Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91965.t1 | XP_003618022.1 | 99.4 | 666 | 3 | 1 | 1 | 665 | 1 | 666 | 0.00E+00 | 1243.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91965.t1 | Q9FKI0 | 76.5 | 656 | 151 | 2 | 1 | 655 | 1 | 654 | 4.6e-288 | 991.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91965.t1 | G7K508 | 99.4 | 666 | 3 | 1 | 1 | 665 | 1 | 666 | 0.0e+00 | 1243.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene91965 | 0.834848 | 2.36E-56 | -1.69E-46 |
| MS.gene049378 | MS.gene91965 | 0.802071 | 6.68E-49 | -1.69E-46 |
| MS.gene049435 | MS.gene91965 | 0.813389 | 2.62E-51 | -1.69E-46 |
| MS.gene049501 | MS.gene91965 | 0.803257 | 3.80E-49 | -1.69E-46 |
| MS.gene049647 | MS.gene91965 | 0.800687 | 1.28E-48 | -1.69E-46 |
| MS.gene050226 | MS.gene91965 | 0.846413 | 2.21E-59 | -1.69E-46 |
| MS.gene050227 | MS.gene91965 | 0.844662 | 6.58E-59 | -1.69E-46 |
| MS.gene050228 | MS.gene91965 | 0.850892 | 1.27E-60 | -1.69E-46 |
| MS.gene050376 | MS.gene91965 | 0.800078 | 1.71E-48 | -1.69E-46 |
| MS.gene050442 | MS.gene91965 | 0.838919 | 2.16E-57 | -1.69E-46 |
| MS.gene050623 | MS.gene91965 | -0.811737 | 6.03E-51 | -1.69E-46 |
| MS.gene050719 | MS.gene91965 | 0.85288 | 3.45E-61 | -1.69E-46 |
| MS.gene050721 | MS.gene91965 | 0.851183 | 1.05E-60 | -1.69E-46 |
| MS.gene050724 | MS.gene91965 | 0.838723 | 2.43E-57 | -1.69E-46 |
| MS.gene050759 | MS.gene91965 | 0.806112 | 9.64E-50 | -1.69E-46 |
| MS.gene050780 | MS.gene91965 | 0.835347 | 1.77E-56 | -1.69E-46 |
| MS.gene050824 | MS.gene91965 | 0.815306 | 9.89E-52 | -1.69E-46 |
| MS.gene051198 | MS.gene91965 | 0.808085 | 3.68E-50 | -1.69E-46 |
| MS.gene051757 | MS.gene91965 | 0.813696 | 2.25E-51 | -1.69E-46 |
| MS.gene052020 | MS.gene91965 | 0.82676 | 2.27E-54 | -1.69E-46 |
| MS.gene052176 | MS.gene91965 | 0.828708 | 7.74E-55 | -1.69E-46 |
| MS.gene052323 | MS.gene91965 | 0.805012 | 1.64E-49 | -1.69E-46 |
| MS.gene052464 | MS.gene91965 | 0.803907 | 2.79E-49 | -1.69E-46 |
| MS.gene052856 | MS.gene91965 | 0.836033 | 1.19E-56 | -1.69E-46 |
| MS.gene052858 | MS.gene91965 | 0.819481 | 1.14E-52 | -1.69E-46 |
| MS.gene052860 | MS.gene91965 | 0.818456 | 1.94E-52 | -1.69E-46 |
| MS.gene052896 | MS.gene91965 | 0.801809 | 7.56E-49 | -1.69E-46 |
| MS.gene053079 | MS.gene91965 | 0.812615 | 3.88E-51 | -1.69E-46 |
| MS.gene05414 | MS.gene91965 | 0.802583 | 5.24E-49 | -1.69E-46 |
| MS.gene05417 | MS.gene91965 | 0.803052 | 4.19E-49 | -1.69E-46 |
| MS.gene05510 | MS.gene91965 | 0.804914 | 1.72E-49 | -1.69E-46 |
| MS.gene055222 | MS.gene91965 | 0.808957 | 2.40E-50 | -1.69E-46 |
| MS.gene055608 | MS.gene91965 | 0.805763 | 1.14E-49 | -1.69E-46 |
| MS.gene055623 | MS.gene91965 | 0.804717 | 1.89E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene91965 | 0.816289 | 5.97E-52 | -1.69E-46 |
| MS.gene056506 | MS.gene91965 | 0.847143 | 1.39E-59 | -1.69E-46 |
| MS.gene056552 | MS.gene91965 | 0.81914 | 1.36E-52 | -1.69E-46 |
| MS.gene057314 | MS.gene91965 | 0.801244 | 9.87E-49 | -1.69E-46 |
| MS.gene057360 | MS.gene91965 | 0.817519 | 3.16E-52 | -1.69E-46 |
| MS.gene05761 | MS.gene91965 | 0.81926 | 1.27E-52 | -1.69E-46 |
| MS.gene057750 | MS.gene91965 | 0.805465 | 1.32E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene91965 | 0.841676 | 4.11E-58 | -1.69E-46 |
| MS.gene057915 | MS.gene91965 | 0.806151 | 9.46E-50 | -1.69E-46 |
| MS.gene058010 | MS.gene91965 | 0.801207 | 1.00E-48 | -1.69E-46 |
| MS.gene058084 | MS.gene91965 | 0.81261 | 3.89E-51 | -1.69E-46 |
| MS.gene058146 | MS.gene91965 | 0.804221 | 2.40E-49 | -1.69E-46 |
| MS.gene059128 | MS.gene91965 | 0.810414 | 1.17E-50 | -1.69E-46 |
| MS.gene059249 | MS.gene91965 | 0.807979 | 3.88E-50 | -1.69E-46 |
| MS.gene059713 | MS.gene91965 | 0.811676 | 6.22E-51 | -1.69E-46 |
| MS.gene059725 | MS.gene91965 | 0.820462 | 6.77E-53 | -1.69E-46 |
| MS.gene060011 | MS.gene91965 | 0.807287 | 5.44E-50 | -1.69E-46 |
| MS.gene060167 | MS.gene91965 | 0.812696 | 3.72E-51 | -1.69E-46 |
| MS.gene060297 | MS.gene91965 | 0.800227 | 1.59E-48 | -1.69E-46 |
| MS.gene060310 | MS.gene91965 | 0.820263 | 7.52E-53 | -1.69E-46 |
| MS.gene060322 | MS.gene91965 | 0.801699 | 7.96E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene91965 | 0.802347 | 5.86E-49 | -1.69E-46 |
| MS.gene060619 | MS.gene91965 | 0.833079 | 6.55E-56 | -1.69E-46 |
| MS.gene060637 | MS.gene91965 | 0.84163 | 4.23E-58 | -1.69E-46 |
| MS.gene060683 | MS.gene91965 | 0.850462 | 1.67E-60 | -1.69E-46 |
| MS.gene060685 | MS.gene91965 | 0.846951 | 1.57E-59 | -1.69E-46 |
| MS.gene060998 | MS.gene91965 | 0.825794 | 3.86E-54 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91965.t1 | MTR_5g098130 | 99.550 | 666 | 2 | 1 | 1 | 665 | 1 | 666 | 0.0 | 1360 |
| MS.gene91965.t1 | MTR_5g098130 | 99.590 | 488 | 1 | 1 | 1 | 487 | 1 | 488 | 0.0 | 1000 |
| MS.gene91965.t1 | MTR_5g098130 | 23.789 | 227 | 153 | 4 | 404 | 616 | 146 | 366 | 1.17e-11 | 68.2 |
| MS.gene91965.t1 | MTR_5g094160 | 69.412 | 680 | 192 | 3 | 1 | 664 | 1 | 680 | 0.0 | 991 |
| MS.gene91965.t1 | MTR_8g011460 | 68.527 | 645 | 201 | 1 | 1 | 643 | 1 | 645 | 0.0 | 923 |
| MS.gene91965.t1 | MTR_7g052820 | 67.319 | 664 | 205 | 4 | 1 | 660 | 1 | 656 | 0.0 | 906 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91965.t1 | AT5G35700 | 79.116 | 656 | 134 | 3 | 1 | 655 | 1 | 654 | 0.0 | 1077 |
| MS.gene91965.t1 | AT2G04750 | 73.414 | 662 | 163 | 4 | 1 | 660 | 1 | 651 | 0.0 | 999 |
| MS.gene91965.t1 | AT4G26700 | 68.685 | 677 | 194 | 4 | 1 | 660 | 1 | 676 | 0.0 | 954 |
| MS.gene91965.t1 | AT4G26700 | 68.685 | 677 | 194 | 4 | 1 | 660 | 1 | 676 | 0.0 | 954 |
| MS.gene91965.t1 | AT4G26700 | 68.685 | 677 | 194 | 4 | 1 | 660 | 1 | 676 | 0.0 | 954 |
| MS.gene91965.t1 | AT5G55400 | 66.958 | 687 | 194 | 7 | 1 | 657 | 1 | 684 | 0.0 | 943 |
| MS.gene91965.t1 | AT5G55400 | 66.958 | 687 | 194 | 7 | 1 | 657 | 1 | 684 | 0.0 | 943 |
| MS.gene91965.t1 | AT5G55400 | 66.958 | 687 | 194 | 7 | 1 | 657 | 1 | 684 | 0.0 | 943 |
| MS.gene91965.t1 | AT5G48460 | 66.261 | 658 | 215 | 4 | 1 | 655 | 1 | 654 | 0.0 | 898 |
| MS.gene91965.t1 | AT4G26700 | 71.902 | 573 | 158 | 2 | 1 | 571 | 1 | 572 | 0.0 | 860 |
| MS.gene91965.t1 | AT4G26700 | 71.902 | 573 | 158 | 2 | 1 | 571 | 1 | 572 | 0.0 | 860 |
| MS.gene91965.t1 | AT4G26700 | 71.902 | 573 | 158 | 2 | 1 | 571 | 1 | 572 | 0.0 | 860 |
| MS.gene91965.t1 | AT4G26700 | 71.961 | 510 | 127 | 3 | 166 | 660 | 19 | 527 | 0.0 | 754 |
| MS.gene91965.t1 | AT4G26700 | 24.336 | 226 | 153 | 5 | 145 | 365 | 256 | 468 | 2.31e-11 | 67.4 |
Find 129 sgRNAs with CRISPR-Local
Find 389 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCCTTCAATTTCTTGAAAA+TGG | 0.097004 | 5.2:-82559167 | None:intergenic |
| GCAGATGGGCCTGCAGTTTC+TGG | 0.145741 | 5.2:-82561597 | None:intergenic |
| TGTTTATTTGTAGCCTTATT+TGG | 0.199374 | 5.2:+82560455 | MS.gene91965:intron |
| CTTATTAATGTTGCTGTTCC+TGG | 0.208314 | 5.2:+82560204 | MS.gene91965:CDS |
| GAAGAAAACTCCTCAACTTT+TGG | 0.232213 | 5.2:+82560679 | MS.gene91965:CDS |
| GTGCAACAAATGCAAGATTA+AGG | 0.241539 | 5.2:-82561731 | None:intergenic |
| GAAGCTACAGGTGAGGTTTC+TGG | 0.258179 | 5.2:-82564800 | None:intergenic |
| TCTTTCTGTCGGATCACTTA+TGG | 0.263323 | 5.2:-82561625 | None:intergenic |
| TTCCGAAATGGCATCTTTAT+AGG | 0.267092 | 5.2:-82562557 | None:intergenic |
| CTGATGCTGATATACTAAAC+TGG | 0.292071 | 5.2:+82563704 | MS.gene91965:CDS |
| TAATATTGGTACACAGGATA+TGG | 0.301639 | 5.2:+82560338 | MS.gene91965:CDS |
| CTCCATTTCAGATGTTCTTC+CGG | 0.303748 | 5.2:-82563749 | None:intergenic |
| CTCAATTCAGCAAAGGCTAT+TGG | 0.304700 | 5.2:+82560303 | MS.gene91965:CDS |
| GTGTTCTTGTTTCTGATCAA+TGG | 0.308745 | 5.2:+82558922 | MS.gene91965:CDS |
| GTCCTCAGGTAACAGGAAAA+TGG | 0.310800 | 5.2:-82564468 | None:intergenic |
| ATCAGACCAAGTACCAAATA+AGG | 0.331284 | 5.2:-82560468 | None:intergenic |
| CAGTTCTCCACTTTCCGAAA+TGG | 0.351333 | 5.2:-82562569 | None:intergenic |
| CTCCTATAAAGATGCCATTT+CGG | 0.357411 | 5.2:+82562555 | MS.gene91965:CDS |
| TTGTAGCCTTATTTGGTACT+TGG | 0.358094 | 5.2:+82560462 | MS.gene91965:intron |
| CGATTATGTCCTCAGGTAAC+AGG | 0.359547 | 5.2:-82564475 | None:intergenic |
| TCAATTCAGCAAAGGCTATT+GGG | 0.370233 | 5.2:+82560304 | MS.gene91965:CDS |
| GGAATTAGTGGAAGATGATA+AGG | 0.375109 | 5.2:+82560700 | MS.gene91965:CDS |
| ATAAAGTGAGTATCATCTTC+TGG | 0.378823 | 5.2:-82564727 | None:intergenic |
| ATTATCATCAATAGCTAAAT+CGG | 0.379443 | 5.2:-82564864 | None:intergenic |
| CGCACACATTAACAGTTACT+TGG | 0.389361 | 5.2:+82559991 | MS.gene91965:CDS |
| GGAAGAGTCGTATCAGAATA+TGG | 0.390337 | 5.2:+82559231 | MS.gene91965:CDS |
| ATCAGTGTTGCCAGAAAACT+TGG | 0.390508 | 5.2:+82564440 | MS.gene91965:CDS |
| GCCTTCAATTTCTTGAAAAT+GGG | 0.394045 | 5.2:-82559166 | None:intergenic |
| GACCCTTCAACTATGTCCTT+TGG | 0.396033 | 5.2:-82561702 | None:intergenic |
| GGGTGCACAGTGGTTAATAT+TGG | 0.401432 | 5.2:+82560324 | MS.gene91965:CDS |
| CTAAAGATGGAGTCCTGCTT+TGG | 0.403603 | 5.2:+82560080 | MS.gene91965:CDS |
| TGGAGCCAAGGGTGGTCAAC+TGG | 0.404329 | 5.2:+82564216 | MS.gene91965:CDS |
| GCATTTGTAGACGGATCAAT+TGG | 0.408423 | 5.2:-82560043 | None:intergenic |
| CGCTGATCATTTACCAAAGC+AGG | 0.410747 | 5.2:-82560093 | None:intergenic |
| TCCGACAGAAAGAGCAAATA+TGG | 0.413008 | 5.2:+82561635 | MS.gene91965:CDS |
| TTTCACCTGGATCTGTCAAT+TGG | 0.414508 | 5.2:+82562516 | MS.gene91965:CDS |
| ACTGGAGTTTAGTTACTAAA+GGG | 0.417956 | 5.2:+82564234 | MS.gene91965:CDS |
| ATCAGTAATCTCTTTACCTT+GGG | 0.422621 | 5.2:-82563686 | None:intergenic |
| AAGAAAGATGCTTCAGACTC+TGG | 0.423959 | 5.2:+82562302 | MS.gene91965:CDS |
| GGGAATAAGAAGCTCTTACT+AGG | 0.424845 | 5.2:+82562665 | MS.gene91965:CDS |
| CATTTCAATAAAACCTTGTC+CGG | 0.427856 | 5.2:-82560871 | None:intergenic |
| TCTATTAGAAGTTCTTGATA+AGG | 0.431418 | 5.2:+82562493 | MS.gene91965:CDS |
| TGTATCTGAAAGAACTCAAT+CGG | 0.434854 | 5.2:+82559117 | MS.gene91965:CDS |
| TTAATTCGACTTGAGTGAAC+TGG | 0.435059 | 5.2:-82558953 | None:intergenic |
| GGATGAGATTAAGGCTGTAT+TGG | 0.438071 | 5.2:+82559210 | MS.gene91965:CDS |
| AGCCGGAAGAACATCTGAAA+TGG | 0.438304 | 5.2:+82563747 | MS.gene91965:CDS |
| AACTGGAGTTTAGTTACTAA+AGG | 0.442884 | 5.2:+82564233 | MS.gene91965:CDS |
| CATTTACTAAGGAAAAGTTT+AGG | 0.445102 | 5.2:-82562619 | None:intergenic |
| AAAAGTAACCATACCTATGC+TGG | 0.448298 | 5.2:-82561761 | None:intergenic |
| CAAACTCGAGCTGCAGCAAA+AGG | 0.449356 | 5.2:+82559881 | MS.gene91965:CDS |
| CATAACCAGCTTTCTTCAAG+TGG | 0.460935 | 5.2:-82560903 | None:intergenic |
| TTGTTTGATCTTGCTAAAGA+TGG | 0.461184 | 5.2:+82560067 | MS.gene91965:CDS |
| CATCAGTAATCTCTTTACCT+TGG | 0.462922 | 5.2:-82563687 | None:intergenic |
| AGCGAGCCATTAACACAAAA+CGG | 0.464056 | 5.2:+82560238 | MS.gene91965:CDS |
| AGCAAATATGGTTCTTGAGC+AGG | 0.464906 | 5.2:+82561647 | MS.gene91965:CDS |
| TTATTAATGTTGCTGTTCCT+GGG | 0.467543 | 5.2:+82560205 | MS.gene91965:CDS |
| TGCTTCCAATTGACAGATCC+AGG | 0.469124 | 5.2:-82562521 | None:intergenic |
| GTTACCAGCAACATTTACTA+AGG | 0.474649 | 5.2:-82562630 | None:intergenic |
| CTGAATTGAGGCCAAGGGTG+TGG | 0.475848 | 5.2:-82560290 | None:intergenic |
| AATTTCCACTTGAAGAAAGC+TGG | 0.477622 | 5.2:+82560898 | MS.gene91965:CDS |
| ACCATATTTGCTCTTTCTGT+CGG | 0.484244 | 5.2:-82561636 | None:intergenic |
| AAATTTCTCATCTGATGTAA+AGG | 0.484697 | 5.2:+82560939 | MS.gene91965:CDS |
| TCACTTATGGTCAAGGCAGA+TGG | 0.486966 | 5.2:-82561612 | None:intergenic |
| ACAAATGCAAGATTAAGGTT+AGG | 0.489655 | 5.2:-82561726 | None:intergenic |
| AAACTCCAGTTGACCACCCT+TGG | 0.493668 | 5.2:-82564221 | None:intergenic |
| AAAGATGCCATTTCGGAAAG+TGG | 0.495109 | 5.2:+82562562 | MS.gene91965:CDS |
| CAATAGCCTTTGCTGAATTG+AGG | 0.498086 | 5.2:-82560302 | None:intergenic |
| TCTGATTTCACAAATAATCA+AGG | 0.499124 | 5.2:+82560485 | MS.gene91965:CDS |
| TTCAATTTCTTGAAAATGGG+AGG | 0.499738 | 5.2:-82559163 | None:intergenic |
| GCTGGTAACGATATTGTTCA+AGG | 0.500025 | 5.2:+82562644 | MS.gene91965:CDS |
| TCACCATCTGCTGAAGCTAC+AGG | 0.500353 | 5.2:-82564812 | None:intergenic |
| TCAATCGGGTCGTGTTATTG+TGG | 0.502016 | 5.2:+82559132 | MS.gene91965:CDS |
| AGACTCTGGATCAACAGTCT+TGG | 0.504040 | 5.2:+82562316 | MS.gene91965:CDS |
| CAATCGGGTCGTGTTATTGT+GGG | 0.504888 | 5.2:+82559133 | MS.gene91965:CDS |
| ACTCCAAAGGACATAGTTGA+AGG | 0.507026 | 5.2:+82561699 | MS.gene91965:CDS |
| CACTTATGGTCAAGGCAGAT+GGG | 0.511464 | 5.2:-82561611 | None:intergenic |
| ATCTGAAATGGAGAGTTTCA+AGG | 0.513085 | 5.2:+82563759 | MS.gene91965:CDS |
| CGAAATGGCATCTTTATAGG+AGG | 0.519018 | 5.2:-82562554 | None:intergenic |
| TTAGTTACTAAAGGGGAGAC+TGG | 0.520211 | 5.2:+82564242 | MS.gene91965:CDS |
| GCGAGCCATTAACACAAAAC+GGG | 0.525388 | 5.2:+82560239 | MS.gene91965:CDS |
| GTTCTTGATAAGGTTTCACC+TGG | 0.533370 | 5.2:+82562503 | MS.gene91965:CDS |
| GACAAAATGGCAGGATGTGG+AGG | 0.537970 | 5.2:+82560831 | MS.gene91965:intron |
| TCCACTAATTCCAAAAGTTG+AGG | 0.538135 | 5.2:-82560689 | None:intergenic |
| TTTGAGCGCTGTGGAGCCAA+GGG | 0.539077 | 5.2:+82564205 | MS.gene91965:CDS |
| CTGATGATGCACAGACATCT+CGG | 0.539124 | 5.2:+82562278 | MS.gene91965:CDS |
| TATCTGCTAGCATCATGTAC+TGG | 0.540376 | 5.2:+82564747 | MS.gene91965:CDS |
| GGTACACAGGATATGGTTGA+AGG | 0.543260 | 5.2:+82560345 | MS.gene91965:CDS |
| CTCAAGGAAGAAAATTCCGT+TGG | 0.548350 | 5.2:-82564180 | None:intergenic |
| TGGATCTGTCAATTGGAAGC+AGG | 0.548732 | 5.2:+82562523 | MS.gene91965:CDS |
| CAAAACGGGATCTTAATCCA+TGG | 0.551814 | 5.2:+82560253 | MS.gene91965:CDS |
| TGATGATGCACAGACATCTC+GGG | 0.552373 | 5.2:+82562279 | MS.gene91965:CDS |
| CTTACCTCGATTATGTCCTC+AGG | 0.553465 | 5.2:-82564482 | None:intergenic |
| TGCAATTAATGAATCTGAGA+AGG | 0.554719 | 5.2:+82559958 | MS.gene91965:CDS |
| GCTCTTGCTCCAGAAACTGC+AGG | 0.556106 | 5.2:+82561588 | MS.gene91965:CDS |
| CAACTATGTCCTTTGGAGTG+AGG | 0.559053 | 5.2:-82561695 | None:intergenic |
| GCTCGCTCATCTATTGTCCC+AGG | 0.564121 | 5.2:-82560222 | None:intergenic |
| CCACAGCGCTCAAAAGCTCA+AGG | 0.565969 | 5.2:-82564196 | None:intergenic |
| TCACCTGTAGCTTCAGCAGA+TGG | 0.567018 | 5.2:+82564809 | MS.gene91965:CDS |
| TGTCGGATCACTTATGGTCA+AGG | 0.567674 | 5.2:-82561619 | None:intergenic |
| TTCAATAAAACCTTGTCCGG+TGG | 0.569867 | 5.2:-82560868 | None:intergenic |
| TATCAGTTTACCACCGGACA+AGG | 0.571953 | 5.2:+82560858 | MS.gene91965:CDS |
| AATAACAAAGTGAAGAAAGC+CGG | 0.571985 | 5.2:+82563730 | MS.gene91965:CDS |
| GAGCGCTGTGGAGCCAAGGG+TGG | 0.578582 | 5.2:+82564208 | MS.gene91965:CDS |
| CCTTTGCTGAATTGAGGCCA+AGG | 0.582536 | 5.2:-82560296 | None:intergenic |
| ACTGCCAGCTTAAGGAGAGT+TGG | 0.583296 | 5.2:-82564900 | None:intergenic |
| ATCAGTCATCATCTCAGCGA+AGG | 0.585154 | 5.2:-82562260 | None:intergenic |
| CAGGATAAGAATCTTTCCAA+CGG | 0.585427 | 5.2:+82564164 | MS.gene91965:intron |
| AGGAATGAAAACCACACCCT+TGG | 0.586456 | 5.2:+82560279 | MS.gene91965:CDS |
| CGAGCTGCAGCAAAAGGTGG+CGG | 0.589232 | 5.2:+82559887 | MS.gene91965:CDS |
| TCAAACAATGCATTTGTAGA+CGG | 0.593212 | 5.2:-82560052 | None:intergenic |
| GGAGCTTATCAGTTTACCAC+CGG | 0.595643 | 5.2:+82560852 | MS.gene91965:CDS |
| GTATCTGAAAGAACTCAATC+GGG | 0.598331 | 5.2:+82559118 | MS.gene91965:CDS |
| TGATGCTGATATACTAAACT+GGG | 0.599993 | 5.2:+82563705 | MS.gene91965:CDS |
| CTGGTAACGATATTGTTCAA+GGG | 0.602831 | 5.2:+82562645 | MS.gene91965:CDS |
| AAAAGAGCTCACCCTAAGGA+AGG | 0.609760 | 5.2:-82559275 | None:intergenic |
| CTTTGCTGAATTGAGGCCAA+GGG | 0.610450 | 5.2:-82560295 | None:intergenic |
| ACTCGAGCTGCAGCAAAAGG+TGG | 0.613169 | 5.2:+82559884 | MS.gene91965:CDS |
| CTGGAGTTTAGTTACTAAAG+GGG | 0.614933 | 5.2:+82564235 | MS.gene91965:CDS |
| GGGATCTTAATCCATGGGAG+AGG | 0.619723 | 5.2:+82560259 | MS.gene91965:CDS |
| AGTGGTTAATATTGGTACAC+AGG | 0.622990 | 5.2:+82560332 | MS.gene91965:CDS |
| AAAACGGGATCTTAATCCAT+GGG | 0.623930 | 5.2:+82560254 | MS.gene91965:CDS |
| TGAAACAGATTTAGTCAATG+AGG | 0.625097 | 5.2:+82564838 | MS.gene91965:CDS |
| ATCTGCTGAAGCTACAGGTG+AGG | 0.633145 | 5.2:-82564807 | None:intergenic |
| CTCCAAAGGACATAGTTGAA+GGG | 0.634932 | 5.2:+82561700 | MS.gene91965:CDS |
| CCTTGGCCTCAATTCAGCAA+AGG | 0.637065 | 5.2:+82560296 | MS.gene91965:CDS |
| CAAGAGATACCTCACTCCAA+AGG | 0.644053 | 5.2:+82561686 | MS.gene91965:CDS |
| AACTTGAGATCACACTCCCA+AGG | 0.664816 | 5.2:+82563670 | MS.gene91965:CDS |
| GTTACCTGAGGACATAATCG+AGG | 0.704443 | 5.2:+82564478 | MS.gene91965:CDS |
| AAAGGCTATTGGGTGCACAG+TGG | 0.746180 | 5.2:+82560314 | MS.gene91965:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATTTATTTTCTTTTTTC+AGG | + | chr5.2:82564145-82564164 | MS.gene91965:intron | 10.0% |
| !!! | TTATACATTAAGAATATTTT+GGG | + | chr5.2:82561821-82561840 | MS.gene91965:intron | 10.0% |
| !!! | TTTATACATTAAGAATATTT+TGG | + | chr5.2:82561820-82561839 | MS.gene91965:intron | 10.0% |
| !! | AACAATCAAAATAAAGAAAT+CGG | - | chr5.2:82562002-82562021 | None:intergenic | 15.0% |
| !! | AATAAATCTAAAAAATGTGT+TGG | - | chr5.2:82564127-82564146 | None:intergenic | 15.0% |
| !! | ATCATGTAAATATATAATAC+TGG | + | chr5.2:82561043-82561062 | MS.gene91965:intron | 15.0% |
| !! | TAAATAAAATGAATCGATAA+GGG | - | chr5.2:82562104-82562123 | None:intergenic | 15.0% |
| !! | TCATGTAAATATATAATACT+GGG | + | chr5.2:82561044-82561063 | MS.gene91965:intron | 15.0% |
| !! | TTATTTGTAAGTAACTTTAT+AGG | + | chr5.2:82559794-82559813 | MS.gene91965:intron | 15.0% |
| !!! | ATTCATAATATAAACTGTTT+TGG | - | chr5.2:82563856-82563875 | None:intergenic | 15.0% |
| !!! | TATACATTAAGAATATTTTG+GGG | + | chr5.2:82561822-82561841 | MS.gene91965:intron | 15.0% |
| !!! | TCATTTTATTTACATTTACT+GGG | + | chr5.2:82562112-82562131 | MS.gene91965:intron | 15.0% |
| !!! | TTCATTTTATTTACATTTAC+TGG | + | chr5.2:82562111-82562130 | MS.gene91965:intron | 15.0% |
| !! | AATAAAGTATGGTATAATCT+AGG | - | chr5.2:82564646-82564665 | None:intergenic | 20.0% |
| !! | AATAGAATTGATCTTATGTT+TGG | - | chr5.2:82560119-82560138 | None:intergenic | 20.0% |
| !! | ATGAAATAACAAGAACATAT+CGG | - | chr5.2:82562823-82562842 | None:intergenic | 20.0% |
| !! | ATGAATAATAGAAATCAGAA+TGG | - | chr5.2:82560568-82560587 | None:intergenic | 20.0% |
| !! | ATTATCATCAATAGCTAAAT+CGG | - | chr5.2:82564867-82564886 | None:intergenic | 20.0% |
| !! | GGTTCAATGAAAAAATTAAA+AGG | - | chr5.2:82562428-82562447 | None:intergenic | 20.0% |
| !! | GTAAATAAAATGAATCGATA+AGG | - | chr5.2:82562105-82562124 | None:intergenic | 20.0% |
| !! | TATACTAAGATATAATGAAC+CGG | - | chr5.2:82561971-82561990 | None:intergenic | 20.0% |
| !! | TATATAATATAACATAGCTC+CGG | + | chr5.2:82561105-82561124 | MS.gene91965:intron | 20.0% |
| !! | TGTTATAAAATCAACTTCAA+TGG | + | chr5.2:82564591-82564610 | MS.gene91965:intron | 20.0% |
| !! | TGTTCATTTGAAAAATAGAA+GGG | + | chr5.2:82559590-82559609 | MS.gene91965:intron | 20.0% |
| !! | TTATGATAAATCAGTATTGT+TGG | + | chr5.2:82562710-82562729 | MS.gene91965:intron | 20.0% |
| !! | TTCTGATTTCTATTATTCAT+TGG | + | chr5.2:82560568-82560587 | MS.gene91965:intron | 20.0% |
| !!! | AAAAAGTTCTTCATTTTTGA+AGG | + | chr5.2:82559913-82559932 | MS.gene91965:CDS | 20.0% |
| !!! | AACTAATTTTGTTAAAGCTT+TGG | + | chr5.2:82564030-82564049 | MS.gene91965:intron | 20.0% |
| !!! | ACTGAGAAATTTTATTTTTG+TGG | + | chr5.2:82564668-82564687 | MS.gene91965:intron | 20.0% |
| !!! | CAAAAGTATACTTTCAAATT+AGG | - | chr5.2:82559734-82559753 | None:intergenic | 20.0% |
| !!! | CATTAAATTTTGAAACTGAT+GGG | + | chr5.2:82563292-82563311 | MS.gene91965:intron | 20.0% |
| !!! | CTCCTCTAATTTTTTTTTAT+TGG | + | chr5.2:82561904-82561923 | MS.gene91965:intron | 20.0% |
| ! | AAATTTCTCATCTGATGTAA+AGG | + | chr5.2:82560939-82560958 | MS.gene91965:CDS | 25.0% |
| ! | ACTGTTCAATGTTTAACAAA+GGG | + | chr5.2:82564066-82564085 | MS.gene91965:intron | 25.0% |
| ! | ATCTATAATGTTACAGAAGA+AGG | - | chr5.2:82563218-82563237 | None:intergenic | 25.0% |
| ! | ATGAAAAGGAAAGAATATCA+CGG | - | chr5.2:82560770-82560789 | None:intergenic | 25.0% |
| ! | ATTTAGTAAATCAGAACAAC+AGG | - | chr5.2:82561314-82561333 | None:intergenic | 25.0% |
| ! | CAATGATCAAGAAATCAAAA+TGG | - | chr5.2:82559039-82559058 | None:intergenic | 25.0% |
| ! | CATGTATGCATAATATCTTA+AGG | + | chr5.2:82563825-82563844 | MS.gene91965:intron | 25.0% |
| ! | CATTTACTAAGGAAAAGTTT+AGG | - | chr5.2:82562622-82562641 | None:intergenic | 25.0% |
| ! | CTATAACTAAGAACAAAAAG+AGG | - | chr5.2:82563148-82563167 | None:intergenic | 25.0% |
| ! | CTCTATTATATAGAAACAGA+GGG | + | chr5.2:82559495-82559514 | MS.gene91965:intron | 25.0% |
| ! | CTTCATATGTTATGACAAAA+TGG | + | chr5.2:82560818-82560837 | MS.gene91965:intron | 25.0% |
| ! | GAAATATTATAACCGAAGAA+TGG | + | chr5.2:82563320-82563339 | MS.gene91965:intron | 25.0% |
| ! | GCAACCAAGTTATAAAAATT+GGG | + | chr5.2:82562591-82562610 | MS.gene91965:CDS | 25.0% |
| ! | GCATTTGCATATATCATATT+TGG | + | chr5.2:82563913-82563932 | MS.gene91965:intron | 25.0% |
| ! | GGCCAATAAAAAAAAATTAG+AGG | - | chr5.2:82561909-82561928 | None:intergenic | 25.0% |
| ! | GTGTTCATTTGAAAAATAGA+AGG | + | chr5.2:82559589-82559608 | MS.gene91965:intron | 25.0% |
| ! | GTTAAAAAAACTGTCTTTCT+AGG | + | chr5.2:82563173-82563192 | MS.gene91965:intron | 25.0% |
| ! | GTTCATTTGAAAAATAGAAG+GGG | + | chr5.2:82559591-82559610 | MS.gene91965:intron | 25.0% |
| ! | GTTTCATTTAAGCAAAACTA+AGG | + | chr5.2:82559527-82559546 | MS.gene91965:intron | 25.0% |
| ! | TAGAAGAAATAGTACGATAA+TGG | + | chr5.2:82559357-82559376 | MS.gene91965:intron | 25.0% |
| ! | TATAACTGAAGATAACCAAT+AGG | + | chr5.2:82562796-82562815 | MS.gene91965:intron | 25.0% |
| ! | TCCAAAAAAAGATACTCAAA+AGG | - | chr5.2:82561930-82561949 | None:intergenic | 25.0% |
| ! | TCTATTAGAAGTTCTTGATA+AGG | + | chr5.2:82562493-82562512 | MS.gene91965:CDS | 25.0% |
| ! | TCTGATTTCACAAATAATCA+AGG | + | chr5.2:82560485-82560504 | MS.gene91965:CDS | 25.0% |
| ! | TCTTCTGTAACATTATAGAT+GGG | + | chr5.2:82563218-82563237 | MS.gene91965:intron | 25.0% |
| ! | TGAAATAACAAGAACATATC+GGG | - | chr5.2:82562822-82562841 | None:intergenic | 25.0% |
| ! | TGCAACCAAGTTATAAAAAT+TGG | + | chr5.2:82562590-82562609 | MS.gene91965:CDS | 25.0% |
| ! | TTCTTCTGTAACATTATAGA+TGG | + | chr5.2:82563217-82563236 | MS.gene91965:intron | 25.0% |
| ! | TTTAAGTCTGTCAAAATTCA+GGG | - | chr5.2:82560408-82560427 | None:intergenic | 25.0% |
| ! | TTTAGTAAATCAGAACAACA+GGG | - | chr5.2:82561313-82561332 | None:intergenic | 25.0% |
| !! | ATTGAATACTTTCTTTTTGC+AGG | + | chr5.2:82561536-82561555 | MS.gene91965:intron | 25.0% |
| !! | ATTTTGCATTTAATCTTGAC+AGG | + | chr5.2:82564700-82564719 | MS.gene91965:intron | 25.0% |
| !! | CCTTTTCCCAATAAAAAAAA+AGG | - | chr5.2:82561880-82561899 | None:intergenic | 25.0% |
| !! | TATATTAGACCTTATTTCCA+TGG | + | chr5.2:82562885-82562904 | MS.gene91965:intron | 25.0% |
| !! | TTATGTCAATAATGTTTTCG+AGG | + | chr5.2:82562348-82562367 | MS.gene91965:CDS | 25.0% |
| !! | TTTTGTCATAACATATGAAG+AGG | - | chr5.2:82560818-82560837 | None:intergenic | 25.0% |
| !!! | AAAGCTTTGGAATAAAGAAA+AGG | + | chr5.2:82564043-82564062 | MS.gene91965:intron | 25.0% |
| !!! | AGTATCTTTTTTTGGATGAA+GGG | + | chr5.2:82561934-82561953 | MS.gene91965:intron | 25.0% |
| !!! | CCTTTGCCTTTTTTTTTATT+GGG | + | chr5.2:82561871-82561890 | MS.gene91965:intron | 25.0% |
| !!! | CCTTTTTTTTTATTGGGAAA+AGG | + | chr5.2:82561877-82561896 | MS.gene91965:intron | 25.0% |
| !!! | CTCTGTTTCTATATAATAGA+GGG | - | chr5.2:82559496-82559515 | None:intergenic | 25.0% |
| !!! | GCATTAAATTTTGAAACTGA+TGG | + | chr5.2:82563291-82563310 | MS.gene91965:intron | 25.0% |
| !!! | GTCATATGCTATTTTGATTT+AGG | + | chr5.2:82559426-82559445 | MS.gene91965:intron | 25.0% |
| !!! | TCCTTTGCCTTTTTTTTTAT+TGG | + | chr5.2:82561870-82561889 | MS.gene91965:intron | 25.0% |
| !!! | TCTGTTTCTATATAATAGAG+GGG | - | chr5.2:82559495-82559514 | None:intergenic | 25.0% |
| !!! | TGTTCTTGTTATTTCATACA+AGG | + | chr5.2:82562826-82562845 | MS.gene91965:intron | 25.0% |
| !!! | TGTTTATTTGTAGCCTTATT+TGG | + | chr5.2:82560455-82560474 | MS.gene91965:intron | 25.0% |
| !!! | TTATTTCCTTTTTCACAGAT+GGG | + | chr5.2:82562469-82562488 | MS.gene91965:intron | 25.0% |
| AACTGGAGTTTAGTTACTAA+AGG | + | chr5.2:82564233-82564252 | MS.gene91965:CDS | 30.0% | |
| AATAACAAAGTGAAGAAAGC+CGG | + | chr5.2:82563730-82563749 | MS.gene91965:CDS | 30.0% | |
| AATATCAGTATACTCAGAAC+TGG | - | chr5.2:82563803-82563822 | None:intergenic | 30.0% | |
| ACAAATGCAAGATTAAGGTT+AGG | - | chr5.2:82561729-82561748 | None:intergenic | 30.0% | |
| ACGGTTAAAAACGATGATAA+AGG | - | chr5.2:82563470-82563489 | None:intergenic | 30.0% | |
| ACTAAGAACAAAAAGAGGAA+AGG | - | chr5.2:82563143-82563162 | None:intergenic | 30.0% | |
| ACTGGAGTTTAGTTACTAAA+GGG | + | chr5.2:82564234-82564253 | MS.gene91965:CDS | 30.0% | |
| AGATGTAAACAGATACAACA+TGG | + | chr5.2:82561484-82561503 | MS.gene91965:intron | 30.0% | |
| AGCCTTCAATTTCTTGAAAA+TGG | - | chr5.2:82559170-82559189 | None:intergenic | 30.0% | |
| ATAAAGTGAGTATCATCTTC+TGG | - | chr5.2:82564730-82564749 | None:intergenic | 30.0% | |
| ATATGTTATGACAAAATGGC+AGG | + | chr5.2:82560822-82560841 | MS.gene91965:intron | 30.0% | |
| ATCAGTAATCTCTTTACCTT+GGG | - | chr5.2:82563689-82563708 | None:intergenic | 30.0% | |
| ATGAGAAGTTACTGAAAAGT+AGG | + | chr5.2:82563067-82563086 | MS.gene91965:intron | 30.0% | |
| ATGGCATACATATCACATAA+TGG | + | chr5.2:82562074-82562093 | MS.gene91965:intron | 30.0% | |
| ATGTCAATAAATAAGCTACC+AGG | - | chr5.2:82559836-82559855 | None:intergenic | 30.0% | |
| ATTTAAGCAAAACTAAGGTG+AGG | + | chr5.2:82559532-82559551 | MS.gene91965:intron | 30.0% | |
| ATTTATTGACATTGAGTGGT+AGG | + | chr5.2:82559844-82559863 | MS.gene91965:intron | 30.0% | |
| CATCTGTGAAAAAGGAAATA+AGG | - | chr5.2:82562470-82562489 | None:intergenic | 30.0% | |
| CATTTCAATAAAACCTTGTC+CGG | - | chr5.2:82560874-82560893 | None:intergenic | 30.0% | |
| CCAAGTTATAAAAATTGGGA+AGG | + | chr5.2:82562595-82562614 | MS.gene91965:CDS | 30.0% | |
| CCCAATAAAAAAAAAGGCAA+AGG | - | chr5.2:82561874-82561893 | None:intergenic | 30.0% | |
| CCTCTATTATATAGAAACAG+AGG | + | chr5.2:82559494-82559513 | MS.gene91965:intron | 30.0% | |
| CGGTTAAAAACGATGATAAA+GGG | - | chr5.2:82563469-82563488 | None:intergenic | 30.0% | |
| CTGTTCAATGTTTAACAAAG+GGG | + | chr5.2:82564067-82564086 | MS.gene91965:intron | 30.0% | |
| GACTGTTCAATGTTTAACAA+AGG | + | chr5.2:82564065-82564084 | MS.gene91965:intron | 30.0% | |
| GCCTTCAATTTCTTGAAAAT+GGG | - | chr5.2:82559169-82559188 | None:intergenic | 30.0% | |
| GCTTATTTATTGACATTGAG+TGG | + | chr5.2:82559840-82559859 | MS.gene91965:intron | 30.0% | |
| GTATGCATAATATCTTAAGG+CGG | + | chr5.2:82563828-82563847 | MS.gene91965:intron | 30.0% | |
| GTTTAAGTCTGTCAAAATTC+AGG | - | chr5.2:82560409-82560428 | None:intergenic | 30.0% | |
| TAATATTGGTACACAGGATA+TGG | + | chr5.2:82560338-82560357 | MS.gene91965:CDS | 30.0% | |
| TAGACTAGAACTTTCTCTTT+CGG | + | chr5.2:82562027-82562046 | MS.gene91965:intron | 30.0% | |
| TAGAGTTAGGAAATGTATAG+AGG | + | chr5.2:82562162-82562181 | MS.gene91965:intron | 30.0% | |
| TCAAACAATGCATTTGTAGA+CGG | - | chr5.2:82560055-82560074 | None:intergenic | 30.0% | |
| TCATCTTATGCAAGTGAAAA+TGG | - | chr5.2:82560528-82560547 | None:intergenic | 30.0% | |
| TCCATGAAAAATCAACTTCA+TGG | + | chr5.2:82564549-82564568 | MS.gene91965:intron | 30.0% | |
| TGAAACAGATTTAGTCAATG+AGG | + | chr5.2:82564838-82564857 | MS.gene91965:CDS | 30.0% | |
| TGAACTGTAGAATGAAATTG+AGG | + | chr5.2:82561242-82561261 | MS.gene91965:intron | 30.0% | |
| TGATGCTGATATACTAAACT+GGG | + | chr5.2:82563705-82563724 | MS.gene91965:CDS | 30.0% | |
| TGATTTCTTGATCATTGATG+AGG | + | chr5.2:82559042-82559061 | MS.gene91965:intron | 30.0% | |
| TGCAATTAATGAATCTGAGA+AGG | + | chr5.2:82559958-82559977 | MS.gene91965:CDS | 30.0% | |
| TGGAAAGACTTCTTAACTTA+TGG | + | chr5.2:82560588-82560607 | MS.gene91965:intron | 30.0% | |
| TGGCATACATATCACATAAT+GGG | + | chr5.2:82562075-82562094 | MS.gene91965:intron | 30.0% | |
| TGTATCTGAAAGAACTCAAT+CGG | + | chr5.2:82559117-82559136 | MS.gene91965:CDS | 30.0% | |
| TTAAGTCTGTCAAAATTCAG+GGG | - | chr5.2:82560407-82560426 | None:intergenic | 30.0% | |
| TTAGTAAATCAGAACAACAG+GGG | - | chr5.2:82561312-82561331 | None:intergenic | 30.0% | |
| TTCAATTTCTTGAAAATGGG+AGG | - | chr5.2:82559166-82559185 | None:intergenic | 30.0% | |
| TTGTTTGATCTTGCTAAAGA+TGG | + | chr5.2:82560067-82560086 | MS.gene91965:CDS | 30.0% | |
| TTTAAGCAAAACTAAGGTGA+GGG | + | chr5.2:82559533-82559552 | MS.gene91965:intron | 30.0% | |
| TTTCTCAGTGCAATAAAGTA+TGG | - | chr5.2:82564657-82564676 | None:intergenic | 30.0% | |
| TTTCTCTTTCGGAAAAAAAG+AGG | + | chr5.2:82562038-82562057 | MS.gene91965:intron | 30.0% | |
| TTTGATTCAAATGTCTGTGT+GGG | + | chr5.2:82559757-82559776 | MS.gene91965:intron | 30.0% | |
| ! | AAATTAAAAGGCAGAAGTAC+AGG | - | chr5.2:82562416-82562435 | None:intergenic | 30.0% |
| ! | AATACTTTCTTTTTGCAGGA+TGG | + | chr5.2:82561540-82561559 | MS.gene91965:intron | 30.0% |
| ! | AGTTAGCTTCAATTTCTTGA+AGG | - | chr5.2:82564286-82564305 | None:intergenic | 30.0% |
| ! | ATAAAATTGCAGTTTCGAGT+TGG | - | chr5.2:82563034-82563053 | None:intergenic | 30.0% |
| ! | ATTTTCACTTGCATAAGATG+AGG | + | chr5.2:82560527-82560546 | MS.gene91965:intron | 30.0% |
| ! | ATTTTTCCAACAAACAAGAG+TGG | + | chr5.2:82559563-82559582 | MS.gene91965:intron | 30.0% |
| ! | CCTTCCCAATTTTTATAACT+TGG | - | chr5.2:82562598-82562617 | None:intergenic | 30.0% |
| ! | TTATTAATGTTGCTGTTCCT+GGG | + | chr5.2:82560205-82560224 | MS.gene91965:CDS | 30.0% |
| ! | TTGTCTGTCTTTTCATTCTT+TGG | + | chr5.2:82560621-82560640 | MS.gene91965:intron | 30.0% |
| ! | TTTTACTGAGGATGAGATTA+AGG | + | chr5.2:82559201-82559220 | MS.gene91965:CDS | 30.0% |
| ! | TTTTCACTTGCATAAGATGA+GGG | + | chr5.2:82560528-82560547 | MS.gene91965:intron | 30.0% |
| ! | TTTTCCTTAGTAAATGTTGC+TGG | + | chr5.2:82562626-82562645 | MS.gene91965:CDS | 30.0% |
| ! | TTTTTCATTGAACCAACTAC+TGG | + | chr5.2:82562434-82562453 | MS.gene91965:intron | 30.0% |
| !! | ACCATGAAGTTGATTTTTCA+TGG | - | chr5.2:82564553-82564572 | None:intergenic | 30.0% |
| !! | CCTCTGTTTCTATATAATAG+AGG | - | chr5.2:82559497-82559516 | None:intergenic | 30.0% |
| !! | CTTATTTCCTTTTTCACAGA+TGG | + | chr5.2:82562468-82562487 | MS.gene91965:intron | 30.0% |
| !! | GCCTTTTGAGTATCTTTTTT+TGG | + | chr5.2:82561926-82561945 | MS.gene91965:intron | 30.0% |
| !! | TCCCATTTTCAAGAAATTGA+AGG | + | chr5.2:82559165-82559184 | MS.gene91965:CDS | 30.0% |
| !! | TTTTGATTCAAATGTCTGTG+TGG | + | chr5.2:82559756-82559775 | MS.gene91965:intron | 30.0% |
| !!! | CTTCATGGTTTTGTTAAGTT+TGG | + | chr5.2:82564564-82564583 | MS.gene91965:intron | 30.0% |
| !!! | GAGTATCTTTTTTTGGATGA+AGG | + | chr5.2:82561933-82561952 | MS.gene91965:intron | 30.0% |
| AAAACGGGATCTTAATCCAT+GGG | + | chr5.2:82560254-82560273 | MS.gene91965:CDS | 35.0% | |
| AAAACTACTGAACACTGTCA+AGG | - | chr5.2:82561374-82561393 | None:intergenic | 35.0% | |
| AAAAGGCAAAGGAAAAGTAG+CGG | - | chr5.2:82561863-82561882 | None:intergenic | 35.0% | |
| AAAAGTAACCATACCTATGC+TGG | - | chr5.2:82561764-82561783 | None:intergenic | 35.0% | |
| AAGGACAGCAGAAGATAAAA+AGG | - | chr5.2:82561355-82561374 | None:intergenic | 35.0% | |
| AATTTCCACTTGAAGAAAGC+TGG | + | chr5.2:82560898-82560917 | MS.gene91965:CDS | 35.0% | |
| ACCATATTTGCTCTTTCTGT+CGG | - | chr5.2:82561639-82561658 | None:intergenic | 35.0% | |
| ACTCATAGTACTTCAGGATT+TGG | + | chr5.2:82561205-82561224 | MS.gene91965:intron | 35.0% | |
| ACTGTAGAATGAAATTGAGG+AGG | + | chr5.2:82561245-82561264 | MS.gene91965:intron | 35.0% | |
| AGGACAGCAGAAGATAAAAA+GGG | - | chr5.2:82561354-82561373 | None:intergenic | 35.0% | |
| AGTAGTGCAGTTATAGAGTT+AGG | + | chr5.2:82562149-82562168 | MS.gene91965:intron | 35.0% | |
| AGTGGTTAATATTGGTACAC+AGG | + | chr5.2:82560332-82560351 | MS.gene91965:CDS | 35.0% | |
| ATAGAACCCATCTGTGAAAA+AGG | - | chr5.2:82562478-82562497 | None:intergenic | 35.0% | |
| ATCAGACCAAGTACCAAATA+AGG | - | chr5.2:82560471-82560490 | None:intergenic | 35.0% | |
| ATCTGATTTACTCACAGACT+AGG | + | chr5.2:82563368-82563387 | MS.gene91965:intron | 35.0% | |
| ATTGTGGCTTTCATTTCTGT+AGG | + | chr5.2:82562206-82562225 | MS.gene91965:intron | 35.0% | |
| ATTTGCACTTATCTACTACG+AGG | - | chr5.2:82559638-82559657 | None:intergenic | 35.0% | |
| CAGGATAAGAATCTTTCCAA+CGG | + | chr5.2:82564164-82564183 | MS.gene91965:intron | 35.0% | |
| CATCACTTGCTTTCTTAACA+TGG | + | chr5.2:82561150-82561169 | MS.gene91965:intron | 35.0% | |
| CATCAGTAATCTCTTTACCT+TGG | - | chr5.2:82563690-82563709 | None:intergenic | 35.0% | |
| CATGTTAAGAAAGCAAGTGA+TGG | - | chr5.2:82561152-82561171 | None:intergenic | 35.0% | |
| CATTATCTTGTTCAGAACTG+TGG | + | chr5.2:82563269-82563288 | MS.gene91965:intron | 35.0% | |
| CTAAATCAGTGAAGAAACTG+TGG | + | chr5.2:82561328-82561347 | MS.gene91965:intron | 35.0% | |
| CTGATGCTGATATACTAAAC+TGG | + | chr5.2:82563704-82563723 | MS.gene91965:CDS | 35.0% | |
| CTGATTACTGAATCATTGTG+TGG | + | chr5.2:82561431-82561450 | MS.gene91965:intron | 35.0% | |
| CTGGAGTTTAGTTACTAAAG+GGG | + | chr5.2:82564235-82564254 | MS.gene91965:CDS | 35.0% | |
| GCTTTCATTTCTGTAGGAAT+GGG | + | chr5.2:82562212-82562231 | MS.gene91965:intron | 35.0% | |
| GGAAGATGATAAGGTGATAT+TGG | + | chr5.2:82560709-82560728 | MS.gene91965:intron | 35.0% | |
| GGAATTAGTGGAAGATGATA+AGG | + | chr5.2:82560700-82560719 | MS.gene91965:CDS | 35.0% | |
| GGTATTATCTATACTGAACC+TGG | + | chr5.2:82559815-82559834 | MS.gene91965:intron | 35.0% | |
| GTATCTGAAAGAACTCAATC+GGG | + | chr5.2:82559118-82559137 | MS.gene91965:CDS | 35.0% | |
| GTGCAACAAATGCAAGATTA+AGG | - | chr5.2:82561734-82561753 | None:intergenic | 35.0% | |
| GTTACCAGCAACATTTACTA+AGG | - | chr5.2:82562633-82562652 | None:intergenic | 35.0% | |
| GTTAGGAAATGTATAGAGGA+TGG | + | chr5.2:82562166-82562185 | MS.gene91965:intron | 35.0% | |
| TAGGCTCTTAATCCATTCTT+CGG | - | chr5.2:82563335-82563354 | None:intergenic | 35.0% | |
| TATATAATAGAGGGGAGATG+CGG | - | chr5.2:82559487-82559506 | None:intergenic | 35.0% | |
| TATGCAAGTGAAAATGGAGT+AGG | - | chr5.2:82560522-82560541 | None:intergenic | 35.0% | |
| TCAATTCAGCAAAGGCTATT+GGG | + | chr5.2:82560304-82560323 | MS.gene91965:CDS | 35.0% | |
| TCAGATCTTACCTCTCAAAT+AGG | - | chr5.2:82563354-82563373 | None:intergenic | 35.0% | |
| TCCACTAATTCCAAAAGTTG+AGG | - | chr5.2:82560692-82560711 | None:intergenic | 35.0% | |
| TCCTATGCTAGATAACACAT+GGG | - | chr5.2:82563565-82563584 | None:intergenic | 35.0% | |
| TCTTTCGGAAAAAAAGAGGA+CGG | + | chr5.2:82562042-82562061 | MS.gene91965:intron | 35.0% | |
| TGTCATCTAAGCATACATCA+GGG | - | chr5.2:82559400-82559419 | None:intergenic | 35.0% | |
| TTAAGCAAAACTAAGGTGAG+GGG | + | chr5.2:82559534-82559553 | MS.gene91965:intron | 35.0% | |
| TTCAGTAATCAGCATGTTAC+AGG | - | chr5.2:82561423-82561442 | None:intergenic | 35.0% | |
| TTCCGAAATGGCATCTTTAT+AGG | - | chr5.2:82562560-82562579 | None:intergenic | 35.0% | |
| TTTACTGGGAACAAGTATCT+AGG | + | chr5.2:82562126-82562145 | MS.gene91965:intron | 35.0% | |
| TTTGAAAAATAGAAGGGGTG+TGG | + | chr5.2:82559596-82559615 | MS.gene91965:intron | 35.0% | |
| TTTGTGTATTCTACACACAC+CGG | - | chr5.2:82561127-82561146 | None:intergenic | 35.0% | |
| ! | AAAAGCGCGTAAACGAAAAA+AGG | - | chr5.2:82559315-82559334 | None:intergenic | 35.0% |
| ! | AAGAGAAAGTTCTAGTCTAG+TGG | - | chr5.2:82562026-82562045 | None:intergenic | 35.0% |
| ! | AAGATCCCGTTTTGTGTTAA+TGG | - | chr5.2:82560247-82560266 | None:intergenic | 35.0% |
| ! | AATGGAACATCCAAGTTTTC+TGG | - | chr5.2:82564453-82564472 | None:intergenic | 35.0% |
| ! | ATAAAGGGAGAGAAAGGTAT+AGG | - | chr5.2:82563454-82563473 | None:intergenic | 35.0% |
| ! | ATCTGAAATGGAGAGTTTCA+AGG | + | chr5.2:82563759-82563778 | MS.gene91965:CDS | 35.0% |
| ! | ATTGAACCAACTACTGGTTA+TGG | + | chr5.2:82562440-82562459 | MS.gene91965:intron | 35.0% |
| ! | CAAATTTTCCAGCATAGGTA+TGG | + | chr5.2:82561753-82561772 | MS.gene91965:intron | 35.0% |
| ! | CAAGAAATTGAAGGCTTTTG+CGG | + | chr5.2:82559174-82559193 | MS.gene91965:CDS | 35.0% |
| ! | CTCCTATAAAGATGCCATTT+CGG | + | chr5.2:82562555-82562574 | MS.gene91965:CDS | 35.0% |
| ! | CTGGTAACGATATTGTTCAA+GGG | + | chr5.2:82562645-82562664 | MS.gene91965:CDS | 35.0% |
| ! | CTTATTAATGTTGCTGTTCC+TGG | + | chr5.2:82560204-82560223 | MS.gene91965:CDS | 35.0% |
| ! | GAAGAAAACTCCTCAACTTT+TGG | + | chr5.2:82560679-82560698 | MS.gene91965:CDS | 35.0% |
| ! | TCTAAGACTCATAGTACTTC+AGG | + | chr5.2:82561199-82561218 | MS.gene91965:intron | 35.0% |
| ! | TGAGTTTTTGTGAAGCCTTA+AGG | - | chr5.2:82563411-82563430 | None:intergenic | 35.0% |
| ! | TGTTTTCTTCAGAATTCAGC+AGG | - | chr5.2:82564775-82564794 | None:intergenic | 35.0% |
| ! | TTAATTCGACTTGAGTGAAC+TGG | - | chr5.2:82558956-82558975 | None:intergenic | 35.0% |
| ! | TTGAAAAATAGAAGGGGTGT+GGG | + | chr5.2:82559597-82559616 | MS.gene91965:intron | 35.0% |
| ! | TTGCACAAATTTTCCAGCAT+AGG | + | chr5.2:82561748-82561767 | MS.gene91965:CDS | 35.0% |
| ! | TTTACTCACAGACTAGGTTT+TGG | + | chr5.2:82563374-82563393 | MS.gene91965:intron | 35.0% |
| ! | TTTTGCGGAGTTTTTTACTG+AGG | + | chr5.2:82559189-82559208 | MS.gene91965:CDS | 35.0% |
| !! | GTGTTCTTGTTTCTGATCAA+TGG | + | chr5.2:82558922-82558941 | MS.gene91965:CDS | 35.0% |
| !! | GTTTTTCAGAAGTTGAAGCA+TGG | - | chr5.2:82563653-82563672 | None:intergenic | 35.0% |
| !! | TGATTTTGAGTCCTTCCTTA+GGG | + | chr5.2:82559264-82559283 | MS.gene91965:CDS | 35.0% |
| !! | TTGATTTTGAGTCCTTCCTT+AGG | + | chr5.2:82559263-82559282 | MS.gene91965:CDS | 35.0% |
| !! | TTGTAGCCTTATTTGGTACT+TGG | + | chr5.2:82560462-82560481 | MS.gene91965:intron | 35.0% |
| !! | TTTTCGAGGATGTCAGAAAT+GGG | + | chr5.2:82562362-82562381 | MS.gene91965:CDS | 35.0% |
| !!! | CGGACAAGGTTTTATTGAAA+TGG | + | chr5.2:82560872-82560891 | MS.gene91965:CDS | 35.0% |
| !!! | GCATAGGTATGGTTACTTTT+AGG | + | chr5.2:82561764-82561783 | MS.gene91965:intron | 35.0% |
| !!! | TAGGTATGGTTACTTTTAGG+AGG | + | chr5.2:82561767-82561786 | MS.gene91965:intron | 35.0% |
| !!! | TCCTCAACTTTTGGAATTAG+TGG | + | chr5.2:82560688-82560707 | MS.gene91965:CDS | 35.0% |
| !!! | TTTGTCCAACAGCTTTTTTG+TGG | + | chr5.2:82563611-82563630 | MS.gene91965:intron | 35.0% |
| AAAGGCAAAGGAAAAGTAGC+GGG | - | chr5.2:82561862-82561881 | None:intergenic | 40.0% | |
| AAGAAAGATGCTTCAGACTC+TGG | + | chr5.2:82562302-82562321 | MS.gene91965:CDS | 40.0% | |
| ACGATGATAAAGGGAGAGAA+AGG | - | chr5.2:82563460-82563479 | None:intergenic | 40.0% | |
| ACTCCAAAGGACATAGTTGA+AGG | + | chr5.2:82561699-82561718 | MS.gene91965:CDS | 40.0% | |
| AGCAAATATGGTTCTTGAGC+AGG | + | chr5.2:82561647-82561666 | MS.gene91965:CDS | 40.0% | |
| AGCGAGCCATTAACACAAAA+CGG | + | chr5.2:82560238-82560257 | MS.gene91965:CDS | 40.0% | |
| AGGAACTGTGTGTCTGTATT+AGG | + | chr5.2:82563087-82563106 | MS.gene91965:intron | 40.0% | |
| AGGACAAATGTGAACAGGAA+AGG | - | chr5.2:82562396-82562415 | None:intergenic | 40.0% | |
| AGTACAGGACAAATGTGAAC+AGG | - | chr5.2:82562401-82562420 | None:intergenic | 40.0% | |
| ATCAGTGTTGCCAGAAAACT+TGG | + | chr5.2:82564440-82564459 | MS.gene91965:CDS | 40.0% | |
| ATGAAGGGCTTCTTAGTATC+CGG | + | chr5.2:82561949-82561968 | MS.gene91965:intron | 40.0% | |
| CAAAACGGGATCTTAATCCA+TGG | + | chr5.2:82560253-82560272 | MS.gene91965:CDS | 40.0% | |
| CAAAGCACACGCAAACATAT+CGG | - | chr5.2:82562741-82562760 | None:intergenic | 40.0% | |
| CAATAGCCTTTGCTGAATTG+AGG | - | chr5.2:82560305-82560324 | None:intergenic | 40.0% | |
| CATAACCAGCTTTCTTCAAG+TGG | - | chr5.2:82560906-82560925 | None:intergenic | 40.0% | |
| CGAAATGGCATCTTTATAGG+AGG | - | chr5.2:82562557-82562576 | None:intergenic | 40.0% | |
| CGCACACATTAACAGTTACT+TGG | + | chr5.2:82559991-82560010 | MS.gene91965:CDS | 40.0% | |
| CTACACTCACCATGGAAATA+AGG | - | chr5.2:82562897-82562916 | None:intergenic | 40.0% | |
| CTCAAGGAAGAAAATTCCGT+TGG | - | chr5.2:82564183-82564202 | None:intergenic | 40.0% | |
| CTCAATTCAGCAAAGGCTAT+TGG | + | chr5.2:82560303-82560322 | MS.gene91965:CDS | 40.0% | |
| CTCATCTGATGTAAAGGTGA+GGG | + | chr5.2:82560945-82560964 | MS.gene91965:intron | 40.0% | |
| CTCCAAAGGACATAGTTGAA+GGG | + | chr5.2:82561700-82561719 | MS.gene91965:CDS | 40.0% | |
| CTCCATTTCAGATGTTCTTC+CGG | - | chr5.2:82563752-82563771 | None:intergenic | 40.0% | |
| CTCCTATGCTAGATAACACA+TGG | - | chr5.2:82563566-82563585 | None:intergenic | 40.0% | |
| CTTTCGGAAAAAAAGAGGAC+GGG | + | chr5.2:82562043-82562062 | MS.gene91965:intron | 40.0% | |
| GACATTCTTGTATGTTCTCG+TGG | - | chr5.2:82559662-82559681 | None:intergenic | 40.0% | |
| GCATTTGTAGACGGATCAAT+TGG | - | chr5.2:82560046-82560065 | None:intergenic | 40.0% | |
| GCTTCAATTTCTTGAAGGTG+TGG | - | chr5.2:82564281-82564300 | None:intergenic | 40.0% | |
| GGAAATCCATAACCAGTAGT+TGG | - | chr5.2:82562449-82562468 | None:intergenic | 40.0% | |
| GGAAGAGTCGTATCAGAATA+TGG | + | chr5.2:82559231-82559250 | MS.gene91965:CDS | 40.0% | |
| GGATGAGATTAAGGCTGTAT+TGG | + | chr5.2:82559210-82559229 | MS.gene91965:CDS | 40.0% | |
| GGATTAAGAGCCTATTTGAG+AGG | + | chr5.2:82563341-82563360 | MS.gene91965:intron | 40.0% | |
| GGCTTTCATTTCTGTAGGAA+TGG | + | chr5.2:82562211-82562230 | MS.gene91965:intron | 40.0% | |
| GGGAATAAGAAGCTCTTACT+AGG | + | chr5.2:82562665-82562684 | MS.gene91965:CDS | 40.0% | |
| GTGTCATCTAAGCATACATC+AGG | - | chr5.2:82559401-82559420 | None:intergenic | 40.0% | |
| GTTCTTGATAAGGTTTCACC+TGG | + | chr5.2:82562503-82562522 | MS.gene91965:CDS | 40.0% | |
| TAGATAACACATGGGCAACA+GGG | - | chr5.2:82563557-82563576 | None:intergenic | 40.0% | |
| TATCGAACGTATGCTATGTG+AGG | - | chr5.2:82561465-82561484 | None:intergenic | 40.0% | |
| TATCTGCTAGCATCATGTAC+TGG | + | chr5.2:82564747-82564766 | MS.gene91965:CDS | 40.0% | |
| TATGACAAAATGGCAGGATG+TGG | + | chr5.2:82560828-82560847 | MS.gene91965:intron | 40.0% | |
| TCCGACAGAAAGAGCAAATA+TGG | + | chr5.2:82561635-82561654 | MS.gene91965:CDS | 40.0% | |
| TCTATAGCTGATGGAGATTG+TGG | + | chr5.2:82562190-82562209 | MS.gene91965:intron | 40.0% | |
| TCTCATCTGATGTAAAGGTG+AGG | + | chr5.2:82560944-82560963 | MS.gene91965:intron | 40.0% | |
| TCTTTCTGTCGGATCACTTA+TGG | - | chr5.2:82561628-82561647 | None:intergenic | 40.0% | |
| TGTGACGAAGTTCTGTTGAT+TGG | + | chr5.2:82563245-82563264 | MS.gene91965:intron | 40.0% | |
| TTAGTTACTAAAGGGGAGAC+TGG | + | chr5.2:82564242-82564261 | MS.gene91965:CDS | 40.0% | |
| TTCAATAAAACCTTGTCCGG+TGG | - | chr5.2:82560871-82560890 | None:intergenic | 40.0% | |
| TTCTACATCTACACTCACCA+TGG | - | chr5.2:82562905-82562924 | None:intergenic | 40.0% | |
| TTTCAAATCGAAACACCGCA+TGG | + | chr5.2:82563005-82563024 | MS.gene91965:intron | 40.0% | |
| TTTCACCTGGATCTGTCAAT+TGG | + | chr5.2:82562516-82562535 | MS.gene91965:CDS | 40.0% | |
| TTTCGGAAAAAAAGAGGACG+GGG | + | chr5.2:82562044-82562063 | MS.gene91965:intron | 40.0% | |
| ! | AAAGATGCCATTTCGGAAAG+TGG | + | chr5.2:82562562-82562581 | MS.gene91965:CDS | 40.0% |
| ! | CACTAACCACTCTTGTTTGT+TGG | - | chr5.2:82559572-82559591 | None:intergenic | 40.0% |
| ! | CGCAGTTCTGACAAATGAAA+AGG | - | chr5.2:82560784-82560803 | None:intergenic | 40.0% |
| ! | GCTGGTAACGATATTGTTCA+AGG | + | chr5.2:82562644-82562663 | MS.gene91965:CDS | 40.0% |
| ! | TTCCATTTTCCTGTTACCTG+AGG | + | chr5.2:82564466-82564485 | MS.gene91965:CDS | 40.0% |
| ! | TTTCTTTTTGCAGGATGGAG+AGG | + | chr5.2:82561545-82561564 | MS.gene91965:intron | 40.0% |
| ! | TTTTGTGAAGCCTTAAGGCA+GGG | - | chr5.2:82563406-82563425 | None:intergenic | 40.0% |
| ! | TTTTTGTGAAGCCTTAAGGC+AGG | - | chr5.2:82563407-82563426 | None:intergenic | 40.0% |
| !! | GTTTTCGAGGATGTCAGAAA+TGG | + | chr5.2:82562361-82562380 | MS.gene91965:CDS | 40.0% |
| AAAAGAGCTCACCCTAAGGA+AGG | - | chr5.2:82559278-82559297 | None:intergenic | 45.0% | |
| AACTTGAGATCACACTCCCA+AGG | + | chr5.2:82563670-82563689 | MS.gene91965:CDS | 45.0% | |
| AGACTCTGGATCAACAGTCT+TGG | + | chr5.2:82562316-82562335 | MS.gene91965:CDS | 45.0% | |
| AGATAACACATGGGCAACAG+GGG | - | chr5.2:82563556-82563575 | None:intergenic | 45.0% | |
| AGCCGGAAGAACATCTGAAA+TGG | + | chr5.2:82563747-82563766 | MS.gene91965:CDS | 45.0% | |
| AGCTGCCACAAAAAAGCTGT+TGG | - | chr5.2:82563619-82563638 | None:intergenic | 45.0% | |
| AGGAATGAAAACCACACCCT+TGG | + | chr5.2:82560279-82560298 | MS.gene91965:CDS | 45.0% | |
| ATCAGTCATCATCTCAGCGA+AGG | - | chr5.2:82562263-82562282 | None:intergenic | 45.0% | |
| CAAGAACATATCGGGCCTAT+TGG | - | chr5.2:82562814-82562833 | None:intergenic | 45.0% | |
| CAAGAGATACCTCACTCCAA+AGG | + | chr5.2:82561686-82561705 | MS.gene91965:CDS | 45.0% | |
| CACTTATGGTCAAGGCAGAT+GGG | - | chr5.2:82561614-82561633 | None:intergenic | 45.0% | |
| CAGTTCTCCACTTTCCGAAA+TGG | - | chr5.2:82562572-82562591 | None:intergenic | 45.0% | |
| CGAAAAAAGAGCTCACCCTA+AGG | - | chr5.2:82559282-82559301 | None:intergenic | 45.0% | |
| CGATTATGTCCTCAGGTAAC+AGG | - | chr5.2:82564478-82564497 | None:intergenic | 45.0% | |
| CGCTGATCATTTACCAAAGC+AGG | - | chr5.2:82560096-82560115 | None:intergenic | 45.0% | |
| CTAAAGATGGAGTCCTGCTT+TGG | + | chr5.2:82560080-82560099 | MS.gene91965:CDS | 45.0% | |
| CTAGATAACACATGGGCAAC+AGG | - | chr5.2:82563558-82563577 | None:intergenic | 45.0% | |
| CTGAGGACATAATCGAGGTA+AGG | + | chr5.2:82564483-82564502 | MS.gene91965:intron | 45.0% | |
| CTGTATTAGGCGACTCTTGA+TGG | + | chr5.2:82563100-82563119 | MS.gene91965:intron | 45.0% | |
| CTTACCTCGATTATGTCCTC+AGG | - | chr5.2:82564485-82564504 | None:intergenic | 45.0% | |
| CTTTGCTGAATTGAGGCCAA+GGG | - | chr5.2:82560298-82560317 | None:intergenic | 45.0% | |
| GACCCTTCAACTATGTCCTT+TGG | - | chr5.2:82561705-82561724 | None:intergenic | 45.0% | |
| GAGGATGGATCTATAGCTGA+TGG | + | chr5.2:82562181-82562200 | MS.gene91965:intron | 45.0% | |
| GCCCATGTGTTATCTAGCAT+AGG | + | chr5.2:82563561-82563580 | MS.gene91965:intron | 45.0% | |
| GCGAGCCATTAACACAAAAC+GGG | + | chr5.2:82560239-82560258 | MS.gene91965:CDS | 45.0% | |
| GGAGCTTATCAGTTTACCAC+CGG | + | chr5.2:82560852-82560871 | MS.gene91965:CDS | 45.0% | |
| GGGTGCACAGTGGTTAATAT+TGG | + | chr5.2:82560324-82560343 | MS.gene91965:CDS | 45.0% | |
| GGTACACAGGATATGGTTGA+AGG | + | chr5.2:82560345-82560364 | MS.gene91965:CDS | 45.0% | |
| GTCCTCAGGTAACAGGAAAA+TGG | - | chr5.2:82564471-82564490 | None:intergenic | 45.0% | |
| GTTACCTGAGGACATAATCG+AGG | + | chr5.2:82564478-82564497 | MS.gene91965:CDS | 45.0% | |
| TATCAGTTTACCACCGGACA+AGG | + | chr5.2:82560858-82560877 | MS.gene91965:CDS | 45.0% | |
| TCACTTATGGTCAAGGCAGA+TGG | - | chr5.2:82561615-82561634 | None:intergenic | 45.0% | |
| TCTACAGTTCATCGCACTAG+AGG | - | chr5.2:82561233-82561252 | None:intergenic | 45.0% | |
| TGCTTCCAATTGACAGATCC+AGG | - | chr5.2:82562524-82562543 | None:intergenic | 45.0% | |
| TGGATCTGTCAATTGGAAGC+AGG | + | chr5.2:82562523-82562542 | MS.gene91965:CDS | 45.0% | |
| TGTCGGATCACTTATGGTCA+AGG | - | chr5.2:82561622-82561641 | None:intergenic | 45.0% | |
| TTCGGAAAAAAAGAGGACGG+GGG | + | chr5.2:82562045-82562064 | MS.gene91965:intron | 45.0% | |
| ! | CAATCGGGTCGTGTTATTGT+GGG | + | chr5.2:82559133-82559152 | MS.gene91965:CDS | 45.0% |
| ! | CTGATGATGCACAGACATCT+CGG | + | chr5.2:82562278-82562297 | MS.gene91965:CDS | 45.0% |
| ! | GGGAGAGAAAGGTATAGGAT+AGG | - | chr5.2:82563449-82563468 | None:intergenic | 45.0% |
| ! | TCAATCGGGTCGTGTTATTG+TGG | + | chr5.2:82559132-82559151 | MS.gene91965:CDS | 45.0% |
| ! | TGATGATGCACAGACATCTC+GGG | + | chr5.2:82562279-82562298 | MS.gene91965:CDS | 45.0% |
| ! | TGGTTTTCATTCCTCTCCCA+TGG | - | chr5.2:82560273-82560292 | None:intergenic | 45.0% |
| !! | AAGGAAAAGTAGCGGGTTCT+TGG | - | chr5.2:82561855-82561874 | None:intergenic | 45.0% |
| !! | ACATGGTTCTAAATTGCGCG+CGG | + | chr5.2:82561501-82561520 | MS.gene91965:intron | 45.0% |
| !! | CAACTATGTCCTTTGGAGTG+AGG | - | chr5.2:82561698-82561717 | None:intergenic | 45.0% |
| !! | CTAGCATAGGAGTGTCTAAC+AGG | + | chr5.2:82563574-82563593 | MS.gene91965:intron | 45.0% |
| !! | GTTTCGAGTTGGTTTCCATG+CGG | - | chr5.2:82563023-82563042 | None:intergenic | 45.0% |
| !!! | AAGGGGTGTGGGTGTTATTT+TGG | + | chr5.2:82559608-82559627 | MS.gene91965:intron | 45.0% |
| AAACTCCAGTTGACCACCCT+TGG | - | chr5.2:82564224-82564243 | None:intergenic | 50.0% | |
| AAAGGCTATTGGGTGCACAG+TGG | + | chr5.2:82560314-82560333 | MS.gene91965:CDS | 50.0% | |
| AGGGGAGATGCGGATAATTG+AGG | - | chr5.2:82559477-82559496 | None:intergenic | 50.0% | |
| ATCTGCTGAAGCTACAGGTG+AGG | - | chr5.2:82564810-82564829 | None:intergenic | 50.0% | |
| CAAACTCGAGCTGCAGCAAA+AGG | + | chr5.2:82559881-82559900 | MS.gene91965:CDS | 50.0% | |
| CAGAACAACAGGGGCTCATA+AGG | - | chr5.2:82561303-82561322 | None:intergenic | 50.0% | |
| CCTTGGCCTCAATTCAGCAA+AGG | + | chr5.2:82560296-82560315 | MS.gene91965:CDS | 50.0% | |
| CCTTTGCTGAATTGAGGCCA+AGG | - | chr5.2:82560299-82560318 | None:intergenic | 50.0% | |
| GAAGCTACAGGTGAGGTTTC+TGG | - | chr5.2:82564803-82564822 | None:intergenic | 50.0% | |
| GACAAAATGGCAGGATGTGG+AGG | + | chr5.2:82560831-82560850 | MS.gene91965:intron | 50.0% | |
| GGGATCTTAATCCATGGGAG+AGG | + | chr5.2:82560259-82560278 | MS.gene91965:CDS | 50.0% | |
| TCACCATCTGCTGAAGCTAC+AGG | - | chr5.2:82564815-82564834 | None:intergenic | 50.0% | |
| TCACCTGTAGCTTCAGCAGA+TGG | + | chr5.2:82564809-82564828 | MS.gene91965:CDS | 50.0% | |
| !! | CATGGTTCTAAATTGCGCGC+GGG | + | chr5.2:82561502-82561521 | MS.gene91965:intron | 50.0% |
| AACACATGGGCAACAGGGGA+AGG | - | chr5.2:82563552-82563571 | None:intergenic | 55.0% | |
| AAGAGGACGGGGGTAGTTGA+TGG | + | chr5.2:82562055-82562074 | MS.gene91965:intron | 55.0% | |
| ACACATGGGCAACAGGGGAA+GGG | - | chr5.2:82563551-82563570 | None:intergenic | 55.0% | |
| ACTCGAGCTGCAGCAAAAGG+TGG | + | chr5.2:82559884-82559903 | MS.gene91965:CDS | 55.0% | |
| CCACAGCGCTCAAAAGCTCA+AGG | - | chr5.2:82564199-82564218 | None:intergenic | 55.0% | |
| CCGCACAGGCAAGGTTGTTA+CGG | + | chr5.2:82563504-82563523 | MS.gene91965:intron | 55.0% | |
| CCGTAACAACCTTGCCTGTG+CGG | - | chr5.2:82563507-82563526 | None:intergenic | 55.0% | |
| CGTAACAACCTTGCCTGTGC+GGG | - | chr5.2:82563506-82563525 | None:intergenic | 55.0% | |
| CTGAATTGAGGCCAAGGGTG+TGG | - | chr5.2:82560293-82560312 | None:intergenic | 55.0% | |
| GCTCGCTCATCTATTGTCCC+AGG | - | chr5.2:82560225-82560244 | None:intergenic | 55.0% | |
| GCTCTTGCTCCAGAAACTGC+AGG | + | chr5.2:82561588-82561607 | MS.gene91965:CDS | 55.0% | |
| TGTGAAGCCTTAAGGCAGGG+AGG | - | chr5.2:82563403-82563422 | None:intergenic | 55.0% | |
| TTGGCAACCTCCCTGCCTTA+AGG | + | chr5.2:82563393-82563412 | MS.gene91965:intron | 55.0% | |
| ! | TTTGAGCGCTGTGGAGCCAA+GGG | + | chr5.2:82564205-82564224 | MS.gene91965:CDS | 55.0% |
| !! | CCTTGAGCTTTTGAGCGCTG+TGG | + | chr5.2:82564196-82564215 | MS.gene91965:CDS | 55.0% |
| !! | TTTTGAGCGCTGTGGAGCCA+AGG | + | chr5.2:82564204-82564223 | MS.gene91965:CDS | 55.0% |
| ACATGGGCAACAGGGGAAGG+GGG | - | chr5.2:82563549-82563568 | None:intergenic | 60.0% | |
| AGGGGAAGGGGGGAAGAAAC+AGG | - | chr5.2:82563538-82563557 | None:intergenic | 60.0% | |
| CAAAGGGGCAGTGTGCACAG+TGG | + | chr5.2:82564082-82564101 | MS.gene91965:intron | 60.0% | |
| CACATGGGCAACAGGGGAAG+GGG | - | chr5.2:82563550-82563569 | None:intergenic | 60.0% | |
| CGAGCTGCAGCAAAAGGTGG+CGG | + | chr5.2:82559887-82559906 | MS.gene91965:CDS | 60.0% | |
| GCAGATGGGCCTGCAGTTTC+TGG | - | chr5.2:82561600-82561619 | None:intergenic | 60.0% | |
| TGGAGCCAAGGGTGGTCAAC+TGG | + | chr5.2:82564216-82564235 | MS.gene91965:CDS | 60.0% | |
| CAACCTTGCCTGTGCGGGCA+AGG | - | chr5.2:82563501-82563520 | None:intergenic | 65.0% | |
| CATGGGCAACAGGGGAAGGG+GGG | - | chr5.2:82563548-82563567 | None:intergenic | 65.0% | |
| CTTGCCTGTGCGGGCAAGGA+GGG | - | chr5.2:82563497-82563516 | None:intergenic | 65.0% | |
| TGCGGGCAAGGAGGGGGAAA+CGG | - | chr5.2:82563489-82563508 | None:intergenic | 65.0% | |
| TTGCCTGTGCGGGCAAGGAG+GGG | - | chr5.2:82563496-82563515 | None:intergenic | 65.0% | |
| CCTCCTTGCCCGCACAGGCA+AGG | + | chr5.2:82563495-82563514 | MS.gene91965:intron | 70.0% | |
| CCTTGCCTGTGCGGGCAAGG+AGG | - | chr5.2:82563498-82563517 | None:intergenic | 70.0% | |
| TGCCTGTGCGGGCAAGGAGG+GGG | - | chr5.2:82563495-82563514 | None:intergenic | 70.0% | |
| TTCCCCCTCCTTGCCCGCAC+AGG | + | chr5.2:82563490-82563509 | MS.gene91965:intron | 70.0% | |
| ! | GAGCGCTGTGGAGCCAAGGG+TGG | + | chr5.2:82564208-82564227 | MS.gene91965:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 82558906 | 82564913 | 82558906 | ID=MS.gene91965 |
| chr5.2 | mRNA | 82558906 | 82564913 | 82558906 | ID=MS.gene91965.t1;Parent=MS.gene91965 |
| chr5.2 | exon | 82558906 | 82558992 | 82558906 | ID=MS.gene91965.t1.exon1;Parent=MS.gene91965.t1 |
| chr5.2 | CDS | 82558906 | 82558992 | 82558906 | ID=cds.MS.gene91965.t1;Parent=MS.gene91965.t1 |
| chr5.2 | exon | 82559115 | 82559285 | 82559115 | ID=MS.gene91965.t1.exon2;Parent=MS.gene91965.t1 |
| chr5.2 | CDS | 82559115 | 82559285 | 82559115 | ID=cds.MS.gene91965.t1;Parent=MS.gene91965.t1 |
| chr5.2 | exon | 82559866 | 82560101 | 82559866 | ID=MS.gene91965.t1.exon3;Parent=MS.gene91965.t1 |
| chr5.2 | CDS | 82559866 | 82560101 | 82559866 | ID=cds.MS.gene91965.t1;Parent=MS.gene91965.t1 |
| chr5.2 | exon | 82560200 | 82560371 | 82560200 | ID=MS.gene91965.t1.exon4;Parent=MS.gene91965.t1 |
| chr5.2 | CDS | 82560200 | 82560371 | 82560200 | ID=cds.MS.gene91965.t1;Parent=MS.gene91965.t1 |
| chr5.2 | exon | 82560468 | 82560506 | 82560468 | ID=MS.gene91965.t1.exon5;Parent=MS.gene91965.t1 |
| chr5.2 | CDS | 82560468 | 82560506 | 82560468 | ID=cds.MS.gene91965.t1;Parent=MS.gene91965.t1 |
| chr5.2 | exon | 82560653 | 82560721 | 82560653 | ID=MS.gene91965.t1.exon6;Parent=MS.gene91965.t1 |
| chr5.2 | CDS | 82560653 | 82560721 | 82560653 | ID=cds.MS.gene91965.t1;Parent=MS.gene91965.t1 |
| chr5.2 | exon | 82560844 | 82560960 | 82560844 | ID=MS.gene91965.t1.exon7;Parent=MS.gene91965.t1 |
| chr5.2 | CDS | 82560844 | 82560960 | 82560844 | ID=cds.MS.gene91965.t1;Parent=MS.gene91965.t1 |
| chr5.2 | exon | 82561558 | 82561769 | 82561558 | ID=MS.gene91965.t1.exon8;Parent=MS.gene91965.t1 |
| chr5.2 | CDS | 82561558 | 82561769 | 82561558 | ID=cds.MS.gene91965.t1;Parent=MS.gene91965.t1 |
| chr5.2 | exon | 82562228 | 82562383 | 82562228 | ID=MS.gene91965.t1.exon9;Parent=MS.gene91965.t1 |
| chr5.2 | CDS | 82562228 | 82562383 | 82562228 | ID=cds.MS.gene91965.t1;Parent=MS.gene91965.t1 |
| chr5.2 | exon | 82562487 | 82562686 | 82562487 | ID=MS.gene91965.t1.exon10;Parent=MS.gene91965.t1 |
| chr5.2 | CDS | 82562487 | 82562686 | 82562487 | ID=cds.MS.gene91965.t1;Parent=MS.gene91965.t1 |
| chr5.2 | exon | 82563623 | 82563780 | 82563623 | ID=MS.gene91965.t1.exon11;Parent=MS.gene91965.t1 |
| chr5.2 | CDS | 82563623 | 82563780 | 82563623 | ID=cds.MS.gene91965.t1;Parent=MS.gene91965.t1 |
| chr5.2 | exon | 82564167 | 82564263 | 82564167 | ID=MS.gene91965.t1.exon12;Parent=MS.gene91965.t1 |
| chr5.2 | CDS | 82564167 | 82564263 | 82564167 | ID=cds.MS.gene91965.t1;Parent=MS.gene91965.t1 |
| chr5.2 | exon | 82564408 | 82564499 | 82564408 | ID=MS.gene91965.t1.exon13;Parent=MS.gene91965.t1 |
| chr5.2 | CDS | 82564408 | 82564499 | 82564408 | ID=cds.MS.gene91965.t1;Parent=MS.gene91965.t1 |
| chr5.2 | exon | 82564722 | 82564913 | 82564722 | ID=MS.gene91965.t1.exon14;Parent=MS.gene91965.t1 |
| chr5.2 | CDS | 82564722 | 82564913 | 82564722 | ID=cds.MS.gene91965.t1;Parent=MS.gene91965.t1 |
| Gene Sequence |
| Protein sequence |
