Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38162.t1 | XP_003618022.1 | 99.5 | 666 | 3 | 0 | 1 | 666 | 1 | 666 | 0.00E+00 | 1247.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38162.t1 | Q9FKI0 | 76.4 | 656 | 153 | 1 | 1 | 656 | 1 | 654 | 7.0e-289 | 994.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38162.t1 | G7K508 | 99.5 | 666 | 3 | 0 | 1 | 666 | 1 | 666 | 0.0e+00 | 1247.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene38162 | 0.834002 | 3.85E-56 | -1.69E-46 |
| MS.gene049435 | MS.gene38162 | 0.805856 | 1.09E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene38162 | 0.84577 | 3.30E-59 | -1.69E-46 |
| MS.gene050227 | MS.gene38162 | 0.840829 | 6.87E-58 | -1.69E-46 |
| MS.gene050228 | MS.gene38162 | 0.845552 | 3.78E-59 | -1.69E-46 |
| MS.gene050303 | MS.gene38162 | 0.813948 | 1.98E-51 | -1.69E-46 |
| MS.gene050442 | MS.gene38162 | 0.837551 | 4.86E-57 | -1.69E-46 |
| MS.gene050623 | MS.gene38162 | -0.824649 | 7.20E-54 | -1.69E-46 |
| MS.gene050719 | MS.gene38162 | 0.838893 | 2.19E-57 | -1.69E-46 |
| MS.gene050721 | MS.gene38162 | 0.838101 | 3.51E-57 | -1.69E-46 |
| MS.gene050724 | MS.gene38162 | 0.830971 | 2.17E-55 | -1.69E-46 |
| MS.gene050780 | MS.gene38162 | 0.810333 | 1.21E-50 | -1.69E-46 |
| MS.gene051198 | MS.gene38162 | 0.801785 | 7.64E-49 | -1.69E-46 |
| MS.gene051757 | MS.gene38162 | 0.803184 | 3.93E-49 | -1.69E-46 |
| MS.gene052012 | MS.gene38162 | 0.800888 | 1.17E-48 | -1.69E-46 |
| MS.gene052020 | MS.gene38162 | 0.810454 | 1.14E-50 | -1.69E-46 |
| MS.gene052176 | MS.gene38162 | 0.816021 | 6.85E-52 | -1.69E-46 |
| MS.gene052323 | MS.gene38162 | 0.810841 | 9.43E-51 | -1.69E-46 |
| MS.gene052376 | MS.gene38162 | 0.800022 | 1.75E-48 | -1.69E-46 |
| MS.gene052426 | MS.gene38162 | 0.804828 | 1.79E-49 | -1.69E-46 |
| MS.gene052856 | MS.gene38162 | 0.843338 | 1.49E-58 | -1.69E-46 |
| MS.gene052858 | MS.gene38162 | 0.825839 | 3.77E-54 | -1.69E-46 |
| MS.gene052860 | MS.gene38162 | 0.825534 | 4.45E-54 | -1.69E-46 |
| MS.gene053079 | MS.gene38162 | 0.805394 | 1.36E-49 | -1.69E-46 |
| MS.gene05510 | MS.gene38162 | 0.834246 | 3.35E-56 | -1.69E-46 |
| MS.gene055222 | MS.gene38162 | 0.812254 | 4.65E-51 | -1.69E-46 |
| MS.gene055441 | MS.gene38162 | 0.800013 | 1.76E-48 | -1.69E-46 |
| MS.gene055623 | MS.gene38162 | 0.813207 | 2.88E-51 | -1.69E-46 |
| MS.gene056506 | MS.gene38162 | 0.837342 | 5.50E-57 | -1.69E-46 |
| MS.gene056552 | MS.gene38162 | 0.815625 | 8.40E-52 | -1.69E-46 |
| MS.gene057140 | MS.gene38162 | 0.814303 | 1.65E-51 | -1.69E-46 |
| MS.gene057360 | MS.gene38162 | 0.803037 | 4.22E-49 | -1.69E-46 |
| MS.gene05761 | MS.gene38162 | 0.815297 | 9.94E-52 | -1.69E-46 |
| MS.gene057869 | MS.gene38162 | 0.834783 | 2.45E-56 | -1.69E-46 |
| MS.gene057980 | MS.gene38162 | 0.804035 | 2.62E-49 | -1.69E-46 |
| MS.gene058084 | MS.gene38162 | 0.805555 | 1.26E-49 | -1.69E-46 |
| MS.gene058399 | MS.gene38162 | 0.806243 | 9.04E-50 | -1.69E-46 |
| MS.gene058906 | MS.gene38162 | 0.806967 | 6.36E-50 | -1.69E-46 |
| MS.gene059249 | MS.gene38162 | 0.826424 | 2.73E-54 | -1.69E-46 |
| MS.gene059317 | MS.gene38162 | 0.811097 | 8.30E-51 | -1.69E-46 |
| MS.gene059725 | MS.gene38162 | 0.82089 | 5.40E-53 | -1.69E-46 |
| MS.gene059830 | MS.gene38162 | 0.821312 | 4.32E-53 | -1.69E-46 |
| MS.gene060011 | MS.gene38162 | 0.801291 | 9.65E-49 | -1.69E-46 |
| MS.gene060084 | MS.gene38162 | 0.820201 | 7.77E-53 | -1.69E-46 |
| MS.gene060165 | MS.gene38162 | 0.803401 | 3.55E-49 | -1.69E-46 |
| MS.gene060297 | MS.gene38162 | 0.82502 | 5.89E-54 | -1.69E-46 |
| MS.gene060310 | MS.gene38162 | 0.805732 | 1.16E-49 | -1.69E-46 |
| MS.gene060619 | MS.gene38162 | 0.846091 | 2.70E-59 | -1.69E-46 |
| MS.gene060637 | MS.gene38162 | 0.847526 | 1.09E-59 | -1.69E-46 |
| MS.gene060683 | MS.gene38162 | 0.834252 | 3.34E-56 | -1.69E-46 |
| MS.gene060685 | MS.gene38162 | 0.830206 | 3.35E-55 | -1.69E-46 |
| MS.gene060802 | MS.gene38162 | 0.803755 | 3.00E-49 | -1.69E-46 |
| MS.gene060803 | MS.gene38162 | 0.822632 | 2.14E-53 | -1.69E-46 |
| MS.gene060998 | MS.gene38162 | 0.816239 | 6.13E-52 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38162.t1 | MTR_5g098130 | 99.550 | 666 | 3 | 0 | 1 | 666 | 1 | 666 | 0.0 | 1367 |
| MS.gene38162.t1 | MTR_5g098130 | 99.590 | 488 | 2 | 0 | 1 | 488 | 1 | 488 | 0.0 | 1006 |
| MS.gene38162.t1 | MTR_5g098130 | 23.789 | 227 | 153 | 4 | 405 | 617 | 146 | 366 | 1.22e-11 | 67.8 |
| MS.gene38162.t1 | MTR_5g094160 | 69.412 | 680 | 193 | 2 | 1 | 665 | 1 | 680 | 0.0 | 996 |
| MS.gene38162.t1 | MTR_8g011460 | 68.837 | 645 | 200 | 1 | 1 | 644 | 1 | 645 | 0.0 | 925 |
| MS.gene38162.t1 | MTR_7g052820 | 67.470 | 664 | 205 | 4 | 1 | 661 | 1 | 656 | 0.0 | 910 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38162.t1 | AT5G35700 | 79.116 | 656 | 135 | 2 | 1 | 656 | 1 | 654 | 0.0 | 1082 |
| MS.gene38162.t1 | AT2G04750 | 73.605 | 663 | 161 | 4 | 1 | 661 | 1 | 651 | 0.0 | 1003 |
| MS.gene38162.t1 | AT4G26700 | 68.833 | 677 | 194 | 4 | 1 | 661 | 1 | 676 | 0.0 | 956 |
| MS.gene38162.t1 | AT4G26700 | 68.833 | 677 | 194 | 4 | 1 | 661 | 1 | 676 | 0.0 | 956 |
| MS.gene38162.t1 | AT4G26700 | 68.833 | 677 | 194 | 4 | 1 | 661 | 1 | 676 | 0.0 | 956 |
| MS.gene38162.t1 | AT5G55400 | 67.249 | 687 | 193 | 7 | 1 | 658 | 1 | 684 | 0.0 | 947 |
| MS.gene38162.t1 | AT5G55400 | 67.249 | 687 | 193 | 7 | 1 | 658 | 1 | 684 | 0.0 | 947 |
| MS.gene38162.t1 | AT5G55400 | 67.249 | 687 | 193 | 7 | 1 | 658 | 1 | 684 | 0.0 | 947 |
| MS.gene38162.t1 | AT5G48460 | 66.261 | 658 | 216 | 3 | 1 | 656 | 1 | 654 | 0.0 | 903 |
| MS.gene38162.t1 | AT4G26700 | 72.077 | 573 | 158 | 2 | 1 | 572 | 1 | 572 | 0.0 | 864 |
| MS.gene38162.t1 | AT4G26700 | 72.077 | 573 | 158 | 2 | 1 | 572 | 1 | 572 | 0.0 | 864 |
| MS.gene38162.t1 | AT4G26700 | 72.077 | 573 | 158 | 2 | 1 | 572 | 1 | 572 | 0.0 | 864 |
| MS.gene38162.t1 | AT4G26700 | 71.961 | 510 | 127 | 3 | 167 | 661 | 19 | 527 | 0.0 | 755 |
| MS.gene38162.t1 | AT4G26700 | 24.336 | 226 | 153 | 5 | 146 | 366 | 256 | 468 | 2.28e-11 | 67.4 |
Find 128 sgRNAs with CRISPR-Local
Find 387 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCCTTCAATTTCTTGAAAA+TGG | 0.097004 | 5.3:-79328435 | None:intergenic |
| GCAGATGGGCCTGCAGTTTC+TGG | 0.145741 | 5.3:-79330941 | None:intergenic |
| TGTTTATTTGTAGCCTTATT+TGG | 0.199374 | 5.3:+79329801 | MS.gene38162:intron |
| CTTATTAATGTTGCTGTTCC+TGG | 0.208314 | 5.3:+79329550 | MS.gene38162:CDS |
| GAAGAAAACTCCTCAACTTT+TGG | 0.232213 | 5.3:+79330025 | MS.gene38162:CDS |
| GTGCAACAAATGCAAGATTA+AGG | 0.241539 | 5.3:-79331075 | None:intergenic |
| TCTTTCTGTCGGATCACTTA+TGG | 0.263323 | 5.3:-79330969 | None:intergenic |
| TTCCGAAATGGCATCTTTAT+AGG | 0.267092 | 5.3:-79331898 | None:intergenic |
| GAAGCTACAGGTGATGTTTC+TGG | 0.283137 | 5.3:-79334135 | None:intergenic |
| CTGATGCTGATATACTAAAC+TGG | 0.292071 | 5.3:+79333045 | MS.gene38162:CDS |
| TAATATTGGTACACAGGATA+TGG | 0.301639 | 5.3:+79329684 | MS.gene38162:CDS |
| CTCCATTTCAGATGTTCTTC+CGG | 0.303748 | 5.3:-79333090 | None:intergenic |
| CTCAATTCAGCAAAGGCTAT+TGG | 0.304700 | 5.3:+79329649 | MS.gene38162:CDS |
| GTGTTCTTGTTTCTGATCAA+TGG | 0.308745 | 5.3:+79328190 | MS.gene38162:CDS |
| GTCCTCAGGTAACAGGAAAA+TGG | 0.310800 | 5.3:-79333803 | None:intergenic |
| ATCAGACCAAGTACCAAATA+AGG | 0.331284 | 5.3:-79329814 | None:intergenic |
| CAGTTCTCCACTTTCCGAAA+TGG | 0.351333 | 5.3:-79331910 | None:intergenic |
| CTCCTATAAAGATGCCATTT+CGG | 0.357411 | 5.3:+79331896 | MS.gene38162:CDS |
| TTGTAGCCTTATTTGGTACT+TGG | 0.358094 | 5.3:+79329808 | MS.gene38162:intron |
| CGATTATGTCCTCAGGTAAC+AGG | 0.359547 | 5.3:-79333810 | None:intergenic |
| TCAATTCAGCAAAGGCTATT+GGG | 0.370233 | 5.3:+79329650 | MS.gene38162:CDS |
| GGAATTAGTGGAAGATGATA+AGG | 0.375109 | 5.3:+79330046 | MS.gene38162:CDS |
| ATAAAGTGAGTATCATCTTC+TGG | 0.378823 | 5.3:-79334062 | None:intergenic |
| ATTATCATCAATAGCTAAAT+CGG | 0.379443 | 5.3:-79334199 | None:intergenic |
| CGCACACATTAACAGTTACT+TGG | 0.389361 | 5.3:+79329337 | MS.gene38162:CDS |
| GGAAGAGTCGTATCAGAATA+TGG | 0.390337 | 5.3:+79328499 | MS.gene38162:CDS |
| ATCAGTGTTGCCAGAAAACT+TGG | 0.390508 | 5.3:+79333775 | MS.gene38162:CDS |
| GCCTTCAATTTCTTGAAAAT+GGG | 0.394045 | 5.3:-79328434 | None:intergenic |
| GACCCTTCAACTATGTCCTT+TGG | 0.396033 | 5.3:-79331046 | None:intergenic |
| TTTCTCCTGGATCTGTCAAT+TGG | 0.400696 | 5.3:+79331857 | MS.gene38162:CDS |
| GGGTGCACAGTGGTTAATAT+TGG | 0.401432 | 5.3:+79329670 | MS.gene38162:CDS |
| CTAAAGATGGAGTCCTGCTT+TGG | 0.403603 | 5.3:+79329426 | MS.gene38162:CDS |
| TGGAGCCAAGGGTGGTCAAC+TGG | 0.404329 | 5.3:+79333551 | MS.gene38162:CDS |
| GCATTTGTAGACGGATCAAT+TGG | 0.408423 | 5.3:-79329389 | None:intergenic |
| CGCTGATCATTTACCAAAGC+AGG | 0.410747 | 5.3:-79329439 | None:intergenic |
| TCCGACAGAAAGAGCAAATA+TGG | 0.413008 | 5.3:+79330979 | MS.gene38162:CDS |
| ACTGGAGTTTAGTTACTAAA+GGG | 0.417956 | 5.3:+79333569 | MS.gene38162:CDS |
| ATCAGTAATCTCTTTACCTT+GGG | 0.422621 | 5.3:-79333027 | None:intergenic |
| AAGAAAGATGCTTCAGACTC+TGG | 0.423959 | 5.3:+79331643 | MS.gene38162:CDS |
| GGGAATAAGAAGCTCTTACT+AGG | 0.424845 | 5.3:+79332006 | MS.gene38162:CDS |
| CATTTCAATAAAACCTTGTC+CGG | 0.427856 | 5.3:-79330217 | None:intergenic |
| TCTATTAGAAGTTCTTGATA+AGG | 0.431418 | 5.3:+79331834 | MS.gene38162:CDS |
| TGTATCTGAAAGAACTCAAT+CGG | 0.434854 | 5.3:+79328385 | MS.gene38162:CDS |
| TTAATTCGACTTGAGTGAAC+TGG | 0.435059 | 5.3:-79328221 | None:intergenic |
| GGATGAGATTAAGGCTGTAT+TGG | 0.438071 | 5.3:+79328478 | MS.gene38162:CDS |
| AGCCGGAAGAACATCTGAAA+TGG | 0.438304 | 5.3:+79333088 | MS.gene38162:CDS |
| AACTGGAGTTTAGTTACTAA+AGG | 0.442884 | 5.3:+79333568 | MS.gene38162:CDS |
| CATTTACTAAGGAAAAGTTT+AGG | 0.445102 | 5.3:-79331960 | None:intergenic |
| AAAAGTAACCATACCTATGC+TGG | 0.448298 | 5.3:-79331105 | None:intergenic |
| CAAACTCGAGCTGCAGCAAA+AGG | 0.449356 | 5.3:+79329224 | MS.gene38162:CDS |
| CATAACCAGCTTTCTTCAAG+TGG | 0.460935 | 5.3:-79330249 | None:intergenic |
| TTGTTTGATCTTGCTAAAGA+TGG | 0.461184 | 5.3:+79329413 | MS.gene38162:CDS |
| CATCAGTAATCTCTTTACCT+TGG | 0.462922 | 5.3:-79333028 | None:intergenic |
| TGCTTCCAATTGACAGATCC+AGG | 0.463406 | 5.3:-79331862 | None:intergenic |
| AGCGAGCCATTAACACAAAA+CGG | 0.464056 | 5.3:+79329584 | MS.gene38162:CDS |
| AGCAAATATGGTTCTTGAGC+AGG | 0.464906 | 5.3:+79330991 | MS.gene38162:CDS |
| TTATTAATGTTGCTGTTCCT+GGG | 0.467543 | 5.3:+79329551 | MS.gene38162:CDS |
| GTTCTTGATAAGGTTTCTCC+TGG | 0.467901 | 5.3:+79331844 | MS.gene38162:CDS |
| GTTACCAGCAACATTTACTA+AGG | 0.474649 | 5.3:-79331971 | None:intergenic |
| CTGAATTGAGGCCAAGGGTG+TGG | 0.475848 | 5.3:-79329636 | None:intergenic |
| AATTTCCACTTGAAGAAAGC+TGG | 0.477622 | 5.3:+79330244 | MS.gene38162:CDS |
| ACCATATTTGCTCTTTCTGT+CGG | 0.484244 | 5.3:-79330980 | None:intergenic |
| AAATTTCTCATCTGATGTAA+AGG | 0.484697 | 5.3:+79330285 | MS.gene38162:CDS |
| TCACTTATGGTCAAGGCAGA+TGG | 0.486966 | 5.3:-79330956 | None:intergenic |
| ACAAATGCAAGATTAAGGTT+AGG | 0.489655 | 5.3:-79331070 | None:intergenic |
| AAACTCCAGTTGACCACCCT+TGG | 0.493668 | 5.3:-79333556 | None:intergenic |
| AAAGATGCCATTTCGGAAAG+TGG | 0.495109 | 5.3:+79331903 | MS.gene38162:CDS |
| CAATCGGGTCGTGTTGTTGT+GGG | 0.495264 | 5.3:+79328401 | MS.gene38162:CDS |
| TCGCCATCTGCTGAAGCTAC+AGG | 0.496898 | 5.3:-79334147 | None:intergenic |
| CAATAGCCTTTGCTGAATTG+AGG | 0.498086 | 5.3:-79329648 | None:intergenic |
| TCTGATTTCACAAATAATCA+AGG | 0.499124 | 5.3:+79329831 | MS.gene38162:CDS |
| TTCAATTTCTTGAAAATGGG+AGG | 0.499738 | 5.3:-79328431 | None:intergenic |
| GCTGGTAACGATATTGTTCA+AGG | 0.500025 | 5.3:+79331985 | MS.gene38162:CDS |
| AGACTCTGGATCAACAGTCT+TGG | 0.504040 | 5.3:+79331657 | MS.gene38162:CDS |
| TCAATCGGGTCGTGTTGTTG+TGG | 0.506562 | 5.3:+79328400 | MS.gene38162:CDS |
| ACTCCAAAGGACATAGTTGA+AGG | 0.507026 | 5.3:+79331043 | MS.gene38162:CDS |
| CACTTATGGTCAAGGCAGAT+GGG | 0.511464 | 5.3:-79330955 | None:intergenic |
| ATCTGAAATGGAGAGTTTCA+AGG | 0.513085 | 5.3:+79333100 | MS.gene38162:CDS |
| CGAAATGGCATCTTTATAGG+AGG | 0.519018 | 5.3:-79331895 | None:intergenic |
| TTAGTTACTAAAGGGGAGAC+TGG | 0.520211 | 5.3:+79333577 | MS.gene38162:CDS |
| TGGATCTGTCAATTGGAAGC+AGG | 0.522518 | 5.3:+79331864 | MS.gene38162:CDS |
| GCGAGCCATTAACACAAAAC+GGG | 0.525388 | 5.3:+79329585 | MS.gene38162:CDS |
| GACAAAATGGCAGGATGTGG+AGG | 0.537970 | 5.3:+79330177 | MS.gene38162:intron |
| TCCACTAATTCCAAAAGTTG+AGG | 0.538135 | 5.3:-79330035 | None:intergenic |
| TTTGAGCGCTGTGGAGCCAA+GGG | 0.539077 | 5.3:+79333540 | MS.gene38162:CDS |
| CTGATGATGCACAGACATCT+CGG | 0.539124 | 5.3:+79331619 | MS.gene38162:CDS |
| TATCTGCTAGCATCATGTAC+TGG | 0.540376 | 5.3:+79334082 | MS.gene38162:CDS |
| GGTACACAGGATATGGTTGA+AGG | 0.543260 | 5.3:+79329691 | MS.gene38162:CDS |
| CTCAAGGAAGAAAATTCCGT+TGG | 0.548350 | 5.3:-79333515 | None:intergenic |
| CAAAACGGGATCTTAATCCA+TGG | 0.551814 | 5.3:+79329599 | MS.gene38162:CDS |
| TGATGATGCACAGACATCTC+GGG | 0.552373 | 5.3:+79331620 | MS.gene38162:CDS |
| CTTACCTCGATTATGTCCTC+AGG | 0.553465 | 5.3:-79333817 | None:intergenic |
| TGCAATTAATGAATCTGAGA+AGG | 0.554719 | 5.3:+79329304 | MS.gene38162:CDS |
| GCTCTTGCTCCAGAAACTGC+AGG | 0.556106 | 5.3:+79330932 | MS.gene38162:CDS |
| CAACTATGTCCTTTGGAGTG+AGG | 0.559053 | 5.3:-79331039 | None:intergenic |
| GCTCGCTCATCTATTGTCCC+AGG | 0.564121 | 5.3:-79329568 | None:intergenic |
| CCACAGCGCTCAAAAGCTCA+AGG | 0.565969 | 5.3:-79333531 | None:intergenic |
| TGTCGGATCACTTATGGTCA+AGG | 0.567674 | 5.3:-79330963 | None:intergenic |
| TTCAATAAAACCTTGTCCGG+TGG | 0.569867 | 5.3:-79330214 | None:intergenic |
| TCACCTGTAGCTTCAGCAGA+TGG | 0.571305 | 5.3:+79334144 | MS.gene38162:CDS |
| TATCAGTTTACCACCGGACA+AGG | 0.571953 | 5.3:+79330204 | MS.gene38162:CDS |
| AATAACAAAGTGAAGAAAGC+CGG | 0.571985 | 5.3:+79333071 | MS.gene38162:CDS |
| GAGCGCTGTGGAGCCAAGGG+TGG | 0.578582 | 5.3:+79333543 | MS.gene38162:CDS |
| CCTTTGCTGAATTGAGGCCA+AGG | 0.582536 | 5.3:-79329642 | None:intergenic |
| ACTGCCAGCTTAAGGAGAGT+TGG | 0.583296 | 5.3:-79334235 | None:intergenic |
| ATCAGTCATCATCTCAGCGA+AGG | 0.585154 | 5.3:-79331601 | None:intergenic |
| CAGGATAAGAATCTTTCCAA+CGG | 0.585427 | 5.3:+79333499 | MS.gene38162:intron |
| AGGAATGAAAACCACACCCT+TGG | 0.586456 | 5.3:+79329625 | MS.gene38162:CDS |
| CGAGCTGCAGCAAAAGGTGG+CGG | 0.589232 | 5.3:+79329230 | MS.gene38162:CDS |
| TCAAACAATGCATTTGTAGA+CGG | 0.593212 | 5.3:-79329398 | None:intergenic |
| GGAGCTTATCAGTTTACCAC+CGG | 0.595643 | 5.3:+79330198 | MS.gene38162:CDS |
| GTATCTGAAAGAACTCAATC+GGG | 0.598331 | 5.3:+79328386 | MS.gene38162:CDS |
| TGATGCTGATATACTAAACT+GGG | 0.599993 | 5.3:+79333046 | MS.gene38162:CDS |
| CTGGTAACGATATTGTTCAA+GGG | 0.602831 | 5.3:+79331986 | MS.gene38162:CDS |
| AAAAGAGCTCACCCTAAGGA+AGG | 0.609760 | 5.3:-79328543 | None:intergenic |
| CTTTGCTGAATTGAGGCCAA+GGG | 0.610450 | 5.3:-79329641 | None:intergenic |
| ACTCGAGCTGCAGCAAAAGG+TGG | 0.613169 | 5.3:+79329227 | MS.gene38162:CDS |
| CTGGAGTTTAGTTACTAAAG+GGG | 0.614933 | 5.3:+79333570 | MS.gene38162:CDS |
| GGGATCTTAATCCATGGGAG+AGG | 0.619723 | 5.3:+79329605 | MS.gene38162:CDS |
| AGTGGTTAATATTGGTACAC+AGG | 0.622990 | 5.3:+79329678 | MS.gene38162:CDS |
| AAAACGGGATCTTAATCCAT+GGG | 0.623930 | 5.3:+79329600 | MS.gene38162:CDS |
| TGAAACAGATTTAGTCAATG+AGG | 0.625097 | 5.3:+79334173 | MS.gene38162:CDS |
| CTCCAAAGGACATAGTTGAA+GGG | 0.634932 | 5.3:+79331044 | MS.gene38162:CDS |
| CCTTGGCCTCAATTCAGCAA+AGG | 0.637065 | 5.3:+79329642 | MS.gene38162:CDS |
| CAAGAGATACCTCACTCCAA+AGG | 0.644053 | 5.3:+79331030 | MS.gene38162:CDS |
| AACTTGAGATCACACTCCCA+AGG | 0.664816 | 5.3:+79333011 | MS.gene38162:CDS |
| GTTACCTGAGGACATAATCG+AGG | 0.704443 | 5.3:+79333813 | MS.gene38162:CDS |
| AAAGGCTATTGGGTGCACAG+TGG | 0.746180 | 5.3:+79329660 | MS.gene38162:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTATTTTCTTTTTTC+AGG | + | chr5.3:79333480-79333499 | MS.gene38162:intron | 10.0% |
| !!! | TTATACATTAAGAATATTTT+GGG | + | chr5.3:79331165-79331184 | MS.gene38162:intron | 10.0% |
| !!! | TTTATACATTAAGAATATTT+TGG | + | chr5.3:79331164-79331183 | MS.gene38162:intron | 10.0% |
| !! | AATAAATCTAAAAAATGTGT+TGG | - | chr5.3:79333462-79333481 | None:intergenic | 15.0% |
| !! | TAAATAAAATGAACCAATAA+GGG | - | chr5.3:79331445-79331464 | None:intergenic | 15.0% |
| !! | TTATTTGTAAGTAACTTTAT+AGG | + | chr5.3:79329137-79329156 | MS.gene38162:intron | 15.0% |
| !!! | ATTCATAATATAAACTGTTT+TGG | - | chr5.3:79333197-79333216 | None:intergenic | 15.0% |
| !!! | TATACATTAAGAATATTTTG+GGG | + | chr5.3:79331166-79331185 | MS.gene38162:intron | 15.0% |
| !!! | TCATTTTATTTACATTTACT+GGG | + | chr5.3:79331453-79331472 | MS.gene38162:intron | 15.0% |
| !!! | TTCATTTTATTTACATTTAC+TGG | + | chr5.3:79331452-79331471 | MS.gene38162:intron | 15.0% |
| !!! | TTTTCAGATTTATGATAAAT+CGG | + | chr5.3:79332042-79332061 | MS.gene38162:intron | 15.0% |
| !! | AATAAAGTATGGTATAATCT+AGG | - | chr5.3:79333981-79334000 | None:intergenic | 20.0% |
| !! | AATAGAATTGATCTTATGTT+TGG | - | chr5.3:79329465-79329484 | None:intergenic | 20.0% |
| !! | ATCATGTAAATATATAATGC+TGG | + | chr5.3:79330389-79330408 | MS.gene38162:intron | 20.0% |
| !! | ATGAAATAACAAGAACATAT+CGG | - | chr5.3:79332164-79332183 | None:intergenic | 20.0% |
| !! | ATGAATAATAGAAATCAGAA+TGG | - | chr5.3:79329914-79329933 | None:intergenic | 20.0% |
| !! | ATTATCATCAATAGCTAAAT+CGG | - | chr5.3:79334202-79334221 | None:intergenic | 20.0% |
| !! | GGTTCAATGAAAAAATTAAA+AGG | - | chr5.3:79331769-79331788 | None:intergenic | 20.0% |
| !! | GTAAATAAAATGAACCAATA+AGG | - | chr5.3:79331446-79331465 | None:intergenic | 20.0% |
| !! | TATACTAAGATATAATGAAC+CGG | - | chr5.3:79331313-79331332 | None:intergenic | 20.0% |
| !! | TATATAATATAACATAGCTC+CGG | + | chr5.3:79330451-79330470 | MS.gene38162:intron | 20.0% |
| !! | TCATGTAAATATATAATGCT+GGG | + | chr5.3:79330390-79330409 | MS.gene38162:intron | 20.0% |
| !! | TGTTATAAAATCAACTTCAA+TGG | + | chr5.3:79333926-79333945 | MS.gene38162:intron | 20.0% |
| !! | TGTTCATTTGAAAAATAGAA+GGG | + | chr5.3:79328857-79328876 | MS.gene38162:intron | 20.0% |
| !! | TTCTGATTTCTATTATTCAT+TGG | + | chr5.3:79329914-79329933 | MS.gene38162:intron | 20.0% |
| !!! | AAAGCTTTAGAATAAAGAAA+AGG | + | chr5.3:79333378-79333397 | MS.gene38162:intron | 20.0% |
| !!! | CAAAAGTATACTTTCAAATT+AGG | - | chr5.3:79329077-79329096 | None:intergenic | 20.0% |
| !!! | CATTAAATTTTGAAACTGAT+GGG | + | chr5.3:79332633-79332652 | MS.gene38162:intron | 20.0% |
| !!! | TTATTTCTTTTTTCACAGAT+GGG | + | chr5.3:79331810-79331829 | MS.gene38162:intron | 20.0% |
| ! | AAATTTCTCATCTGATGTAA+AGG | + | chr5.3:79330285-79330304 | MS.gene38162:CDS | 25.0% |
| ! | ACTGTTCAATGTTTAACAAA+GGG | + | chr5.3:79333401-79333420 | MS.gene38162:intron | 25.0% |
| ! | AGGCCAATAAAAAAAATTAG+AGG | - | chr5.3:79331252-79331271 | None:intergenic | 25.0% |
| ! | ATAGAAGAAATAGTACGTAA+TGG | + | chr5.3:79328624-79328643 | MS.gene38162:intron | 25.0% |
| ! | ATCTATAATGTTACAGAAGA+AGG | - | chr5.3:79332559-79332578 | None:intergenic | 25.0% |
| ! | ATGAAAAGGAAAGAATATCA+CGG | - | chr5.3:79330116-79330135 | None:intergenic | 25.0% |
| ! | ATGGTTAAAAACGATGATAA+AGG | - | chr5.3:79332811-79332830 | None:intergenic | 25.0% |
| ! | ATTTAGTAAATCAGAACAAC+AGG | - | chr5.3:79330660-79330679 | None:intergenic | 25.0% |
| ! | CAATGATCAAGAAATCAAAA+TGG | - | chr5.3:79328307-79328326 | None:intergenic | 25.0% |
| ! | CATCTGTGAAAAAAGAAATA+AGG | - | chr5.3:79331811-79331830 | None:intergenic | 25.0% |
| ! | CATGTATGCATATTATCTTA+AGG | + | chr5.3:79333166-79333185 | MS.gene38162:intron | 25.0% |
| ! | CATTTACTAAGGAAAAGTTT+AGG | - | chr5.3:79331963-79331982 | None:intergenic | 25.0% |
| ! | CTATAACTAAGAACAAAAAG+AGG | - | chr5.3:79332489-79332508 | None:intergenic | 25.0% |
| ! | CTCTATTATATAGAAACAGA+GGG | + | chr5.3:79328762-79328781 | MS.gene38162:intron | 25.0% |
| ! | CTTCATATGTTATGACAAAA+TGG | + | chr5.3:79330164-79330183 | MS.gene38162:intron | 25.0% |
| ! | GAAATATTATAACCGAAGAA+TGG | + | chr5.3:79332661-79332680 | MS.gene38162:intron | 25.0% |
| ! | GCAACCAAGTTATAAAAATT+GGG | + | chr5.3:79331932-79331951 | MS.gene38162:CDS | 25.0% |
| ! | GCATTTGCATATATCATATT+TGG | + | chr5.3:79333248-79333267 | MS.gene38162:intron | 25.0% |
| ! | GTGTTCATTTGAAAAATAGA+AGG | + | chr5.3:79328856-79328875 | MS.gene38162:intron | 25.0% |
| ! | GTTAAAAAAACTGTCTTTCT+AGG | + | chr5.3:79332514-79332533 | MS.gene38162:intron | 25.0% |
| ! | GTTCATTTGAAAAATAGAAG+GGG | + | chr5.3:79328858-79328877 | MS.gene38162:intron | 25.0% |
| ! | GTTTCATTTAAGCAAAACTA+AGG | + | chr5.3:79328794-79328813 | MS.gene38162:intron | 25.0% |
| ! | TATAACTGAAGATAACCAAT+AGG | + | chr5.3:79332137-79332156 | MS.gene38162:intron | 25.0% |
| ! | TCCAAAAAAAGATACTCAAA+AGG | - | chr5.3:79331272-79331291 | None:intergenic | 25.0% |
| ! | TCTATTAGAAGTTCTTGATA+AGG | + | chr5.3:79331834-79331853 | MS.gene38162:CDS | 25.0% |
| ! | TCTGATTTCACAAATAATCA+AGG | + | chr5.3:79329831-79329850 | MS.gene38162:CDS | 25.0% |
| ! | TCTTCTGTAACATTATAGAT+GGG | + | chr5.3:79332559-79332578 | MS.gene38162:intron | 25.0% |
| ! | TGAAATAACAAGAACATATC+GGG | - | chr5.3:79332163-79332182 | None:intergenic | 25.0% |
| ! | TGCAACCAAGTTATAAAAAT+TGG | + | chr5.3:79331931-79331950 | MS.gene38162:CDS | 25.0% |
| ! | TGGTTAAAAACGATGATAAA+GGG | - | chr5.3:79332810-79332829 | None:intergenic | 25.0% |
| ! | TTATGATAAATCGGTATTGT+TGG | + | chr5.3:79332051-79332070 | MS.gene38162:intron | 25.0% |
| ! | TTCTTCTGTAACATTATAGA+TGG | + | chr5.3:79332558-79332577 | MS.gene38162:intron | 25.0% |
| ! | TTTAAGTCTGTCAAAATTCA+GGG | - | chr5.3:79329754-79329773 | None:intergenic | 25.0% |
| ! | TTTAGTAAATCAGAACAACA+GGG | - | chr5.3:79330659-79330678 | None:intergenic | 25.0% |
| !! | ACCTTTTCCCAATAAAAAAA+AGG | - | chr5.3:79331224-79331243 | None:intergenic | 25.0% |
| !! | ATTGAATACTTTCTTTTTGC+AGG | + | chr5.3:79330880-79330899 | MS.gene38162:intron | 25.0% |
| !! | ATTTTTCCAACAAATAAGAG+TGG | + | chr5.3:79328830-79328849 | MS.gene38162:intron | 25.0% |
| !! | TATATTAGACCTTATTTCCA+TGG | + | chr5.3:79332226-79332245 | MS.gene38162:intron | 25.0% |
| !! | TTATGTCAATAATGTTTTCG+AGG | + | chr5.3:79331689-79331708 | MS.gene38162:CDS | 25.0% |
| !! | TTTCTCTTTAGGAAAAAAAG+AGG | + | chr5.3:79331380-79331399 | MS.gene38162:intron | 25.0% |
| !! | TTTTGTCATAACATATGAAG+AGG | - | chr5.3:79330164-79330183 | None:intergenic | 25.0% |
| !!! | AAGTTCTTCTTCATTTTTGA+AGG | + | chr5.3:79329259-79329278 | MS.gene38162:CDS | 25.0% |
| !!! | AGTATCTTTTTTTGGATGAA+GGG | + | chr5.3:79331276-79331295 | MS.gene38162:intron | 25.0% |
| !!! | CTCTGTTTCTATATAATAGA+GGG | - | chr5.3:79328763-79328782 | None:intergenic | 25.0% |
| !!! | CTTATTTCTTTTTTCACAGA+TGG | + | chr5.3:79331809-79331828 | MS.gene38162:intron | 25.0% |
| !!! | GCATTAAATTTTGAAACTGA+TGG | + | chr5.3:79332632-79332651 | MS.gene38162:intron | 25.0% |
| !!! | GCTCCTCTAATTTTTTTTAT+TGG | + | chr5.3:79331246-79331265 | MS.gene38162:intron | 25.0% |
| !!! | GCTGAGAAATTTTATTTTTG+TGG | + | chr5.3:79334003-79334022 | MS.gene38162:intron | 25.0% |
| !!! | GTCATATGCTATTTTGATTT+AGG | + | chr5.3:79328693-79328712 | MS.gene38162:intron | 25.0% |
| !!! | TCCTTTGCCTTTTTTTTATT+GGG | + | chr5.3:79331214-79331233 | MS.gene38162:intron | 25.0% |
| !!! | TCTGTTTCTATATAATAGAG+GGG | - | chr5.3:79328762-79328781 | None:intergenic | 25.0% |
| !!! | TGTTCTTGTTATTTCATACA+AGG | + | chr5.3:79332167-79332186 | MS.gene38162:intron | 25.0% |
| !!! | TGTTTATTTGTAGCCTTATT+TGG | + | chr5.3:79329801-79329820 | MS.gene38162:intron | 25.0% |
| !!! | TTCCTTTGCCTTTTTTTTAT+TGG | + | chr5.3:79331213-79331232 | MS.gene38162:intron | 25.0% |
| AACTGGAGTTTAGTTACTAA+AGG | + | chr5.3:79333568-79333587 | MS.gene38162:CDS | 30.0% | |
| AATAACAAAGTGAAGAAAGC+CGG | + | chr5.3:79333071-79333090 | MS.gene38162:CDS | 30.0% | |
| AATATCAGTATACTCAGAAC+TGG | - | chr5.3:79333144-79333163 | None:intergenic | 30.0% | |
| ACAAATGCAAGATTAAGGTT+AGG | - | chr5.3:79331073-79331092 | None:intergenic | 30.0% | |
| ACTAAGAACAAAAAGAGGAA+AGG | - | chr5.3:79332484-79332503 | None:intergenic | 30.0% | |
| ACTGGAGTTTAGTTACTAAA+GGG | + | chr5.3:79333569-79333588 | MS.gene38162:CDS | 30.0% | |
| AGATGTAAACAGATACAACA+TGG | + | chr5.3:79330830-79330849 | MS.gene38162:intron | 30.0% | |
| AGCCTTCAATTTCTTGAAAA+TGG | - | chr5.3:79328438-79328457 | None:intergenic | 30.0% | |
| ATAAAGTGAGTATCATCTTC+TGG | - | chr5.3:79334065-79334084 | None:intergenic | 30.0% | |
| ATATGTTATGACAAAATGGC+AGG | + | chr5.3:79330168-79330187 | MS.gene38162:intron | 30.0% | |
| ATCAGTAATCTCTTTACCTT+GGG | - | chr5.3:79333030-79333049 | None:intergenic | 30.0% | |
| ATGAGAAGTTACTGAAAAGT+AGG | + | chr5.3:79332408-79332427 | MS.gene38162:intron | 30.0% | |
| ATGGCATACATATCACATAA+TGG | + | chr5.3:79331415-79331434 | MS.gene38162:intron | 30.0% | |
| ATGTCAATAAATAAGCTACC+AGG | - | chr5.3:79329179-79329198 | None:intergenic | 30.0% | |
| ATTTAAGCAAAACTAAGGTG+AGG | + | chr5.3:79328799-79328818 | MS.gene38162:intron | 30.0% | |
| ATTTATTGACATTGAGTGGT+AGG | + | chr5.3:79329187-79329206 | MS.gene38162:intron | 30.0% | |
| CATTTCAATAAAACCTTGTC+CGG | - | chr5.3:79330220-79330239 | None:intergenic | 30.0% | |
| CCAAGTTATAAAAATTGGGA+AGG | + | chr5.3:79331936-79331955 | MS.gene38162:CDS | 30.0% | |
| CCTCTATTATATAGAAACAG+AGG | + | chr5.3:79328761-79328780 | MS.gene38162:intron | 30.0% | |
| CTGTTCAATGTTTAACAAAG+GGG | + | chr5.3:79333402-79333421 | MS.gene38162:intron | 30.0% | |
| GACTGTTCAATGTTTAACAA+AGG | + | chr5.3:79333400-79333419 | MS.gene38162:intron | 30.0% | |
| GCCTTCAATTTCTTGAAAAT+GGG | - | chr5.3:79328437-79328456 | None:intergenic | 30.0% | |
| GCTTATTTATTGACATTGAG+TGG | + | chr5.3:79329183-79329202 | MS.gene38162:intron | 30.0% | |
| GTATGCATATTATCTTAAGG+CGG | + | chr5.3:79333169-79333188 | MS.gene38162:intron | 30.0% | |
| GTTTAAGTCTGTCAAAATTC+AGG | - | chr5.3:79329755-79329774 | None:intergenic | 30.0% | |
| TAATATTGGTACACAGGATA+TGG | + | chr5.3:79329684-79329703 | MS.gene38162:CDS | 30.0% | |
| TAGACTAGAACTTTCTCTTT+AGG | + | chr5.3:79331369-79331388 | MS.gene38162:intron | 30.0% | |
| TAGAGTTAGGAAATGTATAG+AGG | + | chr5.3:79331503-79331522 | MS.gene38162:intron | 30.0% | |
| TCAAACAATGCATTTGTAGA+CGG | - | chr5.3:79329401-79329420 | None:intergenic | 30.0% | |
| TCATCTTATGCAAGTGAAAA+TGG | - | chr5.3:79329874-79329893 | None:intergenic | 30.0% | |
| TCCATGAAAAATCAACTTCA+TGG | + | chr5.3:79333884-79333903 | MS.gene38162:intron | 30.0% | |
| TCCCAATAAAAAAAAGGCAA+AGG | - | chr5.3:79331218-79331237 | None:intergenic | 30.0% | |
| TGAAACAGATTTAGTCAATG+AGG | + | chr5.3:79334173-79334192 | MS.gene38162:CDS | 30.0% | |
| TGAACTGTAGAATGAAATTG+AGG | + | chr5.3:79330588-79330607 | MS.gene38162:intron | 30.0% | |
| TGATGCTGATATACTAAACT+GGG | + | chr5.3:79333046-79333065 | MS.gene38162:CDS | 30.0% | |
| TGATTTCTTGATCATTGATG+AGG | + | chr5.3:79328310-79328329 | MS.gene38162:intron | 30.0% | |
| TGCAATTAATGAATCTGAGA+AGG | + | chr5.3:79329304-79329323 | MS.gene38162:CDS | 30.0% | |
| TGGAAAGACTTCTTAACTTA+TGG | + | chr5.3:79329934-79329953 | MS.gene38162:intron | 30.0% | |
| TGGCATACATATCACATAAT+GGG | + | chr5.3:79331416-79331435 | MS.gene38162:intron | 30.0% | |
| TGTATCTGAAAGAACTCAAT+CGG | + | chr5.3:79328385-79328404 | MS.gene38162:CDS | 30.0% | |
| TTAAGTCTGTCAAAATTCAG+GGG | - | chr5.3:79329753-79329772 | None:intergenic | 30.0% | |
| TTAGTAAATCAGAACAACAG+GGG | - | chr5.3:79330658-79330677 | None:intergenic | 30.0% | |
| TTCAATTTCTTGAAAATGGG+AGG | - | chr5.3:79328434-79328453 | None:intergenic | 30.0% | |
| TTGTTTGATCTTGCTAAAGA+TGG | + | chr5.3:79329413-79329432 | MS.gene38162:CDS | 30.0% | |
| TTTAAGCAAAACTAAGGTGA+GGG | + | chr5.3:79328800-79328819 | MS.gene38162:intron | 30.0% | |
| TTTGATTCAAATGTCTGTGT+GGG | + | chr5.3:79329100-79329119 | MS.gene38162:intron | 30.0% | |
| ! | AAATTAAAAGGCAGAAGTAC+AGG | - | chr5.3:79331757-79331776 | None:intergenic | 30.0% |
| ! | AATACTTTCTTTTTGCAGGA+TGG | + | chr5.3:79330884-79330903 | MS.gene38162:intron | 30.0% |
| ! | AGTTAGCTTCAATTTCTTGA+AGG | - | chr5.3:79333621-79333640 | None:intergenic | 30.0% |
| ! | ATAAAATTGCAGTTTCGAGT+TGG | - | chr5.3:79332375-79332394 | None:intergenic | 30.0% |
| ! | ATTTTCACTTGCATAAGATG+AGG | + | chr5.3:79329873-79329892 | MS.gene38162:intron | 30.0% |
| ! | ATTTTGCATTTAACCTTGAC+AGG | + | chr5.3:79334035-79334054 | MS.gene38162:intron | 30.0% |
| ! | CCTTCCCAATTTTTATAACT+TGG | - | chr5.3:79331939-79331958 | None:intergenic | 30.0% |
| ! | TCTTTAGGAAAAAAAGAGGA+CGG | + | chr5.3:79331384-79331403 | MS.gene38162:intron | 30.0% |
| ! | TTATTAATGTTGCTGTTCCT+GGG | + | chr5.3:79329551-79329570 | MS.gene38162:CDS | 30.0% |
| ! | TTGTCTGTCTTTTCATTCTT+TGG | + | chr5.3:79329967-79329986 | MS.gene38162:intron | 30.0% |
| ! | TTTTACTGAGGATGAGATTA+AGG | + | chr5.3:79328469-79328488 | MS.gene38162:CDS | 30.0% |
| ! | TTTTCACTTGCATAAGATGA+GGG | + | chr5.3:79329874-79329893 | MS.gene38162:intron | 30.0% |
| ! | TTTTCCTTAGTAAATGTTGC+TGG | + | chr5.3:79331967-79331986 | MS.gene38162:CDS | 30.0% |
| ! | TTTTTCATTGAACCAACTAC+TGG | + | chr5.3:79331775-79331794 | MS.gene38162:intron | 30.0% |
| !! | ACCATGAAGTTGATTTTTCA+TGG | - | chr5.3:79333888-79333907 | None:intergenic | 30.0% |
| !! | CCTCTGTTTCTATATAATAG+AGG | - | chr5.3:79328764-79328783 | None:intergenic | 30.0% |
| !! | GCCTTTTGAGTATCTTTTTT+TGG | + | chr5.3:79331268-79331287 | MS.gene38162:intron | 30.0% |
| !! | TCCCATTTTCAAGAAATTGA+AGG | + | chr5.3:79328433-79328452 | MS.gene38162:CDS | 30.0% |
| !! | TTTTGATTCAAATGTCTGTG+TGG | + | chr5.3:79329099-79329118 | MS.gene38162:intron | 30.0% |
| !!! | CTTCATGGTTTTGTTAAGTT+TGG | + | chr5.3:79333899-79333918 | MS.gene38162:intron | 30.0% |
| !!! | GAGTATCTTTTTTTGGATGA+AGG | + | chr5.3:79331275-79331294 | MS.gene38162:intron | 30.0% |
| !!! | GCCTTTTTTTTATTGGGAAA+AGG | + | chr5.3:79331220-79331239 | MS.gene38162:intron | 30.0% |
| AAAACGGGATCTTAATCCAT+GGG | + | chr5.3:79329600-79329619 | MS.gene38162:CDS | 35.0% | |
| AAAACTACTGAACACTGTCA+AGG | - | chr5.3:79330720-79330739 | None:intergenic | 35.0% | |
| AAAAGTAACCATACCTATGC+TGG | - | chr5.3:79331108-79331127 | None:intergenic | 35.0% | |
| AAGGACAGCAGAAGATAAAA+AGG | - | chr5.3:79330701-79330720 | None:intergenic | 35.0% | |
| AATTTCCACTTGAAGAAAGC+TGG | + | chr5.3:79330244-79330263 | MS.gene38162:CDS | 35.0% | |
| ACCATATTTGCTCTTTCTGT+CGG | - | chr5.3:79330983-79331002 | None:intergenic | 35.0% | |
| ACTCATAGTACTTCAGGATT+TGG | + | chr5.3:79330551-79330570 | MS.gene38162:intron | 35.0% | |
| ACTGTAGAATGAAATTGAGG+AGG | + | chr5.3:79330591-79330610 | MS.gene38162:intron | 35.0% | |
| AGGACAGCAGAAGATAAAAA+GGG | - | chr5.3:79330700-79330719 | None:intergenic | 35.0% | |
| AGTAGTGCAGTTATAGAGTT+AGG | + | chr5.3:79331490-79331509 | MS.gene38162:intron | 35.0% | |
| AGTGGTTAATATTGGTACAC+AGG | + | chr5.3:79329678-79329697 | MS.gene38162:CDS | 35.0% | |
| ATCAGACCAAGTACCAAATA+AGG | - | chr5.3:79329817-79329836 | None:intergenic | 35.0% | |
| ATCTGATTTACTCACAGACT+AGG | + | chr5.3:79332709-79332728 | MS.gene38162:intron | 35.0% | |
| ATTGTGGCTTTCATTTCTGT+AGG | + | chr5.3:79331547-79331566 | MS.gene38162:intron | 35.0% | |
| ATTTGCACTTATCTACTACG+AGG | - | chr5.3:79328905-79328924 | None:intergenic | 35.0% | |
| CAGGATAAGAATCTTTCCAA+CGG | + | chr5.3:79333499-79333518 | MS.gene38162:intron | 35.0% | |
| CATCACTTGCTTTCTTAACA+TGG | + | chr5.3:79330496-79330515 | MS.gene38162:intron | 35.0% | |
| CATCAGTAATCTCTTTACCT+TGG | - | chr5.3:79333031-79333050 | None:intergenic | 35.0% | |
| CATGTTAAGAAAGCAAGTGA+TGG | - | chr5.3:79330498-79330517 | None:intergenic | 35.0% | |
| CTAAATCAGTGAAGAAACTG+TGG | + | chr5.3:79330674-79330693 | MS.gene38162:intron | 35.0% | |
| CTGATGCTGATATACTAAAC+TGG | + | chr5.3:79333045-79333064 | MS.gene38162:CDS | 35.0% | |
| CTGATTACTGAATCATTGTG+TGG | + | chr5.3:79330777-79330796 | MS.gene38162:intron | 35.0% | |
| CTGGAGTTTAGTTACTAAAG+GGG | + | chr5.3:79333570-79333589 | MS.gene38162:CDS | 35.0% | |
| GCTTTCATTTCTGTAGGAAT+GGG | + | chr5.3:79331553-79331572 | MS.gene38162:intron | 35.0% | |
| GGAAGATGATAAGGTGATAT+TGG | + | chr5.3:79330055-79330074 | MS.gene38162:intron | 35.0% | |
| GGAATTAGTGGAAGATGATA+AGG | + | chr5.3:79330046-79330065 | MS.gene38162:CDS | 35.0% | |
| GGTATTATCTATACTGAACC+TGG | + | chr5.3:79329158-79329177 | MS.gene38162:intron | 35.0% | |
| GTATCTGAAAGAACTCAATC+GGG | + | chr5.3:79328386-79328405 | MS.gene38162:CDS | 35.0% | |
| GTGCAACAAATGCAAGATTA+AGG | - | chr5.3:79331078-79331097 | None:intergenic | 35.0% | |
| GTTACCAGCAACATTTACTA+AGG | - | chr5.3:79331974-79331993 | None:intergenic | 35.0% | |
| GTTAGGAAATGTATAGAGGA+CGG | + | chr5.3:79331507-79331526 | MS.gene38162:intron | 35.0% | |
| TAGGCTCTTAATCCATTCTT+CGG | - | chr5.3:79332676-79332695 | None:intergenic | 35.0% | |
| TATATAATAGAGGGGAGATG+CGG | - | chr5.3:79328754-79328773 | None:intergenic | 35.0% | |
| TATGCAAGTGAAAATGGAGT+AGG | - | chr5.3:79329868-79329887 | None:intergenic | 35.0% | |
| TCAATTCAGCAAAGGCTATT+GGG | + | chr5.3:79329650-79329669 | MS.gene38162:CDS | 35.0% | |
| TCAGATCTTACCTCTCAAAT+AGG | - | chr5.3:79332695-79332714 | None:intergenic | 35.0% | |
| TCCACTAATTCCAAAAGTTG+AGG | - | chr5.3:79330038-79330057 | None:intergenic | 35.0% | |
| TGTCATCTAAGCATACATCA+GGG | - | chr5.3:79328667-79328686 | None:intergenic | 35.0% | |
| TTAAGCAAAACTAAGGTGAG+GGG | + | chr5.3:79328801-79328820 | MS.gene38162:intron | 35.0% | |
| TTCAGTAATCAGCATGTTAC+AGG | - | chr5.3:79330769-79330788 | None:intergenic | 35.0% | |
| TTCCGAAATGGCATCTTTAT+AGG | - | chr5.3:79331901-79331920 | None:intergenic | 35.0% | |
| TTTACTGGGAACAAGTATCT+AGG | + | chr5.3:79331467-79331486 | MS.gene38162:intron | 35.0% | |
| TTTAGGAAAAAAAGAGGACG+GGG | + | chr5.3:79331386-79331405 | MS.gene38162:intron | 35.0% | |
| TTTCTCAGCGCAATAAAGTA+TGG | - | chr5.3:79333992-79334011 | None:intergenic | 35.0% | |
| TTTGAAAAATAGAAGGGGTG+TGG | + | chr5.3:79328863-79328882 | MS.gene38162:intron | 35.0% | |
| TTTGTGTATTCTACACACAC+CGG | - | chr5.3:79330473-79330492 | None:intergenic | 35.0% | |
| ! | AAAAAGCGCGTAAACGAAAA+AGG | - | chr5.3:79328584-79328603 | None:intergenic | 35.0% |
| ! | AAAAGCGCGTAAACGAAAAA+GGG | - | chr5.3:79328583-79328602 | None:intergenic | 35.0% |
| ! | AAGAGAAAGTTCTAGTCTAG+TGG | - | chr5.3:79331368-79331387 | None:intergenic | 35.0% |
| ! | AAGATCCCGTTTTGTGTTAA+TGG | - | chr5.3:79329593-79329612 | None:intergenic | 35.0% |
| ! | AATGGAACATCCAAGTTTTC+TGG | - | chr5.3:79333788-79333807 | None:intergenic | 35.0% |
| ! | ATAAAGGGAGAGAAAGGTAT+AGG | - | chr5.3:79332795-79332814 | None:intergenic | 35.0% |
| ! | ATCTGAAATGGAGAGTTTCA+AGG | + | chr5.3:79333100-79333119 | MS.gene38162:CDS | 35.0% |
| ! | ATTGAACCAACTACTGGTTA+TGG | + | chr5.3:79331781-79331800 | MS.gene38162:intron | 35.0% |
| ! | CAAATTTTCCAGCATAGGTA+TGG | + | chr5.3:79331097-79331116 | MS.gene38162:intron | 35.0% |
| ! | CAAGAAATTGAAGGCTTTTG+CGG | + | chr5.3:79328442-79328461 | MS.gene38162:CDS | 35.0% |
| ! | CACTAACCACTCTTATTTGT+TGG | - | chr5.3:79328839-79328858 | None:intergenic | 35.0% |
| ! | CTCCTATAAAGATGCCATTT+CGG | + | chr5.3:79331896-79331915 | MS.gene38162:CDS | 35.0% |
| ! | CTGGTAACGATATTGTTCAA+GGG | + | chr5.3:79331986-79332005 | MS.gene38162:CDS | 35.0% |
| ! | CTTATTAATGTTGCTGTTCC+TGG | + | chr5.3:79329550-79329569 | MS.gene38162:CDS | 35.0% |
| ! | CTTTAGGAAAAAAAGAGGAC+GGG | + | chr5.3:79331385-79331404 | MS.gene38162:intron | 35.0% |
| ! | GAAGAAAACTCCTCAACTTT+TGG | + | chr5.3:79330025-79330044 | MS.gene38162:CDS | 35.0% |
| ! | TCTAAGACTCATAGTACTTC+AGG | + | chr5.3:79330545-79330564 | MS.gene38162:intron | 35.0% |
| ! | TGAGTTTTTGTGAAGCCTTA+AGG | - | chr5.3:79332752-79332771 | None:intergenic | 35.0% |
| ! | TGTTTTCTTCAGAATTCAGC+AGG | - | chr5.3:79334110-79334129 | None:intergenic | 35.0% |
| ! | TTAATTCGACTTGAGTGAAC+TGG | - | chr5.3:79328224-79328243 | None:intergenic | 35.0% |
| ! | TTGAAAAATAGAAGGGGTGT+GGG | + | chr5.3:79328864-79328883 | MS.gene38162:intron | 35.0% |
| ! | TTGCACAAATTTTCCAGCAT+AGG | + | chr5.3:79331092-79331111 | MS.gene38162:CDS | 35.0% |
| ! | TTTACTCACAGACTAGGTTT+TGG | + | chr5.3:79332715-79332734 | MS.gene38162:intron | 35.0% |
| ! | TTTTGCGGAGTTTTTTACTG+AGG | + | chr5.3:79328457-79328476 | MS.gene38162:CDS | 35.0% |
| !! | GTGTTCTTGTTTCTGATCAA+TGG | + | chr5.3:79328190-79328209 | MS.gene38162:CDS | 35.0% |
| !! | GTTTTTCAGAAGTTGAAGCA+TGG | - | chr5.3:79332994-79333013 | None:intergenic | 35.0% |
| !! | TGATTTTGAGTCCTTCCTTA+GGG | + | chr5.3:79328532-79328551 | MS.gene38162:CDS | 35.0% |
| !! | TTGATTTTGAGTCCTTCCTT+AGG | + | chr5.3:79328531-79328550 | MS.gene38162:CDS | 35.0% |
| !! | TTGTAGCCTTATTTGGTACT+TGG | + | chr5.3:79329808-79329827 | MS.gene38162:intron | 35.0% |
| !! | TTTTCGAGGATGTCAGAAAT+GGG | + | chr5.3:79331703-79331722 | MS.gene38162:CDS | 35.0% |
| !!! | CGGACAAGGTTTTATTGAAA+TGG | + | chr5.3:79330218-79330237 | MS.gene38162:CDS | 35.0% |
| !!! | GCATAGGTATGGTTACTTTT+AGG | + | chr5.3:79331108-79331127 | MS.gene38162:intron | 35.0% |
| !!! | TAGGTATGGTTACTTTTAGG+AGG | + | chr5.3:79331111-79331130 | MS.gene38162:intron | 35.0% |
| !!! | TCCTCAACTTTTGGAATTAG+TGG | + | chr5.3:79330034-79330053 | MS.gene38162:CDS | 35.0% |
| !!! | TTTGTCCAACAGCTTTTTTG+TGG | + | chr5.3:79332952-79332971 | MS.gene38162:intron | 35.0% |
| AAAGGCAAAGGAAAAGTAGC+AGG | - | chr5.3:79331206-79331225 | None:intergenic | 40.0% | |
| AAGAAAGATGCTTCAGACTC+TGG | + | chr5.3:79331643-79331662 | MS.gene38162:CDS | 40.0% | |
| AAGGAAAAGTAGCAGGTTCT+TGG | - | chr5.3:79331199-79331218 | None:intergenic | 40.0% | |
| ACGATGATAAAGGGAGAGAA+AGG | - | chr5.3:79332801-79332820 | None:intergenic | 40.0% | |
| ACTCCAAAGGACATAGTTGA+AGG | + | chr5.3:79331043-79331062 | MS.gene38162:CDS | 40.0% | |
| AGCAAATATGGTTCTTGAGC+AGG | + | chr5.3:79330991-79331010 | MS.gene38162:CDS | 40.0% | |
| AGCGAGCCATTAACACAAAA+CGG | + | chr5.3:79329584-79329603 | MS.gene38162:CDS | 40.0% | |
| AGGAACTGTGTGTCTGTATT+AGG | + | chr5.3:79332428-79332447 | MS.gene38162:intron | 40.0% | |
| AGGACAAATGTGAACAGGAA+AGG | - | chr5.3:79331737-79331756 | None:intergenic | 40.0% | |
| AGTACAGGACAAATGTGAAC+AGG | - | chr5.3:79331742-79331761 | None:intergenic | 40.0% | |
| ATCAGTGTTGCCAGAAAACT+TGG | + | chr5.3:79333775-79333794 | MS.gene38162:CDS | 40.0% | |
| ATGAAGGGCTTCTTAGTATC+CGG | + | chr5.3:79331291-79331310 | MS.gene38162:intron | 40.0% | |
| CAAAACGGGATCTTAATCCA+TGG | + | chr5.3:79329599-79329618 | MS.gene38162:CDS | 40.0% | |
| CAAAGCACACGCAAACATAT+CGG | - | chr5.3:79332082-79332101 | None:intergenic | 40.0% | |
| CAATAGCCTTTGCTGAATTG+AGG | - | chr5.3:79329651-79329670 | None:intergenic | 40.0% | |
| CATAACCAGCTTTCTTCAAG+TGG | - | chr5.3:79330252-79330271 | None:intergenic | 40.0% | |
| CGAAATGGCATCTTTATAGG+AGG | - | chr5.3:79331898-79331917 | None:intergenic | 40.0% | |
| CGCACACATTAACAGTTACT+TGG | + | chr5.3:79329337-79329356 | MS.gene38162:CDS | 40.0% | |
| CTACACTCACCATGGAAATA+AGG | - | chr5.3:79332238-79332257 | None:intergenic | 40.0% | |
| CTCAAGGAAGAAAATTCCGT+TGG | - | chr5.3:79333518-79333537 | None:intergenic | 40.0% | |
| CTCAATTCAGCAAAGGCTAT+TGG | + | chr5.3:79329649-79329668 | MS.gene38162:CDS | 40.0% | |
| CTCATCTGATGTAAAGGTGA+GGG | + | chr5.3:79330291-79330310 | MS.gene38162:intron | 40.0% | |
| CTCCAAAGGACATAGTTGAA+GGG | + | chr5.3:79331044-79331063 | MS.gene38162:CDS | 40.0% | |
| CTCCATTTCAGATGTTCTTC+CGG | - | chr5.3:79333093-79333112 | None:intergenic | 40.0% | |
| GACATTCTTGTATGTTCTCG+TGG | - | chr5.3:79328929-79328948 | None:intergenic | 40.0% | |
| GCATTTGTAGACGGATCAAT+TGG | - | chr5.3:79329392-79329411 | None:intergenic | 40.0% | |
| GCTTCAATTTCTTGAAGGTG+TGG | - | chr5.3:79333616-79333635 | None:intergenic | 40.0% | |
| GGAAATCCATAACCAGTAGT+TGG | - | chr5.3:79331790-79331809 | None:intergenic | 40.0% | |
| GGAAGAGTCGTATCAGAATA+TGG | + | chr5.3:79328499-79328518 | MS.gene38162:CDS | 40.0% | |
| GGATGAGATTAAGGCTGTAT+TGG | + | chr5.3:79328478-79328497 | MS.gene38162:CDS | 40.0% | |
| GGATTAAGAGCCTATTTGAG+AGG | + | chr5.3:79332682-79332701 | MS.gene38162:intron | 40.0% | |
| GGCTTTCATTTCTGTAGGAA+TGG | + | chr5.3:79331552-79331571 | MS.gene38162:intron | 40.0% | |
| GGGAATAAGAAGCTCTTACT+AGG | + | chr5.3:79332006-79332025 | MS.gene38162:CDS | 40.0% | |
| GTGTCATCTAAGCATACATC+AGG | - | chr5.3:79328668-79328687 | None:intergenic | 40.0% | |
| GTTCTTGATAAGGTTTCTCC+TGG | + | chr5.3:79331844-79331863 | MS.gene38162:CDS | 40.0% | |
| TAGATAACGCATGGGAAACA+GGG | - | chr5.3:79332898-79332917 | None:intergenic | 40.0% | |
| TATCGAACGTATGCTATGTG+AGG | - | chr5.3:79330811-79330830 | None:intergenic | 40.0% | |
| TATCTGCTAGCATCATGTAC+TGG | + | chr5.3:79334082-79334101 | MS.gene38162:CDS | 40.0% | |
| TATGACAAAATGGCAGGATG+TGG | + | chr5.3:79330174-79330193 | MS.gene38162:intron | 40.0% | |
| TCCGACAGAAAGAGCAAATA+TGG | + | chr5.3:79330979-79330998 | MS.gene38162:CDS | 40.0% | |
| TCCTATGCTAGATAACGCAT+GGG | - | chr5.3:79332906-79332925 | None:intergenic | 40.0% | |
| TCTATAGCTGATGGAGATTG+TGG | + | chr5.3:79331531-79331550 | MS.gene38162:intron | 40.0% | |
| TCTCATCTGATGTAAAGGTG+AGG | + | chr5.3:79330290-79330309 | MS.gene38162:intron | 40.0% | |
| TCTTTCTGTCGGATCACTTA+TGG | - | chr5.3:79330972-79330991 | None:intergenic | 40.0% | |
| TGTGACGAAGTTCTGTTGAT+TGG | + | chr5.3:79332586-79332605 | MS.gene38162:intron | 40.0% | |
| TTAGTTACTAAAGGGGAGAC+TGG | + | chr5.3:79333577-79333596 | MS.gene38162:CDS | 40.0% | |
| TTCAATAAAACCTTGTCCGG+TGG | - | chr5.3:79330217-79330236 | None:intergenic | 40.0% | |
| TTCTACATCTACACTCACCA+TGG | - | chr5.3:79332246-79332265 | None:intergenic | 40.0% | |
| TTTCAAATCGAAACACCGCA+TGG | + | chr5.3:79332346-79332365 | MS.gene38162:intron | 40.0% | |
| TTTCTCCTGGATCTGTCAAT+TGG | + | chr5.3:79331857-79331876 | MS.gene38162:CDS | 40.0% | |
| ! | AAAGATGCCATTTCGGAAAG+TGG | + | chr5.3:79331903-79331922 | MS.gene38162:CDS | 40.0% |
| ! | CGCAGTTCTGACAAATGAAA+AGG | - | chr5.3:79330130-79330149 | None:intergenic | 40.0% |
| ! | GCTGGTAACGATATTGTTCA+AGG | + | chr5.3:79331985-79332004 | MS.gene38162:CDS | 40.0% |
| ! | GGAGAGAAAGGTATAGGATA+GGG | - | chr5.3:79332789-79332808 | None:intergenic | 40.0% |
| ! | TTCCATTTTCCTGTTACCTG+AGG | + | chr5.3:79333801-79333820 | MS.gene38162:CDS | 40.0% |
| ! | TTTCTTTTTGCAGGATGGAG+AGG | + | chr5.3:79330889-79330908 | MS.gene38162:intron | 40.0% |
| ! | TTTTGTGAAGCCTTAAGGCA+GGG | - | chr5.3:79332747-79332766 | None:intergenic | 40.0% |
| ! | TTTTTGTGAAGCCTTAAGGC+AGG | - | chr5.3:79332748-79332767 | None:intergenic | 40.0% |
| !! | AACATGGTTCTAAATTGCGC+GGG | + | chr5.3:79330846-79330865 | MS.gene38162:intron | 40.0% |
| !! | ACATAATGGGTCACCCTTAT+TGG | + | chr5.3:79331429-79331448 | MS.gene38162:intron | 40.0% |
| !! | CAACATGGTTCTAAATTGCG+CGG | + | chr5.3:79330845-79330864 | MS.gene38162:intron | 40.0% |
| !! | GTTTTCGAGGATGTCAGAAA+TGG | + | chr5.3:79331702-79331721 | MS.gene38162:CDS | 40.0% |
| AAAAGAGCTCACCCTAAGGA+AGG | - | chr5.3:79328546-79328565 | None:intergenic | 45.0% | |
| AACTTGAGATCACACTCCCA+AGG | + | chr5.3:79333011-79333030 | MS.gene38162:CDS | 45.0% | |
| AGACTCTGGATCAACAGTCT+TGG | + | chr5.3:79331657-79331676 | MS.gene38162:CDS | 45.0% | |
| AGATAACGCATGGGAAACAG+GGG | - | chr5.3:79332897-79332916 | None:intergenic | 45.0% | |
| AGCCGGAAGAACATCTGAAA+TGG | + | chr5.3:79333088-79333107 | MS.gene38162:CDS | 45.0% | |
| AGCTGCCACAAAAAAGCTGT+TGG | - | chr5.3:79332960-79332979 | None:intergenic | 45.0% | |
| AGGAATGAAAACCACACCCT+TGG | + | chr5.3:79329625-79329644 | MS.gene38162:CDS | 45.0% | |
| ATCAGTCATCATCTCAGCGA+AGG | - | chr5.3:79331604-79331623 | None:intergenic | 45.0% | |
| CAAGAACATATCGGGCCTAT+TGG | - | chr5.3:79332155-79332174 | None:intergenic | 45.0% | |
| CAAGAGATACCTCACTCCAA+AGG | + | chr5.3:79331030-79331049 | MS.gene38162:CDS | 45.0% | |
| CACTTATGGTCAAGGCAGAT+GGG | - | chr5.3:79330958-79330977 | None:intergenic | 45.0% | |
| CAGTTCTCCACTTTCCGAAA+TGG | - | chr5.3:79331913-79331932 | None:intergenic | 45.0% | |
| CGAAAAAAGAGCTCACCCTA+AGG | - | chr5.3:79328550-79328569 | None:intergenic | 45.0% | |
| CGATTATGTCCTCAGGTAAC+AGG | - | chr5.3:79333813-79333832 | None:intergenic | 45.0% | |
| CGCTGATCATTTACCAAAGC+AGG | - | chr5.3:79329442-79329461 | None:intergenic | 45.0% | |
| CTAAAGATGGAGTCCTGCTT+TGG | + | chr5.3:79329426-79329445 | MS.gene38162:CDS | 45.0% | |
| CTAGATAACGCATGGGAAAC+AGG | - | chr5.3:79332899-79332918 | None:intergenic | 45.0% | |
| CTCCTATGCTAGATAACGCA+TGG | - | chr5.3:79332907-79332926 | None:intergenic | 45.0% | |
| CTGAGGACATAATCGAGGTA+AGG | + | chr5.3:79333818-79333837 | MS.gene38162:intron | 45.0% | |
| CTGTATTAGGCGACTCTTGA+TGG | + | chr5.3:79332441-79332460 | MS.gene38162:intron | 45.0% | |
| CTTACCTCGATTATGTCCTC+AGG | - | chr5.3:79333820-79333839 | None:intergenic | 45.0% | |
| CTTTGCTGAATTGAGGCCAA+GGG | - | chr5.3:79329644-79329663 | None:intergenic | 45.0% | |
| GAAGCTACAGGTGATGTTTC+TGG | - | chr5.3:79334138-79334157 | None:intergenic | 45.0% | |
| GACCCTTCAACTATGTCCTT+TGG | - | chr5.3:79331049-79331068 | None:intergenic | 45.0% | |
| GCGAGCCATTAACACAAAAC+GGG | + | chr5.3:79329585-79329604 | MS.gene38162:CDS | 45.0% | |
| GGAGCTTATCAGTTTACCAC+CGG | + | chr5.3:79330198-79330217 | MS.gene38162:CDS | 45.0% | |
| GGGTGCACAGTGGTTAATAT+TGG | + | chr5.3:79329670-79329689 | MS.gene38162:CDS | 45.0% | |
| GGTACACAGGATATGGTTGA+AGG | + | chr5.3:79329691-79329710 | MS.gene38162:CDS | 45.0% | |
| GTCCTCAGGTAACAGGAAAA+TGG | - | chr5.3:79333806-79333825 | None:intergenic | 45.0% | |
| GTTACCTGAGGACATAATCG+AGG | + | chr5.3:79333813-79333832 | MS.gene38162:CDS | 45.0% | |
| TATCAGTTTACCACCGGACA+AGG | + | chr5.3:79330204-79330223 | MS.gene38162:CDS | 45.0% | |
| TCACTTATGGTCAAGGCAGA+TGG | - | chr5.3:79330959-79330978 | None:intergenic | 45.0% | |
| TCCCATGCGTTATCTAGCAT+AGG | + | chr5.3:79332902-79332921 | MS.gene38162:intron | 45.0% | |
| TCTACAGTTCATCGCACTAG+AGG | - | chr5.3:79330579-79330598 | None:intergenic | 45.0% | |
| TGCTTCCAATTGACAGATCC+AGG | - | chr5.3:79331865-79331884 | None:intergenic | 45.0% | |
| TGGATCTGTCAATTGGAAGC+AGG | + | chr5.3:79331864-79331883 | MS.gene38162:CDS | 45.0% | |
| TGTCGGATCACTTATGGTCA+AGG | - | chr5.3:79330966-79330985 | None:intergenic | 45.0% | |
| ! | ATCTTCTGGTTGACCTGTCA+AGG | - | chr5.3:79334051-79334070 | None:intergenic | 45.0% |
| ! | CTGATGATGCACAGACATCT+CGG | + | chr5.3:79331619-79331638 | MS.gene38162:CDS | 45.0% |
| ! | GGGAGAGAAAGGTATAGGAT+AGG | - | chr5.3:79332790-79332809 | None:intergenic | 45.0% |
| ! | TGATGATGCACAGACATCTC+GGG | + | chr5.3:79331620-79331639 | MS.gene38162:CDS | 45.0% |
| ! | TGGTTTTCATTCCTCTCCCA+TGG | - | chr5.3:79329619-79329638 | None:intergenic | 45.0% |
| !! | CAACTATGTCCTTTGGAGTG+AGG | - | chr5.3:79331042-79331061 | None:intergenic | 45.0% |
| !! | CTAGCATAGGAGTGTCTAAC+AGG | + | chr5.3:79332915-79332934 | MS.gene38162:intron | 45.0% |
| !! | GTTTCGAGTTGGTTTCCATG+CGG | - | chr5.3:79332364-79332383 | None:intergenic | 45.0% |
| !!! | AAGGGGTGTGGGTGTTATTT+TGG | + | chr5.3:79328875-79328894 | MS.gene38162:intron | 45.0% |
| AAACTCCAGTTGACCACCCT+TGG | - | chr5.3:79333559-79333578 | None:intergenic | 50.0% | |
| AAAGAGGACGGGGTAGTTGA+TGG | + | chr5.3:79331396-79331415 | MS.gene38162:intron | 50.0% | |
| AAAGGCTATTGGGTGCACAG+TGG | + | chr5.3:79329660-79329679 | MS.gene38162:CDS | 50.0% | |
| AGGGGAGATGCGGATAATTG+AGG | - | chr5.3:79328744-79328763 | None:intergenic | 50.0% | |
| CAAACTCGAGCTGCAGCAAA+AGG | + | chr5.3:79329224-79329243 | MS.gene38162:CDS | 50.0% | |
| CAGAACAACAGGGGCTCATA+AGG | - | chr5.3:79330649-79330668 | None:intergenic | 50.0% | |
| CCTTGGCCTCAATTCAGCAA+AGG | + | chr5.3:79329642-79329661 | MS.gene38162:CDS | 50.0% | |
| CCTTTGCTGAATTGAGGCCA+AGG | - | chr5.3:79329645-79329664 | None:intergenic | 50.0% | |
| GACAAAATGGCAGGATGTGG+AGG | + | chr5.3:79330177-79330196 | MS.gene38162:intron | 50.0% | |
| GAGGACGGATCTATAGCTGA+TGG | + | chr5.3:79331522-79331541 | MS.gene38162:intron | 50.0% | |
| GGGATCTTAATCCATGGGAG+AGG | + | chr5.3:79329605-79329624 | MS.gene38162:CDS | 50.0% | |
| TCACCTGTAGCTTCAGCAGA+TGG | + | chr5.3:79334144-79334163 | MS.gene38162:CDS | 50.0% | |
| ! | CAATCGGGTCGTGTTGTTGT+GGG | + | chr5.3:79328401-79328420 | MS.gene38162:CDS | 50.0% |
| ! | TCAATCGGGTCGTGTTGTTG+TGG | + | chr5.3:79328400-79328419 | MS.gene38162:CDS | 50.0% |
| AACGCATGGGAAACAGGGGA+AGG | - | chr5.3:79332893-79332912 | None:intergenic | 55.0% | |
| ACGCATGGGAAACAGGGGAA+GGG | - | chr5.3:79332892-79332911 | None:intergenic | 55.0% | |
| ACTCGAGCTGCAGCAAAAGG+TGG | + | chr5.3:79329227-79329246 | MS.gene38162:CDS | 55.0% | |
| CCACAGCGCTCAAAAGCTCA+AGG | - | chr5.3:79333534-79333553 | None:intergenic | 55.0% | |
| CCGCACAGGCAAGGTTGTTA+CGG | + | chr5.3:79332845-79332864 | MS.gene38162:intron | 55.0% | |
| CCGTAACAACCTTGCCTGTG+CGG | - | chr5.3:79332848-79332867 | None:intergenic | 55.0% | |
| CGTAACAACCTTGCCTGTGC+GGG | - | chr5.3:79332847-79332866 | None:intergenic | 55.0% | |
| CTGAATTGAGGCCAAGGGTG+TGG | - | chr5.3:79329639-79329658 | None:intergenic | 55.0% | |
| GCTCGCTCATCTATTGTCCC+AGG | - | chr5.3:79329571-79329590 | None:intergenic | 55.0% | |
| GCTCTTGCTCCAGAAACTGC+AGG | + | chr5.3:79330932-79330951 | MS.gene38162:CDS | 55.0% | |
| TCGCCATCTGCTGAAGCTAC+AGG | - | chr5.3:79334150-79334169 | None:intergenic | 55.0% | |
| TGTGAAGCCTTAAGGCAGGG+AGG | - | chr5.3:79332744-79332763 | None:intergenic | 55.0% | |
| TTGGCAACCTCCCTGCCTTA+AGG | + | chr5.3:79332734-79332753 | MS.gene38162:intron | 55.0% | |
| ! | TTTGAGCGCTGTGGAGCCAA+GGG | + | chr5.3:79333540-79333559 | MS.gene38162:CDS | 55.0% |
| !! | CCTTGAGCTTTTGAGCGCTG+TGG | + | chr5.3:79333531-79333550 | MS.gene38162:CDS | 55.0% |
| !! | TTTTGAGCGCTGTGGAGCCA+AGG | + | chr5.3:79333539-79333558 | MS.gene38162:CDS | 55.0% |
| AGGGGAAGGGGGGAAGAAAC+AGG | - | chr5.3:79332879-79332898 | None:intergenic | 60.0% | |
| CAAAGGGGCAGTGTGCACAG+TGG | + | chr5.3:79333417-79333436 | MS.gene38162:intron | 60.0% | |
| CATGGGAAACAGGGGAAGGG+GGG | - | chr5.3:79332889-79332908 | None:intergenic | 60.0% | |
| CGAGCTGCAGCAAAAGGTGG+CGG | + | chr5.3:79329230-79329249 | MS.gene38162:CDS | 60.0% | |
| CGCATGGGAAACAGGGGAAG+GGG | - | chr5.3:79332891-79332910 | None:intergenic | 60.0% | |
| GCAGATGGGCCTGCAGTTTC+TGG | - | chr5.3:79330944-79330963 | None:intergenic | 60.0% | |
| GCATGGGAAACAGGGGAAGG+GGG | - | chr5.3:79332890-79332909 | None:intergenic | 60.0% | |
| TGGAGCCAAGGGTGGTCAAC+TGG | + | chr5.3:79333551-79333570 | MS.gene38162:CDS | 60.0% | |
| CAACCTTGCCTGTGCGGGCA+AGG | - | chr5.3:79332842-79332861 | None:intergenic | 65.0% | |
| CTTGCCTGTGCGGGCAAGGA+GGG | - | chr5.3:79332838-79332857 | None:intergenic | 65.0% | |
| TGCGGGCAAGGAGGGGGAAA+TGG | - | chr5.3:79332830-79332849 | None:intergenic | 65.0% | |
| TTGCCTGTGCGGGCAAGGAG+GGG | - | chr5.3:79332837-79332856 | None:intergenic | 65.0% | |
| CCTCCTTGCCCGCACAGGCA+AGG | + | chr5.3:79332836-79332855 | MS.gene38162:intron | 70.0% | |
| CCTTGCCTGTGCGGGCAAGG+AGG | - | chr5.3:79332839-79332858 | None:intergenic | 70.0% | |
| TGCCTGTGCGGGCAAGGAGG+GGG | - | chr5.3:79332836-79332855 | None:intergenic | 70.0% | |
| TTCCCCCTCCTTGCCCGCAC+AGG | + | chr5.3:79332831-79332850 | MS.gene38162:intron | 70.0% | |
| ! | GAGCGCTGTGGAGCCAAGGG+TGG | + | chr5.3:79333543-79333562 | MS.gene38162:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 79328174 | 79334248 | 79328174 | ID=MS.gene38162 |
| chr5.3 | mRNA | 79328174 | 79334248 | 79328174 | ID=MS.gene38162.t1;Parent=MS.gene38162 |
| chr5.3 | exon | 79328174 | 79328260 | 79328174 | ID=MS.gene38162.t1.exon1;Parent=MS.gene38162.t1 |
| chr5.3 | CDS | 79328174 | 79328260 | 79328174 | ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1 |
| chr5.3 | exon | 79328383 | 79328553 | 79328383 | ID=MS.gene38162.t1.exon2;Parent=MS.gene38162.t1 |
| chr5.3 | CDS | 79328383 | 79328553 | 79328383 | ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1 |
| chr5.3 | exon | 79329209 | 79329447 | 79329209 | ID=MS.gene38162.t1.exon3;Parent=MS.gene38162.t1 |
| chr5.3 | CDS | 79329209 | 79329447 | 79329209 | ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1 |
| chr5.3 | exon | 79329546 | 79329717 | 79329546 | ID=MS.gene38162.t1.exon4;Parent=MS.gene38162.t1 |
| chr5.3 | CDS | 79329546 | 79329717 | 79329546 | ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1 |
| chr5.3 | exon | 79329814 | 79329852 | 79329814 | ID=MS.gene38162.t1.exon5;Parent=MS.gene38162.t1 |
| chr5.3 | CDS | 79329814 | 79329852 | 79329814 | ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1 |
| chr5.3 | exon | 79329999 | 79330067 | 79329999 | ID=MS.gene38162.t1.exon6;Parent=MS.gene38162.t1 |
| chr5.3 | CDS | 79329999 | 79330067 | 79329999 | ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1 |
| chr5.3 | exon | 79330190 | 79330306 | 79330190 | ID=MS.gene38162.t1.exon7;Parent=MS.gene38162.t1 |
| chr5.3 | CDS | 79330190 | 79330306 | 79330190 | ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1 |
| chr5.3 | exon | 79330902 | 79331113 | 79330902 | ID=MS.gene38162.t1.exon8;Parent=MS.gene38162.t1 |
| chr5.3 | CDS | 79330902 | 79331113 | 79330902 | ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1 |
| chr5.3 | exon | 79331569 | 79331724 | 79331569 | ID=MS.gene38162.t1.exon9;Parent=MS.gene38162.t1 |
| chr5.3 | CDS | 79331569 | 79331724 | 79331569 | ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1 |
| chr5.3 | exon | 79331828 | 79332027 | 79331828 | ID=MS.gene38162.t1.exon10;Parent=MS.gene38162.t1 |
| chr5.3 | CDS | 79331828 | 79332027 | 79331828 | ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1 |
| chr5.3 | exon | 79332964 | 79333121 | 79332964 | ID=MS.gene38162.t1.exon11;Parent=MS.gene38162.t1 |
| chr5.3 | CDS | 79332964 | 79333121 | 79332964 | ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1 |
| chr5.3 | exon | 79333502 | 79333598 | 79333502 | ID=MS.gene38162.t1.exon12;Parent=MS.gene38162.t1 |
| chr5.3 | CDS | 79333502 | 79333598 | 79333502 | ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1 |
| chr5.3 | exon | 79333743 | 79333834 | 79333743 | ID=MS.gene38162.t1.exon13;Parent=MS.gene38162.t1 |
| chr5.3 | CDS | 79333743 | 79333834 | 79333743 | ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1 |
| chr5.3 | exon | 79334057 | 79334248 | 79334057 | ID=MS.gene38162.t1.exon14;Parent=MS.gene38162.t1 |
| chr5.3 | CDS | 79334057 | 79334248 | 79334057 | ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1 |
| Gene Sequence |
| Protein sequence |
