Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011293.t1 | XP_003610309.1 | 92.5 | 638 | 41 | 2 | 1 | 638 | 1 | 631 | 2.40E-298 | 1034.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011293.t1 | Q9U5L1 | 42.2 | 656 | 319 | 10 | 1 | 638 | 1 | 614 | 2.5e-110 | 401.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011293.t1 | G7JGN9 | 92.5 | 638 | 41 | 2 | 1 | 638 | 1 | 631 | 1.8e-298 | 1034.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene011293 | MS.gene52620 | PPI |
MS.gene011293 | MS.gene035629 | PPI |
MS.gene005189 | MS.gene011293 | PPI |
MS.gene064542 | MS.gene011293 | PPI |
MS.gene011293 | MS.gene91547 | PPI |
MS.gene012490 | MS.gene011293 | PPI |
MS.gene44056 | MS.gene011293 | PPI |
MS.gene73119 | MS.gene011293 | PPI |
MS.gene40741 | MS.gene011293 | PPI |
MS.gene035805 | MS.gene011293 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011293.t1 | MTR_4g130770 | 97.179 | 638 | 11 | 2 | 1 | 638 | 1 | 631 | 0.0 | 1256 |
MS.gene011293.t1 | MTR_4g010050 | 30.962 | 239 | 147 | 3 | 399 | 637 | 75 | 295 | 1.39e-30 | 126 |
MS.gene011293.t1 | MTR_7g104890 | 34.536 | 194 | 116 | 2 | 432 | 625 | 33 | 215 | 3.92e-30 | 123 |
MS.gene011293.t1 | MTR_7g104890 | 28.082 | 292 | 192 | 4 | 334 | 625 | 75 | 348 | 1.31e-29 | 124 |
MS.gene011293.t1 | MTR_2g104050 | 30.544 | 239 | 148 | 3 | 399 | 637 | 75 | 295 | 1.92e-29 | 122 |
MS.gene011293.t1 | MTR_8g032340 | 27.517 | 298 | 185 | 8 | 350 | 637 | 94 | 370 | 4.94e-19 | 89.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011293.t1 | AT4G30600 | 75.000 | 652 | 131 | 12 | 1 | 638 | 1 | 634 | 0.0 | 888 |
MS.gene011293.t1 | AT4G30600 | 75.000 | 652 | 131 | 12 | 1 | 638 | 1 | 634 | 0.0 | 888 |
MS.gene011293.t1 | AT1G48900 | 26.797 | 306 | 206 | 3 | 332 | 637 | 8 | 295 | 6.02e-32 | 129 |
MS.gene011293.t1 | AT1G48900 | 26.797 | 306 | 206 | 3 | 332 | 637 | 8 | 295 | 6.17e-32 | 130 |
MS.gene011293.t1 | AT5G03940 | 28.571 | 294 | 192 | 4 | 332 | 625 | 83 | 358 | 1.05e-31 | 130 |
MS.gene011293.t1 | AT1G15310 | 28.727 | 275 | 178 | 3 | 363 | 637 | 39 | 295 | 1.49e-31 | 129 |
MS.gene011293.t1 | AT2G45770 | 29.667 | 300 | 180 | 8 | 346 | 637 | 89 | 365 | 4.42e-27 | 113 |
MS.gene011293.t1 | AT5G49500 | 24.351 | 308 | 213 | 4 | 332 | 637 | 8 | 297 | 2.97e-23 | 104 |
MS.gene011293.t1 | AT5G49500 | 29.480 | 173 | 111 | 2 | 465 | 637 | 14 | 175 | 7.65e-20 | 92.4 |
Find 142 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAGTTTCATCCTTTCATTTA+AGG | 0.135782 | 8.2:-74841955 | None:intergenic |
GGATAGGAAGGTTGATTATT+TGG | 0.186314 | 8.2:+74838587 | MS.gene011293:CDS |
CTTTCAATGGTTTACATATC+TGG | 0.196127 | 8.2:+74841851 | MS.gene011293:CDS |
CTTTGGTCATGCAATGAAAT+TGG | 0.219547 | 8.2:+74837793 | MS.gene011293:CDS |
TGATTATGCAGGTTGCTTAC+TGG | 0.239203 | 8.2:+74840160 | MS.gene011293:intron |
GTTGGTAATGTTAGTGTAAA+TGG | 0.240516 | 8.2:+74838348 | MS.gene011293:CDS |
CATAACCCTTCTCAAATATA+GGG | 0.264100 | 8.2:-74840363 | None:intergenic |
TCATAACCCTTCTCAAATAT+AGG | 0.269160 | 8.2:-74840364 | None:intergenic |
CCTGACCTTGTCTTATTTGT+TGG | 0.272603 | 8.2:+74841200 | MS.gene011293:CDS |
GTTGTATTTGTTGGAGTTAA+TGG | 0.282982 | 8.2:+74840015 | MS.gene011293:CDS |
CTTTATTCCTAACCTTCTTC+TGG | 0.284805 | 8.2:-74838419 | None:intergenic |
TATTGCTGGGAAGGCCAATT+TGG | 0.285068 | 8.2:+74839507 | MS.gene011293:CDS |
GGCAGTGCTGGTGGCGGCGG+CGG | 0.324669 | 8.2:+74838216 | MS.gene011293:CDS |
CCATATGTTGTTGTATTTGT+TGG | 0.324829 | 8.2:+74840006 | MS.gene011293:CDS |
CAAGTCCGACTTCTCCAAAT+TGG | 0.330709 | 8.2:-74839521 | None:intergenic |
TGATTTGCTTGCTGCTGTTA+AGG | 0.337905 | 8.2:+74838005 | MS.gene011293:CDS |
CAAGAGGAGGATTAATCCTT+TGG | 0.352909 | 8.2:+74837776 | MS.gene011293:CDS |
AACCAAGGCTGAGCCGAAAA+AGG | 0.357649 | 8.2:+74838473 | MS.gene011293:CDS |
GACTCATGCACGCAGACTTC+AGG | 0.360707 | 8.2:+74840257 | MS.gene011293:CDS |
AGTGCTGGTGGCGGCGGCGG+TGG | 0.364428 | 8.2:+74838219 | MS.gene011293:CDS |
ATGCTTGTGCTCAGTATTGC+TGG | 0.365590 | 8.2:+74839493 | MS.gene011293:intron |
CAAGATCCCATCAATCAATC+TGG | 0.383740 | 8.2:-74841409 | None:intergenic |
GAGTTTCTTGAGGTCGGTAT+AGG | 0.387081 | 8.2:-74841906 | None:intergenic |
CAGAAGAAGGTTAGGAATAA+AGG | 0.388438 | 8.2:+74838420 | MS.gene011293:CDS |
ACGGATCATGTTGATGTTGA+TGG | 0.394256 | 8.2:+74838552 | MS.gene011293:CDS |
GGTGGGAGCTGCACTTTCAA+TGG | 0.401497 | 8.2:+74841838 | MS.gene011293:intron |
GATTTGCTTGCTGCTGTTAA+GGG | 0.405066 | 8.2:+74838006 | MS.gene011293:CDS |
TTGAGAAGTAACGGTGTTGT+TGG | 0.406379 | 8.2:+74838330 | MS.gene011293:CDS |
CTGTGGTTGTAGGTGGGAAT+AGG | 0.413522 | 8.2:+74838145 | MS.gene011293:CDS |
ATAAATACATACCACATTCT+TGG | 0.414415 | 8.2:-74839581 | None:intergenic |
TCCTTCAGAGCTTTCAAAGC+TGG | 0.420133 | 8.2:-74839547 | None:intergenic |
GTTTGACACTATTGATGATA+AGG | 0.420806 | 8.2:+74841440 | MS.gene011293:CDS |
CCAACAAATACAACAACATA+TGG | 0.423685 | 8.2:-74840006 | None:intergenic |
AAATCTAATTTAGTTTCAAC+GGG | 0.426379 | 8.2:-74838528 | None:intergenic |
TGTGGCAAAAGAAGCAATTC+AGG | 0.429961 | 8.2:+74840402 | MS.gene011293:CDS |
AATGGCAGTGCTGGTGGCGG+CGG | 0.430153 | 8.2:+74838213 | MS.gene011293:CDS |
TTTGACAGGGCTCTCATCAA+TGG | 0.430819 | 8.2:-74841158 | None:intergenic |
CAATTTGGAGAAGTCGGACT+TGG | 0.441725 | 8.2:+74839522 | MS.gene011293:CDS |
TGTTGATGGGGATGCTGATA+AGG | 0.462630 | 8.2:+74838566 | MS.gene011293:CDS |
GGAAGCTTCACGGAATGGTT+CGG | 0.463640 | 8.2:+74840423 | MS.gene011293:CDS |
ATAGGCTCCAGAAGAAGGTT+AGG | 0.465195 | 8.2:+74838412 | MS.gene011293:CDS |
AAAATCTAATTTAGTTTCAA+CGG | 0.465883 | 8.2:-74838529 | None:intergenic |
GGCGTTCTATTGACATATTG+AGG | 0.470946 | 8.2:+74839953 | MS.gene011293:CDS |
AAATCGAATCCTGTGGTTGT+AGG | 0.472230 | 8.2:+74838135 | MS.gene011293:CDS |
CCTACACCCAGATTGATTGA+TGG | 0.472241 | 8.2:+74841402 | MS.gene011293:CDS |
CGGATCATGTTGATGTTGAT+GGG | 0.473173 | 8.2:+74838553 | MS.gene011293:CDS |
GAAGGTTGATTATTTGGCTA+AGG | 0.473509 | 8.2:+74838593 | MS.gene011293:CDS |
TGGAGCTCCAGTCATGTTTG+TGG | 0.474210 | 8.2:+74841871 | MS.gene011293:CDS |
CCAACAAATAAGACAAGGTC+AGG | 0.474859 | 8.2:-74841200 | None:intergenic |
TTTGTTGGAGTTAATGGAGT+TGG | 0.477015 | 8.2:+74840021 | MS.gene011293:CDS |
TAAGGTAGATCAGCTTTGAC+AGG | 0.479756 | 8.2:-74841172 | None:intergenic |
AATTCTGCATCTGCTTTATG+TGG | 0.482797 | 8.2:+74837981 | MS.gene011293:CDS |
CTTATTTGTTGGAGAAGCAC+TGG | 0.484654 | 8.2:+74841211 | MS.gene011293:CDS |
AAGGATATCTTCCACAGTGC+AGG | 0.486091 | 8.2:+74839787 | MS.gene011293:CDS |
GAGCTGCTTATTCTCTCAAA+TGG | 0.492519 | 8.2:+74837911 | MS.gene011293:CDS |
ATGGGGATGCTGATAAGGAT+AGG | 0.493111 | 8.2:+74838571 | MS.gene011293:CDS |
GCTTGTGATACATTTCGATC+AGG | 0.496091 | 8.2:+74840216 | MS.gene011293:CDS |
AGACAAGGTCAGGATTGTTA+AGG | 0.496116 | 8.2:-74841190 | None:intergenic |
GTTAGGAATAAAGGCGGGAA+TGG | 0.496788 | 8.2:+74838429 | MS.gene011293:CDS |
TGTAAATAGGCTCCAGAAGA+AGG | 0.499134 | 8.2:+74838407 | MS.gene011293:CDS |
GCGTTCTATTGACATATTGA+GGG | 0.507989 | 8.2:+74839954 | MS.gene011293:CDS |
CTATTCCCACCTACAACCAC+AGG | 0.514029 | 8.2:-74838144 | None:intergenic |
TCAGTGGCAGCAAGTCTTGA+AGG | 0.514318 | 8.2:+74839743 | MS.gene011293:CDS |
CCAGTCATGTTTGTGGGATG+CGG | 0.515363 | 8.2:+74841878 | MS.gene011293:CDS |
GAAATTGGTAACGCTTTGAA+AGG | 0.518123 | 8.2:+74837808 | MS.gene011293:CDS |
GATTATTTGGCTAAGGAACA+AGG | 0.518974 | 8.2:+74838600 | MS.gene011293:CDS |
TCAGATCCCTATATTTGAGA+AGG | 0.520704 | 8.2:+74840357 | MS.gene011293:intron |
CTACACCCAGATTGATTGAT+GGG | 0.521118 | 8.2:+74841403 | MS.gene011293:CDS |
GGATCTGACGGGAAGAAGAA+TGG | 0.524281 | 8.2:+74838195 | MS.gene011293:CDS |
CAGGAGCTGTTGAGCAGTTG+CGG | 0.524608 | 8.2:+74840235 | MS.gene011293:CDS |
AAAATCTCGATACACAGTTC+TGG | 0.526147 | 8.2:-74838055 | None:intergenic |
GGAGCTCCAGTCATGTTTGT+GGG | 0.528002 | 8.2:+74841872 | MS.gene011293:CDS |
CAGATCCCTATATTTGAGAA+GGG | 0.528857 | 8.2:+74840358 | MS.gene011293:intron |
GACGTTGAGTTTCTTGAGGT+CGG | 0.531116 | 8.2:-74841912 | None:intergenic |
GGAACAAGGGGAGAGTATGA+TGG | 0.532793 | 8.2:+74838614 | MS.gene011293:CDS |
AAGCAATTCAGGAAGCTTCA+CGG | 0.533244 | 8.2:+74840413 | MS.gene011293:CDS |
GGCGGCAATGGAAGACGCAC+TGG | 0.534128 | 8.2:+74839912 | MS.gene011293:intron |
CGACACAGCTGGTCGTATGC+AGG | 0.535402 | 8.2:+74840459 | MS.gene011293:CDS |
GGGAAGAAGAATGGCAGTGC+TGG | 0.539935 | 8.2:+74838204 | MS.gene011293:CDS |
ATTCAGGAAGCTTCACGGAA+TGG | 0.540152 | 8.2:+74840418 | MS.gene011293:CDS |
TCGAATCCTGTGGTTGTAGG+TGG | 0.540946 | 8.2:+74838138 | MS.gene011293:CDS |
TGGAAGGGAGATGGATCTGA+CGG | 0.542887 | 8.2:+74838183 | MS.gene011293:CDS |
TGTGCTCAGTATTGCTGGGA+AGG | 0.545968 | 8.2:+74839498 | MS.gene011293:intron |
CAATTTCATTGCATGACCAA+AGG | 0.546136 | 8.2:-74837792 | None:intergenic |
GATTCGATCTTGTCTTCTAG+AGG | 0.546611 | 8.2:+74837849 | MS.gene011293:CDS |
TGTCTTCTAGAGGAGCGATC+TGG | 0.547527 | 8.2:+74837859 | MS.gene011293:CDS |
ATCTCGATACACAGTTCTGG+TGG | 0.553576 | 8.2:-74838052 | None:intergenic |
AAAATCTACTAATCTTGCTA+AGG | 0.553829 | 8.2:+74840044 | MS.gene011293:CDS |
GCAAGTTTACCTCTGGAACA+TGG | 0.554471 | 8.2:-74838757 | None:intergenic |
CAGGTGACATGGAAGGGAGA+TGG | 0.559417 | 8.2:+74838174 | MS.gene011293:CDS |
CCGCATCCCACAAACATGAC+TGG | 0.559796 | 8.2:-74841878 | None:intergenic |
ACCAGCTTTGAAAGCTCTGA+AGG | 0.559926 | 8.2:+74839546 | MS.gene011293:CDS |
TTGAGAGAATAAGCAGCTCC+AGG | 0.560375 | 8.2:-74837907 | None:intergenic |
AAACAGCAGGTGACATGGAA+GGG | 0.561061 | 8.2:+74838168 | MS.gene011293:CDS |
AAGAAGAATGGCAGTGCTGG+TGG | 0.566063 | 8.2:+74838207 | MS.gene011293:CDS |
AAGAATGGCAGTGCTGGTGG+CGG | 0.566224 | 8.2:+74838210 | MS.gene011293:CDS |
CAATCTGGGTGTAGGAGATG+TGG | 0.570779 | 8.2:-74841394 | None:intergenic |
GGATGCTGATAAGGATAGGA+AGG | 0.575386 | 8.2:+74838575 | MS.gene011293:CDS |
GCAGTTGAAGATTGAAGCTG+AGG | 0.577891 | 8.2:+74838092 | MS.gene011293:CDS |
AAGATCCCATCAATCAATCT+GGG | 0.579799 | 8.2:-74841408 | None:intergenic |
GGTTATAATTTGAGAAGTAA+CGG | 0.581929 | 8.2:+74838321 | MS.gene011293:CDS |
CCATCAATCAATCTGGGTGT+AGG | 0.581937 | 8.2:-74841402 | None:intergenic |
ACTTGACGTTGAGTTTCTTG+AGG | 0.584980 | 8.2:-74841916 | None:intergenic |
GAAACAGCAGGTGACATGGA+AGG | 0.585391 | 8.2:+74838167 | MS.gene011293:CDS |
TGAAGCTGAGGCACGTGCTG+AGG | 0.588224 | 8.2:+74838104 | MS.gene011293:CDS |
TTTGTTGGAGAAGCACTGGT+TGG | 0.588986 | 8.2:+74841215 | MS.gene011293:CDS |
GGCGGTGGTTTGAAGAATGA+TGG | 0.590848 | 8.2:+74838234 | MS.gene011293:CDS |
ATAGGAAACAGCAGGTGACA+TGG | 0.591167 | 8.2:+74838163 | MS.gene011293:CDS |
GTTATTGCGAATAACAGTAA+CGG | 0.596419 | 8.2:+74838300 | MS.gene011293:CDS |
TGTTAAGGGTGAATTCTCGC+AGG | 0.597191 | 8.2:+74838020 | MS.gene011293:CDS |
TTTAAGGAGCGTCTTCACAA+TGG | 0.598414 | 8.2:-74841939 | None:intergenic |
TGCTTGTGCTCAGTATTGCT+GGG | 0.598645 | 8.2:+74839494 | MS.gene011293:intron |
CGAATCCTGTGGTTGTAGGT+GGG | 0.598863 | 8.2:+74838139 | MS.gene011293:CDS |
AGGTGGGAATAGGAAACAGC+AGG | 0.600879 | 8.2:+74838155 | MS.gene011293:CDS |
ATTATTTGGCTAAGGAACAA+GGG | 0.604812 | 8.2:+74838601 | MS.gene011293:CDS |
GGAAGGGAGATGGATCTGAC+GGG | 0.606947 | 8.2:+74838184 | MS.gene011293:CDS |
TTCATGCTGCAAAAGAGCAA+AGG | 0.608654 | 8.2:+74839980 | MS.gene011293:CDS |
ACACAATGTTAATGTCATGA+TGG | 0.611925 | 8.2:+74840191 | MS.gene011293:CDS |
GAGAATGATAGTGTAAACAA+TGG | 0.612652 | 8.2:+74838375 | MS.gene011293:CDS |
GATCGAATCAATGTATCGAT+CGG | 0.615533 | 8.2:-74837835 | None:intergenic |
TTATTTGGCTAAGGAACAAG+GGG | 0.618597 | 8.2:+74838602 | MS.gene011293:CDS |
GTTTGAAGAATGATGGTGAT+GGG | 0.620460 | 8.2:+74838241 | MS.gene011293:CDS |
TGAGAAGCTATGTGAATCAG+TGG | 0.623505 | 8.2:+74839727 | MS.gene011293:CDS |
GTTGTGCTAGTCGACACAGC+TGG | 0.625758 | 8.2:+74840448 | MS.gene011293:CDS |
TCTTACAATTACGATGCACC+TGG | 0.626789 | 8.2:+74837889 | MS.gene011293:CDS |
AAGGTAGATCAGCTTTGACA+GGG | 0.628493 | 8.2:-74841171 | None:intergenic |
AACAGACGCTGTTGTAACCA+AGG | 0.629920 | 8.2:+74838458 | MS.gene011293:CDS |
GAAGGCCAATTTGGAGAAGT+CGG | 0.633774 | 8.2:+74839516 | MS.gene011293:CDS |
AGAAGGTTAGGAATAAAGGC+GGG | 0.636662 | 8.2:+74838424 | MS.gene011293:CDS |
TCAGCTTTCAAAGTTCAACC+AGG | 0.642481 | 8.2:+74841253 | MS.gene011293:CDS |
TCTCGATACACAGTTCTGGT+GGG | 0.644564 | 8.2:-74838051 | None:intergenic |
TTTGAAGAAATCGAATCCTG+TGG | 0.647958 | 8.2:+74838128 | MS.gene011293:CDS |
CTTCTCCAACAAATAAGACA+AGG | 0.649892 | 8.2:-74841205 | None:intergenic |
TAGACTCATGACCAAGAATG+TGG | 0.655583 | 8.2:+74839570 | MS.gene011293:CDS |
GGATCATGTTGATGTTGATG+GGG | 0.663445 | 8.2:+74838554 | MS.gene011293:CDS |
TGTTATTCGCAATAACAGAA+CGG | 0.664094 | 8.2:-74838293 | None:intergenic |
ATGATGATGATGATAATGCT+GGG | 0.668563 | 8.2:+74838691 | MS.gene011293:CDS |
GGTTTGAAGAATGATGGTGA+TGG | 0.671022 | 8.2:+74838240 | MS.gene011293:CDS |
AAGAAGGTTAGGAATAAAGG+CGG | 0.679488 | 8.2:+74838423 | MS.gene011293:CDS |
AATATGTCAATAGAACGCCT+AGG | 0.693947 | 8.2:-74839949 | None:intergenic |
TGGGTGTAGGAGATGTGGAG+AGG | 0.699067 | 8.2:-74841389 | None:intergenic |
TAGAAACAAAACCTGCACTG+TGG | 0.717352 | 8.2:-74839798 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGTCAAATATAATTTAATAT+GGG | + | chr8.2:74841591-74841610 | MS.gene011293:intron | 10.0% |
!! | ATTGTATATAAATAAAAAGT+CGG | - | chr8.2:74839849-74839868 | None:intergenic | 10.0% |
!! | TAGTCAAATATAATTTAATA+TGG | + | chr8.2:74841590-74841609 | MS.gene011293:intron | 10.0% |
!!! | AAAAGTTTATTGATTTTATG+GGG | + | chr8.2:74840508-74840527 | MS.gene011293:intron | 15.0% |
!!! | AAAATCTAATTTAGTTTCAA+CGG | - | chr8.2:74838532-74838551 | None:intergenic | 15.0% |
!!! | CAAAAGTTTATTGATTTTAT+GGG | + | chr8.2:74840507-74840526 | MS.gene011293:intron | 15.0% |
!!! | TGAAACTAAATTAGATTTTA+CGG | + | chr8.2:74838533-74838552 | MS.gene011293:CDS | 15.0% |
!! | AAAAGGTAGTTAAGAAAAAT+AGG | + | chr8.2:74838490-74838509 | MS.gene011293:CDS | 20.0% |
!! | AAAGGTAGTTAAGAAAAATA+GGG | + | chr8.2:74838491-74838510 | MS.gene011293:CDS | 20.0% |
!! | ATGAATTAAATTGTTACTCT+TGG | + | chr8.2:74839226-74839245 | MS.gene011293:intron | 20.0% |
!! | TATTCTTGATGAACATTTAT+TGG | + | chr8.2:74841510-74841529 | MS.gene011293:intron | 20.0% |
!! | TCTATTCCAATAAACATAAA+AGG | - | chr8.2:74841000-74841019 | None:intergenic | 20.0% |
!! | TTGACTATATAACCAATTAA+TGG | - | chr8.2:74841577-74841596 | None:intergenic | 20.0% |
!!! | AAAAAAGTACAACCATTAAT+TGG | + | chr8.2:74841562-74841581 | MS.gene011293:intron | 20.0% |
!!! | AAACAATTTAAGTATTGTCA+AGG | - | chr8.2:74838981-74839000 | None:intergenic | 20.0% |
!!! | AAAGTTTATTGATTTTATGG+GGG | + | chr8.2:74840509-74840528 | MS.gene011293:intron | 20.0% |
!!! | AAATCTAATTTAGTTTCAAC+GGG | - | chr8.2:74838531-74838550 | None:intergenic | 20.0% |
!!! | AATGAACCTTTTATGTTTAT+TGG | + | chr8.2:74840991-74841010 | MS.gene011293:intron | 20.0% |
!!! | CATTTAACTTGTAATGATAT+TGG | + | chr8.2:74839131-74839150 | MS.gene011293:intron | 20.0% |
!!! | GCAAAAGTTTATTGATTTTA+TGG | + | chr8.2:74840506-74840525 | MS.gene011293:intron | 20.0% |
!!! | GGTTGTACTTTTTTAAAAAA+TGG | - | chr8.2:74841556-74841575 | None:intergenic | 20.0% |
!!! | TAATTATGTTTGATTTTGTC+AGG | + | chr8.2:74841817-74841836 | MS.gene011293:intron | 20.0% |
!!! | TTTTATGTTTATTGGAATAG+AGG | + | chr8.2:74840999-74841018 | MS.gene011293:intron | 20.0% |
!!! | TTTTTCTTAACTACCTTTTT+CGG | - | chr8.2:74838489-74838508 | None:intergenic | 20.0% |
! | AAAATCTACTAATCTTGCTA+AGG | + | chr8.2:74840044-74840063 | MS.gene011293:CDS | 25.0% |
! | AACTAGCAAAGACAAAATAA+AGG | - | chr8.2:74841715-74841734 | None:intergenic | 25.0% |
! | ACTAGCAAAGACAAAATAAA+GGG | - | chr8.2:74841714-74841733 | None:intergenic | 25.0% |
! | AGTTAAGAAAAATAGGGTTT+GGG | + | chr8.2:74838497-74838516 | MS.gene011293:CDS | 25.0% |
! | AGTTTCTGCAACAAAATAAA+TGG | - | chr8.2:74841363-74841382 | None:intergenic | 25.0% |
! | ATAAATACATACCACATTCT+TGG | - | chr8.2:74839584-74839603 | None:intergenic | 25.0% |
! | GGTTATAATTTGAGAAGTAA+CGG | + | chr8.2:74838321-74838340 | MS.gene011293:CDS | 25.0% |
! | GTTTCTGCAACAAAATAAAT+GGG | - | chr8.2:74841362-74841381 | None:intergenic | 25.0% |
! | TAAATTTATGGCTAAGCATT+TGG | + | chr8.2:74841486-74841505 | MS.gene011293:intron | 25.0% |
! | TAAGACATATGTGCATTATT+AGG | + | chr8.2:74839098-74839117 | MS.gene011293:intron | 25.0% |
! | TAATGATGATTTACTGCAAT+TGG | + | chr8.2:74839007-74839026 | MS.gene011293:intron | 25.0% |
! | TAGAATGAATGGATATTAAG+TGG | + | chr8.2:74840724-74840743 | MS.gene011293:intron | 25.0% |
! | TAGTTAAGAAAAATAGGGTT+TGG | + | chr8.2:74838496-74838515 | MS.gene011293:CDS | 25.0% |
! | TATGTAAAAATTCCGTATGT+CGG | + | chr8.2:74840097-74840116 | MS.gene011293:intron | 25.0% |
! | TGGAATTGCAAGTAAATTTA+TGG | + | chr8.2:74841474-74841493 | MS.gene011293:intron | 25.0% |
! | TTCGTTAGTCAATATAAAAC+CGG | - | chr8.2:74840595-74840614 | None:intergenic | 25.0% |
!! | AATACTATTGGTTATCTGTT+AGG | + | chr8.2:74840554-74840573 | MS.gene011293:intron | 25.0% |
!! | ACGTCTAAATTTTGTTCTAT+TGG | + | chr8.2:74839633-74839652 | MS.gene011293:intron | 25.0% |
!! | CTATTTCTTACGAATGAAAT+TGG | - | chr8.2:74841764-74841783 | None:intergenic | 25.0% |
!!! | ATTTATTTTGTTGCAGAAAC+TGG | + | chr8.2:74841362-74841381 | MS.gene011293:intron | 25.0% |
!!! | GTTTTATATTGACTAACGAA+AGG | + | chr8.2:74840595-74840614 | MS.gene011293:intron | 25.0% |
!!! | TGTGTTTTGAAAAATAATGC+AGG | + | chr8.2:74839891-74839910 | MS.gene011293:intron | 25.0% |
!!! | TTACTAACTTCTAGAATGAA+TGG | + | chr8.2:74840713-74840732 | MS.gene011293:intron | 25.0% |
AAAGACAAAATAAAGGGAAG+GGG | - | chr8.2:74841708-74841727 | None:intergenic | 30.0% | |
AATAGAGGAAATTGTCATAG+AGG | + | chr8.2:74841014-74841033 | MS.gene011293:intron | 30.0% | |
AATTACACTGTAAACTTCCT+TGG | + | chr8.2:74839043-74839062 | MS.gene011293:intron | 30.0% | |
ACACAATGTTAATGTCATGA+TGG | + | chr8.2:74840191-74840210 | MS.gene011293:CDS | 30.0% | |
ACCAAATGACTCAATACTAT+TGG | + | chr8.2:74840542-74840561 | MS.gene011293:intron | 30.0% | |
AGTAACTGTTTCATTCAGTT+AGG | - | chr8.2:74840698-74840717 | None:intergenic | 30.0% | |
AGTGTTATATTTCCGTCAAT+TGG | + | chr8.2:74838919-74838938 | MS.gene011293:intron | 30.0% | |
ATGACTAAGATTTCAATCCA+AGG | - | chr8.2:74839063-74839082 | None:intergenic | 30.0% | |
ATGATAAGGTATGCAAATAC+TGG | + | chr8.2:74841454-74841473 | MS.gene011293:intron | 30.0% | |
ATGTAAAAATTCCGTATGTC+GGG | + | chr8.2:74840098-74840117 | MS.gene011293:intron | 30.0% | |
ATTAGAGGTTCCATTTCTTA+AGG | - | chr8.2:74840797-74840816 | None:intergenic | 30.0% | |
ATTATTTGGCTAAGGAACAA+GGG | + | chr8.2:74838601-74838620 | MS.gene011293:CDS | 30.0% | |
CAAAGACAAAATAAAGGGAA+GGG | - | chr8.2:74841709-74841728 | None:intergenic | 30.0% | |
CATAACCCTTCTCAAATATA+GGG | - | chr8.2:74840366-74840385 | None:intergenic | 30.0% | |
CCAACAAATACAACAACATA+TGG | - | chr8.2:74840009-74840028 | None:intergenic | 30.0% | |
CCATATGTTGTTGTATTTGT+TGG | + | chr8.2:74840006-74840025 | MS.gene011293:CDS | 30.0% | |
CTTGATGAACATTTATTGGT+TGG | + | chr8.2:74841514-74841533 | MS.gene011293:intron | 30.0% | |
CTTTCAATGGTTTACATATC+TGG | + | chr8.2:74841851-74841870 | MS.gene011293:CDS | 30.0% | |
GAATAAGTGCGTAAAAGATT+GGG | - | chr8.2:74840762-74840781 | None:intergenic | 30.0% | |
GGAAAATTGTCATAGATGAA+TGG | + | chr8.2:74841035-74841054 | MS.gene011293:intron | 30.0% | |
GTTATTGCGAATAACAGTAA+CGG | + | chr8.2:74838300-74838319 | MS.gene011293:CDS | 30.0% | |
TATAAAACCGGTATTAATCC+CGG | - | chr8.2:74840583-74840602 | None:intergenic | 30.0% | |
TCAAATATAGGGATCTGAAA+GGG | - | chr8.2:74840355-74840374 | None:intergenic | 30.0% | |
TCATAACCCTTCTCAAATAT+AGG | - | chr8.2:74840367-74840386 | None:intergenic | 30.0% | |
TGTTATTCGCAATAACAGAA+CGG | - | chr8.2:74838296-74838315 | None:intergenic | 30.0% | |
TTAGAGGTTCCATTTCTTAA+GGG | - | chr8.2:74840796-74840815 | None:intergenic | 30.0% | |
! | AAAAACTGGCTTCATTTACA+AGG | + | chr8.2:74839768-74839787 | MS.gene011293:CDS | 30.0% |
! | ACCAATAGTATTGAGTCATT+TGG | - | chr8.2:74840546-74840565 | None:intergenic | 30.0% |
! | ATGATGATGATGATAATGCT+GGG | + | chr8.2:74838691-74838710 | MS.gene011293:CDS | 30.0% |
! | ATGGAGCTTTTGATGTAAAT+AGG | + | chr8.2:74838394-74838413 | MS.gene011293:CDS | 30.0% |
! | GACGGAAATATAACACTTTT+CGG | - | chr8.2:74838916-74838935 | None:intergenic | 30.0% |
! | GAGAATGATAGTGTAAACAA+TGG | + | chr8.2:74838375-74838394 | MS.gene011293:CDS | 30.0% |
! | GTTGTATTTGTTGGAGTTAA+TGG | + | chr8.2:74840015-74840034 | MS.gene011293:CDS | 30.0% |
! | GTTTGACACTATTGATGATA+AGG | + | chr8.2:74841440-74841459 | MS.gene011293:CDS | 30.0% |
! | TTGTCATAGATGAATGGTTT+TGG | + | chr8.2:74841041-74841060 | MS.gene011293:intron | 30.0% |
!! | GTTGGTAATGTTAGTGTAAA+TGG | + | chr8.2:74838348-74838367 | MS.gene011293:CDS | 30.0% |
!! | TATGTTTGATTTTGTCAGGT+GGG | + | chr8.2:74841821-74841840 | MS.gene011293:intron | 30.0% |
!! | TTATGTTTGATTTTGTCAGG+TGG | + | chr8.2:74841820-74841839 | MS.gene011293:intron | 30.0% |
!!! | GTTTTGAAAAATAATGCAGG+CGG | + | chr8.2:74839894-74839913 | MS.gene011293:intron | 30.0% |
AAAATCTCGATACACAGTTC+TGG | - | chr8.2:74838058-74838077 | None:intergenic | 35.0% | |
AAATATAGGGATCTGAAAGG+GGG | - | chr8.2:74840353-74840372 | None:intergenic | 35.0% | |
AACAGAATCCCCTTAAGAAA+TGG | + | chr8.2:74840784-74840803 | MS.gene011293:intron | 35.0% | |
AACTGTTTCATTCAGTTAGG+CGG | - | chr8.2:74840695-74840714 | None:intergenic | 35.0% | |
AAGAAGGTTAGGAATAAAGG+CGG | + | chr8.2:74838423-74838442 | MS.gene011293:CDS | 35.0% | |
AAGACAAAATAAAGGGAAGG+GGG | - | chr8.2:74841707-74841726 | None:intergenic | 35.0% | |
AAGATCCCATCAATCAATCT+GGG | - | chr8.2:74841411-74841430 | None:intergenic | 35.0% | |
AAGCCTGATGCTAAAAAGAA+GGG | + | chr8.2:74838723-74838742 | MS.gene011293:CDS | 35.0% | |
AAGTCTTGAAGGCAAAAAAC+TGG | + | chr8.2:74839754-74839773 | MS.gene011293:CDS | 35.0% | |
AATATGTCAATAGAACGCCT+AGG | - | chr8.2:74839952-74839971 | None:intergenic | 35.0% | |
AATTCTGCATCTGCTTTATG+TGG | + | chr8.2:74837981-74838000 | MS.gene011293:CDS | 35.0% | |
AGTAGCAGATCAAGGTTATT+TGG | - | chr8.2:74839373-74839392 | None:intergenic | 35.0% | |
ATAAAACCGGTATTAATCCC+GGG | - | chr8.2:74840582-74840601 | None:intergenic | 35.0% | |
ATCCTCAACATCATTAGATG+TGG | + | chr8.2:74839602-74839621 | MS.gene011293:intron | 35.0% | |
ATCTGAAAGGGGGAATTATA+AGG | - | chr8.2:74840343-74840362 | None:intergenic | 35.0% | |
ATTCATTCGATGCTTTCTTG+TGG | - | chr8.2:74841643-74841662 | None:intergenic | 35.0% | |
ATTCGTTTGAAAGTCAGGAA+AGG | + | chr8.2:74839155-74839174 | MS.gene011293:intron | 35.0% | |
CAAATATAGGGATCTGAAAG+GGG | - | chr8.2:74840354-74840373 | None:intergenic | 35.0% | |
CAATCAAAGCAACATGTAAG+AGG | - | chr8.2:74839266-74839285 | None:intergenic | 35.0% | |
CAATTTCATTGCATGACCAA+AGG | - | chr8.2:74837795-74837814 | None:intergenic | 35.0% | |
CAGAAGAAGGTTAGGAATAA+AGG | + | chr8.2:74838420-74838439 | MS.gene011293:CDS | 35.0% | |
CAGACAACAAATCCAATTGA+CGG | - | chr8.2:74838934-74838953 | None:intergenic | 35.0% | |
CAGATCCCTATATTTGAGAA+GGG | + | chr8.2:74840358-74840377 | MS.gene011293:intron | 35.0% | |
CTATCACTGTTTCAGTTTCT+AGG | + | chr8.2:74840941-74840960 | MS.gene011293:intron | 35.0% | |
CTCAAATATAGGGATCTGAA+AGG | - | chr8.2:74840356-74840375 | None:intergenic | 35.0% | |
CTGCATAATCACACAGAAAA+TGG | - | chr8.2:74840151-74840170 | None:intergenic | 35.0% | |
CTTCTCCAACAAATAAGACA+AGG | - | chr8.2:74841208-74841227 | None:intergenic | 35.0% | |
CTTTATTCCTAACCTTCTTC+TGG | - | chr8.2:74838422-74838441 | None:intergenic | 35.0% | |
CTTTGGTCATGCAATGAAAT+TGG | + | chr8.2:74837793-74837812 | MS.gene011293:CDS | 35.0% | |
GAAAATGGAATATCTCCTTC+AGG | - | chr8.2:74840136-74840155 | None:intergenic | 35.0% | |
GATTATTTGGCTAAGGAACA+AGG | + | chr8.2:74838600-74838619 | MS.gene011293:CDS | 35.0% | |
GCAAAGACAAAATAAAGGGA+AGG | - | chr8.2:74841710-74841729 | None:intergenic | 35.0% | |
GCACATATGTCTTAAAGCAA+AGG | - | chr8.2:74839092-74839111 | None:intergenic | 35.0% | |
GCGTTCTATTGACATATTGA+GGG | + | chr8.2:74839954-74839973 | MS.gene011293:CDS | 35.0% | |
GGAATAAGTGCGTAAAAGAT+TGG | - | chr8.2:74840763-74840782 | None:intergenic | 35.0% | |
GGGTTCAATAACAGACATAT+GGG | - | chr8.2:74841342-74841361 | None:intergenic | 35.0% | |
TACTAATCTTGCTAAGGTGA+AGG | + | chr8.2:74840050-74840069 | MS.gene011293:intron | 35.0% | |
TAGAGGTTCCATTTCTTAAG+GGG | - | chr8.2:74840795-74840814 | None:intergenic | 35.0% | |
TCAAGCAACACAACATCAAT+CGG | - | chr8.2:74838889-74838908 | None:intergenic | 35.0% | |
TCAATCAAAGTAGCAGATCA+AGG | - | chr8.2:74839381-74839400 | None:intergenic | 35.0% | |
TCAGATCCCTATATTTGAGA+AGG | + | chr8.2:74840357-74840376 | MS.gene011293:intron | 35.0% | |
TCATGGCCCATTTCATTATT+GGG | + | chr8.2:74840908-74840927 | MS.gene011293:intron | 35.0% | |
TGAATATATTGCACCTAACC+TGG | - | chr8.2:74841274-74841293 | None:intergenic | 35.0% | |
TGAGATGGAAACAAAATCAG+CGG | - | chr8.2:74841671-74841690 | None:intergenic | 35.0% | |
TGATGATTTACTGCAATTGG+TGG | + | chr8.2:74839010-74839029 | MS.gene011293:intron | 35.0% | |
TGGGTTCAATAACAGACATA+TGG | - | chr8.2:74841343-74841362 | None:intergenic | 35.0% | |
TGTGCATTATTAGGATGTCA+AGG | + | chr8.2:74839107-74839126 | MS.gene011293:intron | 35.0% | |
TTATTTGGCTAAGGAACAAG+GGG | + | chr8.2:74838602-74838621 | MS.gene011293:CDS | 35.0% | |
TTCATCTTACATGTCACTGA+TGG | + | chr8.2:74841119-74841138 | MS.gene011293:intron | 35.0% | |
TTCATGGCCCATTTCATTAT+TGG | + | chr8.2:74840907-74840926 | MS.gene011293:intron | 35.0% | |
TTGGTATTCGTTTGAAAGTC+AGG | + | chr8.2:74839150-74839169 | MS.gene011293:intron | 35.0% | |
TTTCAAAGTTCAACCAGGTT+AGG | + | chr8.2:74841258-74841277 | MS.gene011293:intron | 35.0% | |
TTTCTTAAGGGGATTCTGTT+AGG | - | chr8.2:74840784-74840803 | None:intergenic | 35.0% | |
TTTGAAGAAATCGAATCCTG+TGG | + | chr8.2:74838128-74838147 | MS.gene011293:CDS | 35.0% | |
TTTGTTGGAGTTAATGGAGT+TGG | + | chr8.2:74840021-74840040 | MS.gene011293:CDS | 35.0% | |
! | AGCTTTGTCCAACTACAATT+GGG | + | chr8.2:74841299-74841318 | MS.gene011293:intron | 35.0% |
! | CATTTTCTGTGTGATTATGC+AGG | + | chr8.2:74840149-74840168 | MS.gene011293:intron | 35.0% |
! | GAAGGTTGATTATTTGGCTA+AGG | + | chr8.2:74838593-74838612 | MS.gene011293:CDS | 35.0% |
! | GATCGAATCAATGTATCGAT+CGG | - | chr8.2:74837838-74837857 | None:intergenic | 35.0% |
! | GATGATGATGATGATAATGC+TGG | + | chr8.2:74838690-74838709 | MS.gene011293:CDS | 35.0% |
! | GGATAGGAAGGTTGATTATT+TGG | + | chr8.2:74838587-74838606 | MS.gene011293:CDS | 35.0% |
! | GTTTGAAGAATGATGGTGAT+GGG | + | chr8.2:74838241-74838260 | MS.gene011293:CDS | 35.0% |
! | TGAACATTTATTGGTTGGCT+AGG | + | chr8.2:74841519-74841538 | MS.gene011293:intron | 35.0% |
! | TGGACTTTTCACAATGATCT+AGG | + | chr8.2:74837931-74837950 | MS.gene011293:CDS | 35.0% |
!! | AATGATGGTGATGGGAAAAA+TGG | + | chr8.2:74838249-74838268 | MS.gene011293:CDS | 35.0% |
!! | ATGATGGTGATGGGAAAAAT+GGG | + | chr8.2:74838250-74838269 | MS.gene011293:CDS | 35.0% |
!! | GAAATTGGTAACGCTTTGAA+AGG | + | chr8.2:74837808-74837827 | MS.gene011293:CDS | 35.0% |
!! | TAGCTTTGTCCAACTACAAT+TGG | + | chr8.2:74841298-74841317 | MS.gene011293:intron | 35.0% |
!! | TTACATTCTGTGTCACTTGT+AGG | + | chr8.2:74839691-74839710 | MS.gene011293:intron | 35.0% |
!!! | CAGTTACTGATTTTCACAAG+AGG | + | chr8.2:74837760-74837779 | MS.gene011293:CDS | 35.0% |
!!! | GATTTTTAGTAGTGACAGTG+AGG | + | chr8.2:74838647-74838666 | MS.gene011293:CDS | 35.0% |
!!! | TGGTTCGTATTTTAACTCCT+AGG | + | chr8.2:74839932-74839951 | MS.gene011293:CDS | 35.0% |
!!! | TTACTGATTTTCACAAGAGG+AGG | + | chr8.2:74837763-74837782 | MS.gene011293:CDS | 35.0% |
AAAAATAATGCAGGCGGCAA+TGG | + | chr8.2:74839900-74839919 | MS.gene011293:intron | 40.0% | |
AAATCGAATCCTGTGGTTGT+AGG | + | chr8.2:74838135-74838154 | MS.gene011293:CDS | 40.0% | |
AAATTGAGCCACGCTCTTAT+AGG | + | chr8.2:74840618-74840637 | MS.gene011293:intron | 40.0% | |
AACATCAATCGGATTCTACG+AGG | - | chr8.2:74838878-74838897 | None:intergenic | 40.0% | |
AAGCAATTCAGGAAGCTTCA+CGG | + | chr8.2:74840413-74840432 | MS.gene011293:CDS | 40.0% | |
AAGTGCGTAAAAGATTGGGA+GGG | - | chr8.2:74840758-74840777 | None:intergenic | 40.0% | |
AAGTTCAGCAAGTTTACCTC+TGG | - | chr8.2:74838767-74838786 | None:intergenic | 40.0% | |
ACGGATCATGTTGATGTTGA+TGG | + | chr8.2:74838552-74838571 | MS.gene011293:CDS | 40.0% | |
ACTTGACGTTGAGTTTCTTG+AGG | - | chr8.2:74841919-74841938 | None:intergenic | 40.0% | |
AGAAGACTTAAGAGAGCTGA+TGG | - | chr8.2:74840833-74840852 | None:intergenic | 40.0% | |
AGAAGGTTAGGAATAAAGGC+GGG | + | chr8.2:74838424-74838443 | MS.gene011293:CDS | 40.0% | |
AGACAAGGTCAGGATTGTTA+AGG | - | chr8.2:74841193-74841212 | None:intergenic | 40.0% | |
AGTAGGATATTCCTCTCTGA+AGG | - | chr8.2:74840672-74840691 | None:intergenic | 40.0% | |
CAAGAGGAGGATTAATCCTT+TGG | + | chr8.2:74837776-74837795 | MS.gene011293:CDS | 40.0% | |
CAAGATCCCATCAATCAATC+TGG | - | chr8.2:74841412-74841431 | None:intergenic | 40.0% | |
CAAGCCTGATGCTAAAAAGA+AGG | + | chr8.2:74838722-74838741 | MS.gene011293:CDS | 40.0% | |
CACCACATCTAATGATGTTG+AGG | - | chr8.2:74839607-74839626 | None:intergenic | 40.0% | |
CAGTGACATGTAAGATGAAG+TGG | - | chr8.2:74841118-74841137 | None:intergenic | 40.0% | |
CCAACAAATAAGACAAGGTC+AGG | - | chr8.2:74841203-74841222 | None:intergenic | 40.0% | |
CGGATCATGTTGATGTTGAT+GGG | + | chr8.2:74838553-74838572 | MS.gene011293:CDS | 40.0% | |
CTACACCCAGATTGATTGAT+GGG | + | chr8.2:74841403-74841422 | MS.gene011293:CDS | 40.0% | |
CTCAACATCATTAGATGTGG+TGG | + | chr8.2:74839605-74839624 | MS.gene011293:intron | 40.0% | |
CTGATGCTAAAAAGAAGGGT+TGG | + | chr8.2:74838727-74838746 | MS.gene011293:CDS | 40.0% | |
CTGGAGCCCAATAATGAAAT+GGG | - | chr8.2:74840917-74840936 | None:intergenic | 40.0% | |
GAGCTGCTTATTCTCTCAAA+TGG | + | chr8.2:74837911-74837930 | MS.gene011293:CDS | 40.0% | |
GATTCGATCTTGTCTTCTAG+AGG | + | chr8.2:74837849-74837868 | MS.gene011293:CDS | 40.0% | |
GCTTGTGATACATTTCGATC+AGG | + | chr8.2:74840216-74840235 | MS.gene011293:CDS | 40.0% | |
GGATCATGTTGATGTTGATG+GGG | + | chr8.2:74838554-74838573 | MS.gene011293:CDS | 40.0% | |
GGCGTTCTATTGACATATTG+AGG | + | chr8.2:74839953-74839972 | MS.gene011293:CDS | 40.0% | |
GTACTATCTCTTGACAGCAA+AGG | - | chr8.2:74840967-74840986 | None:intergenic | 40.0% | |
TAAAAAGCAAGCCCGACATA+CGG | - | chr8.2:74840112-74840131 | None:intergenic | 40.0% | |
TAAGTGCGTAAAAGATTGGG+AGG | - | chr8.2:74840759-74840778 | None:intergenic | 40.0% | |
TAATGAAATGGGCCATGAAG+AGG | - | chr8.2:74840906-74840925 | None:intergenic | 40.0% | |
TAGAAACAAAACCTGCACTG+TGG | - | chr8.2:74839801-74839820 | None:intergenic | 40.0% | |
TAGACTCATGACCAAGAATG+TGG | + | chr8.2:74839570-74839589 | MS.gene011293:CDS | 40.0% | |
TCACGAGGAAAATGGAAACA+GGG | - | chr8.2:74839315-74839334 | None:intergenic | 40.0% | |
TCAGCTTTCAAAGTTCAACC+AGG | + | chr8.2:74841253-74841272 | MS.gene011293:CDS | 40.0% | |
TCTTACAATTACGATGCACC+TGG | + | chr8.2:74837889-74837908 | MS.gene011293:CDS | 40.0% | |
TGAAAAAGATCCTGCTGTTG+TGG | + | chr8.2:74840384-74840403 | MS.gene011293:CDS | 40.0% | |
TGAGAAGCTATGTGAATCAG+TGG | + | chr8.2:74839727-74839746 | MS.gene011293:CDS | 40.0% | |
TGATTATGCAGGTTGCTTAC+TGG | + | chr8.2:74840160-74840179 | MS.gene011293:intron | 40.0% | |
TGTAAATAGGCTCCAGAAGA+AGG | + | chr8.2:74838407-74838426 | MS.gene011293:CDS | 40.0% | |
TGTGGCAAAAGAAGCAATTC+AGG | + | chr8.2:74840402-74840421 | MS.gene011293:CDS | 40.0% | |
TTCATGCTGCAAAAGAGCAA+AGG | + | chr8.2:74839980-74839999 | MS.gene011293:CDS | 40.0% | |
TTGGTTATCTGTTAGGAACC+CGG | + | chr8.2:74840561-74840580 | MS.gene011293:intron | 40.0% | |
! | AAGGTAGATCAGCTTTGACA+GGG | - | chr8.2:74841174-74841193 | None:intergenic | 40.0% |
! | ACATGTCACTGATGGTTTTC+AGG | + | chr8.2:74841127-74841146 | MS.gene011293:intron | 40.0% |
! | CATTTATTGGTTGGCTAGGA+CGG | + | chr8.2:74841523-74841542 | MS.gene011293:intron | 40.0% |
! | CTTATTTGTTGGAGAAGCAC+TGG | + | chr8.2:74841211-74841230 | MS.gene011293:CDS | 40.0% |
! | GATTTGCTTGCTGCTGTTAA+GGG | + | chr8.2:74838006-74838025 | MS.gene011293:CDS | 40.0% |
! | GGTTTGAAGAATGATGGTGA+TGG | + | chr8.2:74838240-74838259 | MS.gene011293:CDS | 40.0% |
! | TAAGGTAGATCAGCTTTGAC+AGG | - | chr8.2:74841175-74841194 | None:intergenic | 40.0% |
! | TCTGGAGCCCAATAATGAAA+TGG | - | chr8.2:74840918-74840937 | None:intergenic | 40.0% |
! | TGTTTCCATTTTCCTCGTGA+CGG | + | chr8.2:74839315-74839334 | MS.gene011293:intron | 40.0% |
!! | CAACCCTTCTTTTTAGCATC+AGG | - | chr8.2:74838729-74838748 | None:intergenic | 40.0% |
!! | CCTGACCTTGTCTTATTTGT+TGG | + | chr8.2:74841200-74841219 | MS.gene011293:CDS | 40.0% |
!! | TAAAAGATTGGGAGGGTATC+TGG | - | chr8.2:74840751-74840770 | None:intergenic | 40.0% |
!! | TGATTTGCTTGCTGCTGTTA+AGG | + | chr8.2:74838005-74838024 | MS.gene011293:CDS | 40.0% |
!! | TTGAGAAGTAACGGTGTTGT+TGG | + | chr8.2:74838330-74838349 | MS.gene011293:CDS | 40.0% |
!! | TTTAAGGAGCGTCTTCACAA+TGG | - | chr8.2:74841942-74841961 | None:intergenic | 40.0% |
AAACAGCAGGTGACATGGAA+GGG | + | chr8.2:74838168-74838187 | MS.gene011293:CDS | 45.0% | |
AACAGACGCTGTTGTAACCA+AGG | + | chr8.2:74838458-74838477 | MS.gene011293:CDS | 45.0% | |
AAGGATATCTTCCACAGTGC+AGG | + | chr8.2:74839787-74839806 | MS.gene011293:CDS | 45.0% | |
AGAGCTGATGGTTAATGACG+TGG | - | chr8.2:74840821-74840840 | None:intergenic | 45.0% | |
AGAGTATACCCTCCAAGGTT+TGG | + | chr8.2:74840853-74840872 | MS.gene011293:intron | 45.0% | |
AGTCGGCATCAAATGTCGAT+AGG | - | chr8.2:74839832-74839851 | None:intergenic | 45.0% | |
ATAGGAAACAGCAGGTGACA+TGG | + | chr8.2:74838163-74838182 | MS.gene011293:CDS | 45.0% | |
ATAGGCTCCAGAAGAAGGTT+AGG | + | chr8.2:74838412-74838431 | MS.gene011293:CDS | 45.0% | |
ATGCTTGTGCTCAGTATTGC+TGG | + | chr8.2:74839493-74839512 | MS.gene011293:intron | 45.0% | |
ATGGGGATGCTGATAAGGAT+AGG | + | chr8.2:74838571-74838590 | MS.gene011293:CDS | 45.0% | |
ATTCAGGAAGCTTCACGGAA+TGG | + | chr8.2:74840418-74840437 | MS.gene011293:CDS | 45.0% | |
CAAGTCCGACTTCTCCAAAT+TGG | - | chr8.2:74839524-74839543 | None:intergenic | 45.0% | |
CAATTTGGAGAAGTCGGACT+TGG | + | chr8.2:74839522-74839541 | MS.gene011293:CDS | 45.0% | |
CCACAATCTGATCCTCTTCA+TGG | + | chr8.2:74840891-74840910 | MS.gene011293:intron | 45.0% | |
CCATCAATCAATCTGGGTGT+AGG | - | chr8.2:74841405-74841424 | None:intergenic | 45.0% | |
CCATGAAGAGGATCAGATTG+TGG | - | chr8.2:74840894-74840913 | None:intergenic | 45.0% | |
CCTACACCCAGATTGATTGA+TGG | + | chr8.2:74841402-74841421 | MS.gene011293:CDS | 45.0% | |
CTGAAACAGTGATAGAGCTC+TGG | - | chr8.2:74840936-74840955 | None:intergenic | 45.0% | |
GAAGGCCAATTTGGAGAAGT+CGG | + | chr8.2:74839516-74839535 | MS.gene011293:CDS | 45.0% | |
GACGAAGACCCAATTGTAGT+TGG | - | chr8.2:74841310-74841329 | None:intergenic | 45.0% | |
GACGTTGAGTTTCTTGAGGT+CGG | - | chr8.2:74841915-74841934 | None:intergenic | 45.0% | |
GAGGATCAGATTGTGGATAC+TGG | - | chr8.2:74840887-74840906 | None:intergenic | 45.0% | |
GAGTATACCCTCCAAGGTTT+GGG | + | chr8.2:74840854-74840873 | MS.gene011293:intron | 45.0% | |
GAGTTTCTTGAGGTCGGTAT+AGG | - | chr8.2:74841909-74841928 | None:intergenic | 45.0% | |
GCAGTTGAAGATTGAAGCTG+AGG | + | chr8.2:74838092-74838111 | MS.gene011293:CDS | 45.0% | |
GGATGCTGATAAGGATAGGA+AGG | + | chr8.2:74838575-74838594 | MS.gene011293:CDS | 45.0% | |
GGTTAATGACGTGGCATTAG+AGG | - | chr8.2:74840812-74840831 | None:intergenic | 45.0% | |
GTCACGAGGAAAATGGAAAC+AGG | - | chr8.2:74839316-74839335 | None:intergenic | 45.0% | |
GTCGGCATCAAATGTCGATA+GGG | - | chr8.2:74839831-74839850 | None:intergenic | 45.0% | |
GTTAGGAATAAAGGCGGGAA+TGG | + | chr8.2:74838429-74838448 | MS.gene011293:CDS | 45.0% | |
TAGGAACCCGGGATTAATAC+CGG | + | chr8.2:74840573-74840592 | MS.gene011293:intron | 45.0% | |
TATTGCTGGGAAGGCCAATT+TGG | + | chr8.2:74839507-74839526 | MS.gene011293:CDS | 45.0% | |
TCCTTCAGAGCTTTCAAAGC+TGG | - | chr8.2:74839550-74839569 | None:intergenic | 45.0% | |
TGCTTGTGCTCAGTATTGCT+GGG | + | chr8.2:74839494-74839513 | MS.gene011293:intron | 45.0% | |
TGGTTATCTGTTAGGAACCC+GGG | + | chr8.2:74840562-74840581 | MS.gene011293:intron | 45.0% | |
TGTTAAGGGTGAATTCTCGC+AGG | + | chr8.2:74838020-74838039 | MS.gene011293:CDS | 45.0% | |
TTCATTCAGTTAGGCGGAGT+AGG | - | chr8.2:74840689-74840708 | None:intergenic | 45.0% | |
TTGAGAGAATAAGCAGCTCC+AGG | - | chr8.2:74837910-74837929 | None:intergenic | 45.0% | |
TTTGACAGGGCTCTCATCAA+TGG | - | chr8.2:74841161-74841180 | None:intergenic | 45.0% | |
! | ATCTCGATACACAGTTCTGG+TGG | - | chr8.2:74838055-74838074 | None:intergenic | 45.0% |
! | GGTTTTCATCCATGTTCCAG+AGG | + | chr8.2:74838748-74838767 | MS.gene011293:CDS | 45.0% |
! | GTTGCTTTCCTATAAGAGCG+TGG | - | chr8.2:74840629-74840648 | None:intergenic | 45.0% |
! | TCTCGATACACAGTTCTGGT+GGG | - | chr8.2:74838054-74838073 | None:intergenic | 45.0% |
! | TGTTGATGGGGATGCTGATA+AGG | + | chr8.2:74838566-74838585 | MS.gene011293:CDS | 45.0% |
!! | ACCAGCTTTGAAAGCTCTGA+AGG | + | chr8.2:74839546-74839565 | MS.gene011293:CDS | 45.0% |
!! | CTTCTAGAGTATACCCTCCA+AGG | + | chr8.2:74840848-74840867 | MS.gene011293:intron | 45.0% |
!! | GAAAGTCAGGAAAGGTGTTG+AGG | + | chr8.2:74839163-74839182 | MS.gene011293:intron | 45.0% |
!! | GCAAGTTTACCTCTGGAACA+TGG | - | chr8.2:74838760-74838779 | None:intergenic | 45.0% |
!! | TTTGTTGGAGAAGCACTGGT+TGG | + | chr8.2:74841215-74841234 | MS.gene011293:CDS | 45.0% |
!!! | GGGCTTGCTTTTTAACCTGA+AGG | + | chr8.2:74840118-74840137 | MS.gene011293:intron | 45.0% |
AACCAAGGCTGAGCCGAAAA+AGG | + | chr8.2:74838473-74838492 | MS.gene011293:CDS | 50.0% | |
AGGTGGGAATAGGAAACAGC+AGG | + | chr8.2:74838155-74838174 | MS.gene011293:CDS | 50.0% | |
CAATCTGGGTGTAGGAGATG+TGG | - | chr8.2:74841397-74841416 | None:intergenic | 50.0% | |
CCAGTCATGTTTGTGGGATG+CGG | + | chr8.2:74841878-74841897 | MS.gene011293:CDS | 50.0% | |
CGAATCCTGTGGTTGTAGGT+GGG | + | chr8.2:74838139-74838158 | MS.gene011293:CDS | 50.0% | |
CGATACCGTCACGAGGAAAA+TGG | - | chr8.2:74839323-74839342 | None:intergenic | 50.0% | |
CTATTCCCACCTACAACCAC+AGG | - | chr8.2:74838147-74838166 | None:intergenic | 50.0% | |
CTGTGGTTGTAGGTGGGAAT+AGG | + | chr8.2:74838145-74838164 | MS.gene011293:CDS | 50.0% | |
GAAACAGCAGGTGACATGGA+AGG | + | chr8.2:74838167-74838186 | MS.gene011293:CDS | 50.0% | |
GGAAGCTTCACGGAATGGTT+CGG | + | chr8.2:74840423-74840442 | MS.gene011293:CDS | 50.0% | |
GGAGCTCCAGTCATGTTTGT+GGG | + | chr8.2:74841872-74841891 | MS.gene011293:CDS | 50.0% | |
GGATCTGACGGGAAGAAGAA+TGG | + | chr8.2:74838195-74838214 | MS.gene011293:CDS | 50.0% | |
GGCGAAATACATGGGTGAGA+TGG | - | chr8.2:74841686-74841705 | None:intergenic | 50.0% | |
GGCGGTGGTTTGAAGAATGA+TGG | + | chr8.2:74838234-74838253 | MS.gene011293:CDS | 50.0% | |
TCAGTGGCAGCAAGTCTTGA+AGG | + | chr8.2:74839743-74839762 | MS.gene011293:CDS | 50.0% | |
TCGAATCCTGTGGTTGTAGG+TGG | + | chr8.2:74838138-74838157 | MS.gene011293:CDS | 50.0% | |
TGGAAGGGAGATGGATCTGA+CGG | + | chr8.2:74838183-74838202 | MS.gene011293:CDS | 50.0% | |
TGGAGCTCCAGTCATGTTTG+TGG | + | chr8.2:74841871-74841890 | MS.gene011293:CDS | 50.0% | |
TGTGCTCAGTATTGCTGGGA+AGG | + | chr8.2:74839498-74839517 | MS.gene011293:intron | 50.0% | |
! | AAGAAGAATGGCAGTGCTGG+TGG | + | chr8.2:74838207-74838226 | MS.gene011293:CDS | 50.0% |
! | ATTCCTCTCTGAAGGAGCCT+TGG | - | chr8.2:74840664-74840683 | None:intergenic | 50.0% |
! | GCTTCTTTTGCCACAACAGC+AGG | - | chr8.2:74840397-74840416 | None:intergenic | 50.0% |
! | GGAACAAGGGGAGAGTATGA+TGG | + | chr8.2:74838614-74838633 | MS.gene011293:CDS | 50.0% |
! | GTTGAGGTCAGGGGCATATA+TGG | + | chr8.2:74839179-74839198 | MS.gene011293:intron | 50.0% |
! | TGTCTTCTAGAGGAGCGATC+TGG | + | chr8.2:74837859-74837878 | MS.gene011293:CDS | 50.0% |
!! | AGGAAAGGTGTTGAGGTCAG+GGG | + | chr8.2:74839170-74839189 | MS.gene011293:intron | 50.0% |
!! | CAGGAAAGGTGTTGAGGTCA+GGG | + | chr8.2:74839169-74839188 | MS.gene011293:intron | 50.0% |
!! | TCAGGAAAGGTGTTGAGGTC+AGG | + | chr8.2:74839168-74839187 | MS.gene011293:intron | 50.0% |
!! | TCTGTGTCACTTGTAGGCTG+AGG | + | chr8.2:74839697-74839716 | MS.gene011293:intron | 50.0% |
!!! | TACCTTTTTCGGCTCAGCCT+TGG | - | chr8.2:74838478-74838497 | None:intergenic | 50.0% |
AGGGAAGGGGGCGAAATACA+TGG | - | chr8.2:74841695-74841714 | None:intergenic | 55.0% | |
CAGGAGCTGTTGAGCAGTTG+CGG | + | chr8.2:74840235-74840254 | MS.gene011293:CDS | 55.0% | |
CAGGTGACATGGAAGGGAGA+TGG | + | chr8.2:74838174-74838193 | MS.gene011293:CDS | 55.0% | |
CCCACATCCCAAACCTTGGA+GGG | - | chr8.2:74840864-74840883 | None:intergenic | 55.0% | |
CCGCATCCCACAAACATGAC+TGG | - | chr8.2:74841881-74841900 | None:intergenic | 55.0% | |
GACTCATGCACGCAGACTTC+AGG | + | chr8.2:74840257-74840276 | MS.gene011293:CDS | 55.0% | |
GGAAGGGAGATGGATCTGAC+GGG | + | chr8.2:74838184-74838203 | MS.gene011293:CDS | 55.0% | |
GGGAAGAAGAATGGCAGTGC+TGG | + | chr8.2:74838204-74838223 | MS.gene011293:CDS | 55.0% | |
GGGAAGGGGGCGAAATACAT+GGG | - | chr8.2:74841694-74841713 | None:intergenic | 55.0% | |
GGTGGGAGCTGCACTTTCAA+TGG | + | chr8.2:74841838-74841857 | MS.gene011293:intron | 55.0% | |
GTTGTGCTAGTCGACACAGC+TGG | + | chr8.2:74840448-74840467 | MS.gene011293:CDS | 55.0% | |
TCCTCGTGACGGTATCGTCT+GGG | + | chr8.2:74839326-74839345 | MS.gene011293:intron | 55.0% | |
TGGGTGTAGGAGATGTGGAG+AGG | - | chr8.2:74841392-74841411 | None:intergenic | 55.0% | |
TTCCTCGTGACGGTATCGTC+TGG | + | chr8.2:74839325-74839344 | MS.gene011293:intron | 55.0% | |
! | ACCCTCCAAGGTTTGGGATG+TGG | + | chr8.2:74840860-74840879 | MS.gene011293:intron | 55.0% |
! | CCCTCCAAGGTTTGGGATGT+GGG | + | chr8.2:74840861-74840880 | MS.gene011293:intron | 55.0% |
!! | AAGAATGGCAGTGCTGGTGG+CGG | + | chr8.2:74838210-74838229 | MS.gene011293:CDS | 55.0% |
CCTCGTGACGGTATCGTCTG+GGG | + | chr8.2:74839327-74839346 | MS.gene011293:intron | 60.0% | |
CGACACAGCTGGTCGTATGC+AGG | + | chr8.2:74840459-74840478 | MS.gene011293:CDS | 60.0% | |
CTGGCCCACATCCCAAACCT+TGG | - | chr8.2:74840868-74840887 | None:intergenic | 60.0% | |
GAGCCAAGGCTCCTTCAGAG+AGG | + | chr8.2:74840658-74840677 | MS.gene011293:intron | 60.0% | |
GCAACAGACCACCTGAGCCA+AGG | + | chr8.2:74840644-74840663 | MS.gene011293:intron | 60.0% | |
GCCCACATCCCAAACCTTGG+AGG | - | chr8.2:74840865-74840884 | None:intergenic | 60.0% | |
TGAAGCTGAGGCACGTGCTG+AGG | + | chr8.2:74838104-74838123 | MS.gene011293:CDS | 60.0% | |
TGAAGGAGCCTTGGCTCAGG+TGG | - | chr8.2:74840655-74840674 | None:intergenic | 60.0% | |
! | CTCTGAAGGAGCCTTGGCTC+AGG | - | chr8.2:74840658-74840677 | None:intergenic | 60.0% |
CCCCAGACGATACCGTCACG+AGG | - | chr8.2:74839330-74839349 | None:intergenic | 65.0% | |
GGCGGCAATGGAAGACGCAC+TGG | + | chr8.2:74839912-74839931 | MS.gene011293:intron | 65.0% | |
!! | AATGGCAGTGCTGGTGGCGG+CGG | + | chr8.2:74838213-74838232 | MS.gene011293:CDS | 65.0% |
!!! | AGTGCTGGTGGCGGCGGCGG+TGG | + | chr8.2:74838219-74838238 | MS.gene011293:CDS | 80.0% |
!!! | GGCAGTGCTGGTGGCGGCGG+CGG | + | chr8.2:74838216-74838235 | MS.gene011293:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 74837751 | 74841964 | 74837751 | ID=MS.gene011293 |
chr8.2 | mRNA | 74837751 | 74841964 | 74837751 | ID=MS.gene011293.t1;Parent=MS.gene011293 |
chr8.2 | exon | 74837751 | 74838769 | 74837751 | ID=MS.gene011293.t1.exon1;Parent=MS.gene011293.t1 |
chr8.2 | CDS | 74837751 | 74838769 | 74837751 | ID=cds.MS.gene011293.t1;Parent=MS.gene011293.t1 |
chr8.2 | exon | 74839507 | 74839591 | 74839507 | ID=MS.gene011293.t1.exon2;Parent=MS.gene011293.t1 |
chr8.2 | CDS | 74839507 | 74839591 | 74839507 | ID=cds.MS.gene011293.t1;Parent=MS.gene011293.t1 |
chr8.2 | exon | 74839713 | 74839808 | 74839713 | ID=MS.gene011293.t1.exon3;Parent=MS.gene011293.t1 |
chr8.2 | CDS | 74839713 | 74839808 | 74839713 | ID=cds.MS.gene011293.t1;Parent=MS.gene011293.t1 |
chr8.2 | exon | 74839913 | 74840065 | 74839913 | ID=MS.gene011293.t1.exon4;Parent=MS.gene011293.t1 |
chr8.2 | CDS | 74839913 | 74840065 | 74839913 | ID=cds.MS.gene011293.t1;Parent=MS.gene011293.t1 |
chr8.2 | exon | 74840171 | 74840278 | 74840171 | ID=MS.gene011293.t1.exon5;Parent=MS.gene011293.t1 |
chr8.2 | CDS | 74840171 | 74840278 | 74840171 | ID=cds.MS.gene011293.t1;Parent=MS.gene011293.t1 |
chr8.2 | exon | 74840361 | 74840480 | 74840361 | ID=MS.gene011293.t1.exon6;Parent=MS.gene011293.t1 |
chr8.2 | CDS | 74840361 | 74840480 | 74840361 | ID=cds.MS.gene011293.t1;Parent=MS.gene011293.t1 |
chr8.2 | exon | 74841149 | 74841274 | 74841149 | ID=MS.gene011293.t1.exon7;Parent=MS.gene011293.t1 |
chr8.2 | CDS | 74841149 | 74841274 | 74841149 | ID=cds.MS.gene011293.t1;Parent=MS.gene011293.t1 |
chr8.2 | exon | 74841378 | 74841461 | 74841378 | ID=MS.gene011293.t1.exon8;Parent=MS.gene011293.t1 |
chr8.2 | CDS | 74841378 | 74841461 | 74841378 | ID=cds.MS.gene011293.t1;Parent=MS.gene011293.t1 |
chr8.2 | exon | 74841839 | 74841964 | 74841839 | ID=MS.gene011293.t1.exon9;Parent=MS.gene011293.t1 |
chr8.2 | CDS | 74841839 | 74841964 | 74841839 | ID=cds.MS.gene011293.t1;Parent=MS.gene011293.t1 |
Gene Sequence |
Protein sequence |