Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81418.t1 | XP_003617670.1 | 98.3 | 695 | 12 | 0 | 1 | 695 | 1 | 695 | 0.00E+00 | 1342 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81418.t1 | Q9FJ70 | 69.2 | 686 | 194 | 6 | 1 | 672 | 1 | 683 | 9.0e-271 | 934.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81418.t1 | G7K4B3 | 98.3 | 695 | 12 | 0 | 1 | 695 | 1 | 695 | 0.0e+00 | 1342.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene81418 | 0.862698 | 4.22E-64 | -1.69E-46 |
| MS.gene049369 | MS.gene81418 | 0.85755 | 1.51E-62 | -1.69E-46 |
| MS.gene050670 | MS.gene81418 | 0.805139 | 1.54E-49 | -1.69E-46 |
| MS.gene050971 | MS.gene81418 | 0.814593 | 1.42E-51 | -1.69E-46 |
| MS.gene05105 | MS.gene81418 | 0.804756 | 1.85E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene81418 | 0.841951 | 3.48E-58 | -1.69E-46 |
| MS.gene052340 | MS.gene81418 | 0.805333 | 1.40E-49 | -1.69E-46 |
| MS.gene05316 | MS.gene81418 | 0.811875 | 5.63E-51 | -1.69E-46 |
| MS.gene053449 | MS.gene81418 | 0.805134 | 1.55E-49 | -1.69E-46 |
| MS.gene053758 | MS.gene81418 | 0.836631 | 8.35E-57 | -1.69E-46 |
| MS.gene053912 | MS.gene81418 | 0.821428 | 4.06E-53 | -1.69E-46 |
| MS.gene054123 | MS.gene81418 | 0.808157 | 3.55E-50 | -1.69E-46 |
| MS.gene054349 | MS.gene81418 | 0.806171 | 9.36E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene81418 | 0.801142 | 1.04E-48 | -1.69E-46 |
| MS.gene055744 | MS.gene81418 | 0.803288 | 3.74E-49 | -1.69E-46 |
| MS.gene055909 | MS.gene81418 | 0.809589 | 1.76E-50 | -1.69E-46 |
| MS.gene055911 | MS.gene81418 | 0.808539 | 2.95E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene81418 | 0.830716 | 2.51E-55 | -1.69E-46 |
| MS.gene05664 | MS.gene81418 | 0.81035 | 1.20E-50 | -1.69E-46 |
| MS.gene056659 | MS.gene81418 | 0.819305 | 1.25E-52 | -1.69E-46 |
| MS.gene05666 | MS.gene81418 | 0.80765 | 4.56E-50 | -1.69E-46 |
| MS.gene05735 | MS.gene81418 | 0.810806 | 9.60E-51 | -1.69E-46 |
| MS.gene057396 | MS.gene81418 | 0.804286 | 2.32E-49 | -1.69E-46 |
| MS.gene057537 | MS.gene81418 | 0.818492 | 1.91E-52 | -1.69E-46 |
| MS.gene057734 | MS.gene81418 | 0.811498 | 6.79E-51 | -1.69E-46 |
| MS.gene057823 | MS.gene81418 | 0.803771 | 2.97E-49 | -1.69E-46 |
| MS.gene057927 | MS.gene81418 | 0.83242 | 9.55E-56 | -1.69E-46 |
| MS.gene058007 | MS.gene81418 | 0.818197 | 2.22E-52 | -1.69E-46 |
| MS.gene058075 | MS.gene81418 | 0.816249 | 6.10E-52 | -1.69E-46 |
| MS.gene058090 | MS.gene81418 | 0.821407 | 4.10E-53 | -1.69E-46 |
| MS.gene058120 | MS.gene81418 | 0.827673 | 1.37E-54 | -1.69E-46 |
| MS.gene058928 | MS.gene81418 | 0.825912 | 3.62E-54 | -1.69E-46 |
| MS.gene058948 | MS.gene81418 | 0.816182 | 6.31E-52 | -1.69E-46 |
| MS.gene058949 | MS.gene81418 | 0.814371 | 1.59E-51 | -1.69E-46 |
| MS.gene059366 | MS.gene81418 | 0.816137 | 6.46E-52 | -1.69E-46 |
| MS.gene059674 | MS.gene81418 | 0.839862 | 1.23E-57 | -1.69E-46 |
| MS.gene059711 | MS.gene81418 | 0.80184 | 7.45E-49 | -1.69E-46 |
| MS.gene059807 | MS.gene81418 | 0.862632 | 4.42E-64 | -1.69E-46 |
| MS.gene05986 | MS.gene81418 | 0.810151 | 1.33E-50 | -1.69E-46 |
| MS.gene060496 | MS.gene81418 | 0.832717 | 8.06E-56 | -1.69E-46 |
| MS.gene061041 | MS.gene81418 | 0.813755 | 2.18E-51 | -1.69E-46 |
| MS.gene061051 | MS.gene81418 | -0.8214 | 4.12E-53 | -1.69E-46 |
| MS.gene061154 | MS.gene81418 | 0.801771 | 7.69E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene42796 | MS.gene81418 | PPI |
| MS.gene81418 | MS.gene64600 | PPI |
| MS.gene38162 | MS.gene81418 | PPI |
| MS.gene011042 | MS.gene81418 | PPI |
| MS.gene81418 | MS.gene91965 | PPI |
| MS.gene81418 | MS.gene45922 | PPI |
| MS.gene81418 | MS.gene020935 | PPI |
| MS.gene81418 | MS.gene020160 | PPI |
| MS.gene020666 | MS.gene81418 | PPI |
| MS.gene81418 | MS.gene022791 | PPI |
| MS.gene81418 | MS.gene054984 | PPI |
| MS.gene81418 | MS.gene93664 | PPI |
| MS.gene81418 | MS.gene027354 | PPI |
| MS.gene81418 | MS.gene63839 | PPI |
| MS.gene81418 | MS.gene051265 | PPI |
| MS.gene023044 | MS.gene81418 | PPI |
| MS.gene81418 | MS.gene84391 | PPI |
| MS.gene81418 | MS.gene38106 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81418.t1 | MTR_5g094160 | 98.273 | 695 | 12 | 0 | 1 | 695 | 1 | 695 | 0.0 | 1406 |
| MS.gene81418.t1 | MTR_5g098130 | 69.559 | 680 | 192 | 2 | 1 | 680 | 1 | 665 | 0.0 | 979 |
| MS.gene81418.t1 | MTR_8g011460 | 66.720 | 628 | 208 | 1 | 1 | 627 | 1 | 628 | 0.0 | 873 |
| MS.gene81418.t1 | MTR_7g052820 | 68.051 | 626 | 197 | 2 | 1 | 623 | 1 | 626 | 0.0 | 865 |
| MS.gene81418.t1 | MTR_5g098130 | 70.492 | 488 | 144 | 0 | 1 | 488 | 1 | 488 | 0.0 | 724 |
| MS.gene81418.t1 | MTR_5g098130 | 24.229 | 227 | 152 | 5 | 405 | 617 | 146 | 366 | 5.60e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81418.t1 | AT5G55400 | 70.072 | 695 | 188 | 7 | 1 | 681 | 1 | 689 | 0.0 | 995 |
| MS.gene81418.t1 | AT5G55400 | 70.072 | 695 | 188 | 7 | 1 | 681 | 1 | 689 | 0.0 | 995 |
| MS.gene81418.t1 | AT5G55400 | 70.072 | 695 | 188 | 7 | 1 | 681 | 1 | 689 | 0.0 | 995 |
| MS.gene81418.t1 | AT4G26700 | 71.199 | 684 | 193 | 4 | 1 | 682 | 1 | 682 | 0.0 | 993 |
| MS.gene81418.t1 | AT4G26700 | 71.199 | 684 | 193 | 4 | 1 | 682 | 1 | 682 | 0.0 | 993 |
| MS.gene81418.t1 | AT4G26700 | 71.199 | 684 | 193 | 4 | 1 | 682 | 1 | 682 | 0.0 | 993 |
| MS.gene81418.t1 | AT5G35700 | 67.057 | 683 | 207 | 3 | 1 | 682 | 1 | 666 | 0.0 | 946 |
| MS.gene81418.t1 | AT2G04750 | 64.749 | 678 | 210 | 3 | 1 | 676 | 1 | 651 | 0.0 | 901 |
| MS.gene81418.t1 | AT4G26700 | 73.473 | 573 | 150 | 2 | 1 | 572 | 1 | 572 | 0.0 | 880 |
| MS.gene81418.t1 | AT4G26700 | 73.473 | 573 | 150 | 2 | 1 | 572 | 1 | 572 | 0.0 | 880 |
| MS.gene81418.t1 | AT4G26700 | 73.473 | 573 | 150 | 2 | 1 | 572 | 1 | 572 | 0.0 | 880 |
| MS.gene81418.t1 | AT5G48460 | 65.361 | 638 | 219 | 2 | 1 | 636 | 1 | 638 | 0.0 | 863 |
| MS.gene81418.t1 | AT4G26700 | 74.081 | 517 | 131 | 3 | 167 | 682 | 19 | 533 | 0.0 | 790 |
Find 141 sgRNAs with CRISPR-Local
Find 349 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTCACATTCAGAGCTTTA+AGG | 0.159596 | 5.2:-79386237 | MS.gene81418:intron |
| TGTTTCCAGTTAACCGATTC+TGG | 0.190412 | 5.2:+79386707 | None:intergenic |
| TTTCTAAATGGCATTCTAAT+TGG | 0.198379 | 5.2:+79386671 | None:intergenic |
| GTGATGCTGATATTCTTAAA+TGG | 0.216833 | 5.2:-79386292 | MS.gene81418:CDS |
| CAAAACGAAATCTTTCTCTT+TGG | 0.257305 | 5.2:-79389127 | MS.gene81418:CDS |
| AAGTGTTTACCTTTATGATT+TGG | 0.264559 | 5.2:+79388879 | None:intergenic |
| AGTTGGAGAAATCACCATTA+AGG | 0.271613 | 5.2:+79385241 | None:intergenic |
| GACACCTCAGCTTGTGGAAT+TGG | 0.275119 | 5.2:-79388661 | MS.gene81418:CDS |
| GTCAAGTGGACTCTTCTTCC+TGG | 0.297646 | 5.2:-79386096 | MS.gene81418:CDS |
| ATCCTCAGGTAACAAATATA+TGG | 0.304430 | 5.2:+79385553 | None:intergenic |
| GAAAGTTATTCATCCCTTAA+TGG | 0.306011 | 5.2:-79385255 | MS.gene81418:CDS |
| AAAACGAAATCTTTCTCTTT+GGG | 0.307791 | 5.2:-79389126 | MS.gene81418:CDS |
| CTTGAGTCAGTATCTTCCTT+TGG | 0.321034 | 5.2:-79389351 | MS.gene81418:CDS |
| CACAAGATTTGCTCTTTCAT+TGG | 0.321474 | 5.2:+79387286 | None:intergenic |
| TCCCCTGCCCCTTCCGTTTG+CGG | 0.322058 | 5.2:-79385285 | MS.gene81418:CDS |
| TCTTCACAACTTGAATTTGA+TGG | 0.329624 | 5.2:-79385183 | MS.gene81418:CDS |
| CCGAATTGAGGCATAGAGTA+TGG | 0.333553 | 5.2:+79389090 | None:intergenic |
| GGAAATAAGAAGCTCATTCT+TGG | 0.337857 | 5.2:-79386563 | MS.gene81418:intron |
| CGTTGTCTTCGGTCTGTTGT+TGG | 0.341261 | 5.2:+79385358 | None:intergenic |
| GGAAGGGGCAGGGGAAGCTT+CGG | 0.342813 | 5.2:+79385293 | None:intergenic |
| AGTGTTTACCTTTATGATTT+GGG | 0.344504 | 5.2:+79388880 | None:intergenic |
| CACTTTGACCCTTGGTAACT+AGG | 0.354139 | 5.2:+79386033 | None:intergenic |
| CTCAATTCGGCTAAGGCTAT+TGG | 0.354276 | 5.2:-79389077 | MS.gene81418:CDS |
| GTACAGTGAAGATGAGATTA+GGG | 0.357196 | 5.2:-79390401 | MS.gene81418:CDS |
| CATCACTTATCTCCTTTCCT+TGG | 0.359853 | 5.2:+79386309 | None:intergenic |
| GTAATTTCAGATCCAACTTC+TGG | 0.360902 | 5.2:-79388703 | MS.gene81418:intron |
| TTTGTTACCTGAGGATATTA+TGG | 0.372370 | 5.2:-79385546 | MS.gene81418:CDS |
| TGTACAGTGAAGATGAGATT+AGG | 0.373898 | 5.2:-79390402 | MS.gene81418:CDS |
| GAATTTCTCTTCTGATTTGA+AGG | 0.374365 | 5.2:-79388401 | MS.gene81418:intron |
| CTATTTGATCTTTCAAAAGA+TGG | 0.374761 | 5.2:-79389311 | MS.gene81418:CDS |
| CTTATCAATGTTGCTGTGCC+TGG | 0.375092 | 5.2:-79389176 | MS.gene81418:CDS |
| GAAGGGGCAGGGGAAGCTTC+GGG | 0.377533 | 5.2:+79385294 | None:intergenic |
| ATCACTTATCTCCTTTCCTT+GGG | 0.393063 | 5.2:+79386310 | None:intergenic |
| GTTGATTTCCCAAATCATAA+AGG | 0.401124 | 5.2:-79388888 | MS.gene81418:intron |
| GTGGCTGGACTGCAATGTTC+AGG | 0.408374 | 5.2:+79387326 | None:intergenic |
| CACGATTAGCGGATCAGAAA+AGG | 0.409153 | 5.2:-79389420 | MS.gene81418:CDS |
| CATCTTAGTAGAACTTTGTC+AGG | 0.409635 | 5.2:+79388469 | None:intergenic |
| TCACCGCAAACGGAAGGGGC+AGG | 0.409829 | 5.2:+79385282 | None:intergenic |
| ACCGCAAACGGAAGGGGCAG+GGG | 0.409838 | 5.2:+79385284 | None:intergenic |
| CTCCTTGTTTCGTTGTAGCT+TGG | 0.413139 | 5.2:+79389495 | None:intergenic |
| CAAGCTGAGGTGTCTTCTTA+AGG | 0.418489 | 5.2:+79388670 | None:intergenic |
| CAGAATGGTAAAGTTACATA+TGG | 0.418490 | 5.2:-79390469 | MS.gene81418:CDS |
| GTAGAGAAGAGAGATGCTTT+AGG | 0.419231 | 5.2:-79386979 | MS.gene81418:CDS |
| TACCAAGATGTCAAAATTTG+AGG | 0.425052 | 5.2:-79390697 | None:intergenic |
| GAAGTTCAACCTGTGTAAAC+TGG | 0.425063 | 5.2:+79390643 | None:intergenic |
| CTATTTGAGGATGTCAGAAA+TGG | 0.430841 | 5.2:-79386914 | MS.gene81418:CDS |
| GGGTGGTTATGCTTTCGTTA+AGG | 0.441687 | 5.2:+79389450 | None:intergenic |
| TGATGCTGATATTCTTAAAT+GGG | 0.441756 | 5.2:-79386291 | MS.gene81418:CDS |
| TCGTGTAAATAATCTATTTG+AGG | 0.443027 | 5.2:-79386927 | MS.gene81418:CDS |
| TAGAGCCAAGGGTTGTCAAT+TGG | 0.447407 | 5.2:-79386058 | MS.gene81418:CDS |
| TTTAGCTTCATCATTAAAGA+TGG | 0.450321 | 5.2:+79390439 | None:intergenic |
| CTGACAAAGTTCTACTAAGA+TGG | 0.451061 | 5.2:-79388468 | MS.gene81418:CDS |
| ACTTTCATCTTCACCGCAAA+CGG | 0.454813 | 5.2:+79385272 | None:intergenic |
| CTAAATGGCATTCTAATTGG+AGG | 0.460061 | 5.2:+79386674 | None:intergenic |
| GTTGGAGAAATCACCATTAA+GGG | 0.466861 | 5.2:+79385242 | None:intergenic |
| GGAAGATACTGACTCAAGAA+TGG | 0.469267 | 5.2:+79389356 | None:intergenic |
| ACCCTTCTTCACACGATTAG+CGG | 0.469956 | 5.2:-79389431 | MS.gene81418:CDS |
| GAGACTCCAATACATTATAC+TGG | 0.471200 | 5.2:+79385380 | None:intergenic |
| AAGAGAGATGCTTTAGGATG+TGG | 0.471296 | 5.2:-79386973 | MS.gene81418:CDS |
| CACCGCAAACGGAAGGGGCA+GGG | 0.474925 | 5.2:+79385283 | None:intergenic |
| ATCCGCTAATCGTGTGAAGA+AGG | 0.478962 | 5.2:+79389429 | None:intergenic |
| TAACATTGGCGCACAAGACT+TGG | 0.479565 | 5.2:-79389042 | MS.gene81418:CDS |
| AACAGAAAAGTGAATAGCAT+TGG | 0.480035 | 5.2:-79386266 | MS.gene81418:CDS |
| TCGCTCAATTATTTCATCAC+AGG | 0.484806 | 5.2:-79387175 | MS.gene81418:intron |
| ATCAGTGTCGCACGAAAGCT+TGG | 0.486279 | 5.2:-79385581 | MS.gene81418:CDS |
| AGAATCGGTTAACTGGAAAC+AGG | 0.488063 | 5.2:-79386705 | MS.gene81418:CDS |
| TTGCAGCCAGTATAATGTAT+TGG | 0.489064 | 5.2:-79385386 | MS.gene81418:CDS |
| AAACATACCACTTTGACCCT+TGG | 0.491256 | 5.2:+79386025 | None:intergenic |
| AGGGGAAGCTTCGGGTGTGT+TGG | 0.494209 | 5.2:+79385302 | None:intergenic |
| ATCTTCACCGCAAACGGAAG+GGG | 0.494419 | 5.2:+79385278 | None:intergenic |
| ATTGGCATCTTTAGTATCCA+AGG | 0.497711 | 5.2:+79387304 | None:intergenic |
| GGCTAAGATCTGCCAGAAGT+TGG | 0.498355 | 5.2:+79388691 | None:intergenic |
| ACCAAGATGTCAAAATTTGA+GGG | 0.500673 | 5.2:-79390696 | None:intergenic |
| GCTTGAGCATGCAGAGAGAA+TGG | 0.506078 | 5.2:-79387264 | MS.gene81418:CDS |
| AAATGCAAGATTAAGATTTG+AGG | 0.509489 | 5.2:+79387199 | None:intergenic |
| TCAAATAGATCATTTGTAGC+TGG | 0.510329 | 5.2:+79389326 | None:intergenic |
| TGCGACACTGATTATGTAAG+TGG | 0.514332 | 5.2:+79385592 | None:intergenic |
| TTCTCACTAGTCAATGTAGC+TGG | 0.515154 | 5.2:-79386602 | MS.gene81418:CDS |
| CCATACTCTATGCCTCAATT+CGG | 0.515651 | 5.2:-79389090 | MS.gene81418:CDS |
| GGCGCACAAGACTTGGTTGA+CGG | 0.518448 | 5.2:-79389035 | MS.gene81418:CDS |
| TTCTCAGTGCAGTAGAGCCA+AGG | 0.523939 | 5.2:-79386070 | MS.gene81418:CDS |
| AGGAAATGAATCGTTGTCTT+CGG | 0.525710 | 5.2:+79385347 | None:intergenic |
| AGGTTCCAATTGACAACCCT+TGG | 0.526371 | 5.2:+79386053 | None:intergenic |
| TTCCATATATTTGTTACCTG+AGG | 0.531885 | 5.2:-79385555 | MS.gene81418:CDS |
| GAAGATACTGACTCAAGAAT+GGG | 0.532220 | 5.2:+79389357 | None:intergenic |
| ATCTTTAATGATGAAGCTAA+AGG | 0.533344 | 5.2:-79390437 | MS.gene81418:CDS |
| TCATCTTCACCGCAAACGGA+AGG | 0.536360 | 5.2:+79385276 | None:intergenic |
| TCTTTAGTATCCAAGGTGGC+TGG | 0.540347 | 5.2:+79387311 | None:intergenic |
| ACGATTAGCGGATCAGAAAA+GGG | 0.542026 | 5.2:-79389419 | MS.gene81418:CDS |
| TATTTGAGGATGTCAGAAAT+GGG | 0.544161 | 5.2:-79386913 | MS.gene81418:intron |
| AGGATGTGGATCAATAGTCT+TGG | 0.545573 | 5.2:-79386959 | MS.gene81418:CDS |
| TTATCAATGTTGCTGTGCCT+GGG | 0.546584 | 5.2:-79389175 | MS.gene81418:CDS |
| GAGATCTCATTCCCAAGGAA+AGG | 0.547069 | 5.2:-79386321 | MS.gene81418:CDS |
| TAAGAAGACACCTCAGCTTG+TGG | 0.548237 | 5.2:-79388667 | MS.gene81418:CDS |
| GGATGCACAGTTGTTAACAT+TGG | 0.549678 | 5.2:-79389056 | MS.gene81418:CDS |
| CAAAAGATGGCATTCTTCTG+TGG | 0.549711 | 5.2:-79389298 | MS.gene81418:intron |
| CAATAGCCTTAGCCGAATTG+AGG | 0.553192 | 5.2:+79389078 | None:intergenic |
| GGTATCGTCAACACTCAAGT+TGG | 0.555729 | 5.2:+79385224 | None:intergenic |
| GCAAAAGATACTTGAGTGCA+AGG | 0.556299 | 5.2:-79387238 | MS.gene81418:CDS |
| ATTAAGATTTGAGGTGCCCT+CGG | 0.556331 | 5.2:+79387208 | None:intergenic |
| GACTGCAATGTTCAGGAGCA+AGG | 0.557987 | 5.2:+79387333 | None:intergenic |
| CATCTTCACCGCAAACGGAA+GGG | 0.558499 | 5.2:+79385277 | None:intergenic |
| CTTGAGCATGCAGAGAGAAT+GGG | 0.564190 | 5.2:-79387263 | MS.gene81418:CDS |
| GTGAGAGTGCTAGCAGGTGA+AGG | 0.567234 | 5.2:+79385327 | None:intergenic |
| TATACCTCCATAATATCCTC+AGG | 0.569641 | 5.2:+79385539 | None:intergenic |
| TCTCAGTGCAGTAGAGCCAA+GGG | 0.573854 | 5.2:-79386069 | MS.gene81418:CDS |
| ACATTGCAGTCCAGCCACCT+TGG | 0.573939 | 5.2:-79387321 | MS.gene81418:CDS |
| GCTCGCTCGTCTATAGTCCC+AGG | 0.575614 | 5.2:+79389158 | None:intergenic |
| TGCAATCAAGTCATAAGAGT+CGG | 0.575866 | 5.2:-79386638 | MS.gene81418:CDS |
| GCTCACATAAACAGCTACCT+TGG | 0.577283 | 5.2:-79389386 | MS.gene81418:CDS |
| GAATTTGATGGCGTTGCCGT+CGG | 0.586421 | 5.2:-79385171 | MS.gene81418:CDS |
| AACCAAGCTACAACGAAACA+AGG | 0.586583 | 5.2:-79389497 | MS.gene81418:CDS |
| TCTATGCCTCAATTCGGCTA+AGG | 0.592579 | 5.2:-79389084 | MS.gene81418:CDS |
| ATCAACCCTAAAACAAGATG+AGG | 0.596760 | 5.2:+79388905 | None:intergenic |
| TCATTTGTAGCTGGATCCAA+AGG | 0.600205 | 5.2:+79389335 | None:intergenic |
| AGAGACTGTTGTATCAGAAG+TGG | 0.603731 | 5.2:+79385203 | None:intergenic |
| TCCGCTAATCGTGTGAAGAA+GGG | 0.603800 | 5.2:+79389430 | None:intergenic |
| GCTTTCGTTAAGGAATGATG+AGG | 0.604252 | 5.2:+79389460 | None:intergenic |
| GCTTCAAAGCCAGTTTACAC+AGG | 0.605203 | 5.2:-79390652 | MS.gene81418:CDS |
| TATATATTTACAGGATGCAG+AGG | 0.606274 | 5.2:-79387378 | MS.gene81418:intron |
| AATTTGAGATCTCATTCCCA+AGG | 0.610970 | 5.2:-79386326 | MS.gene81418:CDS |
| TTGGTAGTGAGAGTGCTAGC+AGG | 0.614552 | 5.2:+79385321 | None:intergenic |
| CTACTGCACTGAGAAGCTCC+AGG | 0.616153 | 5.2:+79386078 | None:intergenic |
| GTTACCTGAGGATATTATGG+AGG | 0.617888 | 5.2:-79385543 | MS.gene81418:intron |
| CAATTGGAACCTAGTTACCA+AGG | 0.625122 | 5.2:-79386042 | MS.gene81418:CDS |
| TCAAAATAACTCATCACCGA+CGG | 0.632299 | 5.2:+79385155 | None:intergenic |
| GGAATTGGTTGATGATAACC+AGG | 0.634053 | 5.2:-79388646 | MS.gene81418:intron |
| CAGGATAAGAGCTTGTCAAG+TGG | 0.634181 | 5.2:-79386110 | MS.gene81418:CDS |
| TCAACCAATTCCACAAGCTG+AGG | 0.641796 | 5.2:+79388657 | None:intergenic |
| CTAGTTACCAAGGGTCAAAG+TGG | 0.646174 | 5.2:-79386032 | MS.gene81418:intron |
| GCTAATCGTGTGAAGAAGGG+TGG | 0.662528 | 5.2:+79389433 | None:intergenic |
| CAAAAGATACTTGAGTGCAA+GGG | 0.662739 | 5.2:-79387237 | MS.gene81418:CDS |
| TCAAGAATGGGTCATCACCA+AGG | 0.671193 | 5.2:+79389369 | None:intergenic |
| AATTGGAACCTAGTTACCAA+GGG | 0.672164 | 5.2:-79386041 | MS.gene81418:CDS |
| TACAGTGAAGATGAGATTAG+GGG | 0.672715 | 5.2:-79390400 | MS.gene81418:CDS |
| ACAGTGAAGATGAGATTAGG+GGG | 0.681059 | 5.2:-79390399 | MS.gene81418:CDS |
| GAGTGCAAGGGACATTACCG+AGG | 0.683369 | 5.2:-79387225 | MS.gene81418:CDS |
| GCTGGCAATGATATTGTGCA+AGG | 0.690463 | 5.2:-79386584 | MS.gene81418:CDS |
| AGTGCAAGGGACATTACCGA+GGG | 0.694785 | 5.2:-79387224 | MS.gene81418:CDS |
| GGCATCTTTAGTATCCAAGG+TGG | 0.710629 | 5.2:+79387307 | None:intergenic |
| CAAGCTACAACGAAACAAGG+AGG | 0.764617 | 5.2:-79389494 | MS.gene81418:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTTCTTAAATTATTTAATT+AGG | - | chr5.2:79388759-79388778 | MS.gene81418:intron | 10.0% |
| !! | GTTCTTAAATTATTTAATTA+GGG | - | chr5.2:79388760-79388779 | MS.gene81418:intron | 10.0% |
| !!! | GACATTATTTATTTTATTAA+TGG | - | chr5.2:79387051-79387070 | MS.gene81418:intron | 10.0% |
| !!! | TCATAATTTTTTTTTTTTGA+AGG | - | chr5.2:79390018-79390037 | MS.gene81418:intron | 10.0% |
| !!! | TTAACTATCTTATAATTTTT+TGG | - | chr5.2:79388286-79388305 | MS.gene81418:intron | 10.0% |
| !!! | TTTTTACTAATGAAAATATT+CGG | + | chr5.2:79387839-79387858 | None:intergenic | 10.0% |
| !! | AATTCAAATAACTAAACTAA+AGG | + | chr5.2:79387019-79387038 | None:intergenic | 15.0% |
| !! | ATGAATTAATAAATTTAGGT+GGG | + | chr5.2:79390054-79390073 | None:intergenic | 15.0% |
| !! | TATGAATTAATAAATTTAGG+TGG | + | chr5.2:79390055-79390074 | None:intergenic | 15.0% |
| !!! | AATAACTTACTTTTGATTTA+AGG | + | chr5.2:79385232-79385251 | None:intergenic | 15.0% |
| !!! | ATTAAAGGTAGATTTTTATT+AGG | - | chr5.2:79387981-79388000 | MS.gene81418:intron | 15.0% |
| !!! | TATTTTTACAAATTGTGTTT+AGG | - | chr5.2:79387292-79387311 | MS.gene81418:CDS | 15.0% |
| !!! | TTTAACAACATTTTATGATT+AGG | - | chr5.2:79387485-79387504 | MS.gene81418:intron | 15.0% |
| !!! | TTTAGTTATTTGAATTTTCT+TGG | - | chr5.2:79387023-79387042 | MS.gene81418:CDS | 15.0% |
| !! | AAAAAGCAGGATATATAAAA+AGG | - | chr5.2:79387854-79387873 | MS.gene81418:intron | 20.0% |
| !! | AAAAGCAGGATATATAAAAA+GGG | - | chr5.2:79387855-79387874 | MS.gene81418:intron | 20.0% |
| !! | AAATGAGGAAAAAGAAAAAA+AGG | + | chr5.2:79387790-79387809 | None:intergenic | 20.0% |
| !! | AAATGTCGACAAAATATTAT+AGG | + | chr5.2:79386866-79386885 | None:intergenic | 20.0% |
| !! | AATAACTTCTGCAATTATAT+TGG | + | chr5.2:79387910-79387929 | None:intergenic | 20.0% |
| !! | AATATAATTGCAGAAGTTAT+TGG | - | chr5.2:79387909-79387928 | MS.gene81418:intron | 20.0% |
| !! | AATGAGGAAAAAGAAAAAAA+GGG | + | chr5.2:79387789-79387808 | None:intergenic | 20.0% |
| !! | AATGTCGACAAAATATTATA+GGG | + | chr5.2:79386865-79386884 | None:intergenic | 20.0% |
| !! | ATTACATGATACAAAAACTA+CGG | + | chr5.2:79385701-79385720 | None:intergenic | 20.0% |
| !! | CAAAAATATTAGAGAAAAGA+TGG | - | chr5.2:79385945-79385964 | MS.gene81418:intron | 20.0% |
| !! | TTTCAAATGATTAGGAATTT+CGG | - | chr5.2:79385874-79385893 | MS.gene81418:intron | 20.0% |
| !! | TTTGTATCATGTAATACTTA+GGG | - | chr5.2:79385706-79385725 | MS.gene81418:intron | 20.0% |
| !!! | AAAATTAAAACCTTTTGACT+TGG | + | chr5.2:79386100-79386119 | None:intergenic | 20.0% |
| !!! | AGTTAAAAGAGTATAAAACA+TGG | + | chr5.2:79388272-79388291 | None:intergenic | 20.0% |
| !!! | ATATGACATCTTTTTAGTAT+CGG | + | chr5.2:79388815-79388834 | None:intergenic | 20.0% |
| !!! | GGTTTTTTGAAAAAACAAAA+TGG | - | chr5.2:79389629-79389648 | MS.gene81418:intron | 20.0% |
| !!! | TATTATTACATTTTTCATGC+AGG | - | chr5.2:79386308-79386327 | MS.gene81418:CDS | 20.0% |
| !!! | TATTTTCATTAGTAAAAAGC+AGG | - | chr5.2:79387841-79387860 | MS.gene81418:intron | 20.0% |
| !!! | TTAATGGTAAGTAAGTTTTA+TGG | - | chr5.2:79385523-79385542 | MS.gene81418:intron | 20.0% |
| !!! | TTAATTTTACACTTAGTCAA+TGG | - | chr5.2:79386112-79386131 | MS.gene81418:intron | 20.0% |
| !!! | TTTTAATTGTAGAATTCTCT+CGG | - | chr5.2:79385835-79385854 | MS.gene81418:intron | 20.0% |
| !!! | TTTTGTATCATGTAATACTT+AGG | - | chr5.2:79385705-79385724 | MS.gene81418:intron | 20.0% |
| ! | AAAACGAAATCTTTCTCTTT+GGG | - | chr5.2:79386719-79386738 | MS.gene81418:CDS | 25.0% |
| ! | AAAAGAGTTTAATTGAGAGA+AGG | - | chr5.2:79386032-79386051 | MS.gene81418:intron | 25.0% |
| ! | AAATGCAAGATTAAGATTTG+AGG | + | chr5.2:79388649-79388668 | None:intergenic | 25.0% |
| ! | AAGTGTTTACCTTTATGATT+TGG | + | chr5.2:79386969-79386988 | None:intergenic | 25.0% |
| ! | AATGAATCATGTGAAAAAGA+AGG | - | chr5.2:79388010-79388029 | MS.gene81418:intron | 25.0% |
| ! | AGTGTTTACCTTTATGATTT+GGG | + | chr5.2:79386968-79386987 | None:intergenic | 25.0% |
| ! | ATAAACGATTGATCATAGTT+CGG | - | chr5.2:79385645-79385664 | MS.gene81418:intron | 25.0% |
| ! | ATCTCTTTCAAAAATCAGAA+TGG | - | chr5.2:79385361-79385380 | MS.gene81418:CDS | 25.0% |
| ! | ATCTTTAATGATGAAGCTAA+AGG | - | chr5.2:79385408-79385427 | MS.gene81418:CDS | 25.0% |
| ! | ATGAATCATGTGAAAAAGAA+GGG | - | chr5.2:79388011-79388030 | MS.gene81418:intron | 25.0% |
| ! | CTATTTGATCTTTCAAAAGA+TGG | - | chr5.2:79386534-79386553 | MS.gene81418:intron | 25.0% |
| ! | TAAAAATTAGCCAAACTCAA+CGG | + | chr5.2:79389866-79389885 | None:intergenic | 25.0% |
| ! | TACGATACAATACATGAAAT+TGG | + | chr5.2:79385288-79385307 | None:intergenic | 25.0% |
| ! | TCGTGTAAATAATCTATTTG+AGG | - | chr5.2:79388918-79388937 | MS.gene81418:intron | 25.0% |
| ! | TGATGCTGATATTCTTAAAT+GGG | - | chr5.2:79389554-79389573 | MS.gene81418:intron | 25.0% |
| ! | TTATGATTAGGATTGTTCTA+TGG | - | chr5.2:79387497-79387516 | MS.gene81418:intron | 25.0% |
| ! | TTATGGCGATATATATTTAC+AGG | - | chr5.2:79388458-79388477 | MS.gene81418:CDS | 25.0% |
| ! | TTTCTAAATGGCATTCTAAT+TGG | + | chr5.2:79389177-79389196 | None:intergenic | 25.0% |
| ! | TTTCTAACATTGTGACAATT+TGG | - | chr5.2:79385980-79385999 | MS.gene81418:intron | 25.0% |
| ! | TTTCTTCTTTCCTTATACAA+AGG | - | chr5.2:79385251-79385270 | MS.gene81418:CDS | 25.0% |
| !! | AAGATTTCGTTTTGTATTGA+TGG | + | chr5.2:79386712-79386731 | None:intergenic | 25.0% |
| !! | AAGGTAGATTTTTATTAGGT+TGG | - | chr5.2:79387985-79388004 | MS.gene81418:intron | 25.0% |
| !! | ATCAACGTCTTTATTGATTA+TGG | - | chr5.2:79388441-79388460 | MS.gene81418:CDS | 25.0% |
| !! | CTTCATGTATATTTTCAACT+TGG | - | chr5.2:79389005-79389024 | MS.gene81418:intron | 25.0% |
| !! | TACATACCATTCTTTTCAAT+GGG | + | chr5.2:79386217-79386236 | None:intergenic | 25.0% |
| !! | TACTTTTATCGTGCATTTAA+CGG | + | chr5.2:79389664-79389683 | None:intergenic | 25.0% |
| !! | TTTAGCTTCATCATTAAAGA+TGG | + | chr5.2:79385409-79385428 | None:intergenic | 25.0% |
| !! | TTTTGCCAAAACCAAAAAAT+CGG | - | chr5.2:79389376-79389395 | MS.gene81418:CDS | 25.0% |
| !!! | ACTAGCCTTTAATATAATAC+CGG | - | chr5.2:79386615-79386634 | MS.gene81418:CDS | 25.0% |
| !!! | ACTTTGAAATGATTAGTGAA+CGG | - | chr5.2:79385919-79385938 | MS.gene81418:intron | 25.0% |
| !!! | AGTAAGAAGGAGTTATTTTT+TGG | - | chr5.2:79388079-79388098 | MS.gene81418:intron | 25.0% |
| !!! | TCTATTTTTCAGCTTTATTG+TGG | - | chr5.2:79389460-79389479 | MS.gene81418:CDS | 25.0% |
| !!! | TGATGATGTATTTTAAGAGA+AGG | + | chr5.2:79388971-79388990 | None:intergenic | 25.0% |
| !!! | TGATGGATTAATACTAGTTT+GGG | - | chr5.2:79390141-79390160 | MS.gene81418:intron | 25.0% |
| !!! | TGATTTTGAAGCTTTCTTAA+TGG | - | chr5.2:79385507-79385526 | MS.gene81418:intron | 25.0% |
| !!! | TTGATGGATTAATACTAGTT+TGG | - | chr5.2:79390140-79390159 | MS.gene81418:intron | 25.0% |
| !!! | TTTACTTTTTTTCGTGTAGA+TGG | - | chr5.2:79389085-79389104 | MS.gene81418:CDS | 25.0% |
| !!! | TTTTTTGTTGAACTTATGAC+AGG | - | chr5.2:79390412-79390431 | MS.gene81418:CDS | 25.0% |
| AAAAAAAGGGAAACAATAGC+CGG | + | chr5.2:79387776-79387795 | None:intergenic | 30.0% | |
| AACAAGACATAAATCAAACC+CGG | + | chr5.2:79386637-79386656 | None:intergenic | 30.0% | |
| AACAGAAAAGTGAATAGCAT+TGG | - | chr5.2:79389579-79389598 | MS.gene81418:intron | 30.0% | |
| AATGGTATGTAGCATTGTAA+TGG | - | chr5.2:79386226-79386245 | MS.gene81418:intron | 30.0% | |
| ATCCTCAGGTAACAAATATA+TGG | + | chr5.2:79390295-79390314 | None:intergenic | 30.0% | |
| ATGAAGTTTAGAGACCAAAT+AGG | + | chr5.2:79389971-79389990 | None:intergenic | 30.0% | |
| ATTACTCCCATTGAAAAGAA+TGG | - | chr5.2:79386208-79386227 | MS.gene81418:intron | 30.0% | |
| CAAAACGAAATCTTTCTCTT+TGG | - | chr5.2:79386718-79386737 | MS.gene81418:CDS | 30.0% | |
| CAAACCCGGTATTATATTAA+AGG | + | chr5.2:79386623-79386642 | None:intergenic | 30.0% | |
| CAGAATGGTAAAGTTACATA+TGG | - | chr5.2:79385376-79385395 | MS.gene81418:CDS | 30.0% | |
| CCAAAATTGTCCTTTGTATA+AGG | + | chr5.2:79385264-79385283 | None:intergenic | 30.0% | |
| GAAAGTTATTCATCCCTTAA+TGG | - | chr5.2:79390590-79390609 | MS.gene81418:intron | 30.0% | |
| GAGATGATTTAACAGTTTCA+AGG | + | chr5.2:79385813-79385832 | None:intergenic | 30.0% | |
| GATCCTCAAAATATACTAGA+TGG | + | chr5.2:79387958-79387977 | None:intergenic | 30.0% | |
| GGTTCAATTTCAAACTATAG+AGG | + | chr5.2:79388409-79388428 | None:intergenic | 30.0% | |
| GTCTTTGTGACATTATTGTT+TGG | - | chr5.2:79386902-79386921 | MS.gene81418:intron | 30.0% | |
| GTGATGCTGATATTCTTAAA+TGG | - | chr5.2:79389553-79389572 | MS.gene81418:intron | 30.0% | |
| GTTTAATTGAGAGAAGGTAA+TGG | - | chr5.2:79386038-79386057 | MS.gene81418:CDS | 30.0% | |
| TATATATTTACAGGATGCAG+AGG | - | chr5.2:79388467-79388486 | MS.gene81418:CDS | 30.0% | |
| TATTTGAGGATGTCAGAAAT+GGG | - | chr5.2:79388932-79388951 | MS.gene81418:intron | 30.0% | |
| TCAAATAGATCATTTGTAGC+TGG | + | chr5.2:79386522-79386541 | None:intergenic | 30.0% | |
| TCTTCACAACTTGAATTTGA+TGG | - | chr5.2:79390662-79390681 | MS.gene81418:CDS | 30.0% | |
| TCTTCTGTGGTATATAAACA+GGG | - | chr5.2:79386560-79386579 | MS.gene81418:intron | 30.0% | |
| TGAAGCTATAACATGATGAA+TGG | + | chr5.2:79389312-79389331 | None:intergenic | 30.0% | |
| TTCTTCTGTGGTATATAAAC+AGG | - | chr5.2:79386559-79386578 | MS.gene81418:intron | 30.0% | |
| TTTGTTACCTGAGGATATTA+TGG | - | chr5.2:79390299-79390318 | MS.gene81418:intron | 30.0% | |
| ! | ACACCATCTAGTATATTTTG+AGG | - | chr5.2:79387952-79387971 | MS.gene81418:intron | 30.0% |
| ! | ACTTTGTTGTCATAATCTAG+AGG | - | chr5.2:79389431-79389450 | MS.gene81418:CDS | 30.0% |
| ! | ACTTTTATCGTGCATTTAAC+GGG | + | chr5.2:79389663-79389682 | None:intergenic | 30.0% |
| ! | AGAAATTCTTGACTGTTTTC+TGG | + | chr5.2:79387432-79387451 | None:intergenic | 30.0% |
| ! | AGACAAGATTTTTCCAGAAT+CGG | - | chr5.2:79389125-79389144 | MS.gene81418:CDS | 30.0% |
| ! | ATATCTGTTTAAGTTAGAGG+CGG | + | chr5.2:79385607-79385626 | None:intergenic | 30.0% |
| ! | ATGAATTTTCATCTCCAAAG+GGG | - | chr5.2:79387400-79387419 | MS.gene81418:intron | 30.0% |
| ! | CCTTATACAAAGGACAATTT+TGG | - | chr5.2:79385261-79385280 | MS.gene81418:CDS | 30.0% |
| ! | CTACATACCATTCTTTTCAA+TGG | + | chr5.2:79386218-79386237 | None:intergenic | 30.0% |
| ! | CTAGCCTTTAATATAATACC+GGG | - | chr5.2:79386616-79386635 | MS.gene81418:CDS | 30.0% |
| ! | CTCTCAATTAAACTCTTTTC+AGG | + | chr5.2:79386031-79386050 | None:intergenic | 30.0% |
| ! | GAAAAGTATAAGAAAGAGCA+TGG | + | chr5.2:79389904-79389923 | None:intergenic | 30.0% |
| ! | GAATTTCTCTTCTGATTTGA+AGG | - | chr5.2:79387444-79387463 | MS.gene81418:intron | 30.0% |
| ! | GACGTTGATTGATAATATCT+AGG | + | chr5.2:79388430-79388449 | None:intergenic | 30.0% |
| ! | GATGAATTTTCATCTCCAAA+GGG | - | chr5.2:79387399-79387418 | MS.gene81418:intron | 30.0% |
| ! | GTTGATTTCCCAAATCATAA+AGG | - | chr5.2:79386957-79386976 | MS.gene81418:CDS | 30.0% |
| ! | TGCATATCTGTTTAAGTTAG+AGG | + | chr5.2:79385610-79385629 | None:intergenic | 30.0% |
| ! | TTCCATATATTTGTTACCTG+AGG | - | chr5.2:79390290-79390309 | MS.gene81418:intron | 30.0% |
| ! | TTGAATGCAATTTTGTGTAC+AGG | - | chr5.2:79389716-79389735 | MS.gene81418:intron | 30.0% |
| !! | ATGTATTTTAAGAGAAGGAG+CGG | + | chr5.2:79388966-79388985 | None:intergenic | 30.0% |
| !! | ATTTTGAGGATCGCAATTAA+AGG | - | chr5.2:79387966-79387985 | MS.gene81418:intron | 30.0% |
| !! | CAGTTCTCTACTTTTCTAAA+TGG | + | chr5.2:79389189-79389208 | None:intergenic | 30.0% |
| !! | GATGGATTAATACTAGTTTG+GGG | - | chr5.2:79390142-79390161 | MS.gene81418:intron | 30.0% |
| !!! | AAGAAGGAGTTATTTTTTGG+TGG | - | chr5.2:79388082-79388101 | MS.gene81418:intron | 30.0% |
| !!! | GAGAAAAGATGGTTTTAGTA+TGG | - | chr5.2:79385956-79385975 | MS.gene81418:intron | 30.0% |
| !!! | GCTGTTTTTAAAGGAACTAA+GGG | - | chr5.2:79390111-79390130 | MS.gene81418:intron | 30.0% |
| !!! | TCTTACTTTTTATTCGTCTC+AGG | - | chr5.2:79387327-79387346 | MS.gene81418:CDS | 30.0% |
| !!! | TGCTGTTTTTAAAGGAACTA+AGG | - | chr5.2:79390110-79390129 | MS.gene81418:intron | 30.0% |
| !!! | TTCAATACTAGCCGATTTTT+TGG | + | chr5.2:79389390-79389409 | None:intergenic | 30.0% |
| AAATTGCGTATCTCATTACC+TGG | + | chr5.2:79387220-79387239 | None:intergenic | 35.0% | |
| AACAGATCATGATGCAAATG+AGG | + | chr5.2:79387805-79387824 | None:intergenic | 35.0% | |
| AAGGAAATAATTCCATGTGG+AGG | + | chr5.2:79387617-79387636 | None:intergenic | 35.0% | |
| AATTGCAGAAGTTATTGGCA+GGG | - | chr5.2:79387914-79387933 | MS.gene81418:intron | 35.0% | |
| AATTGGAACCTAGTTACCAA+GGG | - | chr5.2:79389804-79389823 | MS.gene81418:intron | 35.0% | |
| ACACAGCATTTATTCACCAT+AGG | + | chr5.2:79388202-79388221 | None:intergenic | 35.0% | |
| ACCACAAAGAAAAGCAACAT+AGG | + | chr5.2:79385331-79385350 | None:intergenic | 35.0% | |
| AGAAGGGAAATGATTCCATA+CGG | - | chr5.2:79388141-79388160 | MS.gene81418:intron | 35.0% | |
| AGCGAGACTTTCAAATGATT+AGG | - | chr5.2:79385866-79385885 | MS.gene81418:intron | 35.0% | |
| AGGAAATAATTCCATGTGGA+GGG | + | chr5.2:79387616-79387635 | None:intergenic | 35.0% | |
| AGGAAATGAATCGTTGTCTT+CGG | + | chr5.2:79390501-79390520 | None:intergenic | 35.0% | |
| AGTTGGAGAAATCACCATTA+AGG | + | chr5.2:79390607-79390626 | None:intergenic | 35.0% | |
| ATACGAATGAATCTCACTGA+TGG | + | chr5.2:79390339-79390358 | None:intergenic | 35.0% | |
| ATCAACCCTAAAACAAGATG+AGG | + | chr5.2:79386943-79386962 | None:intergenic | 35.0% | |
| ATCACTTATCTCCTTTCCTT+GGG | + | chr5.2:79389538-79389557 | None:intergenic | 35.0% | |
| ATTCTTAGAGCCAAGTCAAA+AGG | - | chr5.2:79386087-79386106 | MS.gene81418:CDS | 35.0% | |
| ATTGGCATCTTTAGTATCCA+AGG | + | chr5.2:79388544-79388563 | None:intergenic | 35.0% | |
| CAAAAGATACTTGAGTGCAA+GGG | - | chr5.2:79388608-79388627 | MS.gene81418:intron | 35.0% | |
| CATCTTAGTAGAACTTTGTC+AGG | + | chr5.2:79387379-79387398 | None:intergenic | 35.0% | |
| CTAAATGGCATTCTAATTGG+AGG | + | chr5.2:79389174-79389193 | None:intergenic | 35.0% | |
| CTAACATGAACAAGTTATGC+AGG | + | chr5.2:79388236-79388255 | None:intergenic | 35.0% | |
| CTATTTGAGGATGTCAGAAA+TGG | - | chr5.2:79388931-79388950 | MS.gene81418:intron | 35.0% | |
| CTGACAAAGTTCTACTAAGA+TGG | - | chr5.2:79387377-79387396 | MS.gene81418:intron | 35.0% | |
| GAAAGAGCGATAGTTATTGA+CGG | + | chr5.2:79389947-79389966 | None:intergenic | 35.0% | |
| GAACTAAGGGACTAATTTGA+TGG | - | chr5.2:79390124-79390143 | MS.gene81418:intron | 35.0% | |
| GAGACTCCAATACATTATAC+TGG | + | chr5.2:79390468-79390487 | None:intergenic | 35.0% | |
| GCAGGATATATAAAAAGGGT+TGG | - | chr5.2:79387859-79387878 | MS.gene81418:intron | 35.0% | |
| GGAAATAAGAAGCTCATTCT+TGG | - | chr5.2:79389282-79389301 | MS.gene81418:intron | 35.0% | |
| GTAATTTCAGATCCAACTTC+TGG | - | chr5.2:79387142-79387161 | MS.gene81418:intron | 35.0% | |
| GTACAGTGAAGATGAGATTA+GGG | - | chr5.2:79385444-79385463 | MS.gene81418:intron | 35.0% | |
| GTTGGAGAAATCACCATTAA+GGG | + | chr5.2:79390606-79390625 | None:intergenic | 35.0% | |
| TAATTGCAGAAGTTATTGGC+AGG | - | chr5.2:79387913-79387932 | MS.gene81418:intron | 35.0% | |
| TAATTGTAGAATTCTCTCGG+TGG | - | chr5.2:79385838-79385857 | MS.gene81418:intron | 35.0% | |
| TACAGTGAAGATGAGATTAG+GGG | - | chr5.2:79385445-79385464 | MS.gene81418:intron | 35.0% | |
| TATACCTCCATAATATCCTC+AGG | + | chr5.2:79390309-79390328 | None:intergenic | 35.0% | |
| TCAAAATAACTCATCACCGA+CGG | + | chr5.2:79390693-79390712 | None:intergenic | 35.0% | |
| TCGCTCAATTATTTCATCAC+AGG | - | chr5.2:79388670-79388689 | MS.gene81418:CDS | 35.0% | |
| TGCAATCAAGTCATAAGAGT+CGG | - | chr5.2:79389207-79389226 | MS.gene81418:intron | 35.0% | |
| TGGAAGGAAATAATTCCATG+TGG | + | chr5.2:79387620-79387639 | None:intergenic | 35.0% | |
| TGTACAGTGAAGATGAGATT+AGG | - | chr5.2:79385443-79385462 | MS.gene81418:intron | 35.0% | |
| TTCACCATAGGATTAGATAG+TGG | + | chr5.2:79388190-79388209 | None:intergenic | 35.0% | |
| TTGAAATGATTAGTGAACGG+TGG | - | chr5.2:79385922-79385941 | MS.gene81418:intron | 35.0% | |
| TTGCAGCCAGTATAATGTAT+TGG | - | chr5.2:79390459-79390478 | MS.gene81418:CDS | 35.0% | |
| TTGTCAACAAAGTAGGATGT+GGG | - | chr5.2:79385785-79385804 | MS.gene81418:intron | 35.0% | |
| ! | AATTTGAGATCTCATTCCCA+AGG | - | chr5.2:79389519-79389538 | MS.gene81418:intron | 35.0% |
| ! | AGTTCCTTTAAAAACAGCAG+AGG | + | chr5.2:79390109-79390128 | None:intergenic | 35.0% |
| ! | ATCTGAAATTACCAGTAGAG+TGG | + | chr5.2:79387134-79387153 | None:intergenic | 35.0% |
| ! | CACAAGATTTGCTCTTTCAT+TGG | + | chr5.2:79388562-79388581 | None:intergenic | 35.0% |
| ! | CTTTTATCGTGCATTTAACG+GGG | + | chr5.2:79389662-79389681 | None:intergenic | 35.0% |
| ! | GGATGAATTTTCATCTCCAA+AGG | - | chr5.2:79387398-79387417 | MS.gene81418:intron | 35.0% |
| ! | TATCTGTTTAAGTTAGAGGC+GGG | + | chr5.2:79385606-79385625 | None:intergenic | 35.0% |
| ! | TTCGGCAGCTTTTATATAGA+AGG | - | chr5.2:79385892-79385911 | MS.gene81418:intron | 35.0% |
| ! | TTTTTCCAGAATCGGTTAAC+TGG | - | chr5.2:79389133-79389152 | MS.gene81418:CDS | 35.0% |
| !! | GAAGATACTGACTCAAGAAT+GGG | + | chr5.2:79386491-79386510 | None:intergenic | 35.0% |
| !! | TGTATTTTAAGAGAAGGAGC+GGG | + | chr5.2:79388965-79388984 | None:intergenic | 35.0% |
| !!! | ACCTATGTTGCTTTTCTTTG+TGG | - | chr5.2:79385327-79385346 | MS.gene81418:CDS | 35.0% |
| !!! | ACGAGACGGAAGTTTTATTT+TGG | - | chr5.2:79386061-79386080 | MS.gene81418:CDS | 35.0% |
| !!! | ACTAGCCGATTTTTTGGTTT+TGG | + | chr5.2:79389384-79389403 | None:intergenic | 35.0% |
| !!! | ACTTCCTCTGCTGTTTTTAA+AGG | - | chr5.2:79390102-79390121 | MS.gene81418:intron | 35.0% |
| !!! | TATGTTGCTTTTCTTTGTGG+TGG | - | chr5.2:79385330-79385349 | MS.gene81418:CDS | 35.0% |
| !!! | TCTTTTTAGTATCGGTCGAT+AGG | + | chr5.2:79388807-79388826 | None:intergenic | 35.0% |
| AAACATACCACTTTGACCCT+TGG | + | chr5.2:79389823-79389842 | None:intergenic | 40.0% | |
| AAAGGGTTGGAAAACTCTGA+AGG | - | chr5.2:79387872-79387891 | MS.gene81418:intron | 40.0% | |
| AAATACTACATTCGAGCGTC+TGG | - | chr5.2:79385758-79385777 | MS.gene81418:intron | 40.0% | |
| AACCAAGCTACAACGAAACA+AGG | - | chr5.2:79386348-79386367 | MS.gene81418:CDS | 40.0% | |
| AAGGGTTGGAAAACTCTGAA+GGG | - | chr5.2:79387873-79387892 | MS.gene81418:intron | 40.0% | |
| ACAGTGAAGATGAGATTAGG+GGG | - | chr5.2:79385446-79385465 | MS.gene81418:intron | 40.0% | |
| ACTACACTCAAACAACCAAG+TGG | + | chr5.2:79386147-79386166 | None:intergenic | 40.0% | |
| ACTTTCATCTTCACCGCAAA+CGG | + | chr5.2:79390576-79390595 | None:intergenic | 40.0% | |
| AGAATCGGTTAACTGGAAAC+AGG | - | chr5.2:79389140-79389159 | MS.gene81418:CDS | 40.0% | |
| AGAGACTGTTGTATCAGAAG+TGG | + | chr5.2:79390645-79390664 | None:intergenic | 40.0% | |
| AGGATGTGGATCAATAGTCT+TGG | - | chr5.2:79388886-79388905 | MS.gene81418:intron | 40.0% | |
| ATCATGTGAAAAAGAAGGGC+TGG | - | chr5.2:79388015-79388034 | MS.gene81418:intron | 40.0% | |
| CAAAAGATGGCATTCTTCTG+TGG | - | chr5.2:79386547-79386566 | MS.gene81418:intron | 40.0% | |
| CAATTGGAACCTAGTTACCA+AGG | - | chr5.2:79389803-79389822 | MS.gene81418:intron | 40.0% | |
| CATCACTTATCTCCTTTCCT+TGG | + | chr5.2:79389539-79389558 | None:intergenic | 40.0% | |
| CCATACTCTATGCCTCAATT+CGG | - | chr5.2:79386755-79386774 | MS.gene81418:intron | 40.0% | |
| CGGTAACTATTGCGTTTGTA+TGG | + | chr5.2:79389846-79389865 | None:intergenic | 40.0% | |
| CTACACTCAAACAACCAAGT+GGG | + | chr5.2:79386146-79386165 | None:intergenic | 40.0% | |
| CTATCGCTCTTTCTCCTATT+TGG | - | chr5.2:79389954-79389973 | MS.gene81418:intron | 40.0% | |
| CTTCTTACTCCAGTTGAATC+CGG | + | chr5.2:79388068-79388087 | None:intergenic | 40.0% | |
| CTTGAGTCAGTATCTTCCTT+TGG | - | chr5.2:79386494-79386513 | MS.gene81418:intron | 40.0% | |
| CTTGTCAACAAAGTAGGATG+TGG | - | chr5.2:79385784-79385803 | MS.gene81418:intron | 40.0% | |
| GAAGTTCAACCTGTGTAAAC+TGG | + | chr5.2:79385205-79385224 | None:intergenic | 40.0% | |
| GCAAAAGATACTTGAGTGCA+AGG | - | chr5.2:79388607-79388626 | MS.gene81418:intron | 40.0% | |
| GCAATAGTTACCGTTGAGTT+TGG | - | chr5.2:79389853-79389872 | MS.gene81418:intron | 40.0% | |
| GCTTTCGTTAAGGAATGATG+AGG | + | chr5.2:79386388-79386407 | None:intergenic | 40.0% | |
| GGATGCACAGTTGTTAACAT+TGG | - | chr5.2:79386789-79386808 | MS.gene81418:intron | 40.0% | |
| GGCTTGATTGAAAGACAGAA+GGG | - | chr5.2:79388125-79388144 | MS.gene81418:intron | 40.0% | |
| GTAGAGAAGAGAGATGCTTT+AGG | - | chr5.2:79388866-79388885 | MS.gene81418:intron | 40.0% | |
| GTATTGAATTGTGTGTGTCG+TGG | - | chr5.2:79389402-79389421 | MS.gene81418:CDS | 40.0% | |
| GTCTCACATTCAGAGCTTTA+AGG | - | chr5.2:79389608-79389627 | MS.gene81418:intron | 40.0% | |
| GTTACCTGAGGATATTATGG+AGG | - | chr5.2:79390302-79390321 | MS.gene81418:intron | 40.0% | |
| TAGCTCATGCACTAAATCGA+TGG | - | chr5.2:79390184-79390203 | MS.gene81418:intron | 40.0% | |
| TCATTTGTAGCTGGATCCAA+AGG | + | chr5.2:79386513-79386532 | None:intergenic | 40.0% | |
| TGGCTTGATTGAAAGACAGA+AGG | - | chr5.2:79388124-79388143 | MS.gene81418:intron | 40.0% | |
| TGGTCACTTGTCAACAAAGT+AGG | - | chr5.2:79385778-79385797 | MS.gene81418:intron | 40.0% | |
| TGGTGAGACAACTTAACCAA+CGG | + | chr5.2:79387579-79387598 | None:intergenic | 40.0% | |
| TTATCAATGTTGCTGTGCCT+GGG | - | chr5.2:79386670-79386689 | MS.gene81418:CDS | 40.0% | |
| TTCTCACTAGTCAATGTAGC+TGG | - | chr5.2:79389243-79389262 | MS.gene81418:intron | 40.0% | |
| ! | AATTTTCATCTCCAAAGGGG+AGG | - | chr5.2:79387403-79387422 | MS.gene81418:intron | 40.0% |
| ! | ACGATTAGCGGATCAGAAAA+GGG | - | chr5.2:79386426-79386445 | MS.gene81418:intron | 40.0% |
| ! | ATTAAGATTTGAGGTGCCCT+CGG | + | chr5.2:79388640-79388659 | None:intergenic | 40.0% |
| ! | ATTAGGGCATTATGCAATGC+AGG | - | chr5.2:79388776-79388795 | MS.gene81418:intron | 40.0% |
| ! | CTCTTTTTCTTCCACTCTAC+TGG | - | chr5.2:79387120-79387139 | MS.gene81418:intron | 40.0% |
| ! | GTACAACTTTTGTTCACCGT+TGG | - | chr5.2:79387560-79387579 | MS.gene81418:intron | 40.0% |
| ! | TGCGACACTGATTATGTAAG+TGG | + | chr5.2:79390256-79390275 | None:intergenic | 40.0% |
| ! | TGGAATTTTCCTGCTACAGA+TGG | - | chr5.2:79389025-79389044 | MS.gene81418:intron | 40.0% |
| ! | TGTTTCCAGTTAACCGATTC+TGG | + | chr5.2:79389141-79389160 | None:intergenic | 40.0% |
| !! | AAGAGAGATGCTTTAGGATG+TGG | - | chr5.2:79388872-79388891 | MS.gene81418:intron | 40.0% |
| !! | GGAAGATACTGACTCAAGAA+TGG | + | chr5.2:79386492-79386511 | None:intergenic | 40.0% |
| !! | GGAAGTGATTTTGGTATGGA+AGG | + | chr5.2:79387636-79387655 | None:intergenic | 40.0% |
| !! | GGAATTGGTTGATGATAACC+AGG | - | chr5.2:79387199-79387218 | MS.gene81418:CDS | 40.0% |
| !! | GTTGGGAAGTGATTTTGGTA+TGG | + | chr5.2:79387640-79387659 | None:intergenic | 40.0% |
| !!! | ATTTTTTGGTGGAGATGCAG+AGG | - | chr5.2:79388093-79388112 | MS.gene81418:intron | 40.0% |
| !!! | TGCAGCCTCATCTTGTTTTA+GGG | - | chr5.2:79386935-79386954 | MS.gene81418:CDS | 40.0% |
| !!! | TTGCAGCCTCATCTTGTTTT+AGG | - | chr5.2:79386934-79386953 | MS.gene81418:CDS | 40.0% |
| !!! | TTTTTTGGTGGAGATGCAGA+GGG | - | chr5.2:79388094-79388113 | MS.gene81418:intron | 40.0% |
| AACATACCGAGTGTTCGGAA+GGG | + | chr5.2:79387663-79387682 | None:intergenic | 45.0% | |
| AACTTGCATCCATCTGTAGC+AGG | + | chr5.2:79389037-79389056 | None:intergenic | 45.0% | |
| ACCCTTCTTCACACGATTAG+CGG | - | chr5.2:79386414-79386433 | MS.gene81418:intron | 45.0% | |
| AGCAATTAGCCGGATTCAAC+TGG | - | chr5.2:79388056-79388075 | MS.gene81418:intron | 45.0% | |
| AGGGAAATGATTCCATACGG+TGG | - | chr5.2:79388144-79388163 | MS.gene81418:intron | 45.0% | |
| AGGTTCCAATTGACAACCCT+TGG | + | chr5.2:79389795-79389814 | None:intergenic | 45.0% | |
| AGTACGTGGAAACTCGGATT+TGG | - | chr5.2:79386164-79386183 | MS.gene81418:intron | 45.0% | |
| ATCCGCTAATCGTGTGAAGA+AGG | + | chr5.2:79386419-79386438 | None:intergenic | 45.0% | |
| CAAGCTACAACGAAACAAGG+AGG | - | chr5.2:79386351-79386370 | MS.gene81418:CDS | 45.0% | |
| CAGGATAAGAGCTTGTCAAG+TGG | - | chr5.2:79389735-79389754 | MS.gene81418:intron | 45.0% | |
| CCGAATTGAGGCATAGAGTA+TGG | + | chr5.2:79386758-79386777 | None:intergenic | 45.0% | |
| CGAATGAATCTCACTGATGG+TGG | + | chr5.2:79390336-79390355 | None:intergenic | 45.0% | |
| CGGATTCAACTGGAGTAAGA+AGG | - | chr5.2:79388066-79388085 | MS.gene81418:intron | 45.0% | |
| CTAGTTACCAAGGGTCAAAG+TGG | - | chr5.2:79389813-79389832 | MS.gene81418:intron | 45.0% | |
| CTCAATTCGGCTAAGGCTAT+TGG | - | chr5.2:79386768-79386787 | MS.gene81418:intron | 45.0% | |
| CTTATCAATGTTGCTGTGCC+TGG | - | chr5.2:79386669-79386688 | MS.gene81418:CDS | 45.0% | |
| CTTGAGCATGCAGAGAGAAT+GGG | - | chr5.2:79388582-79388601 | MS.gene81418:intron | 45.0% | |
| GAGATCTCATTCCCAAGGAA+AGG | - | chr5.2:79389524-79389543 | MS.gene81418:intron | 45.0% | |
| GAGTGTAGTACGTGGAAACT+CGG | - | chr5.2:79386158-79386177 | MS.gene81418:intron | 45.0% | |
| GCACATGAAGTCTCTCATTC+CGG | - | chr5.2:79387754-79387773 | MS.gene81418:intron | 45.0% | |
| GCTCACATAAACAGCTACCT+TGG | - | chr5.2:79386459-79386478 | MS.gene81418:intron | 45.0% | |
| GCTGGCAATGATATTGTGCA+AGG | - | chr5.2:79389261-79389280 | MS.gene81418:intron | 45.0% | |
| GCTTCAAAGCCAGTTTACAC+AGG | - | chr5.2:79385193-79385212 | MS.gene81418:CDS | 45.0% | |
| GGCATCTTTAGTATCCAAGG+TGG | + | chr5.2:79388541-79388560 | None:intergenic | 45.0% | |
| GGGAAATGATTCCATACGGT+GGG | - | chr5.2:79388145-79388164 | MS.gene81418:intron | 45.0% | |
| GGGTGGTTATGCTTTCGTTA+AGG | + | chr5.2:79386398-79386417 | None:intergenic | 45.0% | |
| GGTATCGTCAACACTCAAGT+TGG | + | chr5.2:79390624-79390643 | None:intergenic | 45.0% | |
| GGTATGTTCCGAATCACGAT+CGG | - | chr5.2:79387675-79387694 | MS.gene81418:intron | 45.0% | |
| GGTTGTTTGAGTGTAGTACG+TGG | - | chr5.2:79386150-79386169 | MS.gene81418:intron | 45.0% | |
| TAACATTGGCGCACAAGACT+TGG | - | chr5.2:79386803-79386822 | MS.gene81418:intron | 45.0% | |
| TAAGAAGACACCTCAGCTTG+TGG | - | chr5.2:79387178-79387197 | MS.gene81418:CDS | 45.0% | |
| TAGAGCCAAGGGTTGTCAAT+TGG | - | chr5.2:79389787-79389806 | MS.gene81418:intron | 45.0% | |
| TCAACCAATTCCACAAGCTG+AGG | + | chr5.2:79387191-79387210 | None:intergenic | 45.0% | |
| TCAAGAATGGGTCATCACCA+AGG | + | chr5.2:79386479-79386498 | None:intergenic | 45.0% | |
| TCCGCTAATCGTGTGAAGAA+GGG | + | chr5.2:79386418-79386437 | None:intergenic | 45.0% | |
| TCTATGCCTCAATTCGGCTA+AGG | - | chr5.2:79386761-79386780 | MS.gene81418:intron | 45.0% | |
| TCTTTAGTATCCAAGGTGGC+TGG | + | chr5.2:79388537-79388556 | None:intergenic | 45.0% | |
| TTCGGAACATACCGAGTGTT+CGG | + | chr5.2:79387668-79387687 | None:intergenic | 45.0% | |
| ! | AAGGGGTTGGGAAGTGATTT+TGG | + | chr5.2:79387645-79387664 | None:intergenic | 45.0% |
| ! | CAAGCTGAGGTGTCTTCTTA+AGG | + | chr5.2:79387178-79387197 | None:intergenic | 45.0% |
| ! | CAATAGCCTTAGCCGAATTG+AGG | + | chr5.2:79386770-79386789 | None:intergenic | 45.0% |
| ! | CAATGGCTTTTGAACCCACT+TGG | - | chr5.2:79386129-79386148 | MS.gene81418:intron | 45.0% |
| ! | CACGATTAGCGGATCAGAAA+AGG | - | chr5.2:79386425-79386444 | MS.gene81418:intron | 45.0% |
| ! | CACTTTGACCCTTGGTAACT+AGG | + | chr5.2:79389815-79389834 | None:intergenic | 45.0% |
| ! | CTCCTTGTTTCGTTGTAGCT+TGG | + | chr5.2:79386353-79386372 | None:intergenic | 45.0% |
| ! | GATAGTGGCACCACATTTGA+TGG | + | chr5.2:79388175-79388194 | None:intergenic | 45.0% |
| !! | AGAGAAGGTAATGGACGAGA+CGG | - | chr5.2:79386047-79386066 | MS.gene81418:CDS | 45.0% |
| !! | GGTGCCACTATCTAATCCTA+TGG | - | chr5.2:79388183-79388202 | MS.gene81418:intron | 45.0% |
| !! | TTTTCTGGTAACCTCCCCTT+TGG | + | chr5.2:79387417-79387436 | None:intergenic | 45.0% |
| !! | AAATGTAATAATAAATTAAA+AGG | + | chr5.2:79386301-79386320 | None:intergenic | 5.0% |
| !! | AATTATGAATTAATAAATTT+AGG | + | chr5.2:79390058-79390077 | None:intergenic | 5.0% |
| !!! | ACATTATTTATTTTATTAAT+GGG | - | chr5.2:79387052-79387071 | MS.gene81418:intron | 5.0% |
| ACATACCGAGTGTTCGGAAG+GGG | + | chr5.2:79387662-79387681 | None:intergenic | 50.0% | |
| AGTGCAAGGGACATTACCGA+GGG | - | chr5.2:79388621-79388640 | MS.gene81418:intron | 50.0% | |
| ATCAGTGTCGCACGAAAGCT+TGG | - | chr5.2:79390264-79390283 | MS.gene81418:intron | 50.0% | |
| ATCTTCACCGCAAACGGAAG+GGG | + | chr5.2:79390570-79390589 | None:intergenic | 50.0% | |
| CATCTTCACCGCAAACGGAA+GGG | + | chr5.2:79390571-79390590 | None:intergenic | 50.0% | |
| CGTTGTCTTCGGTCTGTTGT+TGG | + | chr5.2:79390490-79390509 | None:intergenic | 50.0% | |
| CTGTGAGAGCAGCAATTAGC+CGG | - | chr5.2:79388046-79388065 | MS.gene81418:intron | 50.0% | |
| GAACATACCGAGTGTTCGGA+AGG | + | chr5.2:79387664-79387683 | None:intergenic | 50.0% | |
| GACACCTCAGCTTGTGGAAT+TGG | - | chr5.2:79387184-79387203 | MS.gene81418:CDS | 50.0% | |
| GACTGCAATGTTCAGGAGCA+AGG | + | chr5.2:79388515-79388534 | None:intergenic | 50.0% | |
| GAGATGCAGAGGGTAGTGAA+TGG | - | chr5.2:79388104-79388123 | MS.gene81418:intron | 50.0% | |
| GCTAATCGTGTGAAGAAGGG+TGG | + | chr5.2:79386415-79386434 | None:intergenic | 50.0% | |
| GCTTGAGCATGCAGAGAGAA+TGG | - | chr5.2:79388581-79388600 | MS.gene81418:intron | 50.0% | |
| GGCATTATGCAATGCAGGAG+TGG | - | chr5.2:79388781-79388800 | MS.gene81418:intron | 50.0% | |
| GGCTAAGATCTGCCAGAAGT+TGG | + | chr5.2:79387157-79387176 | None:intergenic | 50.0% | |
| GGTGGGTGTACCATCAAATG+TGG | - | chr5.2:79388162-79388181 | MS.gene81418:intron | 50.0% | |
| TCATCTTCACCGCAAACGGA+AGG | + | chr5.2:79390572-79390591 | None:intergenic | 50.0% | |
| TCTCAGTGCAGTAGAGCCAA+GGG | - | chr5.2:79389776-79389795 | MS.gene81418:intron | 50.0% | |
| TTCTCAGTGCAGTAGAGCCA+AGG | - | chr5.2:79389775-79389794 | MS.gene81418:intron | 50.0% | |
| TTGGTTGTTTGCAGCACGCA+AGG | - | chr5.2:79387724-79387743 | MS.gene81418:intron | 50.0% | |
| ! | GATGATGGCCGATCGTGATT+CGG | + | chr5.2:79387686-79387705 | None:intergenic | 50.0% |
| ! | GGAGGGTGTAGCATCGAATA+TGG | + | chr5.2:79387599-79387618 | None:intergenic | 50.0% |
| ! | GTCAAGTGGACTCTTCTTCC+TGG | - | chr5.2:79389749-79389768 | MS.gene81418:intron | 50.0% |
| ! | TTGATGGTACACCCACCGTA+TGG | + | chr5.2:79388159-79388178 | None:intergenic | 50.0% |
| !! | GAATTTGATGGCGTTGCCGT+CGG | - | chr5.2:79390674-79390693 | MS.gene81418:CDS | 50.0% |
| !! | TTGGTAGTGAGAGTGCTAGC+AGG | + | chr5.2:79390527-79390546 | None:intergenic | 50.0% |
| ACATTGCAGTCCAGCCACCT+TGG | - | chr5.2:79388524-79388543 | MS.gene81418:intron | 55.0% | |
| CGGCTAATTGCTGCTCTCAC+AGG | + | chr5.2:79388048-79388067 | None:intergenic | 55.0% | |
| CTACTGCACTGAGAAGCTCC+AGG | + | chr5.2:79389770-79389789 | None:intergenic | 55.0% | |
| GAGTGCAAGGGACATTACCG+AGG | - | chr5.2:79388620-79388639 | MS.gene81418:intron | 55.0% | |
| GTGGCTGGACTGCAATGTTC+AGG | + | chr5.2:79388522-79388541 | None:intergenic | 55.0% | |
| TCATCCTGCGACAGTGGCAA+TGG | - | chr5.2:79387701-79387720 | MS.gene81418:intron | 55.0% | |
| TCGATGCTACACCCTCCACA+TGG | - | chr5.2:79387602-79387621 | MS.gene81418:intron | 55.0% | |
| TTGCCACTGTCGCAGGATGA+TGG | + | chr5.2:79387701-79387720 | None:intergenic | 55.0% | |
| ! | GGCGCACAAGACTTGGTTGA+CGG | - | chr5.2:79386810-79386829 | MS.gene81418:intron | 55.0% |
| !! | GTGAGAGTGCTAGCAGGTGA+AGG | + | chr5.2:79390521-79390540 | None:intergenic | 55.0% |
| ACCGAGTGTTCGGAAGGGGT+TGG | + | chr5.2:79387658-79387677 | None:intergenic | 60.0% | |
| AGGGGAAGCTTCGGGTGTGT+TGG | + | chr5.2:79390546-79390565 | None:intergenic | 60.0% | |
| CCAACCATTGCCACTGTCGC+AGG | + | chr5.2:79387708-79387727 | None:intergenic | 60.0% | |
| CCCAACCCCTTCCGAACACT+CGG | - | chr5.2:79387654-79387673 | MS.gene81418:intron | 60.0% | |
| CCGAGTGTTCGGAAGGGGTT+GGG | + | chr5.2:79387657-79387676 | None:intergenic | 60.0% | |
| CCTGCGACAGTGGCAATGGT+TGG | - | chr5.2:79387705-79387724 | MS.gene81418:intron | 60.0% | |
| GCTCGCTCGTCTATAGTCCC+AGG | + | chr5.2:79386690-79386709 | None:intergenic | 60.0% | |
| ACCGCAAACGGAAGGGGCAG+GGG | + | chr5.2:79390564-79390583 | None:intergenic | 65.0% | |
| CACCGCAAACGGAAGGGGCA+GGG | + | chr5.2:79390565-79390584 | None:intergenic | 65.0% | |
| CGGCCATCATCCTGCGACAG+TGG | - | chr5.2:79387695-79387714 | MS.gene81418:intron | 65.0% | |
| GAAGGGGCAGGGGAAGCTTC+GGG | + | chr5.2:79390554-79390573 | None:intergenic | 65.0% | |
| GGAAGGGGCAGGGGAAGCTT+CGG | + | chr5.2:79390555-79390574 | None:intergenic | 65.0% | |
| TCACCGCAAACGGAAGGGGC+AGG | + | chr5.2:79390566-79390585 | None:intergenic | 65.0% | |
| TCCCCTGCCCCTTCCGTTTG+CGG | - | chr5.2:79390560-79390579 | MS.gene81418:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 79385155 | 79390712 | 79385155 | ID=MS.gene81418 |
| chr5.2 | mRNA | 79385155 | 79390712 | 79385155 | ID=MS.gene81418.t1;Parent=MS.gene81418 |
| chr5.2 | exon | 79390626 | 79390712 | 79390626 | ID=MS.gene81418.t1.exon1;Parent=MS.gene81418.t1 |
| chr5.2 | CDS | 79390626 | 79390712 | 79390626 | ID=cds.MS.gene81418.t1;Parent=MS.gene81418.t1 |
| chr5.2 | exon | 79390339 | 79390509 | 79390339 | ID=MS.gene81418.t1.exon2;Parent=MS.gene81418.t1 |
| chr5.2 | CDS | 79390339 | 79390509 | 79390339 | ID=cds.MS.gene81418.t1;Parent=MS.gene81418.t1 |
| chr5.2 | exon | 79389299 | 79389537 | 79389299 | ID=MS.gene81418.t1.exon3;Parent=MS.gene81418.t1 |
| chr5.2 | CDS | 79389299 | 79389537 | 79389299 | ID=cds.MS.gene81418.t1;Parent=MS.gene81418.t1 |
| chr5.2 | exon | 79389031 | 79389202 | 79389031 | ID=MS.gene81418.t1.exon4;Parent=MS.gene81418.t1 |
| chr5.2 | CDS | 79389031 | 79389202 | 79389031 | ID=cds.MS.gene81418.t1;Parent=MS.gene81418.t1 |
| chr5.2 | exon | 79388889 | 79388927 | 79388889 | ID=MS.gene81418.t1.exon5;Parent=MS.gene81418.t1 |
| chr5.2 | CDS | 79388889 | 79388927 | 79388889 | ID=cds.MS.gene81418.t1;Parent=MS.gene81418.t1 |
| chr5.2 | exon | 79388647 | 79388715 | 79388647 | ID=MS.gene81418.t1.exon6;Parent=MS.gene81418.t1 |
| chr5.2 | CDS | 79388647 | 79388715 | 79388647 | ID=cds.MS.gene81418.t1;Parent=MS.gene81418.t1 |
| chr5.2 | exon | 79388402 | 79388518 | 79388402 | ID=MS.gene81418.t1.exon7;Parent=MS.gene81418.t1 |
| chr5.2 | CDS | 79388402 | 79388518 | 79388402 | ID=cds.MS.gene81418.t1;Parent=MS.gene81418.t1 |
| chr5.2 | exon | 79387176 | 79387387 | 79387176 | ID=MS.gene81418.t1.exon8;Parent=MS.gene81418.t1 |
| chr5.2 | CDS | 79387176 | 79387387 | 79387176 | ID=cds.MS.gene81418.t1;Parent=MS.gene81418.t1 |
| chr5.2 | exon | 79386914 | 79387069 | 79386914 | ID=MS.gene81418.t1.exon9;Parent=MS.gene81418.t1 |
| chr5.2 | CDS | 79386914 | 79387069 | 79386914 | ID=cds.MS.gene81418.t1;Parent=MS.gene81418.t1 |
| chr5.2 | exon | 79386564 | 79386763 | 79386564 | ID=MS.gene81418.t1.exon10;Parent=MS.gene81418.t1 |
| chr5.2 | CDS | 79386564 | 79386763 | 79386564 | ID=cds.MS.gene81418.t1;Parent=MS.gene81418.t1 |
| chr5.2 | exon | 79386238 | 79386395 | 79386238 | ID=MS.gene81418.t1.exon11;Parent=MS.gene81418.t1 |
| chr5.2 | CDS | 79386238 | 79386395 | 79386238 | ID=cds.MS.gene81418.t1;Parent=MS.gene81418.t1 |
| chr5.2 | exon | 79386033 | 79386129 | 79386033 | ID=MS.gene81418.t1.exon12;Parent=MS.gene81418.t1 |
| chr5.2 | CDS | 79386033 | 79386129 | 79386033 | ID=cds.MS.gene81418.t1;Parent=MS.gene81418.t1 |
| chr5.2 | exon | 79385544 | 79385635 | 79385544 | ID=MS.gene81418.t1.exon13;Parent=MS.gene81418.t1 |
| chr5.2 | CDS | 79385544 | 79385635 | 79385544 | ID=cds.MS.gene81418.t1;Parent=MS.gene81418.t1 |
| chr5.2 | exon | 79385155 | 79385433 | 79385155 | ID=MS.gene81418.t1.exon14;Parent=MS.gene81418.t1 |
| chr5.2 | CDS | 79385155 | 79385433 | 79385155 | ID=cds.MS.gene81418.t1;Parent=MS.gene81418.t1 |
| Gene Sequence |
| Protein sequence |
