 | 66.779 | 596 | 192 | 5 | 3 | 596 | 33 | 624 | 0.0 | 820 |
| MS.gene011042.t1 | AT2G04750 | 62.921 | 623 | 218 | 4 | 8 | 626 | 38 | 651 | 0.0 | 790 |
| MS.gene011042.t1 | AT4G26700 | 66.483 | 543 | 179 | 3 | 3 | 545 | 33 | 572 | 0.0 | 738 |
| MS.gene011042.t1 | AT4G26700 | 66.483 | 543 | 179 | 3 | 3 | 545 | 33 | 572 | 0.0 | 738 |
| MS.gene011042.t1 | AT4G26700 | 66.483 | 543 | 179 | 3 | 3 | 545 | 33 | 572 | 0.0 | 738 |
| MS.gene011042.t1 | AT4G26700 | 73.144 | 458 | 121 | 2 | 139 | 596 | 19 | 474 | 0.0 | 694 |
Find 91 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTAACCAAGTTGTGAAAAT+TGG | 0.132470 | 7.1:+49159058 | MS.gene011042:CDS |
| ATTATTATTATCACCTGATT+TGG | 0.247767 | 7.1:-49158258 | None:intergenic |
| GTTAAATTAGATACAATTAT+TGG | 0.249136 | 7.1:+49157561 | MS.gene011042:intron |
| AAAGAAAACTCCTCAACTTT+TGG | 0.252764 | 7.1:+49157597 | MS.gene011042:CDS |
| CAAAAGACGGTGTTCTTCTT+TGG | 0.259070 | 7.1:+49156772 | MS.gene011042:CDS |
| TGTCACCTGGGATTGTTAAT+TGG | 0.292139 | 7.1:+49158984 | MS.gene011042:CDS |
| TCTGATCTCACAGATTATTA+AGG | 0.306527 | 7.1:+49157427 | MS.gene011042:CDS |
| ATACCTTGAAACTATATATA+TGG | 0.335185 | 7.1:-49159505 | None:intergenic |
| TTGCACATATCTTCCAAATC+AGG | 0.345047 | 7.1:+49158245 | MS.gene011042:CDS |
| TCAAGTTCTTTAGAAGTTGT+AGG | 0.351383 | 7.1:-49159397 | None:intergenic |
| TACAACCTAGAGCTGTGAAT+TGG | 0.353089 | 7.1:+49160646 | MS.gene011042:CDS |
| ATCAAGTGTTGAATTTGATA+TGG | 0.364286 | 7.1:-49161933 | None:intergenic |
| ACTACCTCGGTGATGTCTTC+AGG | 0.368209 | 7.1:-49161711 | None:intergenic |
| ACAAAAGCAAGGTTAAGATT+TGG | 0.376577 | 7.1:-49158223 | None:intergenic |
| TGAAACTATATATATGGCTT+TGG | 0.379514 | 7.1:-49159499 | None:intergenic |
| GTCCTTTCTTCAACAGCAGC+AGG | 0.382729 | 7.1:-49161881 | None:intergenic |
| GTAACCAAGTTGTGAAAATT+GGG | 0.383144 | 7.1:+49159059 | MS.gene011042:CDS |
| ACAACCTAGAGCTGTGAATT+GGG | 0.394703 | 7.1:+49160647 | MS.gene011042:CDS |
| CGCCTTTGGATTAATAGTCT+TGG | 0.397407 | 7.1:+49158437 | MS.gene011042:CDS |
| AAATTTCTCCTCCGATGTTA+AGG | 0.410735 | 7.1:+49157817 | MS.gene011042:CDS |
| ATGTCAAGATTGAAAGTTGT+AGG | 0.411126 | 7.1:+49155895 | MS.gene011042:CDS |
| CAGATGCAAGAACATTTAGA+AGG | 0.414961 | 7.1:-49158075 | None:intergenic |
| TTTCAGCGTCATTTGGTACT+TGG | 0.415263 | 7.1:+49157404 | MS.gene011042:intron |
| CTCAACTCTGCTAAAGCAAT+TGG | 0.419451 | 7.1:+49156993 | MS.gene011042:CDS |
| CTTGTGACAAAAGGAGTAAC+TGG | 0.423464 | 7.1:+49160672 | MS.gene011042:CDS |
| TGTCACATATGACGCCTTCT+CGG | 0.428560 | 7.1:-49156664 | None:intergenic |
| TCTTGAACATGCTGAAAAGA+TGG | 0.429194 | 7.1:+49158156 | MS.gene011042:CDS |
| CTTAACTGCAAGAGATATAG+TGG | 0.441515 | 7.1:+49158192 | MS.gene011042:CDS |
| TTATACTTGCTGTTAGTGTA+AGG | 0.443705 | 7.1:-49161838 | None:intergenic |
| AACTTGAGATTTCACTCTCA+TGG | 0.447009 | 7.1:+49159413 | MS.gene011042:CDS |
| ATATATCAACAATGTCTTTG+AGG | 0.451615 | 7.1:+49158469 | MS.gene011042:CDS |
| ATCAGTATTGCAAGAAAGCT+TGG | 0.454625 | 7.1:+49161669 | MS.gene011042:CDS |
| ACCCTGCTGCTGTTGAAGAA+AGG | 0.459663 | 7.1:+49161879 | MS.gene011042:CDS |
| GCTTCCTGAGTTTCTCACTT+TGG | 0.460272 | 7.1:-49159477 | None:intergenic |
| GGCACTCAAGACTTAATTGA+AGG | 0.463220 | 7.1:+49157035 | MS.gene011042:CDS |
| TGTTGAAGAAAGGACAAGTT+CGG | 0.477503 | 7.1:+49161889 | MS.gene011042:CDS |
| AAGCCATATATATAGTTTCA+AGG | 0.477750 | 7.1:+49159502 | MS.gene011042:CDS |
| TGATTCTGATATTCTGCAAT+GGG | 0.477771 | 7.1:+49159448 | MS.gene011042:CDS |
| ACTCTTGACAAGGTGTCACC+TGG | 0.480499 | 7.1:+49158971 | MS.gene011042:CDS |
| GCTGGTTGGTTGGGATAGTA+AGG | 0.490164 | 7.1:+49157621 | MS.gene011042:CDS |
| ACAATGTCTTTGAGGATGTC+CGG | 0.491002 | 7.1:+49158477 | MS.gene011042:CDS |
| TCTTTGAGGATGTCCGGAAC+GGG | 0.497277 | 7.1:+49158483 | MS.gene011042:CDS |
| ACTTGAGATTTCACTCTCAT+GGG | 0.506566 | 7.1:+49159414 | MS.gene011042:CDS |
| TCGAAGAGATCGTTGGTTGA+AGG | 0.509178 | 7.1:-49156744 | None:intergenic |
| TAACAGCAAGTATAATGTAT+TGG | 0.514555 | 7.1:+49161846 | MS.gene011042:CDS |
| TCTTGCAATACTGATAATGT+AGG | 0.518740 | 7.1:-49161661 | None:intergenic |
| CAGGATAAAAGTTTATCAGA+TGG | 0.519978 | 7.1:+49160594 | MS.gene011042:intron |
| CTCTAGGTTGTACAGAACTA+AGG | 0.521248 | 7.1:-49160635 | None:intergenic |
| ATCTTCCAATTAACAATCCC+AGG | 0.521674 | 7.1:-49158989 | None:intergenic |
| GAGAGTGGGAAGCTTACCAT+TGG | 0.523512 | 7.1:+49155856 | MS.gene011042:CDS |
| TTCCAAGACTATTAATCCAA+AGG | 0.523555 | 7.1:-49158439 | None:intergenic |
| TTAAATGGCATCTTTATAGG+AGG | 0.524199 | 7.1:-49159022 | None:intergenic |
| GCGCGTTCATCGATAGTTGT+CGG | 0.527996 | 7.1:-49156912 | None:intergenic |
| CTCAAGACTTAATTGAAGGA+AGG | 0.528851 | 7.1:+49157039 | MS.gene011042:CDS |
| CTGATTCTGATATTCTGCAA+TGG | 0.530863 | 7.1:+49159447 | MS.gene011042:CDS |
| TCCTTTCTTCAACAGCAGCA+GGG | 0.533065 | 7.1:-49161880 | None:intergenic |
| TGCGATTTCGAAGAGATCGT+TGG | 0.536044 | 7.1:-49156751 | None:intergenic |
| GTCTTTGAGGATGTCCGGAA+CGG | 0.551242 | 7.1:+49158482 | MS.gene011042:CDS |
| CAATTGCTTTAGCAGAGTTG+AGG | 0.565005 | 7.1:-49156992 | None:intergenic |
| TTGCAGTAAACTTATTAATG+TGG | 0.565860 | 7.1:+49156884 | MS.gene011042:intron |
| ATGATCATGAGGAGAGAGAG+TGG | 0.567935 | 7.1:+49155841 | MS.gene011042:CDS |
| GAGATTTCACTCTCATGGGA+AGG | 0.568367 | 7.1:+49159418 | MS.gene011042:CDS |
| CTTGAACATGCTGAAAAGAT+GGG | 0.573699 | 7.1:+49158157 | MS.gene011042:CDS |
| AACACCAAAGTGAGAAACTC+AGG | 0.580483 | 7.1:+49159473 | MS.gene011042:CDS |
| TCAAGACTTAATTGAAGGAA+GGG | 0.582324 | 7.1:+49157040 | MS.gene011042:CDS |
| AGACCCCAATTCACAGCTCT+AGG | 0.587212 | 7.1:-49160651 | None:intergenic |
| AATTGGGGTCTTGTGACAAA+AGG | 0.587266 | 7.1:+49160663 | MS.gene011042:CDS |
| CTCTTGACAAGGTGTCACCT+GGG | 0.592426 | 7.1:+49158972 | MS.gene011042:CDS |
| CACAATAAGTGAATCCGAGA+AGG | 0.597458 | 7.1:+49156650 | MS.gene011042:CDS |
| ATTTCCAGCAATATTTACCA+AGG | 0.600710 | 7.1:-49159098 | None:intergenic |
| CTCTTCGAAATCGCAAAAGA+CGG | 0.602850 | 7.1:+49156759 | MS.gene011042:CDS |
| ATACACTAATCCATCGACAT+TGG | 0.605677 | 7.1:+49158099 | MS.gene011042:CDS |
| GGATGTACCGTAGTCAACAT+TGG | 0.605781 | 7.1:+49157014 | MS.gene011042:CDS |
| TTGAGTGCCAATGTTGACTA+CGG | 0.609361 | 7.1:-49157021 | None:intergenic |
| GATTGCAGTTCATGATCATG+AGG | 0.611121 | 7.1:+49155830 | None:intergenic |
| CTTTGAAGACAAGTCTCCAA+TGG | 0.613064 | 7.1:-49155872 | None:intergenic |
| TGATCATGAGGAGAGAGAGT+GGG | 0.613913 | 7.1:+49155842 | MS.gene011042:CDS |
| AGATATGTGCAACAAAAGCA+AGG | 0.616970 | 7.1:-49158234 | None:intergenic |
| CAACCTAGAGCTGTGAATTG+GGG | 0.619563 | 7.1:+49160648 | MS.gene011042:CDS |
| AAACTCATCAGCATTCCTCA+AGG | 0.625349 | 7.1:+49156605 | MS.gene011042:CDS |
| CCAACCAGCTCCAAAAGTTG+AGG | 0.628409 | 7.1:-49157607 | None:intergenic |
| TTCGGATTGTGAGAGTCAAG+TGG | 0.633763 | 7.1:+49161907 | MS.gene011042:CDS |
| ACTGCAAGAGATATAGTGGA+AGG | 0.638405 | 7.1:+49158196 | MS.gene011042:CDS |
| TCGTTGGTTGAAGGATCAAG+AGG | 0.643960 | 7.1:-49156735 | None:intergenic |
| TGTGTGAAGCAATGTTGTAG+TGG | 0.648045 | 7.1:-49156631 | None:intergenic |
| TATCATCTAGCAATGAGTCA+AGG | 0.651529 | 7.1:-49158385 | None:intergenic |
| TACGGTTACCTTAACATCGG+AGG | 0.653281 | 7.1:-49157825 | None:intergenic |
| ATGTTGTAGTGGCAACCTTG+AGG | 0.654723 | 7.1:-49156620 | None:intergenic |
| GCTGGAAATGACATTGTGCA+AGG | 0.663800 | 7.1:+49159112 | MS.gene011042:CDS |
| ATGTACGGTTACCTTAACAT+CGG | 0.689189 | 7.1:-49157828 | None:intergenic |
| GCTACCTGAAGACATCACCG+AGG | 0.818577 | 7.1:+49161707 | MS.gene011042:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTATTAATTTATATAT+AGG | + | chr7.1:49161799-49161818 | MS.gene011042:intron | 0.0% |
| !! | AAATCTTATATATAAATGTA+AGG | - | chr7.1:49160304-49160323 | None:intergenic | 10.0% |
| !!! | AAAAAAATCTCTAAAAAATA+TGG | - | chr7.1:49160859-49160878 | None:intergenic | 10.0% |
| !!! | AAAAAATCTCTAAAAAATAT+GGG | - | chr7.1:49160858-49160877 | None:intergenic | 10.0% |
| !!! | ATCAATAATCTTTTATTTTT+TGG | + | chr7.1:49161239-49161258 | MS.gene011042:intron | 10.0% |
| !!! | ATTATTGATTTTTTTTTTTG+AGG | - | chr7.1:49161228-49161247 | None:intergenic | 10.0% |
| !!! | ATTTATCTTTAAAAAATGTA+CGG | - | chr7.1:49157846-49157865 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTTTATGTTTTAC+AGG | + | chr7.1:49158933-49158952 | MS.gene011042:intron | 10.0% |
| !!! | TTATTGATTTTTTTTTTTGA+GGG | - | chr7.1:49161227-49161246 | None:intergenic | 10.0% |
| !! | AAAAAGAAAACTAGTAAAAA+AGG | - | chr7.1:49156124-49156143 | None:intergenic | 15.0% |
| !! | AAAAAGTTATTACAAATGTA+TGG | - | chr7.1:49160484-49160503 | None:intergenic | 15.0% |
| !! | AAAGTTTACAAACTAATAAT+TGG | - | chr7.1:49159765-49159784 | None:intergenic | 15.0% |
| !! | AAATAAAAAATCAACCATAA+TGG | - | chr7.1:49159343-49159362 | None:intergenic | 15.0% |
| !! | CAATTTCAATATATATGATA+TGG | + | chr7.1:49156168-49156187 | MS.gene011042:intron | 15.0% |
| !! | CATATCATATATATTGAAAT+TGG | - | chr7.1:49156170-49156189 | None:intergenic | 15.0% |
| !! | GGATATAAAAAATTAATACT+AGG | + | chr7.1:49159133-49159152 | MS.gene011042:CDS | 15.0% |
| !! | GTTAAATTAGATACAATTAT+TGG | + | chr7.1:49157561-49157580 | MS.gene011042:intron | 15.0% |
| !! | TTCATGTTTATTAAAATAAC+AGG | + | chr7.1:49157700-49157719 | MS.gene011042:intron | 15.0% |
| !! | TTTATTAAAATAACAGGATA+TGG | + | chr7.1:49157706-49157725 | MS.gene011042:intron | 15.0% |
| !!! | AATTATTAGTTTGTAAACTT+TGG | + | chr7.1:49159764-49159783 | MS.gene011042:intron | 15.0% |
| !!! | TAAAAATTGTTTGAAATTTC+AGG | + | chr7.1:49160575-49160594 | MS.gene011042:intron | 15.0% |
| !!! | TTTTAATCATTCTTTCATTT+AGG | + | chr7.1:49158849-49158868 | MS.gene011042:intron | 15.0% |
| !!! | TTTTTATTCTTACATTTTGT+AGG | + | chr7.1:49157355-49157374 | MS.gene011042:intron | 15.0% |
| !!! | TTTTTATTTTAGCATATTTG+TGG | + | chr7.1:49159354-49159373 | MS.gene011042:intron | 15.0% |
| !! | AAAAAGATTACTTAATCCTT+GGG | + | chr7.1:49156944-49156963 | MS.gene011042:CDS | 20.0% |
| !! | AAATAAAGAATCAAAAGTTG+TGG | - | chr7.1:49160803-49160822 | None:intergenic | 20.0% |
| !! | ACAGTTTAATTATCTTGAAA+CGG | - | chr7.1:49157949-49157968 | None:intergenic | 20.0% |
| !! | ATAAGAAACTTTGATACAAA+TGG | + | chr7.1:49160143-49160162 | MS.gene011042:intron | 20.0% |
| !! | ATACCTTGAAACTATATATA+TGG | - | chr7.1:49159508-49159527 | None:intergenic | 20.0% |
| !! | ATATGAAAAGATAAAAGTGA+AGG | - | chr7.1:49157654-49157673 | None:intergenic | 20.0% |
| !! | ATTATTATTATCACCTGATT+TGG | - | chr7.1:49158261-49158280 | None:intergenic | 20.0% |
| !! | ATTTGAGTGATATCAAATAA+TGG | + | chr7.1:49156505-49156524 | MS.gene011042:intron | 20.0% |
| !! | CAAATTTAAACCAAATATGA+AGG | - | chr7.1:49161614-49161633 | None:intergenic | 20.0% |
| !! | CCATGATTTATCAAATTAAA+CGG | + | chr7.1:49161588-49161607 | MS.gene011042:intron | 20.0% |
| !! | CTAATGAAGTAAGATAATTA+CGG | + | chr7.1:49159718-49159737 | MS.gene011042:intron | 20.0% |
| !! | GTAAGAATAAAAATAGAGAA+GGG | - | chr7.1:49157348-49157367 | None:intergenic | 20.0% |
| !! | TAAAAAAAGAATCTGGAAAA+AGG | - | chr7.1:49160737-49160756 | None:intergenic | 20.0% |
| !! | TGAACATAAATTTGAAAACA+TGG | + | chr7.1:49161553-49161572 | MS.gene011042:intron | 20.0% |
| !! | TGTAAGAATAAAAATAGAGA+AGG | - | chr7.1:49157349-49157368 | None:intergenic | 20.0% |
| !!! | AAATCATTGTTTTCTTATCT+AGG | + | chr7.1:49160042-49160061 | MS.gene011042:intron | 20.0% |
| !!! | AGTTTTGTTCAAAAATACTA+TGG | - | chr7.1:49158636-49158655 | None:intergenic | 20.0% |
| !!! | ATAGAGTATAACTTTTAACA+CGG | - | chr7.1:49157071-49157090 | None:intergenic | 20.0% |
| !!! | ATCAAACACTTAAATTTTGA+TGG | - | chr7.1:49156487-49156506 | None:intergenic | 20.0% |
| !!! | CAATTCTCTACTTTTTTAAA+TGG | - | chr7.1:49159040-49159059 | None:intergenic | 20.0% |
| !!! | CTATATAGTTTTTTTTGAAG+AGG | + | chr7.1:49157887-49157906 | MS.gene011042:intron | 20.0% |
| !!! | GTATTATTTGTGTCTTATTT+TGG | + | chr7.1:49161124-49161143 | MS.gene011042:intron | 20.0% |
| !!! | TATATTCTGTTTTCTTCAAA+TGG | - | chr7.1:49157784-49157803 | None:intergenic | 20.0% |
| !!! | TGATTTTGAATTGTTTCTAA+AGG | + | chr7.1:49155987-49156006 | MS.gene011042:CDS | 20.0% |
| !!! | TTTTGTTAGAATAGTGATTA+TGG | - | chr7.1:49158794-49158813 | None:intergenic | 20.0% |
| !!! | TTTTTAAATGGCATCTTTAT+AGG | - | chr7.1:49159028-49159047 | None:intergenic | 20.0% |
| !!! | TTTTTTTATGTTTTACAGGT+GGG | + | chr7.1:49158937-49158956 | MS.gene011042:intron | 20.0% |
| !!! | TTTTTTTTATGTTTTACAGG+TGG | + | chr7.1:49158936-49158955 | MS.gene011042:intron | 20.0% |
| ! | AAATGTTTCCATAAAAATGC+TGG | - | chr7.1:49156844-49156863 | None:intergenic | 25.0% |
| ! | AAGCCATATATATAGTTTCA+AGG | + | chr7.1:49159502-49159521 | MS.gene011042:CDS | 25.0% |
| ! | AATGAATAAGATTAAGAGCT+AGG | - | chr7.1:49159607-49159626 | None:intergenic | 25.0% |
| ! | ACAATAAGGGAATTAACATT+TGG | + | chr7.1:49156418-49156437 | MS.gene011042:intron | 25.0% |
| ! | ATATATCAACAATGTCTTTG+AGG | + | chr7.1:49158469-49158488 | MS.gene011042:CDS | 25.0% |
| ! | ATCAACATATATGATTCTTG+TGG | + | chr7.1:49158024-49158043 | MS.gene011042:intron | 25.0% |
| ! | ATCAATCCTAAGAAAATGTA+AGG | - | chr7.1:49157283-49157302 | None:intergenic | 25.0% |
| ! | ATTAGATCAGAATTACCAAA+AGG | - | chr7.1:49156085-49156104 | None:intergenic | 25.0% |
| ! | CAAAAAGATTACTTAATCCT+TGG | + | chr7.1:49156943-49156962 | MS.gene011042:CDS | 25.0% |
| ! | CAAGTTTATAAAAGCTATCA+TGG | + | chr7.1:49161097-49161116 | MS.gene011042:intron | 25.0% |
| ! | CAATTAAGAATCTGATGTAA+AGG | + | chr7.1:49159555-49159574 | MS.gene011042:intron | 25.0% |
| ! | CACATTTCATATGTTAACAA+AGG | - | chr7.1:49158302-49158321 | None:intergenic | 25.0% |
| ! | CCTTACAGTTATGAAAATAA+AGG | - | chr7.1:49161526-49161545 | None:intergenic | 25.0% |
| ! | CTAGTAAAAAAGGTAATTTG+TGG | - | chr7.1:49156114-49156133 | None:intergenic | 25.0% |
| ! | CTTTACATCAGATTCTTAAT+TGG | - | chr7.1:49159557-49159576 | None:intergenic | 25.0% |
| ! | GATAAATGTAGAAGAAAACA+AGG | - | chr7.1:49158757-49158776 | None:intergenic | 25.0% |
| ! | GTACACATAAAAAAAGAATC+TGG | - | chr7.1:49160744-49160763 | None:intergenic | 25.0% |
| ! | TAACAGCAAGTATAATGTAT+TGG | + | chr7.1:49161846-49161865 | MS.gene011042:CDS | 25.0% |
| ! | TAACATTGTCTAAACCATTA+TGG | + | chr7.1:49159326-49159345 | MS.gene011042:intron | 25.0% |
| ! | TCAAAGATTCAACAAGTAAA+AGG | - | chr7.1:49160706-49160725 | None:intergenic | 25.0% |
| ! | TCGCAATTCTATATACATAA+AGG | - | chr7.1:49159956-49159975 | None:intergenic | 25.0% |
| ! | TGAAACTATATATATGGCTT+TGG | - | chr7.1:49159502-49159521 | None:intergenic | 25.0% |
| ! | TGATTGTTGGATATCATTAA+TGG | + | chr7.1:49160173-49160192 | MS.gene011042:intron | 25.0% |
| ! | TGTATATAGAATTGCGATAA+AGG | + | chr7.1:49159959-49159978 | MS.gene011042:intron | 25.0% |
| ! | TGTCAGTTGTAAAGAAAAAA+TGG | - | chr7.1:49156399-49156418 | None:intergenic | 25.0% |
| ! | TTCTATCATGCAAAGAATTA+GGG | - | chr7.1:49158672-49158691 | None:intergenic | 25.0% |
| ! | TTGCAGTAAACTTATTAATG+TGG | + | chr7.1:49156884-49156903 | MS.gene011042:intron | 25.0% |
| ! | TTTAATTATCTTGAAACGGA+GGG | - | chr7.1:49157945-49157964 | None:intergenic | 25.0% |
| ! | TTTCTATCATGCAAAGAATT+AGG | - | chr7.1:49158673-49158692 | None:intergenic | 25.0% |
| !! | AGGCTAACAAAATCTTTTTA+TGG | + | chr7.1:49160062-49160081 | MS.gene011042:intron | 25.0% |
| !! | CTTTTATGATACTTACTTTG+TGG | + | chr7.1:49161746-49161765 | MS.gene011042:intron | 25.0% |
| !! | TAATTCAAGTTCTTTGTAAC+AGG | + | chr7.1:49158327-49158346 | MS.gene011042:intron | 25.0% |
| !! | TACTTACTTTGTGGTTTTTA+TGG | + | chr7.1:49161755-49161774 | MS.gene011042:intron | 25.0% |
| !! | TATTCTTACATTTTGTAGGT+TGG | + | chr7.1:49157359-49157378 | MS.gene011042:intron | 25.0% |
| !!! | ATCAAGTGTTGAATTTGATA+TGG | - | chr7.1:49161936-49161955 | None:intergenic | 25.0% |
| !!! | ATCAGATGGAATATTTTTTC+TGG | + | chr7.1:49160608-49160627 | MS.gene011042:CDS | 25.0% |
| !!! | ATTTTGTTGTTTGTTTCATG+TGG | - | chr7.1:49161498-49161517 | None:intergenic | 25.0% |
| !!! | CCGTTTAATTTGATAAATCA+TGG | - | chr7.1:49161591-49161610 | None:intergenic | 25.0% |
| !!! | CCTTTATTTTCATAACTGTA+AGG | + | chr7.1:49161523-49161542 | MS.gene011042:intron | 25.0% |
| !!! | GACTTTTCATCAATTTGTTA+TGG | - | chr7.1:49161054-49161073 | None:intergenic | 25.0% |
| !!! | GCATTTTAGTAAAAAAACCA+TGG | + | chr7.1:49160239-49160258 | MS.gene011042:intron | 25.0% |
| !!! | TAAATTTTGATGGTTTCTCA+TGG | - | chr7.1:49156477-49156496 | None:intergenic | 25.0% |
| !!! | TATTGGTTCTTTTTTCCTTT+TGG | + | chr7.1:49156067-49156086 | MS.gene011042:intron | 25.0% |
| !!! | TTATTTTGGTTGTGATACAT+GGG | + | chr7.1:49161138-49161157 | MS.gene011042:intron | 25.0% |
| !!! | TTGAATTTGAACTGTTTTTG+TGG | + | chr7.1:49158552-49158571 | MS.gene011042:intron | 25.0% |
| !!! | TTGATTTTTTTTTTTGAGGG+AGG | - | chr7.1:49161224-49161243 | None:intergenic | 25.0% |
| !!! | TTTTTTGGTAACCATGATAT+TGG | + | chr7.1:49161254-49161273 | MS.gene011042:intron | 25.0% |
| AAACTTTGATACAAATGGCA+TGG | + | chr7.1:49160148-49160167 | MS.gene011042:intron | 30.0% | |
| AAAGAATCAAAAGTTGTGGA+GGG | - | chr7.1:49160799-49160818 | None:intergenic | 30.0% | |
| AACCAATACACTTAAAAAGC+TGG | - | chr7.1:49156055-49156074 | None:intergenic | 30.0% | |
| AATACTTTGCACCAATATCA+TGG | - | chr7.1:49161268-49161287 | None:intergenic | 30.0% | |
| AATCATGAAATTCTCTCAAG+TGG | + | chr7.1:49161451-49161470 | MS.gene011042:intron | 30.0% | |
| AATTAAACGGCCTTCATATT+TGG | + | chr7.1:49161601-49161620 | MS.gene011042:intron | 30.0% | |
| ACAAAAGCAAGGTTAAGATT+TGG | - | chr7.1:49158226-49158245 | None:intergenic | 30.0% | |
| ACAATTGATTGTAACCTTGT+CGG | - | chr7.1:49159236-49159255 | None:intergenic | 30.0% | |
| ACACTTACACTTCAAATTGA+AGG | - | chr7.1:49156333-49156352 | None:intergenic | 30.0% | |
| ATCATGAAATTCTCTCAAGT+GGG | + | chr7.1:49161452-49161471 | MS.gene011042:intron | 30.0% | |
| ATCGGAAACATAGTCATAAT+TGG | + | chr7.1:49158713-49158732 | MS.gene011042:intron | 30.0% | |
| ATGTCAAGATTGAAAGTTGT+AGG | + | chr7.1:49155895-49155914 | MS.gene011042:CDS | 30.0% | |
| ATTTCCAGCAATATTTACCA+AGG | - | chr7.1:49159101-49159120 | None:intergenic | 30.0% | |
| CAGAAAAAATCTTGTTGAGA+TGG | + | chr7.1:49157750-49157769 | MS.gene011042:CDS | 30.0% | |
| CAGGATAAAAGTTTATCAGA+TGG | + | chr7.1:49160594-49160613 | MS.gene011042:intron | 30.0% | |
| CTATATACATAAAGGCTACA+TGG | - | chr7.1:49159948-49159967 | None:intergenic | 30.0% | |
| CTTTACAACTGACACAATAA+GGG | + | chr7.1:49156405-49156424 | MS.gene011042:intron | 30.0% | |
| GTAACCAAGTTGTGAAAATT+GGG | + | chr7.1:49159059-49159078 | MS.gene011042:CDS | 30.0% | |
| GTTAACACCTTATGAAACTA+AGG | - | chr7.1:49159310-49159329 | None:intergenic | 30.0% | |
| GTTTAATTATCTTGAAACGG+AGG | - | chr7.1:49157946-49157965 | None:intergenic | 30.0% | |
| TAAAGAATCAAAAGTTGTGG+AGG | - | chr7.1:49160800-49160819 | None:intergenic | 30.0% | |
| TATCCACTTGTATGTATTCA+GGG | + | chr7.1:49160526-49160545 | MS.gene011042:intron | 30.0% | |
| TCAAGACTTAATTGAAGGAA+GGG | + | chr7.1:49157040-49157059 | MS.gene011042:CDS | 30.0% | |
| TCTGATCTCACAGATTATTA+AGG | + | chr7.1:49157427-49157446 | MS.gene011042:CDS | 30.0% | |
| TCTTTACAACTGACACAATA+AGG | + | chr7.1:49156404-49156423 | MS.gene011042:intron | 30.0% | |
| TGATTCTGATATTCTGCAAT+GGG | + | chr7.1:49159448-49159467 | MS.gene011042:CDS | 30.0% | |
| TGTAACCAAGTTGTGAAAAT+TGG | + | chr7.1:49159058-49159077 | MS.gene011042:CDS | 30.0% | |
| TGTATGTATTCAGGGATTAA+AGG | + | chr7.1:49160534-49160553 | MS.gene011042:intron | 30.0% | |
| TGTTGTCACTCTATACATAA+AGG | - | chr7.1:49160022-49160041 | None:intergenic | 30.0% | |
| TTAAATGGCATCTTTATAGG+AGG | - | chr7.1:49159025-49159044 | None:intergenic | 30.0% | |
| TTAAGAGCTAGGTAAACTAA+TGG | - | chr7.1:49159596-49159615 | None:intergenic | 30.0% | |
| TTATCCACTTGTATGTATTC+AGG | + | chr7.1:49160525-49160544 | MS.gene011042:intron | 30.0% | |
| TTCCAAGACTATTAATCCAA+AGG | - | chr7.1:49158442-49158461 | None:intergenic | 30.0% | |
| TTGGTTTAAATTTGCAGATC+AGG | + | chr7.1:49161620-49161639 | MS.gene011042:intron | 30.0% | |
| ! | AAAGAAAACTCCTCAACTTT+TGG | + | chr7.1:49157597-49157616 | MS.gene011042:CDS | 30.0% |
| ! | AAAGTTGAGGAGTTTTCTTT+AGG | - | chr7.1:49157597-49157616 | None:intergenic | 30.0% |
| ! | GAAACAACTTAAGTTTTCCT+TGG | + | chr7.1:49159081-49159100 | MS.gene011042:CDS | 30.0% |
| ! | GCTTTTCCTTACATTTTCTT+AGG | + | chr7.1:49157274-49157293 | MS.gene011042:intron | 30.0% |
| ! | GTTGCTATATAATTGATGAC+AGG | + | chr7.1:49156527-49156546 | MS.gene011042:intron | 30.0% |
| ! | TACTTGTTGAATCTTTGACT+TGG | + | chr7.1:49160708-49160727 | MS.gene011042:intron | 30.0% |
| ! | TCAAGTTCTTTAGAAGTTGT+AGG | - | chr7.1:49159400-49159419 | None:intergenic | 30.0% |
| ! | TCATTATGCCAGCATTTTTA+TGG | + | chr7.1:49156833-49156852 | MS.gene011042:intron | 30.0% |
| ! | TCTTGCAATACTGATAATGT+AGG | - | chr7.1:49161664-49161683 | None:intergenic | 30.0% |
| ! | TGATTTTCATTTCTTTCCCA+AGG | - | chr7.1:49156963-49156982 | None:intergenic | 30.0% |
| ! | TGCATGATAGAAAAGTATAG+CGG | + | chr7.1:49158680-49158699 | MS.gene011042:intron | 30.0% |
| ! | TTTTCCTTGGTAAATATTGC+TGG | + | chr7.1:49159094-49159113 | MS.gene011042:CDS | 30.0% |
| !! | AAAGAGCAAGCTGTTTTAAA+TGG | - | chr7.1:49160981-49161000 | None:intergenic | 30.0% |
| !! | AACTTTGGTGTTAAACTCAT+AGG | + | chr7.1:49159779-49159798 | MS.gene011042:intron | 30.0% |
| !! | TTATACTTGCTGTTAGTGTA+AGG | - | chr7.1:49161841-49161860 | None:intergenic | 30.0% |
| !!! | ACTAGTTTTGCTCTTTCAAA+CGG | - | chr7.1:49158136-49158155 | None:intergenic | 30.0% |
| !!! | AGAAAGCATCAAGTGTTTTA+AGG | - | chr7.1:49156454-49156473 | None:intergenic | 30.0% |
| !!! | CATCTCAACAAGATTTTTTC+TGG | - | chr7.1:49157752-49157771 | None:intergenic | 30.0% |
| !!! | CTTATTTTGGTTGTGATACA+TGG | + | chr7.1:49161137-49161156 | MS.gene011042:intron | 30.0% |
| !!! | GTTTTAATTTCAGCGTCATT+TGG | + | chr7.1:49157397-49157416 | MS.gene011042:intron | 30.0% |
| !!! | TGCAAAGTATTCATCGATTT+TGG | + | chr7.1:49161277-49161296 | MS.gene011042:intron | 30.0% |
| AAATGGCATGGTTTGATTGT+TGG | + | chr7.1:49160160-49160179 | MS.gene011042:intron | 35.0% | |
| AAATTTCTCCTCCGATGTTA+AGG | + | chr7.1:49157817-49157836 | MS.gene011042:CDS | 35.0% | |
| AACTTGAGATTTCACTCTCA+TGG | + | chr7.1:49159413-49159432 | MS.gene011042:CDS | 35.0% | |
| AATCCCTGAATACATACAAG+TGG | - | chr7.1:49160532-49160551 | None:intergenic | 35.0% | |
| ACTTGAGATTTCACTCTCAT+GGG | + | chr7.1:49159414-49159433 | MS.gene011042:CDS | 35.0% | |
| AGATATGTGCAACAAAAGCA+AGG | - | chr7.1:49158237-49158256 | None:intergenic | 35.0% | |
| ATACACTAATCCATCGACAT+TGG | + | chr7.1:49158099-49158118 | MS.gene011042:CDS | 35.0% | |
| ATCAGTATTGCAAGAAAGCT+TGG | + | chr7.1:49161669-49161688 | MS.gene011042:CDS | 35.0% | |
| ATCTTCCAATTAACAATCCC+AGG | - | chr7.1:49158992-49159011 | None:intergenic | 35.0% | |
| ATGTACGGTTACCTTAACAT+CGG | - | chr7.1:49157831-49157850 | None:intergenic | 35.0% | |
| CAAGTTCTTTGTAACAGGAA+TGG | + | chr7.1:49158332-49158351 | MS.gene011042:intron | 35.0% | |
| CAGATGCAAGAACATTTAGA+AGG | - | chr7.1:49158078-49158097 | None:intergenic | 35.0% | |
| CTCAAGACTTAATTGAAGGA+AGG | + | chr7.1:49157039-49157058 | MS.gene011042:CDS | 35.0% | |
| CTGATTCTGATATTCTGCAA+TGG | + | chr7.1:49159447-49159466 | MS.gene011042:CDS | 35.0% | |
| CTTAACTGCAAGAGATATAG+TGG | + | chr7.1:49158192-49158211 | MS.gene011042:CDS | 35.0% | |
| CTTGAACATGCTGAAAAGAT+GGG | + | chr7.1:49158157-49158176 | MS.gene011042:CDS | 35.0% | |
| GTAAACCCTAGAAAAACTCT+AGG | - | chr7.1:49160270-49160289 | None:intergenic | 35.0% | |
| TATCATCTAGCAATGAGTCA+AGG | - | chr7.1:49158388-49158407 | None:intergenic | 35.0% | |
| TATGATTCTTGTGGCATTGT+AGG | + | chr7.1:49158033-49158052 | MS.gene011042:intron | 35.0% | |
| TCACGAGTAAACTTGTAAAC+TGG | + | chr7.1:49158609-49158628 | MS.gene011042:intron | 35.0% | |
| TCAGTCTGAAAATCATGTGA+TGG | - | chr7.1:49160766-49160785 | None:intergenic | 35.0% | |
| TCATGAAATTCTCTCAAGTG+GGG | + | chr7.1:49161453-49161472 | MS.gene011042:intron | 35.0% | |
| TCTTGAACATGCTGAAAAGA+TGG | + | chr7.1:49158156-49158175 | MS.gene011042:CDS | 35.0% | |
| TGTTGAAGAAAGGACAAGTT+CGG | + | chr7.1:49161889-49161908 | MS.gene011042:CDS | 35.0% | |
| TTACTAAAATGCCCCCATAT+GGG | - | chr7.1:49160231-49160250 | None:intergenic | 35.0% | |
| TTGAAGTGTAAGTGTTTCGT+AGG | + | chr7.1:49156338-49156357 | MS.gene011042:intron | 35.0% | |
| TTGCACATATCTTCCAAATC+AGG | + | chr7.1:49158245-49158264 | MS.gene011042:CDS | 35.0% | |
| TTTACTAAAATGCCCCCATA+TGG | - | chr7.1:49160232-49160251 | None:intergenic | 35.0% | |
| ! | ACAGTTAGAATCTGAAGCAA+AGG | - | chr7.1:49161025-49161044 | None:intergenic | 35.0% |
| ! | CCAAACCTAGAGTTTTTCTA+GGG | + | chr7.1:49160262-49160281 | MS.gene011042:intron | 35.0% |
| ! | GGTGATGACTGATTTCTAAA+AGG | + | chr7.1:49161298-49161317 | MS.gene011042:intron | 35.0% |
| ! | GTTTCCCAATTTTCACAACT+TGG | - | chr7.1:49159066-49159085 | None:intergenic | 35.0% |
| ! | TTTCGATATTTTACCCGTTC+CGG | - | chr7.1:49158499-49158518 | None:intergenic | 35.0% |
| !! | ACTTCAACCAAAGCTTTAGA+AGG | - | chr7.1:49161397-49161416 | None:intergenic | 35.0% |
| !! | TTTGGTGTTAAACTCATAGG+CGG | + | chr7.1:49159782-49159801 | MS.gene011042:intron | 35.0% |
| !!! | ACTTTTGCAAGTTCTAGAAC+AGG | + | chr7.1:49156567-49156586 | MS.gene011042:CDS | 35.0% |
| !!! | AGCCAGCTTTTTAAGTGTAT+TGG | + | chr7.1:49156050-49156069 | MS.gene011042:intron | 35.0% |
| !!! | CATGTTGTGACTTTTTTACG+CGG | + | chr7.1:49157252-49157271 | MS.gene011042:intron | 35.0% |
| !!! | CTCAACAAGATTTTTTCTGG+TGG | - | chr7.1:49157749-49157768 | None:intergenic | 35.0% |
| !!! | TAAAAAGCTGGCTTTTTGCA+AGG | - | chr7.1:49156043-49156062 | None:intergenic | 35.0% |
| !!! | TTGCATTTTGAAGCCCATAT+GGG | + | chr7.1:49160215-49160234 | MS.gene011042:intron | 35.0% |
| AAAAACTCTAGGTTTGGCCA+TGG | - | chr7.1:49160259-49160278 | None:intergenic | 40.0% | |
| AAACTCATCAGCATTCCTCA+AGG | + | chr7.1:49156605-49156624 | MS.gene011042:CDS | 40.0% | |
| AACACCAAAGTGAGAAACTC+AGG | + | chr7.1:49159473-49159492 | MS.gene011042:CDS | 40.0% | |
| AAGTCACAACATGTGTGTTG+AGG | - | chr7.1:49157245-49157264 | None:intergenic | 40.0% | |
| ACAACCTAGAGCTGTGAATT+GGG | + | chr7.1:49160647-49160666 | MS.gene011042:CDS | 40.0% | |
| CAAAAGACGGTGTTCTTCTT+TGG | + | chr7.1:49156772-49156791 | MS.gene011042:CDS | 40.0% | |
| CAATTGCTTTAGCAGAGTTG+AGG | - | chr7.1:49156995-49157014 | None:intergenic | 40.0% | |
| CACAATAAGTGAATCCGAGA+AGG | + | chr7.1:49156650-49156669 | MS.gene011042:CDS | 40.0% | |
| CATATGGGCTTCAAAATGCA+AGG | - | chr7.1:49160216-49160235 | None:intergenic | 40.0% | |
| CCCTAGAAAAACTCTAGGTT+TGG | - | chr7.1:49160265-49160284 | None:intergenic | 40.0% | |
| CGCCTTTGGATTAATAGTCT+TGG | + | chr7.1:49158437-49158456 | MS.gene011042:CDS | 40.0% | |
| CTAGTAGTGACGTGTTTAAG+CGG | - | chr7.1:49161355-49161374 | None:intergenic | 40.0% | |
| CTCAACTCTGCTAAAGCAAT+TGG | + | chr7.1:49156993-49157012 | MS.gene011042:CDS | 40.0% | |
| CTCTAGGTTGTACAGAACTA+AGG | - | chr7.1:49160638-49160657 | None:intergenic | 40.0% | |
| CTCTTCGAAATCGCAAAAGA+CGG | + | chr7.1:49156759-49156778 | MS.gene011042:CDS | 40.0% | |
| CTTCACACTAAAGTCGTGTA+TGG | + | chr7.1:49159184-49159203 | MS.gene011042:intron | 40.0% | |
| CTTGTGACAAAAGGAGTAAC+TGG | + | chr7.1:49160672-49160691 | MS.gene011042:CDS | 40.0% | |
| GCTCATATTCGCTTACAAGT+GGG | + | chr7.1:49158574-49158593 | MS.gene011042:intron | 40.0% | |
| GGCACTCAAGACTTAATTGA+AGG | + | chr7.1:49157035-49157054 | MS.gene011042:CDS | 40.0% | |
| GTTTCCACTTTGAACTACCT+CGG | - | chr7.1:49161727-49161746 | None:intergenic | 40.0% | |
| GTTTGGGCCTTAGTTTCATA+AGG | + | chr7.1:49159300-49159319 | MS.gene011042:intron | 40.0% | |
| TACAACCTAGAGCTGTGAAT+TGG | + | chr7.1:49160646-49160665 | MS.gene011042:CDS | 40.0% | |
| TAGTAGTGACGTGTTTAAGC+GGG | - | chr7.1:49161354-49161373 | None:intergenic | 40.0% | |
| TGTCACCTGGGATTGTTAAT+TGG | + | chr7.1:49158984-49159003 | MS.gene011042:CDS | 40.0% | |
| TGTCTGACACAAACACATGT+CGG | - | chr7.1:49159213-49159232 | None:intergenic | 40.0% | |
| TGTGTGAAGCAATGTTGTAG+TGG | - | chr7.1:49156634-49156653 | None:intergenic | 40.0% | |
| TTGAGTGTAACTACATGTGC+CGG | + | chr7.1:49156290-49156309 | MS.gene011042:intron | 40.0% | |
| TTTCAGCGTCATTTGGTACT+TGG | + | chr7.1:49157404-49157423 | MS.gene011042:intron | 40.0% | |
| ! | AAGAGAGAGTTTTTCGCCTT+TGG | + | chr7.1:49158423-49158442 | MS.gene011042:CDS | 40.0% |
| ! | AATTGGGGTCTTGTGACAAA+AGG | + | chr7.1:49160663-49160682 | MS.gene011042:CDS | 40.0% |
| ! | ACAATGTCTTTGAGGATGTC+CGG | + | chr7.1:49158477-49158496 | MS.gene011042:CDS | 40.0% |
| ! | ACTGCAAGAGATATAGTGGA+AGG | + | chr7.1:49158196-49158215 | MS.gene011042:CDS | 40.0% |
| ! | CTTTGAAGACAAGTCTCCAA+TGG | - | chr7.1:49155875-49155894 | None:intergenic | 40.0% |
| ! | GCCAAACCTAGAGTTTTTCT+AGG | + | chr7.1:49160261-49160280 | MS.gene011042:intron | 40.0% |
| ! | TATAGCGGCTACTTTGCTAT+CGG | + | chr7.1:49158695-49158714 | MS.gene011042:intron | 40.0% |
| ! | TGATCGATTGTAGTTTGTCG+TGG | - | chr7.1:49160345-49160364 | None:intergenic | 40.0% |
| ! | TTGAGTGCCAATGTTGACTA+CGG | - | chr7.1:49157024-49157043 | None:intergenic | 40.0% |
| ! | TTTTTCACAGCCAATGTCGA+TGG | - | chr7.1:49158112-49158131 | None:intergenic | 40.0% |
| !! | GAGCTTTCCTTCTAAAGCTT+TGG | + | chr7.1:49161387-49161406 | MS.gene011042:intron | 40.0% |
| !! | GCTTTTAGAGACTCTTGACA+AGG | + | chr7.1:49158961-49158980 | MS.gene011042:CDS | 40.0% |
| !!! | CTTGCATTTTGAAGCCCATA+TGG | + | chr7.1:49160214-49160233 | MS.gene011042:intron | 40.0% |
| !!! | TGCATTTTGAAGCCCATATG+GGG | + | chr7.1:49160216-49160235 | MS.gene011042:intron | 40.0% |
| AGTAGTGACGTGTTTAAGCG+GGG | - | chr7.1:49161353-49161372 | None:intergenic | 45.0% | |
| ATCACCGAGGTAGTTCAAAG+TGG | + | chr7.1:49161720-49161739 | MS.gene011042:intron | 45.0% | |
| ATGATCATGAGGAGAGAGAG+TGG | + | chr7.1:49155841-49155860 | MS.gene011042:CDS | 45.0% | |
| ATGTTGTAGTGGCAACCTTG+AGG | - | chr7.1:49156623-49156642 | None:intergenic | 45.0% | |
| CAACCTAGAGCTGTGAATTG+GGG | + | chr7.1:49160648-49160667 | MS.gene011042:CDS | 45.0% | |
| CAAGGATCGATCACGATGTT+TGG | - | chr7.1:49158739-49158758 | None:intergenic | 45.0% | |
| CGCTTAAACACGTCACTACT+AGG | + | chr7.1:49161353-49161372 | MS.gene011042:intron | 45.0% | |
| GACGTGTCAATGTCGTGTTT+GGG | + | chr7.1:49159284-49159303 | MS.gene011042:intron | 45.0% | |
| GAGATTTCACTCTCATGGGA+AGG | + | chr7.1:49159418-49159437 | MS.gene011042:CDS | 45.0% | |
| GCTGGAAATGACATTGTGCA+AGG | + | chr7.1:49159112-49159131 | MS.gene011042:CDS | 45.0% | |
| GCTTCCTGAGTTTCTCACTT+TGG | - | chr7.1:49159480-49159499 | None:intergenic | 45.0% | |
| GGATGTACCGTAGTCAACAT+TGG | + | chr7.1:49157014-49157033 | MS.gene011042:CDS | 45.0% | |
| GGCTCATATTCGCTTACAAG+TGG | + | chr7.1:49158573-49158592 | MS.gene011042:intron | 45.0% | |
| TACGGTTACCTTAACATCGG+AGG | - | chr7.1:49157828-49157847 | None:intergenic | 45.0% | |
| TCCTTTCTTCAACAGCAGCA+GGG | - | chr7.1:49161883-49161902 | None:intergenic | 45.0% | |
| TGATCATGAGGAGAGAGAGT+GGG | + | chr7.1:49155842-49155861 | MS.gene011042:CDS | 45.0% | |
| TGCGATTTCGAAGAGATCGT+TGG | - | chr7.1:49156754-49156773 | None:intergenic | 45.0% | |
| TGTCACATATGACGCCTTCT+CGG | - | chr7.1:49156667-49156686 | None:intergenic | 45.0% | |
| TTCGGATTGTGAGAGTCAAG+TGG | + | chr7.1:49161907-49161926 | MS.gene011042:CDS | 45.0% | |
| ! | TCGAAGAGATCGTTGGTTGA+AGG | - | chr7.1:49156747-49156766 | None:intergenic | 45.0% |
| ! | TCGTTGGTTGAAGGATCAAG+AGG | - | chr7.1:49156738-49156757 | None:intergenic | 45.0% |
| !! | AGAACCATGAAGCACTGACT+CGG | + | chr7.1:49156216-49156235 | MS.gene011042:intron | 45.0% |
| !!! | AACTCCTCAACTTTTGGAGC+TGG | + | chr7.1:49157603-49157622 | MS.gene011042:CDS | 45.0% |
| !!! | AACTTTTGGAGCTGGTTGGT+TGG | + | chr7.1:49157611-49157630 | MS.gene011042:CDS | 45.0% |
| !!! | ACTTTTGGAGCTGGTTGGTT+GGG | + | chr7.1:49157612-49157631 | MS.gene011042:CDS | 45.0% |
| !!! | GCATTTTGAAGCCCATATGG+GGG | + | chr7.1:49160217-49160236 | MS.gene011042:intron | 45.0% |
| ACCCTGCTGCTGTTGAAGAA+AGG | + | chr7.1:49161879-49161898 | MS.gene011042:CDS | 50.0% | |
| ACTACCTCGGTGATGTCTTC+AGG | - | chr7.1:49161714-49161733 | None:intergenic | 50.0% | |
| AGACCCCAATTCACAGCTCT+AGG | - | chr7.1:49160654-49160673 | None:intergenic | 50.0% | |
| ATGTCCGAGTCAGTGCTTCA+TGG | - | chr7.1:49156223-49156242 | None:intergenic | 50.0% | |
| CCAACCAGCTCCAAAAGTTG+AGG | - | chr7.1:49157610-49157629 | None:intergenic | 50.0% | |
| CGACGTGTCAATGTCGTGTT+TGG | + | chr7.1:49159283-49159302 | MS.gene011042:intron | 50.0% | |
| CGGGGAGACACGAGTAAATA+TGG | - | chr7.1:49161335-49161354 | None:intergenic | 50.0% | |
| CGTCACTACTAGGCTCGAAT+CGG | + | chr7.1:49161363-49161382 | MS.gene011042:intron | 50.0% | |
| GAGAGTGGGAAGCTTACCAT+TGG | + | chr7.1:49155856-49155875 | MS.gene011042:CDS | 50.0% | |
| GCGCGTTCATCGATAGTTGT+CGG | - | chr7.1:49156915-49156934 | None:intergenic | 50.0% | |
| GTCCTTTCTTCAACAGCAGC+AGG | - | chr7.1:49161884-49161903 | None:intergenic | 50.0% | |
| GTTTGTGTCAGACACCGACA+AGG | + | chr7.1:49159219-49159238 | MS.gene011042:intron | 50.0% | |
| ! | ACTCTTGACAAGGTGTCACC+TGG | + | chr7.1:49158971-49158990 | MS.gene011042:CDS | 50.0% |
| ! | CTCTTGACAAGGTGTCACCT+GGG | + | chr7.1:49158972-49158991 | MS.gene011042:CDS | 50.0% |
| ! | GCTGGTTGGTTGGGATAGTA+AGG | + | chr7.1:49157621-49157640 | MS.gene011042:CDS | 50.0% |
| ! | GTCTTTGAGGATGTCCGGAA+CGG | + | chr7.1:49158482-49158501 | MS.gene011042:CDS | 50.0% |
| ! | TCTTTGAGGATGTCCGGAAC+GGG | + | chr7.1:49158483-49158502 | MS.gene011042:CDS | 50.0% |
| !!! | CCTCAACTTTTGGAGCTGGT+TGG | + | chr7.1:49157607-49157626 | MS.gene011042:CDS | 50.0% |
| GCTACCTGAAGACATCACCG+AGG | + | chr7.1:49161707-49161726 | MS.gene011042:CDS | 55.0% | |
| GGTGTGTCCAGTGTCTACAC+CGG | - | chr7.1:49156312-49156331 | None:intergenic | 55.0% | |
| TCATTGACCCGTGCGAAGCA+CGG | - | chr7.1:49159856-49159875 | None:intergenic | 55.0% | |
| ! | ACATGTGCCGGTGTAGACAC+TGG | + | chr7.1:49156302-49156321 | MS.gene011042:intron | 55.0% |
| ATCGCATCCCGTGCTTCGCA+CGG | + | chr7.1:49159845-49159864 | MS.gene011042:intron | 60.0% | |
| CATTGACCCGTGCGAAGCAC+GGG | - | chr7.1:49159855-49159874 | None:intergenic | 60.0% | |
| TCGCATCCCGTGCTTCGCAC+GGG | + | chr7.1:49159846-49159865 | MS.gene011042:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 49155841 | 49161994 | 49155841 | ID=MS.gene011042 |
| chr7.1 | mRNA | 49155841 | 49161994 | 49155841 | ID=MS.gene011042.t1;Parent=MS.gene011042 |
| chr7.1 | exon | 49155841 | 49156008 | 49155841 | ID=MS.gene011042.t1.exon1;Parent=MS.gene011042.t1 |
| chr7.1 | CDS | 49155841 | 49156008 | 49155841 | ID=cds.MS.gene011042.t1;Parent=MS.gene011042.t1 |
| chr7.1 | exon | 49156549 | 49156793 | 49156549 | ID=MS.gene011042.t1.exon2;Parent=MS.gene011042.t1 |
| chr7.1 | CDS | 49156549 | 49156793 | 49156549 | ID=cds.MS.gene011042.t1;Parent=MS.gene011042.t1 |
| chr7.1 | exon | 49156890 | 49157061 | 49156890 | ID=MS.gene011042.t1.exon3;Parent=MS.gene011042.t1 |
| chr7.1 | CDS | 49156890 | 49157061 | 49156890 | ID=cds.MS.gene011042.t1;Parent=MS.gene011042.t1 |
| chr7.1 | exon | 49157410 | 49157448 | 49157410 | ID=MS.gene011042.t1.exon4;Parent=MS.gene011042.t1 |
| chr7.1 | CDS | 49157410 | 49157448 | 49157410 | ID=cds.MS.gene011042.t1;Parent=MS.gene011042.t1 |
| chr7.1 | exon | 49157571 | 49157642 | 49157571 | ID=MS.gene011042.t1.exon5;Parent=MS.gene011042.t1 |
| chr7.1 | CDS | 49157571 | 49157642 | 49157571 | ID=cds.MS.gene011042.t1;Parent=MS.gene011042.t1 |
| chr7.1 | exon | 49157722 | 49157838 | 49157722 | ID=MS.gene011042.t1.exon6;Parent=MS.gene011042.t1 |
| chr7.1 | CDS | 49157722 | 49157838 | 49157722 | ID=cds.MS.gene011042.t1;Parent=MS.gene011042.t1 |
| chr7.1 | exon | 49158055 | 49158266 | 49158055 | ID=MS.gene011042.t1.exon7;Parent=MS.gene011042.t1 |
| chr7.1 | CDS | 49158055 | 49158266 | 49158055 | ID=cds.MS.gene011042.t1;Parent=MS.gene011042.t1 |
| chr7.1 | exon | 49158349 | 49158504 | 49158349 | ID=MS.gene011042.t1.exon8;Parent=MS.gene011042.t1 |
| chr7.1 | CDS | 49158349 | 49158504 | 49158349 | ID=cds.MS.gene011042.t1;Parent=MS.gene011042.t1 |
| chr7.1 | exon | 49158955 | 49159154 | 49158955 | ID=MS.gene011042.t1.exon9;Parent=MS.gene011042.t1 |
| chr7.1 | CDS | 49158955 | 49159154 | 49158955 | ID=cds.MS.gene011042.t1;Parent=MS.gene011042.t1 |
| chr7.1 | exon | 49159366 | 49159523 | 49159366 | ID=MS.gene011042.t1.exon10;Parent=MS.gene011042.t1 |
| chr7.1 | CDS | 49159366 | 49159523 | 49159366 | ID=cds.MS.gene011042.t1;Parent=MS.gene011042.t1 |
| chr7.1 | exon | 49160597 | 49160693 | 49160597 | ID=MS.gene011042.t1.exon11;Parent=MS.gene011042.t1 |
| chr7.1 | CDS | 49160597 | 49160693 | 49160597 | ID=cds.MS.gene011042.t1;Parent=MS.gene011042.t1 |
| chr7.1 | exon | 49161637 | 49161728 | 49161637 | ID=MS.gene011042.t1.exon12;Parent=MS.gene011042.t1 |
| chr7.1 | CDS | 49161637 | 49161728 | 49161637 | ID=cds.MS.gene011042.t1;Parent=MS.gene011042.t1 |
| chr7.1 | exon | 49161821 | 49161994 | 49161821 | ID=MS.gene011042.t1.exon13;Parent=MS.gene011042.t1 |
| chr7.1 | CDS | 49161821 | 49161994 | 49161821 | ID=cds.MS.gene011042.t1;Parent=MS.gene011042.t1 |
| Gene Sequence |
| Protein sequence |
