AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene38162


Find 128 sgRNAs with CRISPR-Local

Find 387 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE



Chromosome Type Strat End Strand Name
chr5.3 gene 79328174 79334248 79328174 ID=MS.gene38162
chr5.3 mRNA 79328174 79334248 79328174 ID=MS.gene38162.t1;Parent=MS.gene38162
chr5.3 exon 79328174 79328260 79328174 ID=MS.gene38162.t1.exon1;Parent=MS.gene38162.t1
chr5.3 CDS 79328174 79328260 79328174 ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1
chr5.3 exon 79328383 79328553 79328383 ID=MS.gene38162.t1.exon2;Parent=MS.gene38162.t1
chr5.3 CDS 79328383 79328553 79328383 ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1
chr5.3 exon 79329209 79329447 79329209 ID=MS.gene38162.t1.exon3;Parent=MS.gene38162.t1
chr5.3 CDS 79329209 79329447 79329209 ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1
chr5.3 exon 79329546 79329717 79329546 ID=MS.gene38162.t1.exon4;Parent=MS.gene38162.t1
chr5.3 CDS 79329546 79329717 79329546 ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1
chr5.3 exon 79329814 79329852 79329814 ID=MS.gene38162.t1.exon5;Parent=MS.gene38162.t1
chr5.3 CDS 79329814 79329852 79329814 ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1
chr5.3 exon 79329999 79330067 79329999 ID=MS.gene38162.t1.exon6;Parent=MS.gene38162.t1
chr5.3 CDS 79329999 79330067 79329999 ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1
chr5.3 exon 79330190 79330306 79330190 ID=MS.gene38162.t1.exon7;Parent=MS.gene38162.t1
chr5.3 CDS 79330190 79330306 79330190 ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1
chr5.3 exon 79330902 79331113 79330902 ID=MS.gene38162.t1.exon8;Parent=MS.gene38162.t1
chr5.3 CDS 79330902 79331113 79330902 ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1
chr5.3 exon 79331569 79331724 79331569 ID=MS.gene38162.t1.exon9;Parent=MS.gene38162.t1
chr5.3 CDS 79331569 79331724 79331569 ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1
chr5.3 exon 79331828 79332027 79331828 ID=MS.gene38162.t1.exon10;Parent=MS.gene38162.t1
chr5.3 CDS 79331828 79332027 79331828 ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1
chr5.3 exon 79332964 79333121 79332964 ID=MS.gene38162.t1.exon11;Parent=MS.gene38162.t1
chr5.3 CDS 79332964 79333121 79332964 ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1
chr5.3 exon 79333502 79333598 79333502 ID=MS.gene38162.t1.exon12;Parent=MS.gene38162.t1
chr5.3 CDS 79333502 79333598 79333502 ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1
chr5.3 exon 79333743 79333834 79333743 ID=MS.gene38162.t1.exon13;Parent=MS.gene38162.t1
chr5.3 CDS 79333743 79333834 79333743 ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1
chr5.3 exon 79334057 79334248 79334057 ID=MS.gene38162.t1.exon14;Parent=MS.gene38162.t1
chr5.3 CDS 79334057 79334248 79334057 ID=cds.MS.gene38162.t1;Parent=MS.gene38162.t1
Gene Sequence

>MS.gene38162

ATGTCTAGTTTTGTGGGTGTTCTTGTTTCTGATCAATGGCTTCAGAGCCAGTTCACTCAAGTCGAATTAAGAACTCTCAAATCAAAAGTAAGTTTTTTTATTTTATTTTGTGATTTTAATTTCAATTTGACCATTTTGATTTCTTGATCATTGATGAGGATTTCAATGAATTTGAATGATGTAATGTGTTTCTTTTGTGATGTTTGTAGTATGTATCTGAAAGAACTCAATCGGGTCGTGTTGTTGTGGGAAATTTACCTCCCATTTTCAAGAAATTGAAGGCTTTTGCGGAGTTTTTTACTGAGGATGAGATTAAGGCTGTATTGGAAGAGTCGTATCAGAATATGGATGATGAAATTGATTTTGAGTCCTTCCTTAGGGTGAGCTCTTTTTTCGTTCTTTGTTGCCCTTTTTCGTTTACGCGCTTTTTATATAATGTTTCTTGATTTCATAGAAGAAATAGTACGTAATGGAGAAAATGCACTCATCTCCCTGATGTATGCTTAGATGACACATATAGTCATATGCTATTTTGATTTAGGAAAAGACATTGATCATATGATATGTCCTCAATTATCCGCATCTCCCCTCTATTATATAGAAACAGAGGGTGTGTATGTGTTTCATTTAAGCAAAACTAAGGTGAGGGGTGTGCAATTTTTCCAACAAATAAGAGTGGTTAGTGTTCATTTGAAAAATAGAAGGGGTGTGGGTGTTATTTTGGCATTCCTCGTAGTAGATAAGTGCAAATTCCACGAGAACATACAAGAATGTCATTGATGTTCAATTTACTTCTAGAGTCTTGCTTGATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGCACCTAATTTGAAAGTATACTTTTGTGTTTTGATTCAAATGTCTGTGTGGGAATGTGTATTCAGTTTATTTGTAAGTAACTTTATAGGTATTATCTATACTGAACCTGGTAGCTTATTTATTGACATTGAGTGGTAGGCACATTTAAACTTGCAAACTCGAGCTGCAGCAAAAGGTGGCGGTTCAAAAAGTTCTTCTTCATTTTTGAAGGCAGCTACGACTACTGTTCATCATGCAATTAATGAATCTGAGAAGGCTTCTTATGTCGCACACATTAACAGTTACTTGGCTGAAGATAAATTCATGAAGCAGTTTCTTCCAATTGATCCGTCTACAAATGCATTGTTTGATCTTGCTAAAGATGGAGTCCTGCTTTGGTAAATGATCAGCGCCAAACATAAGATCAATTCTATTTTTTATAAAAAAAGACTAAATTTTTATCTGTCTAATTTTATTGTTTATTTAACTGCTGCAGCAAGCTTATTAATGTTGCTGTTCCTGGGACAATAGATGAGCGAGCCATTAACACAAAACGGGATCTTAATCCATGGGAGAGGAATGAAAACCACACCCTTGGCCTCAATTCAGCAAAGGCTATTGGGTGCACAGTGGTTAATATTGGTACACAGGATATGGTTGAAGGAAGAGTATGTTCAATCTTCTTTTTTGCGATTTTGATCCCCTGAATTTTGACAGACTTAAACTCTTTAGTTTTGACAAGTTTCTTGTTTGTTTATTTGTAGCCTTATTTGGTACTTGGTCTGATTTCACAAATAATCAAGGTACAACTGAAACCTACTCCATTTTCACTTGCATAAGATGAGGGATTGACAGTTAATACCATTCTGATTTCTATTATTCATTGGAAAGACTTCTTAACTTATGGTTTCTTGTGTTTGTCTGTCTTTTCATTCTTTGGCAACATTAGATTCAATTGTTAGCTGATCTCAATCTGAAGAAAACTCCTCAACTTTTGGAATTAGTGGAAGATGATAAGGTGATATTGGATAATATTGTTCTTTTTATATGTAATTTACAAGTTCCGTGATATTCTTTCCTTTTCATTTGTCAGAACTGCGATTAAATTAAACCTCTTCATATGTTATGACAAAATGGCAGGATGTGGAGGAGCTTATCAGTTTACCACCGGACAAGGTTTTATTGAAATGGATGAATTTCCACTTGAAGAAAGCTGGTTATGAGAAACAAGTTACAAATTTCTCATCTGATGTAAAGGTGAGGGAAATGCTATTTCTTATTGTATGTTTACTTACTCTAATTAAAGTTGTTAGAAATGATAAAAATAAGTAGTTACAGTATCATGTAAATATATAATGCTGGGTAGCGTTAAATACTTCGTATTATCATGATGTGTGTGCATATATAATATAACATAGCTCCGGTGTGTGTAGAATACACAAATTCCATCACTTGCTTTCTTAACATGGTGTCAGAGCAACTTATTTTCATCATTTCTAAGACTCATAGTACTTCAGGATTTGGCTCCTCTAGTGCGATGAACTGTAGAATGAAATTGAGGAGGTATAACAATTAATGAACTAGTATCATAGTACTCCTTATGAGCCCCTGTTGTTCTGATTTACTAAATCAGTGAAGAAACTGTGGCCCTTTTTATCTTCTGCTGTCCTTGACAGTGTTCAGTAGTTTTCTATGAAAAATTCACTGTATTGTTGTCCTGTAACATGCTGATTACTGAATCATTGTGTGGCACATTTTCCTCACATAGCATACGTTCGATAGATGTAAACAGATACAACATGGTTCTAAATTGCGCGGGTCTATTTTATCATTGAATACTTTCTTTTTGCAGGATGGAGAGGCTTATGCGTACTTGCTTAATGCTCTTGCTCCAGAAACTGCAGGCCCATCTGCCTTGACCATAAGTGATCCGACAGAAAGAGCAAATATGGTTCTTGAGCAGGCAGAGAGATTAGATTGCAAGAGATACCTCACTCCAAAGGACATAGTTGAAGGGTCACCTAACCTTAATCTTGCATTTGTTGCACAAATTTTCCAGCATAGGTATGGTTACTTTTAGGAGGTTGCAATTGTGCTAATCACTTCGTTGCAAATTTATACATTAAGAATATTTTGGGGCATGTTTCCAAGAACCTGCTACTTTTCCTTTGCCTTTTTTTTATTGGGAAAAGGTTAGCTCCTCTAATTTTTTTTATTGGCCTTTTGAGTATCTTTTTTTGGATGAAGGGCTTCTTAGTATCCGGTTCATTATATCTTAGTATAGAACAGTTCAGATTTCTTTCTTTTGATTGTTTCCACTAGACTAGAACTTTCTCTTTAGGAAAAAAAGAGGACGGGGTAGTTGATGGCATACATATCACATAATGGGTCACCCTTATTGGTTCATTTTATTTACATTTACTGGGAACAAGTATCTAGGAGTAGTGCAGTTATAGAGTTAGGAAATGTATAGAGGACGGATCTATAGCTGATGGAGATTGTGGCTTTCATTTCTGTAGGAATGGGCTTACAGTTGACACGAATAAAATGTCCTTCGCTGAGATGATGACTGATGATGCACAGACATCTCGGGAAGAAAGATGCTTCAGACTCTGGATCAACAGTCTTGGAATTGCTACTTATGTCAATAATGTTTTCGAGGATGTCAGAAATGGGTAGCTTTTCCTTTCCTGTTCACATTTGTCCTGTACTTCTGCCTTTTAATTTTTTCATTGAACCAACTACTGGTTATGGATTTCCTTATTTCTTTTTTCACAGATGGGTTCTATTAGAAGTTCTTGATAAGGTTTCTCCTGGATCTGTCAATTGGAAGCAGGCGACAAAGCCTCCTATAAAGATGCCATTTCGGAAAGTGGAGAACTGCAACCAAGTTATAAAAATTGGGAAGGACCTAAACTTTTCCTTAGTAAATGTTGCTGGTAACGATATTGTTCAAGGGAATAAGAAGCTCTTACTAGGTTAGTTTCTATGATTTTCAGATTTATGATAAATCGGTATTGTTGGTGAAGCCGATATGTTTGCGTGTGCTTTGTTTTATACTGCTACTATTTCTTTCTAAATCAATATTATAACTGAAGATAACCAATAGGCCCGATATGTTCTTGTTATTTCATACAAGGAACATTAATAATTGTTCTCAAACTATTGCAGAACTATATATTAGACCTTATTTCCATGGTGAGTGTAGATGTAGAAAATCTGATTTTCTGCTAAAAAGAATATCGTAAACTCTAATTTCATTTATCTAGATGATATATTGACAATTCAATATTATATTTCAAATCGAAACACCGCATGGAAACCAACTCGAAACTGCAATTTTATTAAGACAGTTTAAATGAGAAGTTACTGAAAAGTAGGAACTGTGTGTCTGTATTAGGCGACTCTTGATGGATTTGAGATGACAATTTCCTTTCCTCTTTTTGTTCTTAGTTATAGTGAAAGTTAAAAAAACTGTCTTTCTAGGAAATGTTAAAATGAGAGATCCTTCTTCTGTAACATTATAGATGGGATGTTGTGACGAAGTTCTGTTGATTGGTCATTATCTTGTTCAGAACTGTCGCATTAAATTTTGAAACTGATGGGAACTAGAAATATTATAACCGAAGAATGGATTAAGAGCCTATTTGAGAGGTAAGATCTGATTTACTCACAGACTAGGTTTTGGCAACCTCCCTGCCTTAAGGCTTCACAAAAACTCACTAATGACTAGCTACCCTATCCTATACCTTTCTCTCCCTTTATCATCGTTTTTAACCATTTCCCCCTCCTTGCCCGCACAGGCAAGGTTGTTACGGACACAACTCCTGTTTCTTCCCCCCTTCCCCTGTTTCCCATGCGTTATCTAGCATAGGAGTGTCTAACAGGAACATTTATCTCTATTTGTCCAACAGCTTTTTTGTGGCAGCTTATGAGATTTACCATGCTTCAACTTCTGAAAAACTTGAGATCACACTCCCAAGGTAAAGAGATTACTGATGCTGATATACTAAACTGGGCGAATAACAAAGTGAAGAAAGCCGGAAGAACATCTGAAATGGAGAGTTTCAAGGTAATAAAGCAGAAAATAGCCAGTTCTGAGTATACTGATATTGACATGTATGCATATTATCTTAAGGCGGCTCCAAAACAGTTTATATTATGAATTCACTGTTGAGAATAATATGTATATGTATTTGCATTTGCATATATCATATTTGGTACTCTTAATTTTACATTTATACAAAACAATTATCAGTCTTAGATATTTGCTCTCATATTAAATGACAAGCATTTGATATCTGCTGATAGTAAAAACTAATTTTGTTAAAGCTTTAGAATAAAGAAAAGGACTGTTCAATGTTTAACAAAGGGGCAGTGTGCACAGTGGTTGCTTTGATGTTTAGACTCCAACACATTTTTTAGATTTATTAATTTATTTTCTTTTTTCAGGATAAGAATCTTTCCAACGGAATTTTCTTCCTTGAGCTTTTGAGCGCTGTGGAGCCAAGGGTGGTCAACTGGAGTTTAGTTACTAAAGGGGAGACTGGTATGTCAACTTTGCCACACCTTCAAGAAATTGAAGCTAACTTGATCAAGCATTTAATTTAACATTGATGTGATGCGATAGTGAATATGTTATCTTACTAACAATAATTGAAATGTTAAATGTAATCTGTTGTACAAATTACAGATGATGACAAGAAGTTGAATTCAACATATATAATCAGTGTTGCCAGAAAACTTGGATGTTCCATTTTCCTGTTACCTGAGGACATAATCGAGGTAAGGCTGTCAATATTAAATTTAATTTTAACAGTAATTTTGCTAGTGCTCCATGAAAAATCAACTTCATGGTTTTGTTAAGTTTGGTGAATGTTATAAAATCAACTTCAATGGTTTGTTCAGATAGAATGTATTAAGTCTTACCTAGATTATACCATACTTTATTGCGCTGAGAAATTTTATTTTTGTGGCTCAAGCTTATTTTGCATTTAACCTTGACAGGTCAACCAGAAGATGATACTCACTTTATCTGCTAGCATCATGTACTGGAGCCTGCTGAATTCTGAAGAAAACAGCACACCAGAAACATCACCTGTAGCTTCAGCAGATGGCGAACATGAAACAGATTTAGTCAATGAGGTATCCGATTTAGCTATTGATGATAATGCTGCAGAGAATGCCAACTCTCCTTAA

Protein sequence

>MS.gene38162.t1

MSSFVGVLVSDQWLQSQFTQVELRTLKSKYVSERTQSGRVVVGNLPPIFKKLKAFAEFFTEDEIKAVLEESYQNMDDEIDFESFLRAHLNLQTRAAAKGGGSKSSSSFLKAATTTVHHAINESEKASYVAHINSYLAEDKFMKQFLPIDPSTNALFDLAKDGVLLCKLINVAVPGTIDERAINTKRDLNPWERNENHTLGLNSAKAIGCTVVNIGTQDMVEGRPYLVLGLISQIIKIQLLADLNLKKTPQLLELVEDDKDVEELISLPPDKVLLKWMNFHLKKAGYEKQVTNFSSDVKDGEAYAYLLNALAPETAGPSALTISDPTERANMVLEQAERLDCKRYLTPKDIVEGSPNLNLAFVAQIFQHRNGLTVDTNKMSFAEMMTDDAQTSREERCFRLWINSLGIATYVNNVFEDVRNGWVLLEVLDKVSPGSVNWKQATKPPIKMPFRKVENCNQVIKIGKDLNFSLVNVAGNDIVQGNKKLLLAFLWQLMRFTMLQLLKNLRSHSQGKEITDADILNWANNKVKKAGRTSEMESFKDKNLSNGIFFLELLSAVEPRVVNWSLVTKGETDDDKKLNSTYIISVARKLGCSIFLLPEDIIEVNQKMILTLSASIMYWSLLNSEENSTPETSPVASADGEHETDLVNEVSDLAIDDNAAENANSP