AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene011293


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011293.t1 MTR_4g130770 97.179 638 11 2 1 638 1 631 0.0 1256
MS.gene011293.t1 MTR_4g010050 30.962 239 147 3 399 637 75 295 1.39e-30 126
MS.gene011293.t1 MTR_7g104890 34.536 194 116 2 432 625 33 215 3.92e-30 123
MS.gene011293.t1 MTR_7g104890 28.082 292 192 4 334 625 75 348 1.31e-29 124
MS.gene011293.t1 MTR_2g104050 30.544 239 148 3 399 637 75 295 1.92e-29 122
MS.gene011293.t1 MTR_8g032340 27.517 298 185 8 350 637 94 370 4.94e-19 89.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011293.t1 AT4G30600 75.000 652 131 12 1 638 1 634 0.0 888
MS.gene011293.t1 AT4G30600 75.000 652 131 12 1 638 1 634 0.0 888
MS.gene011293.t1 AT1G48900 26.797 306 206 3 332 637 8 295 6.02e-32 129
MS.gene011293.t1 AT1G48900 26.797 306 206 3 332 637 8 295 6.17e-32 130
MS.gene011293.t1 AT5G03940 28.571 294 192 4 332 625 83 358 1.05e-31 130
MS.gene011293.t1 AT1G15310 28.727 275 178 3 363 637 39 295 1.49e-31 129
MS.gene011293.t1 AT2G45770 29.667 300 180 8 346 637 89 365 4.42e-27 113
MS.gene011293.t1 AT5G49500 24.351 308 213 4 332 637 8 297 2.97e-23 104
MS.gene011293.t1 AT5G49500 29.480 173 111 2 465 637 14 175 7.65e-20 92.4

Find 142 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGTTTCATCCTTTCATTTA+AGG 0.135782 8.2:-74841955 None:intergenic
GGATAGGAAGGTTGATTATT+TGG 0.186314 8.2:+74838587 MS.gene011293:CDS
CTTTCAATGGTTTACATATC+TGG 0.196127 8.2:+74841851 MS.gene011293:CDS
CTTTGGTCATGCAATGAAAT+TGG 0.219547 8.2:+74837793 MS.gene011293:CDS
TGATTATGCAGGTTGCTTAC+TGG 0.239203 8.2:+74840160 MS.gene011293:intron
GTTGGTAATGTTAGTGTAAA+TGG 0.240516 8.2:+74838348 MS.gene011293:CDS
CATAACCCTTCTCAAATATA+GGG 0.264100 8.2:-74840363 None:intergenic
TCATAACCCTTCTCAAATAT+AGG 0.269160 8.2:-74840364 None:intergenic
CCTGACCTTGTCTTATTTGT+TGG 0.272603 8.2:+74841200 MS.gene011293:CDS
GTTGTATTTGTTGGAGTTAA+TGG 0.282982 8.2:+74840015 MS.gene011293:CDS
CTTTATTCCTAACCTTCTTC+TGG 0.284805 8.2:-74838419 None:intergenic
TATTGCTGGGAAGGCCAATT+TGG 0.285068 8.2:+74839507 MS.gene011293:CDS
GGCAGTGCTGGTGGCGGCGG+CGG 0.324669 8.2:+74838216 MS.gene011293:CDS
CCATATGTTGTTGTATTTGT+TGG 0.324829 8.2:+74840006 MS.gene011293:CDS
CAAGTCCGACTTCTCCAAAT+TGG 0.330709 8.2:-74839521 None:intergenic
TGATTTGCTTGCTGCTGTTA+AGG 0.337905 8.2:+74838005 MS.gene011293:CDS
CAAGAGGAGGATTAATCCTT+TGG 0.352909 8.2:+74837776 MS.gene011293:CDS
AACCAAGGCTGAGCCGAAAA+AGG 0.357649 8.2:+74838473 MS.gene011293:CDS
GACTCATGCACGCAGACTTC+AGG 0.360707 8.2:+74840257 MS.gene011293:CDS
AGTGCTGGTGGCGGCGGCGG+TGG 0.364428 8.2:+74838219 MS.gene011293:CDS
ATGCTTGTGCTCAGTATTGC+TGG 0.365590 8.2:+74839493 MS.gene011293:intron
CAAGATCCCATCAATCAATC+TGG 0.383740 8.2:-74841409 None:intergenic
GAGTTTCTTGAGGTCGGTAT+AGG 0.387081 8.2:-74841906 None:intergenic
CAGAAGAAGGTTAGGAATAA+AGG 0.388438 8.2:+74838420 MS.gene011293:CDS
ACGGATCATGTTGATGTTGA+TGG 0.394256 8.2:+74838552 MS.gene011293:CDS
GGTGGGAGCTGCACTTTCAA+TGG 0.401497 8.2:+74841838 MS.gene011293:intron
GATTTGCTTGCTGCTGTTAA+GGG 0.405066 8.2:+74838006 MS.gene011293:CDS
TTGAGAAGTAACGGTGTTGT+TGG 0.406379 8.2:+74838330 MS.gene011293:CDS
CTGTGGTTGTAGGTGGGAAT+AGG 0.413522 8.2:+74838145 MS.gene011293:CDS
ATAAATACATACCACATTCT+TGG 0.414415 8.2:-74839581 None:intergenic
TCCTTCAGAGCTTTCAAAGC+TGG 0.420133 8.2:-74839547 None:intergenic
GTTTGACACTATTGATGATA+AGG 0.420806 8.2:+74841440 MS.gene011293:CDS
CCAACAAATACAACAACATA+TGG 0.423685 8.2:-74840006 None:intergenic
AAATCTAATTTAGTTTCAAC+GGG 0.426379 8.2:-74838528 None:intergenic
TGTGGCAAAAGAAGCAATTC+AGG 0.429961 8.2:+74840402 MS.gene011293:CDS
AATGGCAGTGCTGGTGGCGG+CGG 0.430153 8.2:+74838213 MS.gene011293:CDS
TTTGACAGGGCTCTCATCAA+TGG 0.430819 8.2:-74841158 None:intergenic
CAATTTGGAGAAGTCGGACT+TGG 0.441725 8.2:+74839522 MS.gene011293:CDS
TGTTGATGGGGATGCTGATA+AGG 0.462630 8.2:+74838566 MS.gene011293:CDS
GGAAGCTTCACGGAATGGTT+CGG 0.463640 8.2:+74840423 MS.gene011293:CDS
ATAGGCTCCAGAAGAAGGTT+AGG 0.465195 8.2:+74838412 MS.gene011293:CDS
AAAATCTAATTTAGTTTCAA+CGG 0.465883 8.2:-74838529 None:intergenic
GGCGTTCTATTGACATATTG+AGG 0.470946 8.2:+74839953 MS.gene011293:CDS
AAATCGAATCCTGTGGTTGT+AGG 0.472230 8.2:+74838135 MS.gene011293:CDS
CCTACACCCAGATTGATTGA+TGG 0.472241 8.2:+74841402 MS.gene011293:CDS
CGGATCATGTTGATGTTGAT+GGG 0.473173 8.2:+74838553 MS.gene011293:CDS
GAAGGTTGATTATTTGGCTA+AGG 0.473509 8.2:+74838593 MS.gene011293:CDS
TGGAGCTCCAGTCATGTTTG+TGG 0.474210 8.2:+74841871 MS.gene011293:CDS
CCAACAAATAAGACAAGGTC+AGG 0.474859 8.2:-74841200 None:intergenic
TTTGTTGGAGTTAATGGAGT+TGG 0.477015 8.2:+74840021 MS.gene011293:CDS
TAAGGTAGATCAGCTTTGAC+AGG 0.479756 8.2:-74841172 None:intergenic
AATTCTGCATCTGCTTTATG+TGG 0.482797 8.2:+74837981 MS.gene011293:CDS
CTTATTTGTTGGAGAAGCAC+TGG 0.484654 8.2:+74841211 MS.gene011293:CDS
AAGGATATCTTCCACAGTGC+AGG 0.486091 8.2:+74839787 MS.gene011293:CDS
GAGCTGCTTATTCTCTCAAA+TGG 0.492519 8.2:+74837911 MS.gene011293:CDS
ATGGGGATGCTGATAAGGAT+AGG 0.493111 8.2:+74838571 MS.gene011293:CDS
GCTTGTGATACATTTCGATC+AGG 0.496091 8.2:+74840216 MS.gene011293:CDS
AGACAAGGTCAGGATTGTTA+AGG 0.496116 8.2:-74841190 None:intergenic
GTTAGGAATAAAGGCGGGAA+TGG 0.496788 8.2:+74838429 MS.gene011293:CDS
TGTAAATAGGCTCCAGAAGA+AGG 0.499134 8.2:+74838407 MS.gene011293:CDS
GCGTTCTATTGACATATTGA+GGG 0.507989 8.2:+74839954 MS.gene011293:CDS
CTATTCCCACCTACAACCAC+AGG 0.514029 8.2:-74838144 None:intergenic
TCAGTGGCAGCAAGTCTTGA+AGG 0.514318 8.2:+74839743 MS.gene011293:CDS
CCAGTCATGTTTGTGGGATG+CGG 0.515363 8.2:+74841878 MS.gene011293:CDS
GAAATTGGTAACGCTTTGAA+AGG 0.518123 8.2:+74837808 MS.gene011293:CDS
GATTATTTGGCTAAGGAACA+AGG 0.518974 8.2:+74838600 MS.gene011293:CDS
TCAGATCCCTATATTTGAGA+AGG 0.520704 8.2:+74840357 MS.gene011293:intron
CTACACCCAGATTGATTGAT+GGG 0.521118 8.2:+74841403 MS.gene011293:CDS
GGATCTGACGGGAAGAAGAA+TGG 0.524281 8.2:+74838195 MS.gene011293:CDS
CAGGAGCTGTTGAGCAGTTG+CGG 0.524608 8.2:+74840235 MS.gene011293:CDS
AAAATCTCGATACACAGTTC+TGG 0.526147 8.2:-74838055 None:intergenic
GGAGCTCCAGTCATGTTTGT+GGG 0.528002 8.2:+74841872 MS.gene011293:CDS
CAGATCCCTATATTTGAGAA+GGG 0.528857 8.2:+74840358 MS.gene011293:intron
GACGTTGAGTTTCTTGAGGT+CGG 0.531116 8.2:-74841912 None:intergenic
GGAACAAGGGGAGAGTATGA+TGG 0.532793 8.2:+74838614 MS.gene011293:CDS
AAGCAATTCAGGAAGCTTCA+CGG 0.533244 8.2:+74840413 MS.gene011293:CDS
GGCGGCAATGGAAGACGCAC+TGG 0.534128 8.2:+74839912 MS.gene011293:intron
CGACACAGCTGGTCGTATGC+AGG 0.535402 8.2:+74840459 MS.gene011293:CDS
GGGAAGAAGAATGGCAGTGC+TGG 0.539935 8.2:+74838204 MS.gene011293:CDS
ATTCAGGAAGCTTCACGGAA+TGG 0.540152 8.2:+74840418 MS.gene011293:CDS
TCGAATCCTGTGGTTGTAGG+TGG 0.540946 8.2:+74838138 MS.gene011293:CDS
TGGAAGGGAGATGGATCTGA+CGG 0.542887 8.2:+74838183 MS.gene011293:CDS
TGTGCTCAGTATTGCTGGGA+AGG 0.545968 8.2:+74839498 MS.gene011293:intron
CAATTTCATTGCATGACCAA+AGG 0.546136 8.2:-74837792 None:intergenic
GATTCGATCTTGTCTTCTAG+AGG 0.546611 8.2:+74837849 MS.gene011293:CDS
TGTCTTCTAGAGGAGCGATC+TGG 0.547527 8.2:+74837859 MS.gene011293:CDS
ATCTCGATACACAGTTCTGG+TGG 0.553576 8.2:-74838052 None:intergenic
AAAATCTACTAATCTTGCTA+AGG 0.553829 8.2:+74840044 MS.gene011293:CDS
GCAAGTTTACCTCTGGAACA+TGG 0.554471 8.2:-74838757 None:intergenic
CAGGTGACATGGAAGGGAGA+TGG 0.559417 8.2:+74838174 MS.gene011293:CDS
CCGCATCCCACAAACATGAC+TGG 0.559796 8.2:-74841878 None:intergenic
ACCAGCTTTGAAAGCTCTGA+AGG 0.559926 8.2:+74839546 MS.gene011293:CDS
TTGAGAGAATAAGCAGCTCC+AGG 0.560375 8.2:-74837907 None:intergenic
AAACAGCAGGTGACATGGAA+GGG 0.561061 8.2:+74838168 MS.gene011293:CDS
AAGAAGAATGGCAGTGCTGG+TGG 0.566063 8.2:+74838207 MS.gene011293:CDS
AAGAATGGCAGTGCTGGTGG+CGG 0.566224 8.2:+74838210 MS.gene011293:CDS
CAATCTGGGTGTAGGAGATG+TGG 0.570779 8.2:-74841394 None:intergenic
GGATGCTGATAAGGATAGGA+AGG 0.575386 8.2:+74838575 MS.gene011293:CDS
GCAGTTGAAGATTGAAGCTG+AGG 0.577891 8.2:+74838092 MS.gene011293:CDS
AAGATCCCATCAATCAATCT+GGG 0.579799 8.2:-74841408 None:intergenic
GGTTATAATTTGAGAAGTAA+CGG 0.581929 8.2:+74838321 MS.gene011293:CDS
CCATCAATCAATCTGGGTGT+AGG 0.581937 8.2:-74841402 None:intergenic
ACTTGACGTTGAGTTTCTTG+AGG 0.584980 8.2:-74841916 None:intergenic
GAAACAGCAGGTGACATGGA+AGG 0.585391 8.2:+74838167 MS.gene011293:CDS
TGAAGCTGAGGCACGTGCTG+AGG 0.588224 8.2:+74838104 MS.gene011293:CDS
TTTGTTGGAGAAGCACTGGT+TGG 0.588986 8.2:+74841215 MS.gene011293:CDS
GGCGGTGGTTTGAAGAATGA+TGG 0.590848 8.2:+74838234 MS.gene011293:CDS
ATAGGAAACAGCAGGTGACA+TGG 0.591167 8.2:+74838163 MS.gene011293:CDS
GTTATTGCGAATAACAGTAA+CGG 0.596419 8.2:+74838300 MS.gene011293:CDS
TGTTAAGGGTGAATTCTCGC+AGG 0.597191 8.2:+74838020 MS.gene011293:CDS
TTTAAGGAGCGTCTTCACAA+TGG 0.598414 8.2:-74841939 None:intergenic
TGCTTGTGCTCAGTATTGCT+GGG 0.598645 8.2:+74839494 MS.gene011293:intron
CGAATCCTGTGGTTGTAGGT+GGG 0.598863 8.2:+74838139 MS.gene011293:CDS
AGGTGGGAATAGGAAACAGC+AGG 0.600879 8.2:+74838155 MS.gene011293:CDS
ATTATTTGGCTAAGGAACAA+GGG 0.604812 8.2:+74838601 MS.gene011293:CDS
GGAAGGGAGATGGATCTGAC+GGG 0.606947 8.2:+74838184 MS.gene011293:CDS
TTCATGCTGCAAAAGAGCAA+AGG 0.608654 8.2:+74839980 MS.gene011293:CDS
ACACAATGTTAATGTCATGA+TGG 0.611925 8.2:+74840191 MS.gene011293:CDS
GAGAATGATAGTGTAAACAA+TGG 0.612652 8.2:+74838375 MS.gene011293:CDS
GATCGAATCAATGTATCGAT+CGG 0.615533 8.2:-74837835 None:intergenic
TTATTTGGCTAAGGAACAAG+GGG 0.618597 8.2:+74838602 MS.gene011293:CDS
GTTTGAAGAATGATGGTGAT+GGG 0.620460 8.2:+74838241 MS.gene011293:CDS
TGAGAAGCTATGTGAATCAG+TGG 0.623505 8.2:+74839727 MS.gene011293:CDS
GTTGTGCTAGTCGACACAGC+TGG 0.625758 8.2:+74840448 MS.gene011293:CDS
TCTTACAATTACGATGCACC+TGG 0.626789 8.2:+74837889 MS.gene011293:CDS
AAGGTAGATCAGCTTTGACA+GGG 0.628493 8.2:-74841171 None:intergenic
AACAGACGCTGTTGTAACCA+AGG 0.629920 8.2:+74838458 MS.gene011293:CDS
GAAGGCCAATTTGGAGAAGT+CGG 0.633774 8.2:+74839516 MS.gene011293:CDS
AGAAGGTTAGGAATAAAGGC+GGG 0.636662 8.2:+74838424 MS.gene011293:CDS
TCAGCTTTCAAAGTTCAACC+AGG 0.642481 8.2:+74841253 MS.gene011293:CDS
TCTCGATACACAGTTCTGGT+GGG 0.644564 8.2:-74838051 None:intergenic
TTTGAAGAAATCGAATCCTG+TGG 0.647958 8.2:+74838128 MS.gene011293:CDS
CTTCTCCAACAAATAAGACA+AGG 0.649892 8.2:-74841205 None:intergenic
TAGACTCATGACCAAGAATG+TGG 0.655583 8.2:+74839570 MS.gene011293:CDS
GGATCATGTTGATGTTGATG+GGG 0.663445 8.2:+74838554 MS.gene011293:CDS
TGTTATTCGCAATAACAGAA+CGG 0.664094 8.2:-74838293 None:intergenic
ATGATGATGATGATAATGCT+GGG 0.668563 8.2:+74838691 MS.gene011293:CDS
GGTTTGAAGAATGATGGTGA+TGG 0.671022 8.2:+74838240 MS.gene011293:CDS
AAGAAGGTTAGGAATAAAGG+CGG 0.679488 8.2:+74838423 MS.gene011293:CDS
AATATGTCAATAGAACGCCT+AGG 0.693947 8.2:-74839949 None:intergenic
TGGGTGTAGGAGATGTGGAG+AGG 0.699067 8.2:-74841389 None:intergenic
TAGAAACAAAACCTGCACTG+TGG 0.717352 8.2:-74839798 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTCAAATATAATTTAATAT+GGG + chr8.2:74841591-74841610 MS.gene011293:intron 10.0%
!! ATTGTATATAAATAAAAAGT+CGG - chr8.2:74839849-74839868 None:intergenic 10.0%
!! TAGTCAAATATAATTTAATA+TGG + chr8.2:74841590-74841609 MS.gene011293:intron 10.0%
!!! AAAAGTTTATTGATTTTATG+GGG + chr8.2:74840508-74840527 MS.gene011293:intron 15.0%
!!! AAAATCTAATTTAGTTTCAA+CGG - chr8.2:74838532-74838551 None:intergenic 15.0%
!!! CAAAAGTTTATTGATTTTAT+GGG + chr8.2:74840507-74840526 MS.gene011293:intron 15.0%
!!! TGAAACTAAATTAGATTTTA+CGG + chr8.2:74838533-74838552 MS.gene011293:CDS 15.0%
!! AAAAGGTAGTTAAGAAAAAT+AGG + chr8.2:74838490-74838509 MS.gene011293:CDS 20.0%
!! AAAGGTAGTTAAGAAAAATA+GGG + chr8.2:74838491-74838510 MS.gene011293:CDS 20.0%
!! ATGAATTAAATTGTTACTCT+TGG + chr8.2:74839226-74839245 MS.gene011293:intron 20.0%
!! TATTCTTGATGAACATTTAT+TGG + chr8.2:74841510-74841529 MS.gene011293:intron 20.0%
!! TCTATTCCAATAAACATAAA+AGG - chr8.2:74841000-74841019 None:intergenic 20.0%
!! TTGACTATATAACCAATTAA+TGG - chr8.2:74841577-74841596 None:intergenic 20.0%
!!! AAAAAAGTACAACCATTAAT+TGG + chr8.2:74841562-74841581 MS.gene011293:intron 20.0%
!!! AAACAATTTAAGTATTGTCA+AGG - chr8.2:74838981-74839000 None:intergenic 20.0%
!!! AAAGTTTATTGATTTTATGG+GGG + chr8.2:74840509-74840528 MS.gene011293:intron 20.0%
!!! AAATCTAATTTAGTTTCAAC+GGG - chr8.2:74838531-74838550 None:intergenic 20.0%
!!! AATGAACCTTTTATGTTTAT+TGG + chr8.2:74840991-74841010 MS.gene011293:intron 20.0%
!!! CATTTAACTTGTAATGATAT+TGG + chr8.2:74839131-74839150 MS.gene011293:intron 20.0%
!!! GCAAAAGTTTATTGATTTTA+TGG + chr8.2:74840506-74840525 MS.gene011293:intron 20.0%
!!! GGTTGTACTTTTTTAAAAAA+TGG - chr8.2:74841556-74841575 None:intergenic 20.0%
!!! TAATTATGTTTGATTTTGTC+AGG + chr8.2:74841817-74841836 MS.gene011293:intron 20.0%
!!! TTTTATGTTTATTGGAATAG+AGG + chr8.2:74840999-74841018 MS.gene011293:intron 20.0%
!!! TTTTTCTTAACTACCTTTTT+CGG - chr8.2:74838489-74838508 None:intergenic 20.0%
! AAAATCTACTAATCTTGCTA+AGG + chr8.2:74840044-74840063 MS.gene011293:CDS 25.0%
! AACTAGCAAAGACAAAATAA+AGG - chr8.2:74841715-74841734 None:intergenic 25.0%
! ACTAGCAAAGACAAAATAAA+GGG - chr8.2:74841714-74841733 None:intergenic 25.0%
! AGTTAAGAAAAATAGGGTTT+GGG + chr8.2:74838497-74838516 MS.gene011293:CDS 25.0%
! AGTTTCTGCAACAAAATAAA+TGG - chr8.2:74841363-74841382 None:intergenic 25.0%
! ATAAATACATACCACATTCT+TGG - chr8.2:74839584-74839603 None:intergenic 25.0%
! GGTTATAATTTGAGAAGTAA+CGG + chr8.2:74838321-74838340 MS.gene011293:CDS 25.0%
! GTTTCTGCAACAAAATAAAT+GGG - chr8.2:74841362-74841381 None:intergenic 25.0%
! TAAATTTATGGCTAAGCATT+TGG + chr8.2:74841486-74841505 MS.gene011293:intron 25.0%
! TAAGACATATGTGCATTATT+AGG + chr8.2:74839098-74839117 MS.gene011293:intron 25.0%
! TAATGATGATTTACTGCAAT+TGG + chr8.2:74839007-74839026 MS.gene011293:intron 25.0%
! TAGAATGAATGGATATTAAG+TGG + chr8.2:74840724-74840743 MS.gene011293:intron 25.0%
! TAGTTAAGAAAAATAGGGTT+TGG + chr8.2:74838496-74838515 MS.gene011293:CDS 25.0%
! TATGTAAAAATTCCGTATGT+CGG + chr8.2:74840097-74840116 MS.gene011293:intron 25.0%
! TGGAATTGCAAGTAAATTTA+TGG + chr8.2:74841474-74841493 MS.gene011293:intron 25.0%
! TTCGTTAGTCAATATAAAAC+CGG - chr8.2:74840595-74840614 None:intergenic 25.0%
!! AATACTATTGGTTATCTGTT+AGG + chr8.2:74840554-74840573 MS.gene011293:intron 25.0%
!! ACGTCTAAATTTTGTTCTAT+TGG + chr8.2:74839633-74839652 MS.gene011293:intron 25.0%
!! CTATTTCTTACGAATGAAAT+TGG - chr8.2:74841764-74841783 None:intergenic 25.0%
!!! ATTTATTTTGTTGCAGAAAC+TGG + chr8.2:74841362-74841381 MS.gene011293:intron 25.0%
!!! GTTTTATATTGACTAACGAA+AGG + chr8.2:74840595-74840614 MS.gene011293:intron 25.0%
!!! TGTGTTTTGAAAAATAATGC+AGG + chr8.2:74839891-74839910 MS.gene011293:intron 25.0%
!!! TTACTAACTTCTAGAATGAA+TGG + chr8.2:74840713-74840732 MS.gene011293:intron 25.0%
AAAGACAAAATAAAGGGAAG+GGG - chr8.2:74841708-74841727 None:intergenic 30.0%
AATAGAGGAAATTGTCATAG+AGG + chr8.2:74841014-74841033 MS.gene011293:intron 30.0%
AATTACACTGTAAACTTCCT+TGG + chr8.2:74839043-74839062 MS.gene011293:intron 30.0%
ACACAATGTTAATGTCATGA+TGG + chr8.2:74840191-74840210 MS.gene011293:CDS 30.0%
ACCAAATGACTCAATACTAT+TGG + chr8.2:74840542-74840561 MS.gene011293:intron 30.0%
AGTAACTGTTTCATTCAGTT+AGG - chr8.2:74840698-74840717 None:intergenic 30.0%
AGTGTTATATTTCCGTCAAT+TGG + chr8.2:74838919-74838938 MS.gene011293:intron 30.0%
ATGACTAAGATTTCAATCCA+AGG - chr8.2:74839063-74839082 None:intergenic 30.0%
ATGATAAGGTATGCAAATAC+TGG + chr8.2:74841454-74841473 MS.gene011293:intron 30.0%
ATGTAAAAATTCCGTATGTC+GGG + chr8.2:74840098-74840117 MS.gene011293:intron 30.0%
ATTAGAGGTTCCATTTCTTA+AGG - chr8.2:74840797-74840816 None:intergenic 30.0%
ATTATTTGGCTAAGGAACAA+GGG + chr8.2:74838601-74838620 MS.gene011293:CDS 30.0%
CAAAGACAAAATAAAGGGAA+GGG - chr8.2:74841709-74841728 None:intergenic 30.0%
CATAACCCTTCTCAAATATA+GGG - chr8.2:74840366-74840385 None:intergenic 30.0%
CCAACAAATACAACAACATA+TGG - chr8.2:74840009-74840028 None:intergenic 30.0%
CCATATGTTGTTGTATTTGT+TGG + chr8.2:74840006-74840025 MS.gene011293:CDS 30.0%
CTTGATGAACATTTATTGGT+TGG + chr8.2:74841514-74841533 MS.gene011293:intron 30.0%
CTTTCAATGGTTTACATATC+TGG + chr8.2:74841851-74841870 MS.gene011293:CDS 30.0%
GAATAAGTGCGTAAAAGATT+GGG - chr8.2:74840762-74840781 None:intergenic 30.0%
GGAAAATTGTCATAGATGAA+TGG + chr8.2:74841035-74841054 MS.gene011293:intron 30.0%
GTTATTGCGAATAACAGTAA+CGG + chr8.2:74838300-74838319 MS.gene011293:CDS 30.0%
TATAAAACCGGTATTAATCC+CGG - chr8.2:74840583-74840602 None:intergenic 30.0%
TCAAATATAGGGATCTGAAA+GGG - chr8.2:74840355-74840374 None:intergenic 30.0%
TCATAACCCTTCTCAAATAT+AGG - chr8.2:74840367-74840386 None:intergenic 30.0%
TGTTATTCGCAATAACAGAA+CGG - chr8.2:74838296-74838315 None:intergenic 30.0%
TTAGAGGTTCCATTTCTTAA+GGG - chr8.2:74840796-74840815 None:intergenic 30.0%
! AAAAACTGGCTTCATTTACA+AGG + chr8.2:74839768-74839787 MS.gene011293:CDS 30.0%
! ACCAATAGTATTGAGTCATT+TGG - chr8.2:74840546-74840565 None:intergenic 30.0%
! ATGATGATGATGATAATGCT+GGG + chr8.2:74838691-74838710 MS.gene011293:CDS 30.0%
! ATGGAGCTTTTGATGTAAAT+AGG + chr8.2:74838394-74838413 MS.gene011293:CDS 30.0%
! GACGGAAATATAACACTTTT+CGG - chr8.2:74838916-74838935 None:intergenic 30.0%
! GAGAATGATAGTGTAAACAA+TGG + chr8.2:74838375-74838394 MS.gene011293:CDS 30.0%
! GTTGTATTTGTTGGAGTTAA+TGG + chr8.2:74840015-74840034 MS.gene011293:CDS 30.0%
! GTTTGACACTATTGATGATA+AGG + chr8.2:74841440-74841459 MS.gene011293:CDS 30.0%
! TTGTCATAGATGAATGGTTT+TGG + chr8.2:74841041-74841060 MS.gene011293:intron 30.0%
!! GTTGGTAATGTTAGTGTAAA+TGG + chr8.2:74838348-74838367 MS.gene011293:CDS 30.0%
!! TATGTTTGATTTTGTCAGGT+GGG + chr8.2:74841821-74841840 MS.gene011293:intron 30.0%
!! TTATGTTTGATTTTGTCAGG+TGG + chr8.2:74841820-74841839 MS.gene011293:intron 30.0%
!!! GTTTTGAAAAATAATGCAGG+CGG + chr8.2:74839894-74839913 MS.gene011293:intron 30.0%
AAAATCTCGATACACAGTTC+TGG - chr8.2:74838058-74838077 None:intergenic 35.0%
AAATATAGGGATCTGAAAGG+GGG - chr8.2:74840353-74840372 None:intergenic 35.0%
AACAGAATCCCCTTAAGAAA+TGG + chr8.2:74840784-74840803 MS.gene011293:intron 35.0%
AACTGTTTCATTCAGTTAGG+CGG - chr8.2:74840695-74840714 None:intergenic 35.0%
AAGAAGGTTAGGAATAAAGG+CGG + chr8.2:74838423-74838442 MS.gene011293:CDS 35.0%
AAGACAAAATAAAGGGAAGG+GGG - chr8.2:74841707-74841726 None:intergenic 35.0%
AAGATCCCATCAATCAATCT+GGG - chr8.2:74841411-74841430 None:intergenic 35.0%
AAGCCTGATGCTAAAAAGAA+GGG + chr8.2:74838723-74838742 MS.gene011293:CDS 35.0%
AAGTCTTGAAGGCAAAAAAC+TGG + chr8.2:74839754-74839773 MS.gene011293:CDS 35.0%
AATATGTCAATAGAACGCCT+AGG - chr8.2:74839952-74839971 None:intergenic 35.0%
AATTCTGCATCTGCTTTATG+TGG + chr8.2:74837981-74838000 MS.gene011293:CDS 35.0%
AGTAGCAGATCAAGGTTATT+TGG - chr8.2:74839373-74839392 None:intergenic 35.0%
ATAAAACCGGTATTAATCCC+GGG - chr8.2:74840582-74840601 None:intergenic 35.0%
ATCCTCAACATCATTAGATG+TGG + chr8.2:74839602-74839621 MS.gene011293:intron 35.0%
ATCTGAAAGGGGGAATTATA+AGG - chr8.2:74840343-74840362 None:intergenic 35.0%
ATTCATTCGATGCTTTCTTG+TGG - chr8.2:74841643-74841662 None:intergenic 35.0%
ATTCGTTTGAAAGTCAGGAA+AGG + chr8.2:74839155-74839174 MS.gene011293:intron 35.0%
CAAATATAGGGATCTGAAAG+GGG - chr8.2:74840354-74840373 None:intergenic 35.0%
CAATCAAAGCAACATGTAAG+AGG - chr8.2:74839266-74839285 None:intergenic 35.0%
CAATTTCATTGCATGACCAA+AGG - chr8.2:74837795-74837814 None:intergenic 35.0%
CAGAAGAAGGTTAGGAATAA+AGG + chr8.2:74838420-74838439 MS.gene011293:CDS 35.0%
CAGACAACAAATCCAATTGA+CGG - chr8.2:74838934-74838953 None:intergenic 35.0%
CAGATCCCTATATTTGAGAA+GGG + chr8.2:74840358-74840377 MS.gene011293:intron 35.0%
CTATCACTGTTTCAGTTTCT+AGG + chr8.2:74840941-74840960 MS.gene011293:intron 35.0%
CTCAAATATAGGGATCTGAA+AGG - chr8.2:74840356-74840375 None:intergenic 35.0%
CTGCATAATCACACAGAAAA+TGG - chr8.2:74840151-74840170 None:intergenic 35.0%
CTTCTCCAACAAATAAGACA+AGG - chr8.2:74841208-74841227 None:intergenic 35.0%
CTTTATTCCTAACCTTCTTC+TGG - chr8.2:74838422-74838441 None:intergenic 35.0%
CTTTGGTCATGCAATGAAAT+TGG + chr8.2:74837793-74837812 MS.gene011293:CDS 35.0%
GAAAATGGAATATCTCCTTC+AGG - chr8.2:74840136-74840155 None:intergenic 35.0%
GATTATTTGGCTAAGGAACA+AGG + chr8.2:74838600-74838619 MS.gene011293:CDS 35.0%
GCAAAGACAAAATAAAGGGA+AGG - chr8.2:74841710-74841729 None:intergenic 35.0%
GCACATATGTCTTAAAGCAA+AGG - chr8.2:74839092-74839111 None:intergenic 35.0%
GCGTTCTATTGACATATTGA+GGG + chr8.2:74839954-74839973 MS.gene011293:CDS 35.0%
GGAATAAGTGCGTAAAAGAT+TGG - chr8.2:74840763-74840782 None:intergenic 35.0%
GGGTTCAATAACAGACATAT+GGG - chr8.2:74841342-74841361 None:intergenic 35.0%
TACTAATCTTGCTAAGGTGA+AGG + chr8.2:74840050-74840069 MS.gene011293:intron 35.0%
TAGAGGTTCCATTTCTTAAG+GGG - chr8.2:74840795-74840814 None:intergenic 35.0%
TCAAGCAACACAACATCAAT+CGG - chr8.2:74838889-74838908 None:intergenic 35.0%
TCAATCAAAGTAGCAGATCA+AGG - chr8.2:74839381-74839400 None:intergenic 35.0%
TCAGATCCCTATATTTGAGA+AGG + chr8.2:74840357-74840376 MS.gene011293:intron 35.0%
TCATGGCCCATTTCATTATT+GGG + chr8.2:74840908-74840927 MS.gene011293:intron 35.0%
TGAATATATTGCACCTAACC+TGG - chr8.2:74841274-74841293 None:intergenic 35.0%
TGAGATGGAAACAAAATCAG+CGG - chr8.2:74841671-74841690 None:intergenic 35.0%
TGATGATTTACTGCAATTGG+TGG + chr8.2:74839010-74839029 MS.gene011293:intron 35.0%
TGGGTTCAATAACAGACATA+TGG - chr8.2:74841343-74841362 None:intergenic 35.0%
TGTGCATTATTAGGATGTCA+AGG + chr8.2:74839107-74839126 MS.gene011293:intron 35.0%
TTATTTGGCTAAGGAACAAG+GGG + chr8.2:74838602-74838621 MS.gene011293:CDS 35.0%
TTCATCTTACATGTCACTGA+TGG + chr8.2:74841119-74841138 MS.gene011293:intron 35.0%
TTCATGGCCCATTTCATTAT+TGG + chr8.2:74840907-74840926 MS.gene011293:intron 35.0%
TTGGTATTCGTTTGAAAGTC+AGG + chr8.2:74839150-74839169 MS.gene011293:intron 35.0%
TTTCAAAGTTCAACCAGGTT+AGG + chr8.2:74841258-74841277 MS.gene011293:intron 35.0%
TTTCTTAAGGGGATTCTGTT+AGG - chr8.2:74840784-74840803 None:intergenic 35.0%
TTTGAAGAAATCGAATCCTG+TGG + chr8.2:74838128-74838147 MS.gene011293:CDS 35.0%
TTTGTTGGAGTTAATGGAGT+TGG + chr8.2:74840021-74840040 MS.gene011293:CDS 35.0%
! AGCTTTGTCCAACTACAATT+GGG + chr8.2:74841299-74841318 MS.gene011293:intron 35.0%
! CATTTTCTGTGTGATTATGC+AGG + chr8.2:74840149-74840168 MS.gene011293:intron 35.0%
! GAAGGTTGATTATTTGGCTA+AGG + chr8.2:74838593-74838612 MS.gene011293:CDS 35.0%
! GATCGAATCAATGTATCGAT+CGG - chr8.2:74837838-74837857 None:intergenic 35.0%
! GATGATGATGATGATAATGC+TGG + chr8.2:74838690-74838709 MS.gene011293:CDS 35.0%
! GGATAGGAAGGTTGATTATT+TGG + chr8.2:74838587-74838606 MS.gene011293:CDS 35.0%
! GTTTGAAGAATGATGGTGAT+GGG + chr8.2:74838241-74838260 MS.gene011293:CDS 35.0%
! TGAACATTTATTGGTTGGCT+AGG + chr8.2:74841519-74841538 MS.gene011293:intron 35.0%
! TGGACTTTTCACAATGATCT+AGG + chr8.2:74837931-74837950 MS.gene011293:CDS 35.0%
!! AATGATGGTGATGGGAAAAA+TGG + chr8.2:74838249-74838268 MS.gene011293:CDS 35.0%
!! ATGATGGTGATGGGAAAAAT+GGG + chr8.2:74838250-74838269 MS.gene011293:CDS 35.0%
!! GAAATTGGTAACGCTTTGAA+AGG + chr8.2:74837808-74837827 MS.gene011293:CDS 35.0%
!! TAGCTTTGTCCAACTACAAT+TGG + chr8.2:74841298-74841317 MS.gene011293:intron 35.0%
!! TTACATTCTGTGTCACTTGT+AGG + chr8.2:74839691-74839710 MS.gene011293:intron 35.0%
!!! CAGTTACTGATTTTCACAAG+AGG + chr8.2:74837760-74837779 MS.gene011293:CDS 35.0%
!!! GATTTTTAGTAGTGACAGTG+AGG + chr8.2:74838647-74838666 MS.gene011293:CDS 35.0%
!!! TGGTTCGTATTTTAACTCCT+AGG + chr8.2:74839932-74839951 MS.gene011293:CDS 35.0%
!!! TTACTGATTTTCACAAGAGG+AGG + chr8.2:74837763-74837782 MS.gene011293:CDS 35.0%
AAAAATAATGCAGGCGGCAA+TGG + chr8.2:74839900-74839919 MS.gene011293:intron 40.0%
AAATCGAATCCTGTGGTTGT+AGG + chr8.2:74838135-74838154 MS.gene011293:CDS 40.0%
AAATTGAGCCACGCTCTTAT+AGG + chr8.2:74840618-74840637 MS.gene011293:intron 40.0%
AACATCAATCGGATTCTACG+AGG - chr8.2:74838878-74838897 None:intergenic 40.0%
AAGCAATTCAGGAAGCTTCA+CGG + chr8.2:74840413-74840432 MS.gene011293:CDS 40.0%
AAGTGCGTAAAAGATTGGGA+GGG - chr8.2:74840758-74840777 None:intergenic 40.0%
AAGTTCAGCAAGTTTACCTC+TGG - chr8.2:74838767-74838786 None:intergenic 40.0%
ACGGATCATGTTGATGTTGA+TGG + chr8.2:74838552-74838571 MS.gene011293:CDS 40.0%
ACTTGACGTTGAGTTTCTTG+AGG - chr8.2:74841919-74841938 None:intergenic 40.0%
AGAAGACTTAAGAGAGCTGA+TGG - chr8.2:74840833-74840852 None:intergenic 40.0%
AGAAGGTTAGGAATAAAGGC+GGG + chr8.2:74838424-74838443 MS.gene011293:CDS 40.0%
AGACAAGGTCAGGATTGTTA+AGG - chr8.2:74841193-74841212 None:intergenic 40.0%
AGTAGGATATTCCTCTCTGA+AGG - chr8.2:74840672-74840691 None:intergenic 40.0%
CAAGAGGAGGATTAATCCTT+TGG + chr8.2:74837776-74837795 MS.gene011293:CDS 40.0%
CAAGATCCCATCAATCAATC+TGG - chr8.2:74841412-74841431 None:intergenic 40.0%
CAAGCCTGATGCTAAAAAGA+AGG + chr8.2:74838722-74838741 MS.gene011293:CDS 40.0%
CACCACATCTAATGATGTTG+AGG - chr8.2:74839607-74839626 None:intergenic 40.0%
CAGTGACATGTAAGATGAAG+TGG - chr8.2:74841118-74841137 None:intergenic 40.0%
CCAACAAATAAGACAAGGTC+AGG - chr8.2:74841203-74841222 None:intergenic 40.0%
CGGATCATGTTGATGTTGAT+GGG + chr8.2:74838553-74838572 MS.gene011293:CDS 40.0%
CTACACCCAGATTGATTGAT+GGG + chr8.2:74841403-74841422 MS.gene011293:CDS 40.0%
CTCAACATCATTAGATGTGG+TGG + chr8.2:74839605-74839624 MS.gene011293:intron 40.0%
CTGATGCTAAAAAGAAGGGT+TGG + chr8.2:74838727-74838746 MS.gene011293:CDS 40.0%
CTGGAGCCCAATAATGAAAT+GGG - chr8.2:74840917-74840936 None:intergenic 40.0%
GAGCTGCTTATTCTCTCAAA+TGG + chr8.2:74837911-74837930 MS.gene011293:CDS 40.0%
GATTCGATCTTGTCTTCTAG+AGG + chr8.2:74837849-74837868 MS.gene011293:CDS 40.0%
GCTTGTGATACATTTCGATC+AGG + chr8.2:74840216-74840235 MS.gene011293:CDS 40.0%
GGATCATGTTGATGTTGATG+GGG + chr8.2:74838554-74838573 MS.gene011293:CDS 40.0%
GGCGTTCTATTGACATATTG+AGG + chr8.2:74839953-74839972 MS.gene011293:CDS 40.0%
GTACTATCTCTTGACAGCAA+AGG - chr8.2:74840967-74840986 None:intergenic 40.0%
TAAAAAGCAAGCCCGACATA+CGG - chr8.2:74840112-74840131 None:intergenic 40.0%
TAAGTGCGTAAAAGATTGGG+AGG - chr8.2:74840759-74840778 None:intergenic 40.0%
TAATGAAATGGGCCATGAAG+AGG - chr8.2:74840906-74840925 None:intergenic 40.0%
TAGAAACAAAACCTGCACTG+TGG - chr8.2:74839801-74839820 None:intergenic 40.0%
TAGACTCATGACCAAGAATG+TGG + chr8.2:74839570-74839589 MS.gene011293:CDS 40.0%
TCACGAGGAAAATGGAAACA+GGG - chr8.2:74839315-74839334 None:intergenic 40.0%
TCAGCTTTCAAAGTTCAACC+AGG + chr8.2:74841253-74841272 MS.gene011293:CDS 40.0%
TCTTACAATTACGATGCACC+TGG + chr8.2:74837889-74837908 MS.gene011293:CDS 40.0%
TGAAAAAGATCCTGCTGTTG+TGG + chr8.2:74840384-74840403 MS.gene011293:CDS 40.0%
TGAGAAGCTATGTGAATCAG+TGG + chr8.2:74839727-74839746 MS.gene011293:CDS 40.0%
TGATTATGCAGGTTGCTTAC+TGG + chr8.2:74840160-74840179 MS.gene011293:intron 40.0%
TGTAAATAGGCTCCAGAAGA+AGG + chr8.2:74838407-74838426 MS.gene011293:CDS 40.0%
TGTGGCAAAAGAAGCAATTC+AGG + chr8.2:74840402-74840421 MS.gene011293:CDS 40.0%
TTCATGCTGCAAAAGAGCAA+AGG + chr8.2:74839980-74839999 MS.gene011293:CDS 40.0%
TTGGTTATCTGTTAGGAACC+CGG + chr8.2:74840561-74840580 MS.gene011293:intron 40.0%
! AAGGTAGATCAGCTTTGACA+GGG - chr8.2:74841174-74841193 None:intergenic 40.0%
! ACATGTCACTGATGGTTTTC+AGG + chr8.2:74841127-74841146 MS.gene011293:intron 40.0%
! CATTTATTGGTTGGCTAGGA+CGG + chr8.2:74841523-74841542 MS.gene011293:intron 40.0%
! CTTATTTGTTGGAGAAGCAC+TGG + chr8.2:74841211-74841230 MS.gene011293:CDS 40.0%
! GATTTGCTTGCTGCTGTTAA+GGG + chr8.2:74838006-74838025 MS.gene011293:CDS 40.0%
! GGTTTGAAGAATGATGGTGA+TGG + chr8.2:74838240-74838259 MS.gene011293:CDS 40.0%
! TAAGGTAGATCAGCTTTGAC+AGG - chr8.2:74841175-74841194 None:intergenic 40.0%
! TCTGGAGCCCAATAATGAAA+TGG - chr8.2:74840918-74840937 None:intergenic 40.0%
! TGTTTCCATTTTCCTCGTGA+CGG + chr8.2:74839315-74839334 MS.gene011293:intron 40.0%
!! CAACCCTTCTTTTTAGCATC+AGG - chr8.2:74838729-74838748 None:intergenic 40.0%
!! CCTGACCTTGTCTTATTTGT+TGG + chr8.2:74841200-74841219 MS.gene011293:CDS 40.0%
!! TAAAAGATTGGGAGGGTATC+TGG - chr8.2:74840751-74840770 None:intergenic 40.0%
!! TGATTTGCTTGCTGCTGTTA+AGG + chr8.2:74838005-74838024 MS.gene011293:CDS 40.0%
!! TTGAGAAGTAACGGTGTTGT+TGG + chr8.2:74838330-74838349 MS.gene011293:CDS 40.0%
!! TTTAAGGAGCGTCTTCACAA+TGG - chr8.2:74841942-74841961 None:intergenic 40.0%
AAACAGCAGGTGACATGGAA+GGG + chr8.2:74838168-74838187 MS.gene011293:CDS 45.0%
AACAGACGCTGTTGTAACCA+AGG + chr8.2:74838458-74838477 MS.gene011293:CDS 45.0%
AAGGATATCTTCCACAGTGC+AGG + chr8.2:74839787-74839806 MS.gene011293:CDS 45.0%
AGAGCTGATGGTTAATGACG+TGG - chr8.2:74840821-74840840 None:intergenic 45.0%
AGAGTATACCCTCCAAGGTT+TGG + chr8.2:74840853-74840872 MS.gene011293:intron 45.0%
AGTCGGCATCAAATGTCGAT+AGG - chr8.2:74839832-74839851 None:intergenic 45.0%
ATAGGAAACAGCAGGTGACA+TGG + chr8.2:74838163-74838182 MS.gene011293:CDS 45.0%
ATAGGCTCCAGAAGAAGGTT+AGG + chr8.2:74838412-74838431 MS.gene011293:CDS 45.0%
ATGCTTGTGCTCAGTATTGC+TGG + chr8.2:74839493-74839512 MS.gene011293:intron 45.0%
ATGGGGATGCTGATAAGGAT+AGG + chr8.2:74838571-74838590 MS.gene011293:CDS 45.0%
ATTCAGGAAGCTTCACGGAA+TGG + chr8.2:74840418-74840437 MS.gene011293:CDS 45.0%
CAAGTCCGACTTCTCCAAAT+TGG - chr8.2:74839524-74839543 None:intergenic 45.0%
CAATTTGGAGAAGTCGGACT+TGG + chr8.2:74839522-74839541 MS.gene011293:CDS 45.0%
CCACAATCTGATCCTCTTCA+TGG + chr8.2:74840891-74840910 MS.gene011293:intron 45.0%
CCATCAATCAATCTGGGTGT+AGG - chr8.2:74841405-74841424 None:intergenic 45.0%
CCATGAAGAGGATCAGATTG+TGG - chr8.2:74840894-74840913 None:intergenic 45.0%
CCTACACCCAGATTGATTGA+TGG + chr8.2:74841402-74841421 MS.gene011293:CDS 45.0%
CTGAAACAGTGATAGAGCTC+TGG - chr8.2:74840936-74840955 None:intergenic 45.0%
GAAGGCCAATTTGGAGAAGT+CGG + chr8.2:74839516-74839535 MS.gene011293:CDS 45.0%
GACGAAGACCCAATTGTAGT+TGG - chr8.2:74841310-74841329 None:intergenic 45.0%
GACGTTGAGTTTCTTGAGGT+CGG - chr8.2:74841915-74841934 None:intergenic 45.0%
GAGGATCAGATTGTGGATAC+TGG - chr8.2:74840887-74840906 None:intergenic 45.0%
GAGTATACCCTCCAAGGTTT+GGG + chr8.2:74840854-74840873 MS.gene011293:intron 45.0%
GAGTTTCTTGAGGTCGGTAT+AGG - chr8.2:74841909-74841928 None:intergenic 45.0%
GCAGTTGAAGATTGAAGCTG+AGG + chr8.2:74838092-74838111 MS.gene011293:CDS 45.0%
GGATGCTGATAAGGATAGGA+AGG + chr8.2:74838575-74838594 MS.gene011293:CDS 45.0%
GGTTAATGACGTGGCATTAG+AGG - chr8.2:74840812-74840831 None:intergenic 45.0%
GTCACGAGGAAAATGGAAAC+AGG - chr8.2:74839316-74839335 None:intergenic 45.0%
GTCGGCATCAAATGTCGATA+GGG - chr8.2:74839831-74839850 None:intergenic 45.0%
GTTAGGAATAAAGGCGGGAA+TGG + chr8.2:74838429-74838448 MS.gene011293:CDS 45.0%
TAGGAACCCGGGATTAATAC+CGG + chr8.2:74840573-74840592 MS.gene011293:intron 45.0%
TATTGCTGGGAAGGCCAATT+TGG + chr8.2:74839507-74839526 MS.gene011293:CDS 45.0%
TCCTTCAGAGCTTTCAAAGC+TGG - chr8.2:74839550-74839569 None:intergenic 45.0%
TGCTTGTGCTCAGTATTGCT+GGG + chr8.2:74839494-74839513 MS.gene011293:intron 45.0%
TGGTTATCTGTTAGGAACCC+GGG + chr8.2:74840562-74840581 MS.gene011293:intron 45.0%
TGTTAAGGGTGAATTCTCGC+AGG + chr8.2:74838020-74838039 MS.gene011293:CDS 45.0%
TTCATTCAGTTAGGCGGAGT+AGG - chr8.2:74840689-74840708 None:intergenic 45.0%
TTGAGAGAATAAGCAGCTCC+AGG - chr8.2:74837910-74837929 None:intergenic 45.0%
TTTGACAGGGCTCTCATCAA+TGG - chr8.2:74841161-74841180 None:intergenic 45.0%
! ATCTCGATACACAGTTCTGG+TGG - chr8.2:74838055-74838074 None:intergenic 45.0%
! GGTTTTCATCCATGTTCCAG+AGG + chr8.2:74838748-74838767 MS.gene011293:CDS 45.0%
! GTTGCTTTCCTATAAGAGCG+TGG - chr8.2:74840629-74840648 None:intergenic 45.0%
! TCTCGATACACAGTTCTGGT+GGG - chr8.2:74838054-74838073 None:intergenic 45.0%
! TGTTGATGGGGATGCTGATA+AGG + chr8.2:74838566-74838585 MS.gene011293:CDS 45.0%
!! ACCAGCTTTGAAAGCTCTGA+AGG + chr8.2:74839546-74839565 MS.gene011293:CDS 45.0%
!! CTTCTAGAGTATACCCTCCA+AGG + chr8.2:74840848-74840867 MS.gene011293:intron 45.0%
!! GAAAGTCAGGAAAGGTGTTG+AGG + chr8.2:74839163-74839182 MS.gene011293:intron 45.0%
!! GCAAGTTTACCTCTGGAACA+TGG - chr8.2:74838760-74838779 None:intergenic 45.0%
!! TTTGTTGGAGAAGCACTGGT+TGG + chr8.2:74841215-74841234 MS.gene011293:CDS 45.0%
!!! GGGCTTGCTTTTTAACCTGA+AGG + chr8.2:74840118-74840137 MS.gene011293:intron 45.0%
AACCAAGGCTGAGCCGAAAA+AGG + chr8.2:74838473-74838492 MS.gene011293:CDS 50.0%
AGGTGGGAATAGGAAACAGC+AGG + chr8.2:74838155-74838174 MS.gene011293:CDS 50.0%
CAATCTGGGTGTAGGAGATG+TGG - chr8.2:74841397-74841416 None:intergenic 50.0%
CCAGTCATGTTTGTGGGATG+CGG + chr8.2:74841878-74841897 MS.gene011293:CDS 50.0%
CGAATCCTGTGGTTGTAGGT+GGG + chr8.2:74838139-74838158 MS.gene011293:CDS 50.0%
CGATACCGTCACGAGGAAAA+TGG - chr8.2:74839323-74839342 None:intergenic 50.0%
CTATTCCCACCTACAACCAC+AGG - chr8.2:74838147-74838166 None:intergenic 50.0%
CTGTGGTTGTAGGTGGGAAT+AGG + chr8.2:74838145-74838164 MS.gene011293:CDS 50.0%
GAAACAGCAGGTGACATGGA+AGG + chr8.2:74838167-74838186 MS.gene011293:CDS 50.0%
GGAAGCTTCACGGAATGGTT+CGG + chr8.2:74840423-74840442 MS.gene011293:CDS 50.0%
GGAGCTCCAGTCATGTTTGT+GGG + chr8.2:74841872-74841891 MS.gene011293:CDS 50.0%
GGATCTGACGGGAAGAAGAA+TGG + chr8.2:74838195-74838214 MS.gene011293:CDS 50.0%
GGCGAAATACATGGGTGAGA+TGG - chr8.2:74841686-74841705 None:intergenic 50.0%
GGCGGTGGTTTGAAGAATGA+TGG + chr8.2:74838234-74838253 MS.gene011293:CDS 50.0%
TCAGTGGCAGCAAGTCTTGA+AGG + chr8.2:74839743-74839762 MS.gene011293:CDS 50.0%
TCGAATCCTGTGGTTGTAGG+TGG + chr8.2:74838138-74838157 MS.gene011293:CDS 50.0%
TGGAAGGGAGATGGATCTGA+CGG + chr8.2:74838183-74838202 MS.gene011293:CDS 50.0%
TGGAGCTCCAGTCATGTTTG+TGG + chr8.2:74841871-74841890 MS.gene011293:CDS 50.0%
TGTGCTCAGTATTGCTGGGA+AGG + chr8.2:74839498-74839517 MS.gene011293:intron 50.0%
! AAGAAGAATGGCAGTGCTGG+TGG + chr8.2:74838207-74838226 MS.gene011293:CDS 50.0%
! ATTCCTCTCTGAAGGAGCCT+TGG - chr8.2:74840664-74840683 None:intergenic 50.0%
! GCTTCTTTTGCCACAACAGC+AGG - chr8.2:74840397-74840416 None:intergenic 50.0%
! GGAACAAGGGGAGAGTATGA+TGG + chr8.2:74838614-74838633 MS.gene011293:CDS 50.0%
! GTTGAGGTCAGGGGCATATA+TGG + chr8.2:74839179-74839198 MS.gene011293:intron 50.0%
! TGTCTTCTAGAGGAGCGATC+TGG + chr8.2:74837859-74837878 MS.gene011293:CDS 50.0%
!! AGGAAAGGTGTTGAGGTCAG+GGG + chr8.2:74839170-74839189 MS.gene011293:intron 50.0%
!! CAGGAAAGGTGTTGAGGTCA+GGG + chr8.2:74839169-74839188 MS.gene011293:intron 50.0%
!! TCAGGAAAGGTGTTGAGGTC+AGG + chr8.2:74839168-74839187 MS.gene011293:intron 50.0%
!! TCTGTGTCACTTGTAGGCTG+AGG + chr8.2:74839697-74839716 MS.gene011293:intron 50.0%
!!! TACCTTTTTCGGCTCAGCCT+TGG - chr8.2:74838478-74838497 None:intergenic 50.0%
AGGGAAGGGGGCGAAATACA+TGG - chr8.2:74841695-74841714 None:intergenic 55.0%
CAGGAGCTGTTGAGCAGTTG+CGG + chr8.2:74840235-74840254 MS.gene011293:CDS 55.0%
CAGGTGACATGGAAGGGAGA+TGG + chr8.2:74838174-74838193 MS.gene011293:CDS 55.0%
CCCACATCCCAAACCTTGGA+GGG - chr8.2:74840864-74840883 None:intergenic 55.0%
CCGCATCCCACAAACATGAC+TGG - chr8.2:74841881-74841900 None:intergenic 55.0%
GACTCATGCACGCAGACTTC+AGG + chr8.2:74840257-74840276 MS.gene011293:CDS 55.0%
GGAAGGGAGATGGATCTGAC+GGG + chr8.2:74838184-74838203 MS.gene011293:CDS 55.0%
GGGAAGAAGAATGGCAGTGC+TGG + chr8.2:74838204-74838223 MS.gene011293:CDS 55.0%
GGGAAGGGGGCGAAATACAT+GGG - chr8.2:74841694-74841713 None:intergenic 55.0%
GGTGGGAGCTGCACTTTCAA+TGG + chr8.2:74841838-74841857 MS.gene011293:intron 55.0%
GTTGTGCTAGTCGACACAGC+TGG + chr8.2:74840448-74840467 MS.gene011293:CDS 55.0%
TCCTCGTGACGGTATCGTCT+GGG + chr8.2:74839326-74839345 MS.gene011293:intron 55.0%
TGGGTGTAGGAGATGTGGAG+AGG - chr8.2:74841392-74841411 None:intergenic 55.0%
TTCCTCGTGACGGTATCGTC+TGG + chr8.2:74839325-74839344 MS.gene011293:intron 55.0%
! ACCCTCCAAGGTTTGGGATG+TGG + chr8.2:74840860-74840879 MS.gene011293:intron 55.0%
! CCCTCCAAGGTTTGGGATGT+GGG + chr8.2:74840861-74840880 MS.gene011293:intron 55.0%
!! AAGAATGGCAGTGCTGGTGG+CGG + chr8.2:74838210-74838229 MS.gene011293:CDS 55.0%
CCTCGTGACGGTATCGTCTG+GGG + chr8.2:74839327-74839346 MS.gene011293:intron 60.0%
CGACACAGCTGGTCGTATGC+AGG + chr8.2:74840459-74840478 MS.gene011293:CDS 60.0%
CTGGCCCACATCCCAAACCT+TGG - chr8.2:74840868-74840887 None:intergenic 60.0%
GAGCCAAGGCTCCTTCAGAG+AGG + chr8.2:74840658-74840677 MS.gene011293:intron 60.0%
GCAACAGACCACCTGAGCCA+AGG + chr8.2:74840644-74840663 MS.gene011293:intron 60.0%
GCCCACATCCCAAACCTTGG+AGG - chr8.2:74840865-74840884 None:intergenic 60.0%
TGAAGCTGAGGCACGTGCTG+AGG + chr8.2:74838104-74838123 MS.gene011293:CDS 60.0%
TGAAGGAGCCTTGGCTCAGG+TGG - chr8.2:74840655-74840674 None:intergenic 60.0%
! CTCTGAAGGAGCCTTGGCTC+AGG - chr8.2:74840658-74840677 None:intergenic 60.0%
CCCCAGACGATACCGTCACG+AGG - chr8.2:74839330-74839349 None:intergenic 65.0%
GGCGGCAATGGAAGACGCAC+TGG + chr8.2:74839912-74839931 MS.gene011293:intron 65.0%
!! AATGGCAGTGCTGGTGGCGG+CGG + chr8.2:74838213-74838232 MS.gene011293:CDS 65.0%
!!! AGTGCTGGTGGCGGCGGCGG+TGG + chr8.2:74838219-74838238 MS.gene011293:CDS 80.0%
!!! GGCAGTGCTGGTGGCGGCGG+CGG + chr8.2:74838216-74838235 MS.gene011293:CDS 80.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 74837751 74841964 74837751 ID=MS.gene011293
chr8.2 mRNA 74837751 74841964 74837751 ID=MS.gene011293.t1;Parent=MS.gene011293
chr8.2 exon 74837751 74838769 74837751 ID=MS.gene011293.t1.exon1;Parent=MS.gene011293.t1
chr8.2 CDS 74837751 74838769 74837751 ID=cds.MS.gene011293.t1;Parent=MS.gene011293.t1
chr8.2 exon 74839507 74839591 74839507 ID=MS.gene011293.t1.exon2;Parent=MS.gene011293.t1
chr8.2 CDS 74839507 74839591 74839507 ID=cds.MS.gene011293.t1;Parent=MS.gene011293.t1
chr8.2 exon 74839713 74839808 74839713 ID=MS.gene011293.t1.exon3;Parent=MS.gene011293.t1
chr8.2 CDS 74839713 74839808 74839713 ID=cds.MS.gene011293.t1;Parent=MS.gene011293.t1
chr8.2 exon 74839913 74840065 74839913 ID=MS.gene011293.t1.exon4;Parent=MS.gene011293.t1
chr8.2 CDS 74839913 74840065 74839913 ID=cds.MS.gene011293.t1;Parent=MS.gene011293.t1
chr8.2 exon 74840171 74840278 74840171 ID=MS.gene011293.t1.exon5;Parent=MS.gene011293.t1
chr8.2 CDS 74840171 74840278 74840171 ID=cds.MS.gene011293.t1;Parent=MS.gene011293.t1
chr8.2 exon 74840361 74840480 74840361 ID=MS.gene011293.t1.exon6;Parent=MS.gene011293.t1
chr8.2 CDS 74840361 74840480 74840361 ID=cds.MS.gene011293.t1;Parent=MS.gene011293.t1
chr8.2 exon 74841149 74841274 74841149 ID=MS.gene011293.t1.exon7;Parent=MS.gene011293.t1
chr8.2 CDS 74841149 74841274 74841149 ID=cds.MS.gene011293.t1;Parent=MS.gene011293.t1
chr8.2 exon 74841378 74841461 74841378 ID=MS.gene011293.t1.exon8;Parent=MS.gene011293.t1
chr8.2 CDS 74841378 74841461 74841378 ID=cds.MS.gene011293.t1;Parent=MS.gene011293.t1
chr8.2 exon 74841839 74841964 74841839 ID=MS.gene011293.t1.exon9;Parent=MS.gene011293.t1
chr8.2 CDS 74841839 74841964 74841839 ID=cds.MS.gene011293.t1;Parent=MS.gene011293.t1
Gene Sequence

>MS.gene011293

ATGTTAGAGCAGTTACTGATTTTCACAAGAGGAGGATTAATCCTTTGGTCATGCAATGAAATTGGTAACGCTTTGAAAGGATCGCCGATCGATACATTGATTCGATCTTGTCTTCTAGAGGAGCGATCTGGTGCTGCATCTTACAATTACGATGCACCTGGAGCTGCTTATTCTCTCAAATGGACTTTTCACAATGATCTAGGTCTTGTTTTCGTTGCTGTTTATCAGAGAATTCTGCATCTGCTTTATGTGGATGATTTGCTTGCTGCTGTTAAGGGTGAATTCTCGCAGGTTTATGATCCCACCAGAACTGTGTATCGAGATTTTGATCAGATTTTTAAGCAGTTGAAGATTGAAGCTGAGGCACGTGCTGAGGATTTGAAGAAATCGAATCCTGTGGTTGTAGGTGGGAATAGGAAACAGCAGGTGACATGGAAGGGAGATGGATCTGACGGGAAGAAGAATGGCAGTGCTGGTGGCGGCGGCGGTGGTTTGAAGAATGATGGTGATGGGAAAAATGGGAAGAAGAATTCTGATAATGACCGTTCTGTTATTGCGAATAACAGTAACGGTTATAATTTGAGAAGTAACGGTGTTGTTGGTAATGTTAGTGTAAATGGTAAAGAGAATGATAGTGTAAACAATGGAGCTTTTGATGTAAATAGGCTCCAGAAGAAGGTTAGGAATAAAGGCGGGAATGGAAAGAAAACAGACGCTGTTGTAACCAAGGCTGAGCCGAAAAAGGTAGTTAAGAAAAATAGGGTTTGGGATGACAAACCCGTTGAAACTAAATTAGATTTTACGGATCATGTTGATGTTGATGGGGATGCTGATAAGGATAGGAAGGTTGATTATTTGGCTAAGGAACAAGGGGAGAGTATGATGGATAAAGATGAGATTTTTAGTAGTGACAGTGAGGATGAAGATGATTATGATGATGATGATGATGATGATAATGCTGGGAAGAAGAGCAAGCCTGATGCTAAAAAGAAGGGTTGGTTTTCATCCATGTTCCAGAGGTAAACTTGCTGAACTTGATTAATTTGTTTTTTTTTTATTTTTTATTTTTTATATATAAATTGAAAAATTTGTTTGCTCTATTCAAATTTATGCTAAGTAGCTTACCTCGTAGAATCCGATTGATGTTGTGTTGCTTGAAATACCGAAAAGTGTTATATTTCCGTCAATTGGATTTGTTGTCTGTTGCATTGTTTCTAATCAATGATTCCTTGACAATACTTAAATTGTTTTAATTCTAATGATGATTTACTGCAATTGGTGGTAACAATAAAAATTACACTGTAAACTTCCTTGGATTGAAATCTTAGTCATAGTTGTCCTTTGCTTTAAGACATATGTGCATTATTAGGATGTCAAGGTCATTTAACTTGTAATGATATTGGTATTCGTTTGAAAGTCAGGAAAGGTGTTGAGGTCAGGGGCATATATGGATATGACAAAGCATAAATGAATGAATGAATTAAATTGTTACTCTTGGTCATAAATGAATTTCCTCTTACATGTTGCTTTGATTGTTGTTTTCTAAGATTTTGTGATGATGCCCTGTTTCCATTTTCCTCGTGACGGTATCGTCTGGGGTGAAATTTATTTTGTTGTTTCCAAATAACCTTGATCTGCTACTTTGATTGAATAATTTTACAACTTCACTTTGAAGTTATTACTATTAGTTTATTTCAATTTTCAGCTTTTCATTGAAATGACTACTAATGAAGTTTATTTACATGCTTGTGCTCAGTATTGCTGGGAAGGCCAATTTGGAGAAGTCGGACTTGGAACCAGCTTTGAAAGCTCTGAAGGATAGACTCATGACCAAGAATGTGGTATGTATTTATCCTCAACATCATTAGATGTGGTGGCTTCAACGTCTAAATTTTGTTCTATTGGCTACTTTTTGCTCTTCTTAAGCTATATAATATTTTTTACATTCTGTGTCACTTGTAGGCTGAGGAAATAGCTGAGAAGCTATGTGAATCAGTGGCAGCAAGTCTTGAAGGCAAAAAACTGGCTTCATTTACAAGGATATCTTCCACAGTGCAGGTTTTGTTTCTATCTTTTTCCCTATCGACATTTGATGCCGACTTTTTATTTATATACAATTTCACATTATTCATACTTATGCTGTGTTTTGAAAAATAATGCAGGCGGCAATGGAAGACGCACTGGTTCGTATTTTAACTCCTAGGCGTTCTATTGACATATTGAGGGATGTTCATGCTGCAAAAGAGCAAAGGAAACCATATGTTGTTGTATTTGTTGGAGTTAATGGAGTTGGAAAATCTACTAATCTTGCTAAGGTGAAGGACGTTCATATATTCTTCTTCTCTTTATGTAAAAATTCCGTATGTCGGGCTTGCTTTTTAACCTGAAGGAGATATTCCATTTTCTGTGTGATTATGCAGGTTGCTTACTGGCTTCAGCAACACAATGTTAATGTCATGATGGCTGCTTGTGATACATTTCGATCAGGAGCTGTTGAGCAGTTGCGGACTCATGCACGCAGACTTCAGGTTTACATTGATTTTAGTGCTTAAAGATTAATACATATATTGTTAGTAATATTAATAATAACCTTATAATTCCCCCTTTCAGATCCCTATATTTGAGAAGGGTTATGAAAAAGATCCTGCTGTTGTGGCAAAAGAAGCAATTCAGGAAGCTTCACGGAATGGTTCGGATGTTGTGCTAGTCGACACAGCTGGTCGTATGCAGGTAATAATTTGCAGTTGTTGTTGTAGCAAAAGTTTATTGATTTTATGGGGGTGTACAATATACCAAATGACTCAATACTATTGGTTATCTGTTAGGAACCCGGGATTAATACCGGTTTTATATTGACTAACGAAAGGAAATTGAGCCACGCTCTTATAGGAAAGCAACAGACCACCTGAGCCAAGGCTCCTTCAGAGAGGAATATCCTACTCCGCCTAACTGAATGAAACAGTTACTAACTTCTAGAATGAATGGATATTAAGTGGTCCAGATACCCTCCCAATCTTTTACGCACTTATTCCTAACAGAATCCCCTTAAGAAATGGAACCTCTAATGCCACGTCATTAACCATCAGCTCTCTTAAGTCTTCTAGAGTATACCCTCCAAGGTTTGGGATGTGGGCCAGTATCCACAATCTGATCCTCTTCATGGCCCATTTCATTATTGGGCTCCAGAGCTCTATCACTGTTTCAGTTTCTAGGCCTTTGCTGTCAAGAGATAGTACTGAAAATGAACCTTTTATGTTTATTGGAATAGAGGAAATTGTCATAGAGGAAAATTGTCATAGATGAATGGTTTTGGTTATATCTAGAGACTATTGACGATGTTTATTTAAATGCATTTATATGTTCACCACTTCATCTTACATGTCACTGATGGTTTTCAGGATAATGAACCATTGATGAGAGCCCTGTCAAAGCTGATCTACCTTAACAATCCTGACCTTGTCTTATTTGTTGGAGAAGCACTGGTTGGCAATGATGCAGTTGATCAGCTTTCAAAGTTCAACCAGGTTAGGTGCAATATATTCAATAGTAGCTTTGTCCAACTACAATTGGGTCTTCGTCTCTCTTTTTCCCATATGTCTGTTATTGAACCCATTTATTTTGTTGCAGAAACTGGCTGACCTCTCCACATCTCCTACACCCAGATTGATTGATGGGATCTTGCTCACAAAGTTTGACACTATTGATGATAAGGTATGCAAATACTGGAATTGCAAGTAAATTTATGGCTAAGCATTTGGATATTCTTGATGAACATTTATTGGTTGGCTAGGACGGAGACTGTCCATTTTTTAAAAAAGTACAACCATTAATTGGTTATATAGTCAAATATAATTTAATATGGGTAATGATTATTGTTACGAATTAATAGCCACAAGAAAGCATCGAATGAATCATGTCCGCTGATTTTGTTTCCATCTCACCCATGTATTTCGCCCCCTTCCCTTTATTTTGTCTTTGCTAGTTTTTATGTGTTATTCTTGCTTTTCTTGCCAATTTCATTCGTAAGAAATAGCACTGCTCATTTAATATAGATGAAATCGTTTGCTAATTATGTTTGATTTTGTCAGGTGGGAGCTGCACTTTCAATGGTTTACATATCTGGAGCTCCAGTCATGTTTGTGGGATGCGGACAGTCCTATACCGACCTCAAGAAACTCAACGTCAAGTCCATTGTGAAGACGCTCCTTAAATGA

Protein sequence

>MS.gene011293.t1

MLEQLLIFTRGGLILWSCNEIGNALKGSPIDTLIRSCLLEERSGAASYNYDAPGAAYSLKWTFHNDLGLVFVAVYQRILHLLYVDDLLAAVKGEFSQVYDPTRTVYRDFDQIFKQLKIEAEARAEDLKKSNPVVVGGNRKQQVTWKGDGSDGKKNGSAGGGGGGLKNDGDGKNGKKNSDNDRSVIANNSNGYNLRSNGVVGNVSVNGKENDSVNNGAFDVNRLQKKVRNKGGNGKKTDAVVTKAEPKKVVKKNRVWDDKPVETKLDFTDHVDVDGDADKDRKVDYLAKEQGESMMDKDEIFSSDSEDEDDYDDDDDDDNAGKKSKPDAKKKGWFSSMFQSIAGKANLEKSDLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTVQAAMEDALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLQQHNVNVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTSPTPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK