Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38106.t1 | XP_003618022.1 | 99.5 | 666 | 3 | 0 | 1 | 666 | 1 | 666 | 0.00E+00 | 1247.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38106.t1 | Q9FKI0 | 76.4 | 656 | 153 | 1 | 1 | 656 | 1 | 654 | 7.0e-289 | 994.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38106.t1 | G7K508 | 99.5 | 666 | 3 | 0 | 1 | 666 | 1 | 666 | 0.0e+00 | 1247.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene38106 | 0.84148 | 4.63E-58 | -1.69E-46 |
| MS.gene049435 | MS.gene38106 | 0.811961 | 5.39E-51 | -1.69E-46 |
| MS.gene049501 | MS.gene38106 | 0.803537 | 3.33E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene38106 | 0.847767 | 9.39E-60 | -1.69E-46 |
| MS.gene050227 | MS.gene38106 | 0.848887 | 4.60E-60 | -1.69E-46 |
| MS.gene050228 | MS.gene38106 | 0.853586 | 2.17E-61 | -1.69E-46 |
| MS.gene050442 | MS.gene38106 | 0.836578 | 8.62E-57 | -1.69E-46 |
| MS.gene050605 | MS.gene38106 | 0.805302 | 1.43E-49 | -1.69E-46 |
| MS.gene050623 | MS.gene38106 | -0.829297 | 5.57E-55 | -1.69E-46 |
| MS.gene050719 | MS.gene38106 | 0.852288 | 5.09E-61 | -1.69E-46 |
| MS.gene050721 | MS.gene38106 | 0.849636 | 2.85E-60 | -1.69E-46 |
| MS.gene050724 | MS.gene38106 | 0.840471 | 8.52E-58 | -1.69E-46 |
| MS.gene050780 | MS.gene38106 | 0.826143 | 3.19E-54 | -1.69E-46 |
| MS.gene051198 | MS.gene38106 | 0.823656 | 1.23E-53 | -1.69E-46 |
| MS.gene051210 | MS.gene38106 | 0.808584 | 2.88E-50 | -1.69E-46 |
| MS.gene051452 | MS.gene38106 | 0.802347 | 5.86E-49 | -1.69E-46 |
| MS.gene051744 | MS.gene38106 | 0.803712 | 3.06E-49 | -1.69E-46 |
| MS.gene051757 | MS.gene38106 | 0.801474 | 8.85E-49 | -1.69E-46 |
| MS.gene052012 | MS.gene38106 | 0.810807 | 9.59E-51 | -1.69E-46 |
| MS.gene052020 | MS.gene38106 | 0.819852 | 9.34E-53 | -1.69E-46 |
| MS.gene052176 | MS.gene38106 | 0.82327 | 1.52E-53 | -1.69E-46 |
| MS.gene052323 | MS.gene38106 | 0.817456 | 3.27E-52 | -1.69E-46 |
| MS.gene052376 | MS.gene38106 | 0.800843 | 1.19E-48 | -1.69E-46 |
| MS.gene052856 | MS.gene38106 | 0.829263 | 5.68E-55 | -1.69E-46 |
| MS.gene052858 | MS.gene38106 | 0.821514 | 3.88E-53 | -1.69E-46 |
| MS.gene052860 | MS.gene38106 | 0.82257 | 2.21E-53 | -1.69E-46 |
| MS.gene052896 | MS.gene38106 | 0.806673 | 7.34E-50 | -1.69E-46 |
| MS.gene053079 | MS.gene38106 | 0.826015 | 3.42E-54 | -1.69E-46 |
| MS.gene053216 | MS.gene38106 | 0.803085 | 4.12E-49 | -1.69E-46 |
| MS.gene05510 | MS.gene38106 | 0.832028 | 1.19E-55 | -1.69E-46 |
| MS.gene055222 | MS.gene38106 | 0.821157 | 4.69E-53 | -1.69E-46 |
| MS.gene055623 | MS.gene38106 | 0.814483 | 1.51E-51 | -1.69E-46 |
| MS.gene055701 | MS.gene38106 | 0.803681 | 3.10E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene38106 | 0.802452 | 5.57E-49 | -1.69E-46 |
| MS.gene056506 | MS.gene38106 | 0.854827 | 9.49E-62 | -1.69E-46 |
| MS.gene056552 | MS.gene38106 | 0.818219 | 2.20E-52 | -1.69E-46 |
| MS.gene057026 | MS.gene38106 | 0.800264 | 1.56E-48 | -1.69E-46 |
| MS.gene057140 | MS.gene38106 | 0.815123 | 1.09E-51 | -1.69E-46 |
| MS.gene057314 | MS.gene38106 | 0.80403 | 2.63E-49 | -1.69E-46 |
| MS.gene057360 | MS.gene38106 | 0.808691 | 2.73E-50 | -1.69E-46 |
| MS.gene05761 | MS.gene38106 | 0.81948 | 1.14E-52 | -1.69E-46 |
| MS.gene057869 | MS.gene38106 | 0.837125 | 6.25E-57 | -1.69E-46 |
| MS.gene057915 | MS.gene38106 | 0.803294 | 3.73E-49 | -1.69E-46 |
| MS.gene057980 | MS.gene38106 | 0.801148 | 1.03E-48 | -1.69E-46 |
| MS.gene058084 | MS.gene38106 | 0.808575 | 2.90E-50 | -1.69E-46 |
| MS.gene058146 | MS.gene38106 | 0.803496 | 3.39E-49 | -1.69E-46 |
| MS.gene058399 | MS.gene38106 | 0.803252 | 3.81E-49 | -1.69E-46 |
| MS.gene058636 | MS.gene38106 | 0.800583 | 1.35E-48 | -1.69E-46 |
| MS.gene058906 | MS.gene38106 | 0.808149 | 3.57E-50 | -1.69E-46 |
| MS.gene058979 | MS.gene38106 | 0.800789 | 1.22E-48 | -1.69E-46 |
| MS.gene059128 | MS.gene38106 | 0.806235 | 9.08E-50 | -1.69E-46 |
| MS.gene059249 | MS.gene38106 | 0.819792 | 9.64E-53 | -1.69E-46 |
| MS.gene059317 | MS.gene38106 | 0.812008 | 5.26E-51 | -1.69E-46 |
| MS.gene059331 | MS.gene38106 | 0.803334 | 3.66E-49 | -1.69E-46 |
| MS.gene059335 | MS.gene38106 | 0.801299 | 9.61E-49 | -1.69E-46 |
| MS.gene059725 | MS.gene38106 | 0.829006 | 6.55E-55 | -1.69E-46 |
| MS.gene059830 | MS.gene38106 | 0.816074 | 6.67E-52 | -1.69E-46 |
| MS.gene060011 | MS.gene38106 | 0.812657 | 3.80E-51 | -1.69E-46 |
| MS.gene060084 | MS.gene38106 | 0.806394 | 8.40E-50 | -1.69E-46 |
| MS.gene060165 | MS.gene38106 | 0.807826 | 4.18E-50 | -1.69E-46 |
| MS.gene060297 | MS.gene38106 | 0.827597 | 1.43E-54 | -1.69E-46 |
| MS.gene060310 | MS.gene38106 | 0.824369 | 8.38E-54 | -1.69E-46 |
| MS.gene060619 | MS.gene38106 | 0.843138 | 1.68E-58 | -1.69E-46 |
| MS.gene060637 | MS.gene38106 | 0.853757 | 1.93E-61 | -1.69E-46 |
| MS.gene060683 | MS.gene38106 | 0.834206 | 3.43E-56 | -1.69E-46 |
| MS.gene060685 | MS.gene38106 | 0.831719 | 1.42E-55 | -1.69E-46 |
| MS.gene060802 | MS.gene38106 | 0.803748 | 3.01E-49 | -1.69E-46 |
| MS.gene060803 | MS.gene38106 | 0.816201 | 6.25E-52 | -1.69E-46 |
| MS.gene060998 | MS.gene38106 | 0.822241 | 2.63E-53 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38106.t1 | MTR_5g098130 | 99.550 | 666 | 3 | 0 | 1 | 666 | 1 | 666 | 0.0 | 1367 |
| MS.gene38106.t1 | MTR_5g098130 | 99.590 | 488 | 2 | 0 | 1 | 488 | 1 | 488 | 0.0 | 1006 |
| MS.gene38106.t1 | MTR_5g098130 | 23.789 | 227 | 153 | 4 | 405 | 617 | 146 | 366 | 1.22e-11 | 67.8 |
| MS.gene38106.t1 | MTR_5g094160 | 69.412 | 680 | 193 | 2 | 1 | 665 | 1 | 680 | 0.0 | 996 |
| MS.gene38106.t1 | MTR_8g011460 | 68.837 | 645 | 200 | 1 | 1 | 644 | 1 | 645 | 0.0 | 925 |
| MS.gene38106.t1 | MTR_7g052820 | 67.470 | 664 | 205 | 4 | 1 | 661 | 1 | 656 | 0.0 | 910 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38106.t1 | AT5G35700 | 79.116 | 656 | 135 | 2 | 1 | 656 | 1 | 654 | 0.0 | 1082 |
| MS.gene38106.t1 | AT2G04750 | 73.605 | 663 | 161 | 4 | 1 | 661 | 1 | 651 | 0.0 | 1003 |
| MS.gene38106.t1 | AT4G26700 | 68.833 | 677 | 194 | 4 | 1 | 661 | 1 | 676 | 0.0 | 956 |
| MS.gene38106.t1 | AT4G26700 | 68.833 | 677 | 194 | 4 | 1 | 661 | 1 | 676 | 0.0 | 956 |
| MS.gene38106.t1 | AT4G26700 | 68.833 | 677 | 194 | 4 | 1 | 661 | 1 | 676 | 0.0 | 956 |
| MS.gene38106.t1 | AT5G55400 | 67.249 | 687 | 193 | 7 | 1 | 658 | 1 | 684 | 0.0 | 947 |
| MS.gene38106.t1 | AT5G55400 | 67.249 | 687 | 193 | 7 | 1 | 658 | 1 | 684 | 0.0 | 947 |
| MS.gene38106.t1 | AT5G55400 | 67.249 | 687 | 193 | 7 | 1 | 658 | 1 | 684 | 0.0 | 947 |
| MS.gene38106.t1 | AT5G48460 | 66.261 | 658 | 216 | 3 | 1 | 656 | 1 | 654 | 0.0 | 903 |
| MS.gene38106.t1 | AT4G26700 | 72.077 | 573 | 158 | 2 | 1 | 572 | 1 | 572 | 0.0 | 864 |
| MS.gene38106.t1 | AT4G26700 | 72.077 | 573 | 158 | 2 | 1 | 572 | 1 | 572 | 0.0 | 864 |
| MS.gene38106.t1 | AT4G26700 | 72.077 | 573 | 158 | 2 | 1 | 572 | 1 | 572 | 0.0 | 864 |
| MS.gene38106.t1 | AT4G26700 | 71.961 | 510 | 127 | 3 | 167 | 661 | 19 | 527 | 0.0 | 755 |
| MS.gene38106.t1 | AT4G26700 | 24.336 | 226 | 153 | 5 | 146 | 366 | 256 | 468 | 2.28e-11 | 67.4 |
Find 128 sgRNAs with CRISPR-Local
Find 389 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCCTTCAATTTCTTGAAAA+TGG | 0.097004 | 5.1:-78450034 | None:intergenic |
| GCAGATGGGCCTGCAGTTTC+TGG | 0.145741 | 5.1:-78452475 | None:intergenic |
| TGTTTATTTGTAGCCTTATT+TGG | 0.199374 | 5.1:+78451335 | MS.gene38106:intron |
| CTTATTAATGTTGCTGTTCC+TGG | 0.208314 | 5.1:+78451084 | MS.gene38106:CDS |
| GAAGAAAACTCCTCAACTTT+TGG | 0.232213 | 5.1:+78451559 | MS.gene38106:CDS |
| GTGCAACAAATGCAAGATTA+AGG | 0.241539 | 5.1:-78452609 | None:intergenic |
| TCTTTCTGTCGGATCACTTA+TGG | 0.263323 | 5.1:-78452503 | None:intergenic |
| TTCCGAAATGGCATCTTTAT+AGG | 0.267092 | 5.1:-78453432 | None:intergenic |
| GAAGCTACAGGTGATGTTTC+TGG | 0.283137 | 5.1:-78455669 | None:intergenic |
| CTGATGCTGATATACTAAAC+TGG | 0.292071 | 5.1:+78454579 | MS.gene38106:CDS |
| TAATATTGGTACACAGGATA+TGG | 0.301639 | 5.1:+78451218 | MS.gene38106:CDS |
| CTCCATTTCAGATGTTCTTC+CGG | 0.303748 | 5.1:-78454624 | None:intergenic |
| CTCAATTCAGCAAAGGCTAT+TGG | 0.304700 | 5.1:+78451183 | MS.gene38106:CDS |
| GTGTTCTTGTTTCTGATCAA+TGG | 0.308745 | 5.1:+78449789 | MS.gene38106:CDS |
| GTCCTCAGGTAACAGGAAAA+TGG | 0.310800 | 5.1:-78455337 | None:intergenic |
| ATCAGACCAAGTACCAAATA+AGG | 0.331284 | 5.1:-78451348 | None:intergenic |
| CAGTTCTCCACTTTCCGAAA+TGG | 0.351333 | 5.1:-78453444 | None:intergenic |
| CTCCTATAAAGATGCCATTT+CGG | 0.357411 | 5.1:+78453430 | MS.gene38106:CDS |
| TTGTAGCCTTATTTGGTACT+TGG | 0.358094 | 5.1:+78451342 | MS.gene38106:intron |
| CGATTATGTCCTCAGGTAAC+AGG | 0.359547 | 5.1:-78455344 | None:intergenic |
| TCAATTCAGCAAAGGCTATT+GGG | 0.370233 | 5.1:+78451184 | MS.gene38106:CDS |
| GGAATTAGTGGAAGATGATA+AGG | 0.375109 | 5.1:+78451580 | MS.gene38106:CDS |
| ATAAAGTGAGTATCATCTTC+TGG | 0.378823 | 5.1:-78455596 | None:intergenic |
| ATTATCATCAATAGCTAAAT+CGG | 0.379443 | 5.1:-78455733 | None:intergenic |
| CGCACACATTAACAGTTACT+TGG | 0.389361 | 5.1:+78450871 | MS.gene38106:CDS |
| GGAAGAGTCGTATCAGAATA+TGG | 0.390337 | 5.1:+78450098 | MS.gene38106:CDS |
| ATCAGTGTTGCCAGAAAACT+TGG | 0.390508 | 5.1:+78455309 | MS.gene38106:CDS |
| GCCTTCAATTTCTTGAAAAT+GGG | 0.394045 | 5.1:-78450033 | None:intergenic |
| GACCCTTCAACTATGTCCTT+TGG | 0.396033 | 5.1:-78452580 | None:intergenic |
| GGGTGCACAGTGGTTAATAT+TGG | 0.401432 | 5.1:+78451204 | MS.gene38106:CDS |
| CTAAAGATGGAGTCCTGCTT+TGG | 0.403603 | 5.1:+78450960 | MS.gene38106:CDS |
| TGGAGCCAAGGGTGGTCAAC+TGG | 0.404329 | 5.1:+78455085 | MS.gene38106:CDS |
| GCATTTGTAGACGGATCAAT+TGG | 0.408423 | 5.1:-78450923 | None:intergenic |
| CGCTGATCATTTACCAAAGC+AGG | 0.410747 | 5.1:-78450973 | None:intergenic |
| TCCGACAGAAAGAGCAAATA+TGG | 0.413008 | 5.1:+78452513 | MS.gene38106:CDS |
| TTTCACCTGGATCTGTCAAT+TGG | 0.414508 | 5.1:+78453391 | MS.gene38106:CDS |
| ACTGGAGTTTAGTTACTAAA+GGG | 0.417956 | 5.1:+78455103 | MS.gene38106:CDS |
| ATCAGTAATCTCTTTACCTT+GGG | 0.422621 | 5.1:-78454561 | None:intergenic |
| AAGAAAGATGCTTCAGACTC+TGG | 0.423959 | 5.1:+78453177 | MS.gene38106:CDS |
| GGGAATAAGAAGCTCTTACT+AGG | 0.424845 | 5.1:+78453540 | MS.gene38106:CDS |
| CATTTCAATAAAACCTTGTC+CGG | 0.427856 | 5.1:-78451751 | None:intergenic |
| TCTATTAGAAGTTCTTGATA+AGG | 0.431418 | 5.1:+78453368 | MS.gene38106:CDS |
| TGTATCTGAAAGAACTCAAT+CGG | 0.434854 | 5.1:+78449984 | MS.gene38106:CDS |
| TTAATTCGACTTGAGTGAAC+TGG | 0.435059 | 5.1:-78449820 | None:intergenic |
| GGATGAGATTAAGGCTGTAT+TGG | 0.438071 | 5.1:+78450077 | MS.gene38106:CDS |
| AGCCGGAAGAACATCTGAAA+TGG | 0.438304 | 5.1:+78454622 | MS.gene38106:CDS |
| AACTGGAGTTTAGTTACTAA+AGG | 0.442884 | 5.1:+78455102 | MS.gene38106:CDS |
| CATTTACTAAGGAAAAGTTT+AGG | 0.445102 | 5.1:-78453494 | None:intergenic |
| AAAAGTAACCATACCTATGC+TGG | 0.448298 | 5.1:-78452639 | None:intergenic |
| CAAACTCGAGCTGCAGCAAA+AGG | 0.449356 | 5.1:+78450758 | MS.gene38106:CDS |
| CATAACCAGCTTTCTTCAAG+TGG | 0.460935 | 5.1:-78451783 | None:intergenic |
| TTGTTTGATCTTGCTAAAGA+TGG | 0.461184 | 5.1:+78450947 | MS.gene38106:CDS |
| CATCAGTAATCTCTTTACCT+TGG | 0.462922 | 5.1:-78454562 | None:intergenic |
| AGCGAGCCATTAACACAAAA+CGG | 0.464056 | 5.1:+78451118 | MS.gene38106:CDS |
| AGCAAATATGGTTCTTGAGC+AGG | 0.464906 | 5.1:+78452525 | MS.gene38106:CDS |
| TTATTAATGTTGCTGTTCCT+GGG | 0.467543 | 5.1:+78451085 | MS.gene38106:CDS |
| TGCTTCCAATTGACAGATCC+AGG | 0.469124 | 5.1:-78453396 | None:intergenic |
| GTTACCAGCAACATTTACTA+AGG | 0.474649 | 5.1:-78453505 | None:intergenic |
| CTGAATTGAGGCCAAGGGTG+TGG | 0.475848 | 5.1:-78451170 | None:intergenic |
| AATTTCCACTTGAAGAAAGC+TGG | 0.477622 | 5.1:+78451778 | MS.gene38106:CDS |
| ACCATATTTGCTCTTTCTGT+CGG | 0.484244 | 5.1:-78452514 | None:intergenic |
| AAATTTCTCATCTGATGTAA+AGG | 0.484697 | 5.1:+78451819 | MS.gene38106:CDS |
| TCACTTATGGTCAAGGCAGA+TGG | 0.486966 | 5.1:-78452490 | None:intergenic |
| ACAAATGCAAGATTAAGGTT+AGG | 0.489655 | 5.1:-78452604 | None:intergenic |
| AAACTCCAGTTGACCACCCT+TGG | 0.493668 | 5.1:-78455090 | None:intergenic |
| AAAGATGCCATTTCGGAAAG+TGG | 0.495109 | 5.1:+78453437 | MS.gene38106:CDS |
| CAATCGGGTCGTGTTGTTGT+GGG | 0.495264 | 5.1:+78450000 | MS.gene38106:CDS |
| TCGCCATCTGCTGAAGCTAC+AGG | 0.496898 | 5.1:-78455681 | None:intergenic |
| CAATAGCCTTTGCTGAATTG+AGG | 0.498086 | 5.1:-78451182 | None:intergenic |
| TCTGATTTCACAAATAATCA+AGG | 0.499124 | 5.1:+78451365 | MS.gene38106:CDS |
| TTCAATTTCTTGAAAATGGG+AGG | 0.499738 | 5.1:-78450030 | None:intergenic |
| GCTGGTAACGATATTGTTCA+AGG | 0.500025 | 5.1:+78453519 | MS.gene38106:CDS |
| AGACTCTGGATCAACAGTCT+TGG | 0.504040 | 5.1:+78453191 | MS.gene38106:CDS |
| TCAATCGGGTCGTGTTGTTG+TGG | 0.506562 | 5.1:+78449999 | MS.gene38106:CDS |
| ACTCCAAAGGACATAGTTGA+AGG | 0.507026 | 5.1:+78452577 | MS.gene38106:CDS |
| CACTTATGGTCAAGGCAGAT+GGG | 0.511464 | 5.1:-78452489 | None:intergenic |
| ATCTGAAATGGAGAGTTTCA+AGG | 0.513085 | 5.1:+78454634 | MS.gene38106:CDS |
| CGAAATGGCATCTTTATAGG+AGG | 0.519018 | 5.1:-78453429 | None:intergenic |
| TTAGTTACTAAAGGGGAGAC+TGG | 0.520211 | 5.1:+78455111 | MS.gene38106:CDS |
| GCGAGCCATTAACACAAAAC+GGG | 0.525388 | 5.1:+78451119 | MS.gene38106:CDS |
| GTTCTTGATAAGGTTTCACC+TGG | 0.533370 | 5.1:+78453378 | MS.gene38106:CDS |
| GACAAAATGGCAGGATGTGG+AGG | 0.537970 | 5.1:+78451711 | MS.gene38106:intron |
| TCCACTAATTCCAAAAGTTG+AGG | 0.538135 | 5.1:-78451569 | None:intergenic |
| TTTGAGCGCTGTGGAGCCAA+GGG | 0.539077 | 5.1:+78455074 | MS.gene38106:CDS |
| CTGATGATGCACAGACATCT+CGG | 0.539124 | 5.1:+78453153 | MS.gene38106:CDS |
| TATCTGCTAGCATCATGTAC+TGG | 0.540376 | 5.1:+78455616 | MS.gene38106:CDS |
| GGTACACAGGATATGGTTGA+AGG | 0.543260 | 5.1:+78451225 | MS.gene38106:CDS |
| CTCAAGGAAGAAAATTCCGT+TGG | 0.548350 | 5.1:-78455049 | None:intergenic |
| TGGATCTGTCAATTGGAAGC+AGG | 0.548732 | 5.1:+78453398 | MS.gene38106:CDS |
| CAAAACGGGATCTTAATCCA+TGG | 0.551814 | 5.1:+78451133 | MS.gene38106:CDS |
| TGATGATGCACAGACATCTC+GGG | 0.552373 | 5.1:+78453154 | MS.gene38106:CDS |
| CTTACCTCGATTATGTCCTC+AGG | 0.553465 | 5.1:-78455351 | None:intergenic |
| TGCAATTAATGAATCTGAGA+AGG | 0.554719 | 5.1:+78450838 | MS.gene38106:CDS |
| GCTCTTGCTCCAGAAACTGC+AGG | 0.556106 | 5.1:+78452466 | MS.gene38106:CDS |
| CAACTATGTCCTTTGGAGTG+AGG | 0.559053 | 5.1:-78452573 | None:intergenic |
| GCTCGCTCATCTATTGTCCC+AGG | 0.564121 | 5.1:-78451102 | None:intergenic |
| CCACAGCGCTCAAAAGCTCA+AGG | 0.565969 | 5.1:-78455065 | None:intergenic |
| TGTCGGATCACTTATGGTCA+AGG | 0.567674 | 5.1:-78452497 | None:intergenic |
| TTCAATAAAACCTTGTCCGG+TGG | 0.569867 | 5.1:-78451748 | None:intergenic |
| TCACCTGTAGCTTCAGCAGA+TGG | 0.571305 | 5.1:+78455678 | MS.gene38106:CDS |
| TATCAGTTTACCACCGGACA+AGG | 0.571953 | 5.1:+78451738 | MS.gene38106:CDS |
| AATAACAAAGTGAAGAAAGC+CGG | 0.571985 | 5.1:+78454605 | MS.gene38106:CDS |
| GAGCGCTGTGGAGCCAAGGG+TGG | 0.578582 | 5.1:+78455077 | MS.gene38106:CDS |
| CCTTTGCTGAATTGAGGCCA+AGG | 0.582536 | 5.1:-78451176 | None:intergenic |
| ACTGCCAGCTTAAGGAGAGT+TGG | 0.583296 | 5.1:-78455769 | None:intergenic |
| ATCAGTCATCATCTCAGCGA+AGG | 0.585154 | 5.1:-78453135 | None:intergenic |
| CAGGATAAGAATCTTTCCAA+CGG | 0.585427 | 5.1:+78455033 | MS.gene38106:intron |
| AGGAATGAAAACCACACCCT+TGG | 0.586456 | 5.1:+78451159 | MS.gene38106:CDS |
| CGAGCTGCAGCAAAAGGTGG+CGG | 0.589232 | 5.1:+78450764 | MS.gene38106:CDS |
| TCAAACAATGCATTTGTAGA+CGG | 0.593212 | 5.1:-78450932 | None:intergenic |
| GGAGCTTATCAGTTTACCAC+CGG | 0.595643 | 5.1:+78451732 | MS.gene38106:CDS |
| GTATCTGAAAGAACTCAATC+GGG | 0.598331 | 5.1:+78449985 | MS.gene38106:CDS |
| TGATGCTGATATACTAAACT+GGG | 0.599993 | 5.1:+78454580 | MS.gene38106:CDS |
| CTGGTAACGATATTGTTCAA+GGG | 0.602831 | 5.1:+78453520 | MS.gene38106:CDS |
| AAAAGAGCTCACCCTAAGGA+AGG | 0.609760 | 5.1:-78450142 | None:intergenic |
| CTTTGCTGAATTGAGGCCAA+GGG | 0.610450 | 5.1:-78451175 | None:intergenic |
| ACTCGAGCTGCAGCAAAAGG+TGG | 0.613169 | 5.1:+78450761 | MS.gene38106:CDS |
| CTGGAGTTTAGTTACTAAAG+GGG | 0.614933 | 5.1:+78455104 | MS.gene38106:CDS |
| GGGATCTTAATCCATGGGAG+AGG | 0.619723 | 5.1:+78451139 | MS.gene38106:CDS |
| AGTGGTTAATATTGGTACAC+AGG | 0.622990 | 5.1:+78451212 | MS.gene38106:CDS |
| AAAACGGGATCTTAATCCAT+GGG | 0.623930 | 5.1:+78451134 | MS.gene38106:CDS |
| TGAAACAGATTTAGTCAATG+AGG | 0.625097 | 5.1:+78455707 | MS.gene38106:CDS |
| CTCCAAAGGACATAGTTGAA+GGG | 0.634932 | 5.1:+78452578 | MS.gene38106:CDS |
| CCTTGGCCTCAATTCAGCAA+AGG | 0.637065 | 5.1:+78451176 | MS.gene38106:CDS |
| CAAGAGATACCTCACTCCAA+AGG | 0.644053 | 5.1:+78452564 | MS.gene38106:CDS |
| AACTTGAGATCACACTCCCA+AGG | 0.664816 | 5.1:+78454545 | MS.gene38106:CDS |
| GTTACCTGAGGACATAATCG+AGG | 0.704443 | 5.1:+78455347 | MS.gene38106:CDS |
| AAAGGCTATTGGGTGCACAG+TGG | 0.746180 | 5.1:+78451194 | MS.gene38106:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTATTTTCTTTTTTC+AGG | + | chr5.1:78455014-78455033 | MS.gene38106:intron | 10.0% |
| !!! | TTATACATTAAGAATATTTT+GGG | + | chr5.1:78452699-78452718 | MS.gene38106:intron | 10.0% |
| !!! | TTTATACATTAAGAATATTT+TGG | + | chr5.1:78452698-78452717 | MS.gene38106:intron | 10.0% |
| !! | AATAAATCTAAAAAATGTGT+TGG | - | chr5.1:78454996-78455015 | None:intergenic | 15.0% |
| !! | TAAATAAAATGAACCAATAA+GGG | - | chr5.1:78452979-78452998 | None:intergenic | 15.0% |
| !! | TTATTTGTAAGTAACTTTAT+AGG | + | chr5.1:78450671-78450690 | MS.gene38106:intron | 15.0% |
| !!! | ATTCATAATATAAACTGTTT+TGG | - | chr5.1:78454731-78454750 | None:intergenic | 15.0% |
| !!! | TATACATTAAGAATATTTTG+GGG | + | chr5.1:78452700-78452719 | MS.gene38106:intron | 15.0% |
| !!! | TCATTTTATTTACATTTACT+GGG | + | chr5.1:78452987-78453006 | MS.gene38106:intron | 15.0% |
| !!! | TTCATTTTATTTACATTTAC+TGG | + | chr5.1:78452986-78453005 | MS.gene38106:intron | 15.0% |
| !!! | TTTTCAGATTTATGATAAAT+CGG | + | chr5.1:78453576-78453595 | MS.gene38106:intron | 15.0% |
| !! | AATAAAGTATGGTATAATCT+AGG | - | chr5.1:78455515-78455534 | None:intergenic | 20.0% |
| !! | AATAGAATTGATCTTATGTT+TGG | - | chr5.1:78450999-78451018 | None:intergenic | 20.0% |
| !! | ATCATGTAAATATATAATGC+TGG | + | chr5.1:78451923-78451942 | MS.gene38106:intron | 20.0% |
| !! | ATGAAATAACAAGAACATAT+CGG | - | chr5.1:78453698-78453717 | None:intergenic | 20.0% |
| !! | ATGAATAATAGAAATCAGAA+TGG | - | chr5.1:78451448-78451467 | None:intergenic | 20.0% |
| !! | ATTATCATCAATAGCTAAAT+CGG | - | chr5.1:78455736-78455755 | None:intergenic | 20.0% |
| !! | GGTTCAATGAAAAAATTAAA+AGG | - | chr5.1:78453303-78453322 | None:intergenic | 20.0% |
| !! | GTAAATAAAATGAACCAATA+AGG | - | chr5.1:78452980-78452999 | None:intergenic | 20.0% |
| !! | TATACTAAGATATAATGAAC+CGG | - | chr5.1:78452847-78452866 | None:intergenic | 20.0% |
| !! | TATATAATATAACATAGCTC+CGG | + | chr5.1:78451985-78452004 | MS.gene38106:intron | 20.0% |
| !! | TCATGTAAATATATAATGCT+GGG | + | chr5.1:78451924-78451943 | MS.gene38106:intron | 20.0% |
| !! | TGTTATAAAATCAACTTCAA+TGG | + | chr5.1:78455460-78455479 | MS.gene38106:intron | 20.0% |
| !! | TGTTCATTTGAAAAATAGAA+GGG | + | chr5.1:78450457-78450476 | MS.gene38106:intron | 20.0% |
| !! | TTCTGATTTCTATTATTCAT+TGG | + | chr5.1:78451448-78451467 | MS.gene38106:intron | 20.0% |
| !!! | AAAGCTTTAGAATAAAGAAA+AGG | + | chr5.1:78454912-78454931 | MS.gene38106:intron | 20.0% |
| !!! | CAAAAGTATACTTTCAAATT+AGG | - | chr5.1:78450611-78450630 | None:intergenic | 20.0% |
| !!! | CATTAAATTTTGAAACTGAT+GGG | + | chr5.1:78454167-78454186 | MS.gene38106:intron | 20.0% |
| !!! | TTATTTCTTTTTTCACAGAT+GGG | + | chr5.1:78453344-78453363 | MS.gene38106:intron | 20.0% |
| ! | AAATTTCTCATCTGATGTAA+AGG | + | chr5.1:78451819-78451838 | MS.gene38106:CDS | 25.0% |
| ! | ACTGTTCAATGTTTAACAAA+GGG | + | chr5.1:78454935-78454954 | MS.gene38106:intron | 25.0% |
| ! | AGGCCAATAAAAAAAATTAG+AGG | - | chr5.1:78452786-78452805 | None:intergenic | 25.0% |
| ! | ATCTATAATGTTACAGAAGA+AGG | - | chr5.1:78454093-78454112 | None:intergenic | 25.0% |
| ! | ATGAAAAGGAAAGAATATCA+CGG | - | chr5.1:78451650-78451669 | None:intergenic | 25.0% |
| ! | ATGGTTAAAAACGATGATAA+AGG | - | chr5.1:78454345-78454364 | None:intergenic | 25.0% |
| ! | ATTTAGTAAATCAGAACAAC+AGG | - | chr5.1:78452194-78452213 | None:intergenic | 25.0% |
| ! | CAATGATCAAGAAATCAAAA+TGG | - | chr5.1:78449906-78449925 | None:intergenic | 25.0% |
| ! | CATCTGTGAAAAAAGAAATA+AGG | - | chr5.1:78453345-78453364 | None:intergenic | 25.0% |
| ! | CATGTATGCATATTATCTTA+AGG | + | chr5.1:78454700-78454719 | MS.gene38106:intron | 25.0% |
| ! | CATTTACTAAGGAAAAGTTT+AGG | - | chr5.1:78453497-78453516 | None:intergenic | 25.0% |
| ! | CTATAACTAAGAACAAAAAG+AGG | - | chr5.1:78454023-78454042 | None:intergenic | 25.0% |
| ! | CTCTATTATATAGAAACAGA+GGG | + | chr5.1:78450362-78450381 | MS.gene38106:intron | 25.0% |
| ! | CTTCATATGTTATGACAAAA+TGG | + | chr5.1:78451698-78451717 | MS.gene38106:intron | 25.0% |
| ! | GAAATATTATAACCGAAGAA+TGG | + | chr5.1:78454195-78454214 | MS.gene38106:intron | 25.0% |
| ! | GCAACCAAGTTATAAAAATT+GGG | + | chr5.1:78453466-78453485 | MS.gene38106:CDS | 25.0% |
| ! | GCATTTGCATATATCATATT+TGG | + | chr5.1:78454782-78454801 | MS.gene38106:intron | 25.0% |
| ! | GTGTTCATTTGAAAAATAGA+AGG | + | chr5.1:78450456-78450475 | MS.gene38106:intron | 25.0% |
| ! | GTTAAAAAAACTGTCTTTCT+AGG | + | chr5.1:78454048-78454067 | MS.gene38106:intron | 25.0% |
| ! | GTTCATTTGAAAAATAGAAG+GGG | + | chr5.1:78450458-78450477 | MS.gene38106:intron | 25.0% |
| ! | GTTTCATTTAAGCAAAACTA+AGG | + | chr5.1:78450394-78450413 | MS.gene38106:intron | 25.0% |
| ! | TAGACTATAACTTTCTCTTT+AGG | + | chr5.1:78452903-78452922 | MS.gene38106:intron | 25.0% |
| ! | TATAACTGAAGATAACCAAT+AGG | + | chr5.1:78453671-78453690 | MS.gene38106:intron | 25.0% |
| ! | TCCAAAAAAAGATACTCAAA+AGG | - | chr5.1:78452806-78452825 | None:intergenic | 25.0% |
| ! | TCTATTAGAAGTTCTTGATA+AGG | + | chr5.1:78453368-78453387 | MS.gene38106:CDS | 25.0% |
| ! | TCTGATTTCACAAATAATCA+AGG | + | chr5.1:78451365-78451384 | MS.gene38106:CDS | 25.0% |
| ! | TCTTCTGTAACATTATAGAT+GGG | + | chr5.1:78454093-78454112 | MS.gene38106:intron | 25.0% |
| ! | TGAAATAACAAGAACATATC+GGG | - | chr5.1:78453697-78453716 | None:intergenic | 25.0% |
| ! | TGCAACCAAGTTATAAAAAT+TGG | + | chr5.1:78453465-78453484 | MS.gene38106:CDS | 25.0% |
| ! | TGGTTAAAAACGATGATAAA+GGG | - | chr5.1:78454344-78454363 | None:intergenic | 25.0% |
| ! | TTATGATAAATCGGTATTGT+TGG | + | chr5.1:78453585-78453604 | MS.gene38106:intron | 25.0% |
| ! | TTCTTCTGTAACATTATAGA+TGG | + | chr5.1:78454092-78454111 | MS.gene38106:intron | 25.0% |
| ! | TTTAAGTCTGTCAAAATTCA+GGG | - | chr5.1:78451288-78451307 | None:intergenic | 25.0% |
| ! | TTTAGTAAATCAGAACAACA+GGG | - | chr5.1:78452193-78452212 | None:intergenic | 25.0% |
| !! | ACCTTTTCCCAATAAAAAAA+AGG | - | chr5.1:78452758-78452777 | None:intergenic | 25.0% |
| !! | ATTGAATACTTTCTTTTTGC+AGG | + | chr5.1:78452414-78452433 | MS.gene38106:intron | 25.0% |
| !! | ATTTTTCCAACAAATAAGAG+TGG | + | chr5.1:78450430-78450449 | MS.gene38106:intron | 25.0% |
| !! | TATATTAGACCTTATTTCCA+TGG | + | chr5.1:78453760-78453779 | MS.gene38106:intron | 25.0% |
| !! | TTATGTCAATAATGTTTTCG+AGG | + | chr5.1:78453223-78453242 | MS.gene38106:CDS | 25.0% |
| !! | TTTCTCTTTAGGAAAAAAAG+AGG | + | chr5.1:78452914-78452933 | MS.gene38106:intron | 25.0% |
| !! | TTTTGTCATAACATATGAAG+AGG | - | chr5.1:78451698-78451717 | None:intergenic | 25.0% |
| !!! | AAGTTCTTCTTCATTTTTGA+AGG | + | chr5.1:78450793-78450812 | MS.gene38106:CDS | 25.0% |
| !!! | AGTATCTTTTTTTGGATGAA+GGG | + | chr5.1:78452810-78452829 | MS.gene38106:intron | 25.0% |
| !!! | CTCTGTTTCTATATAATAGA+GGG | - | chr5.1:78450363-78450382 | None:intergenic | 25.0% |
| !!! | CTTATTTCTTTTTTCACAGA+TGG | + | chr5.1:78453343-78453362 | MS.gene38106:intron | 25.0% |
| !!! | GCATTAAATTTTGAAACTGA+TGG | + | chr5.1:78454166-78454185 | MS.gene38106:intron | 25.0% |
| !!! | GCTCCTCTAATTTTTTTTAT+TGG | + | chr5.1:78452780-78452799 | MS.gene38106:intron | 25.0% |
| !!! | GCTGAGAAATTTTATTTTTG+TGG | + | chr5.1:78455537-78455556 | MS.gene38106:intron | 25.0% |
| !!! | GTCATATGCTATTTTGATTT+AGG | + | chr5.1:78450293-78450312 | MS.gene38106:intron | 25.0% |
| !!! | TCCTTTGCCTTTTTTTTATT+GGG | + | chr5.1:78452748-78452767 | MS.gene38106:intron | 25.0% |
| !!! | TCTGTTTCTATATAATAGAG+GGG | - | chr5.1:78450362-78450381 | None:intergenic | 25.0% |
| !!! | TGTTCTTGTTATTTCATACA+AGG | + | chr5.1:78453701-78453720 | MS.gene38106:intron | 25.0% |
| !!! | TGTTTATTTGTAGCCTTATT+TGG | + | chr5.1:78451335-78451354 | MS.gene38106:intron | 25.0% |
| !!! | TTCCTTTGCCTTTTTTTTAT+TGG | + | chr5.1:78452747-78452766 | MS.gene38106:intron | 25.0% |
| AACTGGAGTTTAGTTACTAA+AGG | + | chr5.1:78455102-78455121 | MS.gene38106:CDS | 30.0% | |
| AAGAGAAAGTTATAGTCTAG+TGG | - | chr5.1:78452902-78452921 | None:intergenic | 30.0% | |
| AATAACAAAGTGAAGAAAGC+CGG | + | chr5.1:78454605-78454624 | MS.gene38106:CDS | 30.0% | |
| AATATCAGTATACTCAGAAC+TGG | - | chr5.1:78454678-78454697 | None:intergenic | 30.0% | |
| ACAAATGCAAGATTAAGGTT+AGG | - | chr5.1:78452607-78452626 | None:intergenic | 30.0% | |
| ACTAAGAACAAAAAGAGGAA+AGG | - | chr5.1:78454018-78454037 | None:intergenic | 30.0% | |
| ACTGGAGTTTAGTTACTAAA+GGG | + | chr5.1:78455103-78455122 | MS.gene38106:CDS | 30.0% | |
| AGATGTAAACAGATACAACA+TGG | + | chr5.1:78452364-78452383 | MS.gene38106:intron | 30.0% | |
| AGCCTTCAATTTCTTGAAAA+TGG | - | chr5.1:78450037-78450056 | None:intergenic | 30.0% | |
| ATAAAGTGAGTATCATCTTC+TGG | - | chr5.1:78455599-78455618 | None:intergenic | 30.0% | |
| ATATGTTATGACAAAATGGC+AGG | + | chr5.1:78451702-78451721 | MS.gene38106:intron | 30.0% | |
| ATCAGTAATCTCTTTACCTT+GGG | - | chr5.1:78454564-78454583 | None:intergenic | 30.0% | |
| ATGAGAAGTTACTGAAAAGT+AGG | + | chr5.1:78453942-78453961 | MS.gene38106:intron | 30.0% | |
| ATGGCATACATATCACATAA+TGG | + | chr5.1:78452949-78452968 | MS.gene38106:intron | 30.0% | |
| ATGTCAATAAATAAGCTACC+AGG | - | chr5.1:78450713-78450732 | None:intergenic | 30.0% | |
| ATTTAAGCAAAACTAAGGTG+AGG | + | chr5.1:78450399-78450418 | MS.gene38106:intron | 30.0% | |
| ATTTATTGACATTGAGTGGT+AGG | + | chr5.1:78450721-78450740 | MS.gene38106:intron | 30.0% | |
| CATTTCAATAAAACCTTGTC+CGG | - | chr5.1:78451754-78451773 | None:intergenic | 30.0% | |
| CCAAGTTATAAAAATTGGGA+AGG | + | chr5.1:78453470-78453489 | MS.gene38106:CDS | 30.0% | |
| CCTCTATTATATAGAAACAG+AGG | + | chr5.1:78450361-78450380 | MS.gene38106:intron | 30.0% | |
| CTGTTCAATGTTTAACAAAG+GGG | + | chr5.1:78454936-78454955 | MS.gene38106:intron | 30.0% | |
| GACTGTTCAATGTTTAACAA+AGG | + | chr5.1:78454934-78454953 | MS.gene38106:intron | 30.0% | |
| GCCTTCAATTTCTTGAAAAT+GGG | - | chr5.1:78450036-78450055 | None:intergenic | 30.0% | |
| GCTTATTTATTGACATTGAG+TGG | + | chr5.1:78450717-78450736 | MS.gene38106:intron | 30.0% | |
| GTATGCATATTATCTTAAGG+CGG | + | chr5.1:78454703-78454722 | MS.gene38106:intron | 30.0% | |
| GTTTAAGTCTGTCAAAATTC+AGG | - | chr5.1:78451289-78451308 | None:intergenic | 30.0% | |
| TAATATTGGTACACAGGATA+TGG | + | chr5.1:78451218-78451237 | MS.gene38106:CDS | 30.0% | |
| TAGAAGAAATAGCACGATAA+TGG | + | chr5.1:78450224-78450243 | MS.gene38106:intron | 30.0% | |
| TAGAGTTAGGAAATGTATAG+AGG | + | chr5.1:78453037-78453056 | MS.gene38106:intron | 30.0% | |
| TCAAACAATGCATTTGTAGA+CGG | - | chr5.1:78450935-78450954 | None:intergenic | 30.0% | |
| TCATCTTATGCAAGTGAAAA+TGG | - | chr5.1:78451408-78451427 | None:intergenic | 30.0% | |
| TCCATGAAAAATCAACTTCA+TGG | + | chr5.1:78455418-78455437 | MS.gene38106:intron | 30.0% | |
| TCCCAATAAAAAAAAGGCAA+AGG | - | chr5.1:78452752-78452771 | None:intergenic | 30.0% | |
| TGAAACAGATTTAGTCAATG+AGG | + | chr5.1:78455707-78455726 | MS.gene38106:CDS | 30.0% | |
| TGAACTGTAGAATGAAATTG+AGG | + | chr5.1:78452122-78452141 | MS.gene38106:intron | 30.0% | |
| TGATGCTGATATACTAAACT+GGG | + | chr5.1:78454580-78454599 | MS.gene38106:CDS | 30.0% | |
| TGATTTCTTGATCATTGATG+AGG | + | chr5.1:78449909-78449928 | MS.gene38106:intron | 30.0% | |
| TGCAATTAATGAATCTGAGA+AGG | + | chr5.1:78450838-78450857 | MS.gene38106:CDS | 30.0% | |
| TGGAAAGACTTCTTAACTTA+TGG | + | chr5.1:78451468-78451487 | MS.gene38106:intron | 30.0% | |
| TGGCATACATATCACATAAT+GGG | + | chr5.1:78452950-78452969 | MS.gene38106:intron | 30.0% | |
| TGTATCTGAAAGAACTCAAT+CGG | + | chr5.1:78449984-78450003 | MS.gene38106:CDS | 30.0% | |
| TTAAGTCTGTCAAAATTCAG+GGG | - | chr5.1:78451287-78451306 | None:intergenic | 30.0% | |
| TTAGTAAATCAGAACAACAG+GGG | - | chr5.1:78452192-78452211 | None:intergenic | 30.0% | |
| TTCAATTTCTTGAAAATGGG+AGG | - | chr5.1:78450033-78450052 | None:intergenic | 30.0% | |
| TTGTTTGATCTTGCTAAAGA+TGG | + | chr5.1:78450947-78450966 | MS.gene38106:CDS | 30.0% | |
| TTTAAGCAAAACTAAGGTGA+GGG | + | chr5.1:78450400-78450419 | MS.gene38106:intron | 30.0% | |
| TTTGATTCAAATGTCTGTGT+GGG | + | chr5.1:78450634-78450653 | MS.gene38106:intron | 30.0% | |
| ! | AAATTAAAAGGCAGAAGTAC+AGG | - | chr5.1:78453291-78453310 | None:intergenic | 30.0% |
| ! | AATACTTTCTTTTTGCAGGA+TGG | + | chr5.1:78452418-78452437 | MS.gene38106:intron | 30.0% |
| ! | AGTTAGCTTCAATTTCTTGA+AGG | - | chr5.1:78455155-78455174 | None:intergenic | 30.0% |
| ! | ATAAAATTGCAGTTTCGAGT+TGG | - | chr5.1:78453909-78453928 | None:intergenic | 30.0% |
| ! | ATTTTCACTTGCATAAGATG+AGG | + | chr5.1:78451407-78451426 | MS.gene38106:intron | 30.0% |
| ! | ATTTTGCATTTAACCTTGAC+AGG | + | chr5.1:78455569-78455588 | MS.gene38106:intron | 30.0% |
| ! | CCTTCCCAATTTTTATAACT+TGG | - | chr5.1:78453473-78453492 | None:intergenic | 30.0% |
| ! | TCTTTAGGAAAAAAAGAGGA+CGG | + | chr5.1:78452918-78452937 | MS.gene38106:intron | 30.0% |
| ! | TTATTAATGTTGCTGTTCCT+GGG | + | chr5.1:78451085-78451104 | MS.gene38106:CDS | 30.0% |
| ! | TTGTCTGTCTTTTCATTCTT+TGG | + | chr5.1:78451501-78451520 | MS.gene38106:intron | 30.0% |
| ! | TTTTACTGAGGATGAGATTA+AGG | + | chr5.1:78450068-78450087 | MS.gene38106:CDS | 30.0% |
| ! | TTTTCACTTGCATAAGATGA+GGG | + | chr5.1:78451408-78451427 | MS.gene38106:intron | 30.0% |
| ! | TTTTCCTTAGTAAATGTTGC+TGG | + | chr5.1:78453501-78453520 | MS.gene38106:CDS | 30.0% |
| ! | TTTTTCATTGAACCAACTAC+TGG | + | chr5.1:78453309-78453328 | MS.gene38106:intron | 30.0% |
| !! | ACCATGAAGTTGATTTTTCA+TGG | - | chr5.1:78455422-78455441 | None:intergenic | 30.0% |
| !! | CCTCTGTTTCTATATAATAG+AGG | - | chr5.1:78450364-78450383 | None:intergenic | 30.0% |
| !! | GCCTTTTGAGTATCTTTTTT+TGG | + | chr5.1:78452802-78452821 | MS.gene38106:intron | 30.0% |
| !! | TCCCATTTTCAAGAAATTGA+AGG | + | chr5.1:78450032-78450051 | MS.gene38106:CDS | 30.0% |
| !! | TTTTGATTCAAATGTCTGTG+TGG | + | chr5.1:78450633-78450652 | MS.gene38106:intron | 30.0% |
| !!! | CTTCATGGTTTTGTTAAGTT+TGG | + | chr5.1:78455433-78455452 | MS.gene38106:intron | 30.0% |
| !!! | GAGTATCTTTTTTTGGATGA+AGG | + | chr5.1:78452809-78452828 | MS.gene38106:intron | 30.0% |
| !!! | GCCTTTTTTTTATTGGGAAA+AGG | + | chr5.1:78452754-78452773 | MS.gene38106:intron | 30.0% |
| AAAACGGGATCTTAATCCAT+GGG | + | chr5.1:78451134-78451153 | MS.gene38106:CDS | 35.0% | |
| AAAACTACTGAACACTGTCA+AGG | - | chr5.1:78452254-78452273 | None:intergenic | 35.0% | |
| AAAAGTAACCATACCTATGC+TGG | - | chr5.1:78452642-78452661 | None:intergenic | 35.0% | |
| AAGGACAGCAGAAGATAAAA+AGG | - | chr5.1:78452235-78452254 | None:intergenic | 35.0% | |
| AATTTCCACTTGAAGAAAGC+TGG | + | chr5.1:78451778-78451797 | MS.gene38106:CDS | 35.0% | |
| ACCATATTTGCTCTTTCTGT+CGG | - | chr5.1:78452517-78452536 | None:intergenic | 35.0% | |
| ACTCATAGTACTTCAGGATT+TGG | + | chr5.1:78452085-78452104 | MS.gene38106:intron | 35.0% | |
| ACTGTAGAATGAAATTGAGG+AGG | + | chr5.1:78452125-78452144 | MS.gene38106:intron | 35.0% | |
| AGGACAGCAGAAGATAAAAA+GGG | - | chr5.1:78452234-78452253 | None:intergenic | 35.0% | |
| AGTAGTGCAGTTATAGAGTT+AGG | + | chr5.1:78453024-78453043 | MS.gene38106:intron | 35.0% | |
| AGTGGTTAATATTGGTACAC+AGG | + | chr5.1:78451212-78451231 | MS.gene38106:CDS | 35.0% | |
| ATCAGACCAAGTACCAAATA+AGG | - | chr5.1:78451351-78451370 | None:intergenic | 35.0% | |
| ATCTGATTTACTCACAGACT+AGG | + | chr5.1:78454243-78454262 | MS.gene38106:intron | 35.0% | |
| ATTGTGGCTTTCATTTCTGT+AGG | + | chr5.1:78453081-78453100 | MS.gene38106:intron | 35.0% | |
| ATTTGCACTTATCTACTACG+AGG | - | chr5.1:78450505-78450524 | None:intergenic | 35.0% | |
| CAGGATAAGAATCTTTCCAA+CGG | + | chr5.1:78455033-78455052 | MS.gene38106:intron | 35.0% | |
| CATCACTTGCTTTCTTAACA+TGG | + | chr5.1:78452030-78452049 | MS.gene38106:intron | 35.0% | |
| CATCAGTAATCTCTTTACCT+TGG | - | chr5.1:78454565-78454584 | None:intergenic | 35.0% | |
| CATGTTAAGAAAGCAAGTGA+TGG | - | chr5.1:78452032-78452051 | None:intergenic | 35.0% | |
| CTAAATCAGTGAAGAAACTG+TGG | + | chr5.1:78452208-78452227 | MS.gene38106:intron | 35.0% | |
| CTGATGCTGATATACTAAAC+TGG | + | chr5.1:78454579-78454598 | MS.gene38106:CDS | 35.0% | |
| CTGATTACTGAATCATTGTG+TGG | + | chr5.1:78452311-78452330 | MS.gene38106:intron | 35.0% | |
| CTGGAGTTTAGTTACTAAAG+GGG | + | chr5.1:78455104-78455123 | MS.gene38106:CDS | 35.0% | |
| GCTTTCATTTCTGTAGGAAT+GGG | + | chr5.1:78453087-78453106 | MS.gene38106:intron | 35.0% | |
| GGAAGATGATAAGGTGATAT+TGG | + | chr5.1:78451589-78451608 | MS.gene38106:intron | 35.0% | |
| GGAATTAGTGGAAGATGATA+AGG | + | chr5.1:78451580-78451599 | MS.gene38106:CDS | 35.0% | |
| GGTATTATCTATACTGAACC+TGG | + | chr5.1:78450692-78450711 | MS.gene38106:intron | 35.0% | |
| GTATCTGAAAGAACTCAATC+GGG | + | chr5.1:78449985-78450004 | MS.gene38106:CDS | 35.0% | |
| GTGCAACAAATGCAAGATTA+AGG | - | chr5.1:78452612-78452631 | None:intergenic | 35.0% | |
| GTTACCAGCAACATTTACTA+AGG | - | chr5.1:78453508-78453527 | None:intergenic | 35.0% | |
| GTTAGGAAATGTATAGAGGA+CGG | + | chr5.1:78453041-78453060 | MS.gene38106:intron | 35.0% | |
| TAGGCTCTTAATCCATTCTT+CGG | - | chr5.1:78454210-78454229 | None:intergenic | 35.0% | |
| TATATAATAGAGGGGAGATG+CGG | - | chr5.1:78450354-78450373 | None:intergenic | 35.0% | |
| TATGCAAGTGAAAATGGAGT+AGG | - | chr5.1:78451402-78451421 | None:intergenic | 35.0% | |
| TCAATTCAGCAAAGGCTATT+GGG | + | chr5.1:78451184-78451203 | MS.gene38106:CDS | 35.0% | |
| TCAGATCTTACCTCTCAAAT+AGG | - | chr5.1:78454229-78454248 | None:intergenic | 35.0% | |
| TCCACTAATTCCAAAAGTTG+AGG | - | chr5.1:78451572-78451591 | None:intergenic | 35.0% | |
| TGTCATCTAAGCATACATCA+GGG | - | chr5.1:78450267-78450286 | None:intergenic | 35.0% | |
| TTAAGCAAAACTAAGGTGAG+GGG | + | chr5.1:78450401-78450420 | MS.gene38106:intron | 35.0% | |
| TTCAGTAATCAGCATGTTAC+AGG | - | chr5.1:78452303-78452322 | None:intergenic | 35.0% | |
| TTCCGAAATGGCATCTTTAT+AGG | - | chr5.1:78453435-78453454 | None:intergenic | 35.0% | |
| TTTACTGGGAACAAGTATCT+AGG | + | chr5.1:78453001-78453020 | MS.gene38106:intron | 35.0% | |
| TTTAGGAAAAAAAGAGGACG+GGG | + | chr5.1:78452920-78452939 | MS.gene38106:intron | 35.0% | |
| TTTCTCAGCGCAATAAAGTA+TGG | - | chr5.1:78455526-78455545 | None:intergenic | 35.0% | |
| TTTGAAAAATAGAAGGGGTG+TGG | + | chr5.1:78450463-78450482 | MS.gene38106:intron | 35.0% | |
| TTTGTGTATTCTACACACAC+CGG | - | chr5.1:78452007-78452026 | None:intergenic | 35.0% | |
| ! | AAAAAGCGCGTAAACGAAAA+AGG | - | chr5.1:78450183-78450202 | None:intergenic | 35.0% |
| ! | AAAAGCGCGTAAACGAAAAA+GGG | - | chr5.1:78450182-78450201 | None:intergenic | 35.0% |
| ! | AAGATCCCGTTTTGTGTTAA+TGG | - | chr5.1:78451127-78451146 | None:intergenic | 35.0% |
| ! | AATGGAACATCCAAGTTTTC+TGG | - | chr5.1:78455322-78455341 | None:intergenic | 35.0% |
| ! | ATAAAGGGAGAGAAAGGTAT+AGG | - | chr5.1:78454329-78454348 | None:intergenic | 35.0% |
| ! | ATCTGAAATGGAGAGTTTCA+AGG | + | chr5.1:78454634-78454653 | MS.gene38106:CDS | 35.0% |
| ! | ATTGAACCAACTACTGGTTA+TGG | + | chr5.1:78453315-78453334 | MS.gene38106:intron | 35.0% |
| ! | CAAATTTTCCAGCATAGGTA+TGG | + | chr5.1:78452631-78452650 | MS.gene38106:intron | 35.0% |
| ! | CAAGAAATTGAAGGCTTTTG+CGG | + | chr5.1:78450041-78450060 | MS.gene38106:CDS | 35.0% |
| ! | CACTAACCACTCTTATTTGT+TGG | - | chr5.1:78450439-78450458 | None:intergenic | 35.0% |
| ! | CTCCTATAAAGATGCCATTT+CGG | + | chr5.1:78453430-78453449 | MS.gene38106:CDS | 35.0% |
| ! | CTGGTAACGATATTGTTCAA+GGG | + | chr5.1:78453520-78453539 | MS.gene38106:CDS | 35.0% |
| ! | CTTATTAATGTTGCTGTTCC+TGG | + | chr5.1:78451084-78451103 | MS.gene38106:CDS | 35.0% |
| ! | CTTTAGGAAAAAAAGAGGAC+GGG | + | chr5.1:78452919-78452938 | MS.gene38106:intron | 35.0% |
| ! | GAAGAAAACTCCTCAACTTT+TGG | + | chr5.1:78451559-78451578 | MS.gene38106:CDS | 35.0% |
| ! | TCTAAGACTCATAGTACTTC+AGG | + | chr5.1:78452079-78452098 | MS.gene38106:intron | 35.0% |
| ! | TGAGTTTTTGTGAAGCCTTA+AGG | - | chr5.1:78454286-78454305 | None:intergenic | 35.0% |
| ! | TGTTTTCTTCAGAATTCAGC+AGG | - | chr5.1:78455644-78455663 | None:intergenic | 35.0% |
| ! | TTAATTCGACTTGAGTGAAC+TGG | - | chr5.1:78449823-78449842 | None:intergenic | 35.0% |
| ! | TTGAAAAATAGAAGGGGTGT+GGG | + | chr5.1:78450464-78450483 | MS.gene38106:intron | 35.0% |
| ! | TTGCACAAATTTTCCAGCAT+AGG | + | chr5.1:78452626-78452645 | MS.gene38106:CDS | 35.0% |
| ! | TTTACTCACAGACTAGGTTT+TGG | + | chr5.1:78454249-78454268 | MS.gene38106:intron | 35.0% |
| ! | TTTTGCGGAGTTTTTTACTG+AGG | + | chr5.1:78450056-78450075 | MS.gene38106:CDS | 35.0% |
| !! | GTGTTCTTGTTTCTGATCAA+TGG | + | chr5.1:78449789-78449808 | MS.gene38106:CDS | 35.0% |
| !! | GTTTTTCAGAAGTTGAAGCA+TGG | - | chr5.1:78454528-78454547 | None:intergenic | 35.0% |
| !! | TGATTTTGAGTCCTTCCTTA+GGG | + | chr5.1:78450131-78450150 | MS.gene38106:CDS | 35.0% |
| !! | TTGATTTTGAGTCCTTCCTT+AGG | + | chr5.1:78450130-78450149 | MS.gene38106:CDS | 35.0% |
| !! | TTGTAGCCTTATTTGGTACT+TGG | + | chr5.1:78451342-78451361 | MS.gene38106:intron | 35.0% |
| !! | TTTTCGAGGATGTCAGAAAT+GGG | + | chr5.1:78453237-78453256 | MS.gene38106:CDS | 35.0% |
| !!! | CGGACAAGGTTTTATTGAAA+TGG | + | chr5.1:78451752-78451771 | MS.gene38106:CDS | 35.0% |
| !!! | GCATAGGTATGGTTACTTTT+AGG | + | chr5.1:78452642-78452661 | MS.gene38106:intron | 35.0% |
| !!! | TAGGTATGGTTACTTTTAGG+AGG | + | chr5.1:78452645-78452664 | MS.gene38106:intron | 35.0% |
| !!! | TCCTCAACTTTTGGAATTAG+TGG | + | chr5.1:78451568-78451587 | MS.gene38106:CDS | 35.0% |
| !!! | TTTGTCCAACAGCTTTTTTG+TGG | + | chr5.1:78454486-78454505 | MS.gene38106:intron | 35.0% |
| AAAGGCAAAGGAAAAGTAGC+AGG | - | chr5.1:78452740-78452759 | None:intergenic | 40.0% | |
| AAGAAAGATGCTTCAGACTC+TGG | + | chr5.1:78453177-78453196 | MS.gene38106:CDS | 40.0% | |
| AAGGAAAAGTAGCAGGTTCT+TGG | - | chr5.1:78452733-78452752 | None:intergenic | 40.0% | |
| ACGATGATAAAGGGAGAGAA+AGG | - | chr5.1:78454335-78454354 | None:intergenic | 40.0% | |
| ACTCCAAAGGACATAGTTGA+AGG | + | chr5.1:78452577-78452596 | MS.gene38106:CDS | 40.0% | |
| AGCAAATATGGTTCTTGAGC+AGG | + | chr5.1:78452525-78452544 | MS.gene38106:CDS | 40.0% | |
| AGCGAGCCATTAACACAAAA+CGG | + | chr5.1:78451118-78451137 | MS.gene38106:CDS | 40.0% | |
| AGGAACTGTGTGTCTGTATT+AGG | + | chr5.1:78453962-78453981 | MS.gene38106:intron | 40.0% | |
| AGGACAAATGTGAACAGGAA+AGG | - | chr5.1:78453271-78453290 | None:intergenic | 40.0% | |
| AGTACAGGACAAATGTGAAC+AGG | - | chr5.1:78453276-78453295 | None:intergenic | 40.0% | |
| ATCAGTGTTGCCAGAAAACT+TGG | + | chr5.1:78455309-78455328 | MS.gene38106:CDS | 40.0% | |
| ATGAAGGGCTTCTTAGTATC+CGG | + | chr5.1:78452825-78452844 | MS.gene38106:intron | 40.0% | |
| CAAAACGGGATCTTAATCCA+TGG | + | chr5.1:78451133-78451152 | MS.gene38106:CDS | 40.0% | |
| CAATAGCCTTTGCTGAATTG+AGG | - | chr5.1:78451185-78451204 | None:intergenic | 40.0% | |
| CATAACCAGCTTTCTTCAAG+TGG | - | chr5.1:78451786-78451805 | None:intergenic | 40.0% | |
| CGAAATGGCATCTTTATAGG+AGG | - | chr5.1:78453432-78453451 | None:intergenic | 40.0% | |
| CGCACACATTAACAGTTACT+TGG | + | chr5.1:78450871-78450890 | MS.gene38106:CDS | 40.0% | |
| CTACACTCACCATGGAAATA+AGG | - | chr5.1:78453772-78453791 | None:intergenic | 40.0% | |
| CTCAAGGAAGAAAATTCCGT+TGG | - | chr5.1:78455052-78455071 | None:intergenic | 40.0% | |
| CTCAATTCAGCAAAGGCTAT+TGG | + | chr5.1:78451183-78451202 | MS.gene38106:CDS | 40.0% | |
| CTCATCTGATGTAAAGGTGA+GGG | + | chr5.1:78451825-78451844 | MS.gene38106:intron | 40.0% | |
| CTCCAAAGGACATAGTTGAA+GGG | + | chr5.1:78452578-78452597 | MS.gene38106:CDS | 40.0% | |
| CTCCATTTCAGATGTTCTTC+CGG | - | chr5.1:78454627-78454646 | None:intergenic | 40.0% | |
| GACATTCTTGTATGTTCTCG+TGG | - | chr5.1:78450529-78450548 | None:intergenic | 40.0% | |
| GCATTTGTAGACGGATCAAT+TGG | - | chr5.1:78450926-78450945 | None:intergenic | 40.0% | |
| GCTTCAATTTCTTGAAGGTG+CGG | - | chr5.1:78455150-78455169 | None:intergenic | 40.0% | |
| GGAAATCCATAACCAGTAGT+TGG | - | chr5.1:78453324-78453343 | None:intergenic | 40.0% | |
| GGAAGAGTCGTATCAGAATA+TGG | + | chr5.1:78450098-78450117 | MS.gene38106:CDS | 40.0% | |
| GGATGAGATTAAGGCTGTAT+TGG | + | chr5.1:78450077-78450096 | MS.gene38106:CDS | 40.0% | |
| GGATTAAGAGCCTATTTGAG+AGG | + | chr5.1:78454216-78454235 | MS.gene38106:intron | 40.0% | |
| GGCTTTCATTTCTGTAGGAA+TGG | + | chr5.1:78453086-78453105 | MS.gene38106:intron | 40.0% | |
| GGGAATAAGAAGCTCTTACT+AGG | + | chr5.1:78453540-78453559 | MS.gene38106:CDS | 40.0% | |
| GTGTCATCTAAGCATACATC+AGG | - | chr5.1:78450268-78450287 | None:intergenic | 40.0% | |
| GTTCTTGATAAGGTTTCACC+TGG | + | chr5.1:78453378-78453397 | MS.gene38106:CDS | 40.0% | |
| TAGATAACGCATGGGAAACA+GGG | - | chr5.1:78454432-78454451 | None:intergenic | 40.0% | |
| TATCGAACGTATGCTATGTG+AGG | - | chr5.1:78452345-78452364 | None:intergenic | 40.0% | |
| TATCTGCTAGCATCATGTAC+TGG | + | chr5.1:78455616-78455635 | MS.gene38106:CDS | 40.0% | |
| TATGACAAAATGGCAGGATG+TGG | + | chr5.1:78451708-78451727 | MS.gene38106:intron | 40.0% | |
| TCCGACAGAAAGAGCAAATA+TGG | + | chr5.1:78452513-78452532 | MS.gene38106:CDS | 40.0% | |
| TCCTATGCTAGATAACGCAT+GGG | - | chr5.1:78454440-78454459 | None:intergenic | 40.0% | |
| TCTATAGCTGATGGAGATTG+TGG | + | chr5.1:78453065-78453084 | MS.gene38106:intron | 40.0% | |
| TCTCATCTGATGTAAAGGTG+AGG | + | chr5.1:78451824-78451843 | MS.gene38106:intron | 40.0% | |
| TCTTTCTGTCGGATCACTTA+TGG | - | chr5.1:78452506-78452525 | None:intergenic | 40.0% | |
| TGTGACGAAGTTCTGTTGAT+TGG | + | chr5.1:78454120-78454139 | MS.gene38106:intron | 40.0% | |
| TTAGTTACTAAAGGGGAGAC+TGG | + | chr5.1:78455111-78455130 | MS.gene38106:CDS | 40.0% | |
| TTCAATAAAACCTTGTCCGG+TGG | - | chr5.1:78451751-78451770 | None:intergenic | 40.0% | |
| TTCTACATCTACACTCACCA+TGG | - | chr5.1:78453780-78453799 | None:intergenic | 40.0% | |
| TTTCAAATCGAAACACCGCA+TGG | + | chr5.1:78453880-78453899 | MS.gene38106:intron | 40.0% | |
| TTTCACCTGGATCTGTCAAT+TGG | + | chr5.1:78453391-78453410 | MS.gene38106:CDS | 40.0% | |
| ! | AAAGATGCCATTTCGGAAAG+TGG | + | chr5.1:78453437-78453456 | MS.gene38106:CDS | 40.0% |
| ! | CGCAGTTCTGACAAATGAAA+AGG | - | chr5.1:78451664-78451683 | None:intergenic | 40.0% |
| ! | GCTGGTAACGATATTGTTCA+AGG | + | chr5.1:78453519-78453538 | MS.gene38106:CDS | 40.0% |
| ! | GGAGAGAAAGGTATAGGATA+GGG | - | chr5.1:78454323-78454342 | None:intergenic | 40.0% |
| ! | TTCCATTTTCCTGTTACCTG+AGG | + | chr5.1:78455335-78455354 | MS.gene38106:CDS | 40.0% |
| ! | TTTCTTTTTGCAGGATGGAG+AGG | + | chr5.1:78452423-78452442 | MS.gene38106:intron | 40.0% |
| ! | TTTTGTGAAGCCTTAAGGCA+GGG | - | chr5.1:78454281-78454300 | None:intergenic | 40.0% |
| ! | TTTTTGTGAAGCCTTAAGGC+AGG | - | chr5.1:78454282-78454301 | None:intergenic | 40.0% |
| !! | AACATGGTTCTAAATTGCGC+GGG | + | chr5.1:78452380-78452399 | MS.gene38106:intron | 40.0% |
| !! | ACATAATGGGTCACCCTTAT+TGG | + | chr5.1:78452963-78452982 | MS.gene38106:intron | 40.0% |
| !! | CAACATGGTTCTAAATTGCG+CGG | + | chr5.1:78452379-78452398 | MS.gene38106:intron | 40.0% |
| !! | GTTTTCGAGGATGTCAGAAA+TGG | + | chr5.1:78453236-78453255 | MS.gene38106:CDS | 40.0% |
| AAAAGAGCTCACCCTAAGGA+AGG | - | chr5.1:78450145-78450164 | None:intergenic | 45.0% | |
| AACTTGAGATCACACTCCCA+AGG | + | chr5.1:78454545-78454564 | MS.gene38106:CDS | 45.0% | |
| AGACTCTGGATCAACAGTCT+TGG | + | chr5.1:78453191-78453210 | MS.gene38106:CDS | 45.0% | |
| AGATAACGCATGGGAAACAG+GGG | - | chr5.1:78454431-78454450 | None:intergenic | 45.0% | |
| AGCCGGAAGAACATCTGAAA+TGG | + | chr5.1:78454622-78454641 | MS.gene38106:CDS | 45.0% | |
| AGCTGCCACAAAAAAGCTGT+TGG | - | chr5.1:78454494-78454513 | None:intergenic | 45.0% | |
| AGGAATGAAAACCACACCCT+TGG | + | chr5.1:78451159-78451178 | MS.gene38106:CDS | 45.0% | |
| ATCAGTCATCATCTCAGCGA+AGG | - | chr5.1:78453138-78453157 | None:intergenic | 45.0% | |
| CAAGAACATATCGGGCCTAT+TGG | - | chr5.1:78453689-78453708 | None:intergenic | 45.0% | |
| CAAGAGATACCTCACTCCAA+AGG | + | chr5.1:78452564-78452583 | MS.gene38106:CDS | 45.0% | |
| CACTTATGGTCAAGGCAGAT+GGG | - | chr5.1:78452492-78452511 | None:intergenic | 45.0% | |
| CAGTTCTCCACTTTCCGAAA+TGG | - | chr5.1:78453447-78453466 | None:intergenic | 45.0% | |
| CGAAAAAAGAGCTCACCCTA+AGG | - | chr5.1:78450149-78450168 | None:intergenic | 45.0% | |
| CGATTATGTCCTCAGGTAAC+AGG | - | chr5.1:78455347-78455366 | None:intergenic | 45.0% | |
| CGCTGATCATTTACCAAAGC+AGG | - | chr5.1:78450976-78450995 | None:intergenic | 45.0% | |
| CTAAAGATGGAGTCCTGCTT+TGG | + | chr5.1:78450960-78450979 | MS.gene38106:CDS | 45.0% | |
| CTAGATAACGCATGGGAAAC+AGG | - | chr5.1:78454433-78454452 | None:intergenic | 45.0% | |
| CTCCTATGCTAGATAACGCA+TGG | - | chr5.1:78454441-78454460 | None:intergenic | 45.0% | |
| CTGAGGACATAATCGAGGTA+AGG | + | chr5.1:78455352-78455371 | MS.gene38106:intron | 45.0% | |
| CTGTATTAGGCGACTCTTGA+TGG | + | chr5.1:78453975-78453994 | MS.gene38106:intron | 45.0% | |
| CTTACCTCGATTATGTCCTC+AGG | - | chr5.1:78455354-78455373 | None:intergenic | 45.0% | |
| CTTTGCTGAATTGAGGCCAA+GGG | - | chr5.1:78451178-78451197 | None:intergenic | 45.0% | |
| GAAGCTACAGGTGATGTTTC+TGG | - | chr5.1:78455672-78455691 | None:intergenic | 45.0% | |
| GACCCTTCAACTATGTCCTT+TGG | - | chr5.1:78452583-78452602 | None:intergenic | 45.0% | |
| GCGAGCCATTAACACAAAAC+GGG | + | chr5.1:78451119-78451138 | MS.gene38106:CDS | 45.0% | |
| GGAGCTTATCAGTTTACCAC+CGG | + | chr5.1:78451732-78451751 | MS.gene38106:CDS | 45.0% | |
| GGGTGCACAGTGGTTAATAT+TGG | + | chr5.1:78451204-78451223 | MS.gene38106:CDS | 45.0% | |
| GGTACACAGGATATGGTTGA+AGG | + | chr5.1:78451225-78451244 | MS.gene38106:CDS | 45.0% | |
| GTCCTCAGGTAACAGGAAAA+TGG | - | chr5.1:78455340-78455359 | None:intergenic | 45.0% | |
| GTTACCTGAGGACATAATCG+AGG | + | chr5.1:78455347-78455366 | MS.gene38106:CDS | 45.0% | |
| TATCAGTTTACCACCGGACA+AGG | + | chr5.1:78451738-78451757 | MS.gene38106:CDS | 45.0% | |
| TCACTTATGGTCAAGGCAGA+TGG | - | chr5.1:78452493-78452512 | None:intergenic | 45.0% | |
| TCCCATGCGTTATCTAGCAT+AGG | + | chr5.1:78454436-78454455 | MS.gene38106:intron | 45.0% | |
| TCTACAGTTCATCGCACTAG+AGG | - | chr5.1:78452113-78452132 | None:intergenic | 45.0% | |
| TGCTTCCAATTGACAGATCC+AGG | - | chr5.1:78453399-78453418 | None:intergenic | 45.0% | |
| TGGATCTGTCAATTGGAAGC+AGG | + | chr5.1:78453398-78453417 | MS.gene38106:CDS | 45.0% | |
| TGGTGAAGCCGATATGTTTG+CGG | + | chr5.1:78453605-78453624 | MS.gene38106:intron | 45.0% | |
| TGTCGGATCACTTATGGTCA+AGG | - | chr5.1:78452500-78452519 | None:intergenic | 45.0% | |
| ! | ATCTTCTGGTTGACCTGTCA+AGG | - | chr5.1:78455585-78455604 | None:intergenic | 45.0% |
| ! | CAAAGCACCCGCAAACATAT+CGG | - | chr5.1:78453616-78453635 | None:intergenic | 45.0% |
| ! | CTGATGATGCACAGACATCT+CGG | + | chr5.1:78453153-78453172 | MS.gene38106:CDS | 45.0% |
| ! | GGGAGAGAAAGGTATAGGAT+AGG | - | chr5.1:78454324-78454343 | None:intergenic | 45.0% |
| ! | TGATGATGCACAGACATCTC+GGG | + | chr5.1:78453154-78453173 | MS.gene38106:CDS | 45.0% |
| ! | TGGTTTTCATTCCTCTCCCA+TGG | - | chr5.1:78451153-78451172 | None:intergenic | 45.0% |
| !! | CAACTATGTCCTTTGGAGTG+AGG | - | chr5.1:78452576-78452595 | None:intergenic | 45.0% |
| !! | CTAGCATAGGAGTGTCTAAC+AGG | + | chr5.1:78454449-78454468 | MS.gene38106:intron | 45.0% |
| !! | GTTTCGAGTTGGTTTCCATG+CGG | - | chr5.1:78453898-78453917 | None:intergenic | 45.0% |
| !!! | AAGGGGTGTGGGTGTTATTT+TGG | + | chr5.1:78450475-78450494 | MS.gene38106:intron | 45.0% |
| AAACTCCAGTTGACCACCCT+TGG | - | chr5.1:78455093-78455112 | None:intergenic | 50.0% | |
| AAAGAGGACGGGGTAGTTGA+TGG | + | chr5.1:78452930-78452949 | MS.gene38106:intron | 50.0% | |
| AAAGGCTATTGGGTGCACAG+TGG | + | chr5.1:78451194-78451213 | MS.gene38106:CDS | 50.0% | |
| AGGGGAGATGCGGATAATTG+AGG | - | chr5.1:78450344-78450363 | None:intergenic | 50.0% | |
| CAAACTCGAGCTGCAGCAAA+AGG | + | chr5.1:78450758-78450777 | MS.gene38106:CDS | 50.0% | |
| CAGAACAACAGGGGCTCATA+AGG | - | chr5.1:78452183-78452202 | None:intergenic | 50.0% | |
| CCTTGGCCTCAATTCAGCAA+AGG | + | chr5.1:78451176-78451195 | MS.gene38106:CDS | 50.0% | |
| CCTTTGCTGAATTGAGGCCA+AGG | - | chr5.1:78451179-78451198 | None:intergenic | 50.0% | |
| GACAAAATGGCAGGATGTGG+AGG | + | chr5.1:78451711-78451730 | MS.gene38106:intron | 50.0% | |
| GAGGACGGATCTATAGCTGA+TGG | + | chr5.1:78453056-78453075 | MS.gene38106:intron | 50.0% | |
| GGGATCTTAATCCATGGGAG+AGG | + | chr5.1:78451139-78451158 | MS.gene38106:CDS | 50.0% | |
| GGTGAAGCCGATATGTTTGC+GGG | + | chr5.1:78453606-78453625 | MS.gene38106:intron | 50.0% | |
| TCACCTGTAGCTTCAGCAGA+TGG | + | chr5.1:78455678-78455697 | MS.gene38106:CDS | 50.0% | |
| ! | CAATCGGGTCGTGTTGTTGT+GGG | + | chr5.1:78450000-78450019 | MS.gene38106:CDS | 50.0% |
| ! | TCAATCGGGTCGTGTTGTTG+TGG | + | chr5.1:78449999-78450018 | MS.gene38106:CDS | 50.0% |
| AACGCATGGGAAACAGGGGA+AGG | - | chr5.1:78454427-78454446 | None:intergenic | 55.0% | |
| ACGCATGGGAAACAGGGGAA+GGG | - | chr5.1:78454426-78454445 | None:intergenic | 55.0% | |
| ACTCGAGCTGCAGCAAAAGG+TGG | + | chr5.1:78450761-78450780 | MS.gene38106:CDS | 55.0% | |
| CCACAGCGCTCAAAAGCTCA+AGG | - | chr5.1:78455068-78455087 | None:intergenic | 55.0% | |
| CCGCACAGGCAAGGTTGTTA+CGG | + | chr5.1:78454379-78454398 | MS.gene38106:intron | 55.0% | |
| CCGTAACAACCTTGCCTGTG+CGG | - | chr5.1:78454382-78454401 | None:intergenic | 55.0% | |
| CGTAACAACCTTGCCTGTGC+GGG | - | chr5.1:78454381-78454400 | None:intergenic | 55.0% | |
| CTGAATTGAGGCCAAGGGTG+TGG | - | chr5.1:78451173-78451192 | None:intergenic | 55.0% | |
| GCTCGCTCATCTATTGTCCC+AGG | - | chr5.1:78451105-78451124 | None:intergenic | 55.0% | |
| GCTCTTGCTCCAGAAACTGC+AGG | + | chr5.1:78452466-78452485 | MS.gene38106:CDS | 55.0% | |
| TCGCCATCTGCTGAAGCTAC+AGG | - | chr5.1:78455684-78455703 | None:intergenic | 55.0% | |
| TGTGAAGCCTTAAGGCAGGG+AGG | - | chr5.1:78454278-78454297 | None:intergenic | 55.0% | |
| TTGGCAACCTCCCTGCCTTA+AGG | + | chr5.1:78454268-78454287 | MS.gene38106:intron | 55.0% | |
| ! | TTTGAGCGCTGTGGAGCCAA+GGG | + | chr5.1:78455074-78455093 | MS.gene38106:CDS | 55.0% |
| !! | CCTTGAGCTTTTGAGCGCTG+TGG | + | chr5.1:78455065-78455084 | MS.gene38106:CDS | 55.0% |
| !! | TTTTGAGCGCTGTGGAGCCA+AGG | + | chr5.1:78455073-78455092 | MS.gene38106:CDS | 55.0% |
| AGGGGAAGGGGGGAAGAAAC+AGG | - | chr5.1:78454413-78454432 | None:intergenic | 60.0% | |
| CAAAGGGGCAGTGTGCACAG+TGG | + | chr5.1:78454951-78454970 | MS.gene38106:intron | 60.0% | |
| CATGGGAAACAGGGGAAGGG+GGG | - | chr5.1:78454423-78454442 | None:intergenic | 60.0% | |
| CGAGCTGCAGCAAAAGGTGG+CGG | + | chr5.1:78450764-78450783 | MS.gene38106:CDS | 60.0% | |
| CGCATGGGAAACAGGGGAAG+GGG | - | chr5.1:78454425-78454444 | None:intergenic | 60.0% | |
| GCAGATGGGCCTGCAGTTTC+TGG | - | chr5.1:78452478-78452497 | None:intergenic | 60.0% | |
| GCATGGGAAACAGGGGAAGG+GGG | - | chr5.1:78454424-78454443 | None:intergenic | 60.0% | |
| TGGAGCCAAGGGTGGTCAAC+TGG | + | chr5.1:78455085-78455104 | MS.gene38106:CDS | 60.0% | |
| CAACCTTGCCTGTGCGGGCA+AGG | - | chr5.1:78454376-78454395 | None:intergenic | 65.0% | |
| CTTGCCTGTGCGGGCAAGGA+GGG | - | chr5.1:78454372-78454391 | None:intergenic | 65.0% | |
| TGCGGGCAAGGAGGGGGAAA+TGG | - | chr5.1:78454364-78454383 | None:intergenic | 65.0% | |
| TTGCCTGTGCGGGCAAGGAG+GGG | - | chr5.1:78454371-78454390 | None:intergenic | 65.0% | |
| CCTCCTTGCCCGCACAGGCA+AGG | + | chr5.1:78454370-78454389 | MS.gene38106:intron | 70.0% | |
| CCTTGCCTGTGCGGGCAAGG+AGG | - | chr5.1:78454373-78454392 | None:intergenic | 70.0% | |
| TGCCTGTGCGGGCAAGGAGG+GGG | - | chr5.1:78454370-78454389 | None:intergenic | 70.0% | |
| TTCCCCCTCCTTGCCCGCAC+AGG | + | chr5.1:78454365-78454384 | MS.gene38106:intron | 70.0% | |
| ! | GAGCGCTGTGGAGCCAAGGG+TGG | + | chr5.1:78455077-78455096 | MS.gene38106:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 78449773 | 78455782 | 78449773 | ID=MS.gene38106 |
| chr5.1 | mRNA | 78449773 | 78455782 | 78449773 | ID=MS.gene38106.t1;Parent=MS.gene38106 |
| chr5.1 | exon | 78449773 | 78449859 | 78449773 | ID=MS.gene38106.t1.exon1;Parent=MS.gene38106.t1 |
| chr5.1 | CDS | 78449773 | 78449859 | 78449773 | ID=cds.MS.gene38106.t1;Parent=MS.gene38106.t1 |
| chr5.1 | exon | 78449982 | 78450152 | 78449982 | ID=MS.gene38106.t1.exon2;Parent=MS.gene38106.t1 |
| chr5.1 | CDS | 78449982 | 78450152 | 78449982 | ID=cds.MS.gene38106.t1;Parent=MS.gene38106.t1 |
| chr5.1 | exon | 78450743 | 78450981 | 78450743 | ID=MS.gene38106.t1.exon3;Parent=MS.gene38106.t1 |
| chr5.1 | CDS | 78450743 | 78450981 | 78450743 | ID=cds.MS.gene38106.t1;Parent=MS.gene38106.t1 |
| chr5.1 | exon | 78451080 | 78451251 | 78451080 | ID=MS.gene38106.t1.exon4;Parent=MS.gene38106.t1 |
| chr5.1 | CDS | 78451080 | 78451251 | 78451080 | ID=cds.MS.gene38106.t1;Parent=MS.gene38106.t1 |
| chr5.1 | exon | 78451348 | 78451386 | 78451348 | ID=MS.gene38106.t1.exon5;Parent=MS.gene38106.t1 |
| chr5.1 | CDS | 78451348 | 78451386 | 78451348 | ID=cds.MS.gene38106.t1;Parent=MS.gene38106.t1 |
| chr5.1 | exon | 78451533 | 78451601 | 78451533 | ID=MS.gene38106.t1.exon6;Parent=MS.gene38106.t1 |
| chr5.1 | CDS | 78451533 | 78451601 | 78451533 | ID=cds.MS.gene38106.t1;Parent=MS.gene38106.t1 |
| chr5.1 | exon | 78451724 | 78451840 | 78451724 | ID=MS.gene38106.t1.exon7;Parent=MS.gene38106.t1 |
| chr5.1 | CDS | 78451724 | 78451840 | 78451724 | ID=cds.MS.gene38106.t1;Parent=MS.gene38106.t1 |
| chr5.1 | exon | 78452436 | 78452647 | 78452436 | ID=MS.gene38106.t1.exon8;Parent=MS.gene38106.t1 |
| chr5.1 | CDS | 78452436 | 78452647 | 78452436 | ID=cds.MS.gene38106.t1;Parent=MS.gene38106.t1 |
| chr5.1 | exon | 78453103 | 78453258 | 78453103 | ID=MS.gene38106.t1.exon9;Parent=MS.gene38106.t1 |
| chr5.1 | CDS | 78453103 | 78453258 | 78453103 | ID=cds.MS.gene38106.t1;Parent=MS.gene38106.t1 |
| chr5.1 | exon | 78453362 | 78453561 | 78453362 | ID=MS.gene38106.t1.exon10;Parent=MS.gene38106.t1 |
| chr5.1 | CDS | 78453362 | 78453561 | 78453362 | ID=cds.MS.gene38106.t1;Parent=MS.gene38106.t1 |
| chr5.1 | exon | 78454498 | 78454655 | 78454498 | ID=MS.gene38106.t1.exon11;Parent=MS.gene38106.t1 |
| chr5.1 | CDS | 78454498 | 78454655 | 78454498 | ID=cds.MS.gene38106.t1;Parent=MS.gene38106.t1 |
| chr5.1 | exon | 78455036 | 78455132 | 78455036 | ID=MS.gene38106.t1.exon12;Parent=MS.gene38106.t1 |
| chr5.1 | CDS | 78455036 | 78455132 | 78455036 | ID=cds.MS.gene38106.t1;Parent=MS.gene38106.t1 |
| chr5.1 | exon | 78455277 | 78455368 | 78455277 | ID=MS.gene38106.t1.exon13;Parent=MS.gene38106.t1 |
| chr5.1 | CDS | 78455277 | 78455368 | 78455277 | ID=cds.MS.gene38106.t1;Parent=MS.gene38106.t1 |
| chr5.1 | exon | 78455591 | 78455782 | 78455591 | ID=MS.gene38106.t1.exon14;Parent=MS.gene38106.t1 |
| chr5.1 | CDS | 78455591 | 78455782 | 78455591 | ID=cds.MS.gene38106.t1;Parent=MS.gene38106.t1 |
| Gene Sequence |
| Protein sequence |
