Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene012546.t1 | XP_003610309.1 | 95 | 636 | 27 | 2 | 1 | 636 | 1 | 631 | 5.40E-306 | 1059.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene012546.t1 | Q54ZR7 | 44.8 | 647 | 312 | 11 | 1 | 635 | 1 | 614 | 2.5e-110 | 401.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene012546.t1 | G7JGN9 | 95.0 | 636 | 27 | 2 | 1 | 636 | 1 | 631 | 3.9e-306 | 1059.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene012546 | MS.gene012490 | PPI |
MS.gene012546 | MS.gene91547 | PPI |
MS.gene012546 | MS.gene73119 | PPI |
MS.gene005189 | MS.gene012546 | PPI |
MS.gene012546 | MS.gene52620 | PPI |
MS.gene44056 | MS.gene012546 | PPI |
MS.gene012546 | MS.gene035629 | PPI |
MS.gene012546 | MS.gene064542 | PPI |
MS.gene40741 | MS.gene012546 | PPI |
MS.gene035805 | MS.gene012546 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene012546.t1 | MTR_4g130770 | 97.642 | 636 | 10 | 2 | 1 | 636 | 1 | 631 | 0.0 | 1261 |
MS.gene012546.t1 | MTR_4g010050 | 30.962 | 239 | 147 | 3 | 397 | 635 | 75 | 295 | 1.12e-30 | 126 |
MS.gene012546.t1 | MTR_7g104890 | 34.536 | 194 | 116 | 2 | 430 | 623 | 33 | 215 | 3.53e-30 | 124 |
MS.gene012546.t1 | MTR_7g104890 | 28.082 | 292 | 192 | 4 | 332 | 623 | 75 | 348 | 8.48e-30 | 124 |
MS.gene012546.t1 | MTR_2g104050 | 30.544 | 239 | 148 | 3 | 397 | 635 | 75 | 295 | 1.47e-29 | 122 |
MS.gene012546.t1 | MTR_8g032340 | 27.517 | 298 | 185 | 8 | 348 | 635 | 94 | 370 | 4.17e-19 | 90.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene012546.t1 | AT4G30600 | 75.307 | 652 | 127 | 14 | 1 | 636 | 1 | 634 | 0.0 | 887 |
MS.gene012546.t1 | AT4G30600 | 75.307 | 652 | 127 | 14 | 1 | 636 | 1 | 634 | 0.0 | 887 |
MS.gene012546.t1 | AT1G48900 | 26.797 | 306 | 206 | 3 | 330 | 635 | 8 | 295 | 4.74e-32 | 129 |
MS.gene012546.t1 | AT1G48900 | 26.797 | 306 | 206 | 3 | 330 | 635 | 8 | 295 | 5.81e-32 | 130 |
MS.gene012546.t1 | AT5G03940 | 28.571 | 294 | 192 | 4 | 330 | 623 | 83 | 358 | 7.86e-32 | 130 |
MS.gene012546.t1 | AT1G15310 | 28.727 | 275 | 178 | 3 | 361 | 635 | 39 | 295 | 1.37e-31 | 129 |
MS.gene012546.t1 | AT2G45770 | 29.667 | 300 | 180 | 8 | 344 | 635 | 89 | 365 | 4.10e-27 | 114 |
MS.gene012546.t1 | AT5G49500 | 24.351 | 308 | 213 | 4 | 330 | 635 | 8 | 297 | 2.46e-23 | 104 |
MS.gene012546.t1 | AT5G49500 | 29.480 | 173 | 111 | 2 | 463 | 635 | 14 | 175 | 6.10e-20 | 92.8 |
Find 144 sgRNAs with CRISPR-Local
Find 333 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAGTTTCATCCTTTCATTTA+AGG | 0.135782 | 8.4:+3415008 | None:intergenic |
GGATAGGAAGGTTGATTATT+TGG | 0.186314 | 8.4:-3418362 | MS.gene012546:CDS |
CTTTCAATGGTTTACATATC+TGG | 0.196127 | 8.4:-3415112 | MS.gene012546:CDS |
TGATTATGCAGGTTGCTTAC+TGG | 0.239203 | 8.4:-3416788 | MS.gene012546:intron |
GTTGGTAATGTTAGTGTAAA+TGG | 0.240516 | 8.4:-3418601 | MS.gene012546:CDS |
CATAACCCTTCTCAAATATA+GGG | 0.264100 | 8.4:+3416585 | None:intergenic |
TCATAACCCTTCTCAAATAT+AGG | 0.269160 | 8.4:+3416584 | None:intergenic |
CTCTGGTCATGCAATGAAAT+TGG | 0.273870 | 8.4:-3419156 | MS.gene012546:CDS |
GTTGTATTTGTTGGAGTTAA+TGG | 0.282982 | 8.4:-3416933 | MS.gene012546:CDS |
CTTTATTCCTAACCTTCTTC+TGG | 0.284805 | 8.4:+3418530 | None:intergenic |
TATTGCTGGGAAGGCCAATT+TGG | 0.285068 | 8.4:-3417441 | MS.gene012546:CDS |
CCATATGTTGTTGTATTTGT+TGG | 0.324829 | 8.4:-3416942 | MS.gene012546:CDS |
CCTGACCTGGTCTTATTTGT+TGG | 0.326012 | 8.4:-3415726 | MS.gene012546:CDS |
CAAGTCCGACTTCTCCAAAT+TGG | 0.330709 | 8.4:+3417427 | None:intergenic |
AACCAAGGCTGAGCCGAAAA+AGG | 0.357649 | 8.4:-3418476 | MS.gene012546:CDS |
GACTCATGCACGCAGACTTC+AGG | 0.360707 | 8.4:-3416691 | MS.gene012546:intron |
ATGCTTGTGCTCAGTATTGC+TGG | 0.365590 | 8.4:-3417455 | MS.gene012546:intron |
CAAGATCCCATCAATCAATC+TGG | 0.383740 | 8.4:+3415517 | None:intergenic |
GAGTTTCTTGAGGTCGGTAT+AGG | 0.387081 | 8.4:+3415057 | None:intergenic |
CAGAAGAAGGTTAGGAATAA+AGG | 0.388438 | 8.4:-3418529 | MS.gene012546:CDS |
ACGGATCATGTTGATGTTGA+TGG | 0.394256 | 8.4:-3418397 | MS.gene012546:CDS |
GGTGGGAGCTGCACTTTCAA+TGG | 0.401497 | 8.4:-3415125 | MS.gene012546:CDS |
CGGTGGTTGTAGGTGGGAAT+AGG | 0.404012 | 8.4:-3418804 | MS.gene012546:CDS |
TTTGACAGTGCTCTCATCAA+TGG | 0.412182 | 8.4:+3415768 | None:intergenic |
ATAAATACATACCACATTCT+TGG | 0.414415 | 8.4:+3417367 | None:intergenic |
TCCTTCAGAGCTTTCAAAGC+TGG | 0.420133 | 8.4:+3417401 | None:intergenic |
TTGAGGAGTAACGGTGTTGT+TGG | 0.422921 | 8.4:-3418619 | MS.gene012546:CDS |
CCAACAAATACAACAACATA+TGG | 0.423685 | 8.4:+3416942 | None:intergenic |
GCCAGTGCTGGTGGTGGTGG+CGG | 0.424543 | 8.4:-3418733 | MS.gene012546:CDS |
TGTGGCAAAAGAAGCAATTC+AGG | 0.429961 | 8.4:-3416546 | MS.gene012546:CDS |
AAATCTAACTTAGTTTCAAC+GGG | 0.430928 | 8.4:+3418421 | None:intergenic |
TAGTGACAGTGAGGATGAAG+AGG | 0.435461 | 8.4:-3418293 | MS.gene012546:CDS |
CAATTTGGAGAAGTCGGACT+TGG | 0.441725 | 8.4:-3417426 | MS.gene012546:CDS |
AAATCGAATCCGGTGGTTGT+AGG | 0.450153 | 8.4:-3418814 | MS.gene012546:CDS |
GTTCGACACTATTGATGATA+AGG | 0.450965 | 8.4:-3415486 | MS.gene012546:intron |
AATGCCAGTGCTGGTGGTGG+TGG | 0.452714 | 8.4:-3418736 | MS.gene012546:CDS |
ACCGCCACCACCACCAGCAC+TGG | 0.454509 | 8.4:+3418732 | None:intergenic |
CGTTCTGTTATTGTGAATAA+CGG | 0.459586 | 8.4:-3418655 | MS.gene012546:CDS |
TGTTGATGGGGATGCTGATA+AGG | 0.462630 | 8.4:-3418383 | MS.gene012546:CDS |
GGAAGCTTCACGGAATGGTT+CGG | 0.463640 | 8.4:-3416525 | MS.gene012546:CDS |
ATAGGCTCCAGAAGAAGGTT+AGG | 0.465195 | 8.4:-3418537 | MS.gene012546:CDS |
AGTGCTGGTGGTGGTGGCGG+TGG | 0.465276 | 8.4:-3418730 | MS.gene012546:CDS |
TCAGTGGCTGCAAGTCTTGA+AGG | 0.467409 | 8.4:-3417205 | MS.gene012546:CDS |
GGCGTTCTATTGACATATTG+AGG | 0.470946 | 8.4:-3416995 | MS.gene012546:CDS |
CAAGAGGAGGATTAATCCTC+TGG | 0.471238 | 8.4:-3419173 | MS.gene012546:CDS |
CCTACACCCAGATTGATTGA+TGG | 0.472241 | 8.4:-3415524 | MS.gene012546:CDS |
CGGATCATGTTGATGTTGAT+GGG | 0.473173 | 8.4:-3418396 | MS.gene012546:CDS |
GAAGGTTGATTATTTGGCTA+AGG | 0.473509 | 8.4:-3418356 | MS.gene012546:CDS |
TGGAGCTCCAGTCATGTTTG+TGG | 0.474210 | 8.4:-3415092 | MS.gene012546:CDS |
CCAACAAATAAGACCAGGTC+AGG | 0.474859 | 8.4:+3415726 | None:intergenic |
TTTGTTGGAGTTAATGGAGT+TGG | 0.477015 | 8.4:-3416927 | MS.gene012546:CDS |
TGGAAGGGAGATGGATCTGA+TGG | 0.483093 | 8.4:-3418766 | MS.gene012546:CDS |
AAGGATATCTTCCACAGTGC+AGG | 0.486091 | 8.4:-3417161 | MS.gene012546:intron |
AAAATCTCGATACACGGTTC+TGG | 0.486570 | 8.4:+3418894 | None:intergenic |
AAAATCTAACTTAGTTTCAA+CGG | 0.490122 | 8.4:+3418420 | None:intergenic |
GAGCTGCTTATTCTCTCAAA+TGG | 0.492519 | 8.4:-3419038 | MS.gene012546:CDS |
ATGGGGATGCTGATAAGGAT+AGG | 0.493111 | 8.4:-3418378 | MS.gene012546:CDS |
CTTATTTGTTGGAGAAGCAC+TGG | 0.493495 | 8.4:-3415715 | MS.gene012546:CDS |
GCTTGTGATACATTTCGATC+AGG | 0.496091 | 8.4:-3416732 | MS.gene012546:CDS |
GTTAGGAATAAAGGCGGGAA+TGG | 0.496788 | 8.4:-3418520 | MS.gene012546:CDS |
TGTAAATAGGCTCCAGAAGA+AGG | 0.499134 | 8.4:-3418542 | MS.gene012546:CDS |
ATCTCGATACACGGTTCTGG+TGG | 0.501240 | 8.4:+3418897 | None:intergenic |
GATGATGAGGATGATGATGC+TGG | 0.501399 | 8.4:-3418265 | MS.gene012546:CDS |
GCGTTCTATTGACATATTGA+GGG | 0.507989 | 8.4:-3416994 | MS.gene012546:CDS |
AGACCAGGTCAGGATTGTTA+AGG | 0.512658 | 8.4:+3415736 | None:intergenic |
CTATTCCCACCTACAACCAC+CGG | 0.515311 | 8.4:+3418805 | None:intergenic |
CCAGTCATGTTTGTGGGATG+CGG | 0.515363 | 8.4:-3415085 | MS.gene012546:CDS |
TCAGATCCCTATATTTGAGA+AGG | 0.520704 | 8.4:-3416591 | MS.gene012546:intron |
CTACACCCAGATTGATTGAT+GGG | 0.521118 | 8.4:-3415523 | MS.gene012546:CDS |
ACGGTAACGGTTATAATTTG+AGG | 0.521482 | 8.4:-3418636 | MS.gene012546:CDS |
CAGGAGCTGTTGAGCAGTTG+CGG | 0.524608 | 8.4:-3416713 | MS.gene012546:CDS |
GAAATTGGCAACGCTTTGAA+AGG | 0.527215 | 8.4:-3419141 | MS.gene012546:CDS |
GGAGCTCCAGTCATGTTTGT+GGG | 0.528002 | 8.4:-3415091 | MS.gene012546:CDS |
CAGATCCCTATATTTGAGAA+GGG | 0.528857 | 8.4:-3416590 | MS.gene012546:CDS |
GACGTTGAGTTTCTTGAGGT+CGG | 0.531116 | 8.4:+3415051 | None:intergenic |
AAGCAATTCAGGAAGCTTCA+CGG | 0.533244 | 8.4:-3416535 | MS.gene012546:CDS |
GGCGGCAATGGAAGATGCAC+TGG | 0.533895 | 8.4:-3417036 | MS.gene012546:CDS |
CGACACAGCTGGTCGTATGC+AGG | 0.535402 | 8.4:-3416489 | MS.gene012546:intron |
ATTCAGGAAGCTTCACGGAA+TGG | 0.540152 | 8.4:-3416530 | MS.gene012546:CDS |
GGAACAAGGTGAGAGTATGA+TGG | 0.543614 | 8.4:-3418335 | MS.gene012546:CDS |
TCGAATCCGGTGGTTGTAGG+TGG | 0.545919 | 8.4:-3418811 | MS.gene012546:CDS |
TGTGCTCAGTATTGCTGGGA+AGG | 0.545968 | 8.4:-3417450 | MS.gene012546:intron |
GATTCGATCTTGTCTTCTAG+AGG | 0.546611 | 8.4:-3419100 | MS.gene012546:CDS |
TGTCTTCTAGAGGAGCGATC+TGG | 0.547527 | 8.4:-3419090 | MS.gene012546:CDS |
GGATTTGAAGAAATCGAATC+CGG | 0.550640 | 8.4:-3418824 | MS.gene012546:CDS |
CAATCTGGGTGTAGGAGATG+TGG | 0.553386 | 8.4:+3415532 | None:intergenic |
AAAATCTACTAATCTTGCTA+AGG | 0.553829 | 8.4:-3416904 | MS.gene012546:intron |
CAGGTGACATGGAAGGGAGA+TGG | 0.559417 | 8.4:-3418775 | MS.gene012546:CDS |
CCGCATCCCACAAACATGAC+TGG | 0.559796 | 8.4:+3415085 | None:intergenic |
ACCAGCTTTGAAAGCTCTGA+AGG | 0.559926 | 8.4:-3417402 | MS.gene012546:CDS |
TTGAGAGAATAAGCAGCTCC+AGG | 0.560375 | 8.4:+3419042 | None:intergenic |
AAACAGCAGGTGACATGGAA+GGG | 0.561061 | 8.4:-3418781 | MS.gene012546:CDS |
GATTATTTGGCTAAGGAACA+AGG | 0.566749 | 8.4:-3418349 | MS.gene012546:CDS |
GTTATTGTGAATAACGGTAA+CGG | 0.570694 | 8.4:-3418649 | MS.gene012546:CDS |
CAATTTCATTGCATGACCAG+AGG | 0.575171 | 8.4:+3419157 | None:intergenic |
GGATGCTGATAAGGATAGGA+AGG | 0.575386 | 8.4:-3418374 | MS.gene012546:CDS |
GCAGTTGAAGATTGAAGCTG+AGG | 0.579144 | 8.4:-3418857 | MS.gene012546:CDS |
AAGATCCCATCAATCAATCT+GGG | 0.579799 | 8.4:+3415518 | None:intergenic |
CCATCAATCAATCTGGGTGT+AGG | 0.581937 | 8.4:+3415524 | None:intergenic |
TGAAGCTGAGGCTCGTTCTG+AGG | 0.584141 | 8.4:-3418845 | MS.gene012546:CDS |
ACTTGACGTTGAGTTTCTTG+AGG | 0.584980 | 8.4:+3415047 | None:intergenic |
GAAACAGCAGGTGACATGGA+AGG | 0.585391 | 8.4:-3418782 | MS.gene012546:CDS |
GGGAAGAAGAATGCCAGTGC+TGG | 0.586484 | 8.4:-3418745 | MS.gene012546:CDS |
CTGATCAAAATCTCGATACA+CGG | 0.587720 | 8.4:+3418888 | None:intergenic |
CTACCTTAACAATCCTGACC+TGG | 0.587728 | 8.4:-3415739 | MS.gene012546:CDS |
TTTGTTGGAGAAGCACTGGT+TGG | 0.588986 | 8.4:-3415711 | MS.gene012546:CDS |
GGTTATAATTTGAGGAGTAA+CGG | 0.590987 | 8.4:-3418628 | MS.gene012546:CDS |
ATAGGAAACAGCAGGTGACA+TGG | 0.591167 | 8.4:-3418786 | MS.gene012546:CDS |
GTTTGAAGAATGACGGTGAT+GGG | 0.596520 | 8.4:-3418708 | MS.gene012546:CDS |
TGTTAAGCGTGAATTCTCGC+AGG | 0.597191 | 8.4:-3418929 | MS.gene012546:CDS |
TTTAAGGAGCGTCTTCACAA+TGG | 0.598414 | 8.4:+3415024 | None:intergenic |
TGCTTGTGCTCAGTATTGCT+GGG | 0.598645 | 8.4:-3417454 | MS.gene012546:intron |
CGAATCCGGTGGTTGTAGGT+GGG | 0.598863 | 8.4:-3418810 | MS.gene012546:CDS |
AGGTGGGAATAGGAAACAGC+AGG | 0.600879 | 8.4:-3418794 | MS.gene012546:CDS |
AATTCTGCATCTGCTCTATG+TGG | 0.603688 | 8.4:-3418968 | MS.gene012546:CDS |
TGAAGAGGATGATGATGATG+AGG | 0.607270 | 8.4:-3418278 | MS.gene012546:CDS |
TTCATGCTGCAAAAGAGCAA+AGG | 0.608654 | 8.4:-3416968 | MS.gene012546:CDS |
ATGATGAGGATGATGATGCT+GGG | 0.610615 | 8.4:-3418264 | MS.gene012546:CDS |
ACACAATGTTAATGTCATGA+TGG | 0.611925 | 8.4:-3416757 | MS.gene012546:CDS |
GAGAATGATAGTGTAAACAA+TGG | 0.612652 | 8.4:-3418574 | MS.gene012546:CDS |
GATCGAATCAATGTATCGAT+CGG | 0.617091 | 8.4:+3419114 | None:intergenic |
CTTCTCCAACAAATAAGACC+AGG | 0.622372 | 8.4:+3415721 | None:intergenic |
GTTGTGCTAGTCGACACAGC+TGG | 0.625758 | 8.4:-3416500 | MS.gene012546:CDS |
TCTTACAATTACGATGCACC+TGG | 0.626789 | 8.4:-3419060 | MS.gene012546:CDS |
TCTCGATACACGGTTCTGGT+GGG | 0.628791 | 8.4:+3418898 | None:intergenic |
AACAGACGCTGTTGTAACCA+AGG | 0.629920 | 8.4:-3418491 | MS.gene012546:CDS |
AAGAATGCCAGTGCTGGTGG+TGG | 0.631319 | 8.4:-3418739 | MS.gene012546:CDS |
GGAAGGGAGATGGATCTGAT+GGG | 0.633548 | 8.4:-3418765 | MS.gene012546:CDS |
GAAGGCCAATTTGGAGAAGT+CGG | 0.633774 | 8.4:-3417432 | MS.gene012546:CDS |
GGTTTGAAGAATGACGGTGA+TGG | 0.634038 | 8.4:-3418709 | MS.gene012546:CDS |
AGAAGGTTAGGAATAAAGGC+GGG | 0.636662 | 8.4:-3418525 | MS.gene012546:CDS |
CGTTATTCACAATAACAGAA+CGG | 0.639458 | 8.4:+3418656 | None:intergenic |
GGCGGTGGTTTGAAGAATGA+CGG | 0.640321 | 8.4:-3418715 | MS.gene012546:CDS |
TGAGAAGCTATGTGAATCAG+TGG | 0.640944 | 8.4:-3417221 | MS.gene012546:CDS |
TCAGCTTTCAAAGTTCAACC+AGG | 0.642481 | 8.4:-3415673 | MS.gene012546:intron |
AAGAAGAATGCCAGTGCTGG+TGG | 0.643037 | 8.4:-3418742 | MS.gene012546:CDS |
TGGGTGTAGGAGATGTGGAA+AGG | 0.654736 | 8.4:+3415537 | None:intergenic |
TAGACTCATGACCAAGAATG+TGG | 0.655583 | 8.4:-3417378 | MS.gene012546:intron |
GGATCATGTTGATGTTGATG+GGG | 0.663445 | 8.4:-3418395 | MS.gene012546:CDS |
TTTGAAGAAATCGAATCCGG+TGG | 0.670497 | 8.4:-3418821 | MS.gene012546:CDS |
TCTAGAGGAGCGATCTGGTG+CGG | 0.676914 | 8.4:-3419085 | MS.gene012546:CDS |
AAGAAGGTTAGGAATAAAGG+CGG | 0.679488 | 8.4:-3418526 | MS.gene012546:CDS |
AATATGTCAATAGAACGCCT+AGG | 0.693947 | 8.4:+3416999 | None:intergenic |
TAGAAACCAAACCTGCACTG+TGG | 0.728001 | 8.4:+3417150 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGAAATTGTATATAAATAAA+AGG | + | chr8.4:3417124-3417143 | None:intergenic | 10.0% |
!! | ATAAATTAAATTGTTACTCT+TGG | - | chr8.4:3416496-3416515 | MS.gene012546:CDS | 15.0% |
!! | ATTGTATATAAATAAAAGGT+CGG | + | chr8.4:3417120-3417139 | None:intergenic | 15.0% |
!!! | TATTTAACTTGTAATGATAT+TGG | - | chr8.4:3416401-3416420 | MS.gene012546:intron | 15.0% |
!! | AAAAGGTAGTTAAGAAAAAT+AGG | - | chr8.4:3415760-3415779 | MS.gene012546:CDS | 20.0% |
!! | AAAATCTAACTTAGTTTCAA+CGG | + | chr8.4:3415802-3415821 | None:intergenic | 20.0% |
!! | AAAGGTAGTTAAGAAAAATA+GGG | - | chr8.4:3415761-3415780 | MS.gene012546:CDS | 20.0% |
!! | TAATCATTACCCATATTAAA+TGG | + | chr8.4:3418857-3418876 | None:intergenic | 20.0% |
!! | TATTCTTGATGAACATTTAT+TGG | - | chr8.4:3418811-3418830 | MS.gene012546:CDS | 20.0% |
!! | TCAATTCCAATAAACATAAA+AGG | + | chr8.4:3418308-3418327 | None:intergenic | 20.0% |
!!! | AAAAGTTTATTGGTTTTATG+GGG | - | chr8.4:3417778-3417797 | MS.gene012546:intron | 20.0% |
!!! | AAACAATAAAAGTATTGTCA+AGG | + | chr8.4:3416251-3416270 | None:intergenic | 20.0% |
!!! | AATGAACCTTTTATGTTTAT+TGG | - | chr8.4:3418299-3418318 | MS.gene012546:CDS | 20.0% |
!!! | CAAAAGTTTATTGGTTTTAT+GGG | - | chr8.4:3417777-3417796 | MS.gene012546:intron | 20.0% |
!!! | TAATTATGTTTGATTTTGTC+AGG | - | chr8.4:3419073-3419092 | MS.gene012546:CDS | 20.0% |
!!! | TGAAACTAAGTTAGATTTTA+CGG | - | chr8.4:3415803-3415822 | MS.gene012546:intron | 20.0% |
!!! | TTTTATGTTTATTGGAATTG+AGG | - | chr8.4:3418307-3418326 | MS.gene012546:CDS | 20.0% |
!!! | TTTTTCTTAACTACCTTTTT+CGG | + | chr8.4:3415759-3415778 | None:intergenic | 20.0% |
! | AAAATCTACTAATCTTGCTA+AGG | - | chr8.4:3417315-3417334 | MS.gene012546:intron | 25.0% |
! | AAATCTAACTTAGTTTCAAC+GGG | + | chr8.4:3415801-3415820 | None:intergenic | 25.0% |
! | AACTAGCAAAGACAAAATAA+AGG | + | chr8.4:3418969-3418988 | None:intergenic | 25.0% |
! | ACTAGCAAAGACAAAATAAA+GGG | + | chr8.4:3418968-3418987 | None:intergenic | 25.0% |
! | AGACAAAAAAATCCAATTCA+AGG | + | chr8.4:3416203-3416222 | None:intergenic | 25.0% |
! | AGTGTTATATTTCCTTGAAT+TGG | - | chr8.4:3416188-3416207 | MS.gene012546:intron | 25.0% |
! | AGTTAAGAAAAATAGGGTTT+GGG | - | chr8.4:3415767-3415786 | MS.gene012546:CDS | 25.0% |
! | AGTTTCTGCAACAAAATAAA+TGG | + | chr8.4:3418656-3418675 | None:intergenic | 25.0% |
! | ATAAATACATACCACATTCT+TGG | + | chr8.4:3416855-3416874 | None:intergenic | 25.0% |
! | CAACTTTGCAAGTAAATTTA+TGG | - | chr8.4:3418775-3418794 | MS.gene012546:CDS | 25.0% |
! | GAATAAGTGCATAAAAGATT+GGG | + | chr8.4:3418032-3418051 | None:intergenic | 25.0% |
! | GTTTCTGCAACAAAATAAAT+GGG | + | chr8.4:3418655-3418674 | None:intergenic | 25.0% |
! | TAAATTTATGGCTAAGCATT+TGG | - | chr8.4:3418787-3418806 | MS.gene012546:CDS | 25.0% |
! | TAAGACATATGTGCATTATT+AGG | - | chr8.4:3416368-3416387 | MS.gene012546:intron | 25.0% |
! | TAGAATGAATGGATATTAAG+TGG | - | chr8.4:3417994-3418013 | MS.gene012546:intron | 25.0% |
! | TAGTTAAGAAAAATAGGGTT+TGG | - | chr8.4:3415766-3415785 | MS.gene012546:CDS | 25.0% |
! | TTCGTTAGTCAATATAAAAC+CGG | + | chr8.4:3417865-3417884 | None:intergenic | 25.0% |
! | TTGTTGAAGCAAAAGTTTAT+TGG | - | chr8.4:3417768-3417787 | MS.gene012546:intron | 25.0% |
!! | AATACTATTGGTTATCTGTT+AGG | - | chr8.4:3417824-3417843 | MS.gene012546:intron | 25.0% |
!!! | AAAGTTTATTGGTTTTATGG+GGG | - | chr8.4:3417779-3417798 | MS.gene012546:intron | 25.0% |
!!! | ATTTATTTTGTTGCAGAAAC+TGG | - | chr8.4:3418655-3418674 | MS.gene012546:CDS | 25.0% |
!!! | CTGCATTATTTTTCAAAACA+CGG | + | chr8.4:3417164-3417183 | None:intergenic | 25.0% |
!!! | GCAAAAGTTTATTGGTTTTA+TGG | - | chr8.4:3417776-3417795 | MS.gene012546:intron | 25.0% |
!!! | GTTTTATATTGACTAACGAA+AGG | - | chr8.4:3417865-3417884 | MS.gene012546:intron | 25.0% |
!!! | TTACTAACTTCTAGAATGAA+TGG | - | chr8.4:3417983-3418002 | MS.gene012546:intron | 25.0% |
AAAGACAAAATAAAGGGAAG+GGG | + | chr8.4:3418962-3418981 | None:intergenic | 30.0% | |
AATTACACTCTAAACTTCCT+TGG | - | chr8.4:3416313-3416332 | MS.gene012546:intron | 30.0% | |
ACACAATGTTAATGTCATGA+TGG | - | chr8.4:3417462-3417481 | MS.gene012546:intron | 30.0% | |
ACCAAATGACTCAATACTAT+TGG | - | chr8.4:3417812-3417831 | MS.gene012546:intron | 30.0% | |
AGTAACTGTTTCATTCAGTT+AGG | + | chr8.4:3417968-3417987 | None:intergenic | 30.0% | |
ATGAATAAGATTTCAACCCA+AGG | + | chr8.4:3416333-3416352 | None:intergenic | 30.0% | |
ATGATAAGGTATGCAAATAC+TGG | - | chr8.4:3418747-3418766 | MS.gene012546:CDS | 30.0% | |
ATTACACTCTAAACTTCCTT+GGG | - | chr8.4:3416314-3416333 | MS.gene012546:intron | 30.0% | |
ATTAGAGGTTCCATTTCTTA+AGG | + | chr8.4:3418067-3418086 | None:intergenic | 30.0% | |
CAAAGACAAAATAAAGGGAA+GGG | + | chr8.4:3418963-3418982 | None:intergenic | 30.0% | |
CATAACCCTTCTCAAATATA+GGG | + | chr8.4:3417637-3417656 | None:intergenic | 30.0% | |
CCAACAAATACAACAACATA+TGG | + | chr8.4:3417280-3417299 | None:intergenic | 30.0% | |
CCATATGTTGTTGTATTTGT+TGG | - | chr8.4:3417277-3417296 | MS.gene012546:intron | 30.0% | |
CGTTATTCACAATAACAGAA+CGG | + | chr8.4:3415566-3415585 | None:intergenic | 30.0% | |
CGTTCTGTTATTGTGAATAA+CGG | - | chr8.4:3415564-3415583 | MS.gene012546:intron | 30.0% | |
CTTGATGAACATTTATTGGT+TGG | - | chr8.4:3418815-3418834 | MS.gene012546:CDS | 30.0% | |
CTTTCAATGGTTTACATATC+TGG | - | chr8.4:3419107-3419126 | MS.gene012546:CDS | 30.0% | |
GGAAAATTGTCATAGTTGAA+TGG | - | chr8.4:3418328-3418347 | MS.gene012546:CDS | 30.0% | |
GGAATAAGTGCATAAAAGAT+TGG | + | chr8.4:3418033-3418052 | None:intergenic | 30.0% | |
GGTTATAATTTGAGGAGTAA+CGG | - | chr8.4:3415591-3415610 | MS.gene012546:intron | 30.0% | |
GTTATTGTGAATAACGGTAA+CGG | - | chr8.4:3415570-3415589 | MS.gene012546:intron | 30.0% | |
TAATGATGATTTACTGCAAG+TGG | - | chr8.4:3416277-3416296 | MS.gene012546:intron | 30.0% | |
TATAAAACCGGTATTAATCC+CGG | + | chr8.4:3417853-3417872 | None:intergenic | 30.0% | |
TATGTAAAAATTCCGTACGT+CGG | - | chr8.4:3417368-3417387 | MS.gene012546:intron | 30.0% | |
TCAAATATAGGGATCTGAAA+GGG | + | chr8.4:3417626-3417645 | None:intergenic | 30.0% | |
TCATAACCCTTCTCAAATAT+AGG | + | chr8.4:3417638-3417657 | None:intergenic | 30.0% | |
TGAATAAATTGAACCTAACC+TGG | + | chr8.4:3418567-3418586 | None:intergenic | 30.0% | |
TTAGAGGTTCCATTTCTTAA+GGG | + | chr8.4:3418066-3418085 | None:intergenic | 30.0% | |
! | AAAAACTGGCTTCATTTACA+AGG | - | chr8.4:3417039-3417058 | MS.gene012546:intron | 30.0% |
! | ACCAATAGTATTGAGTCATT+TGG | + | chr8.4:3417816-3417835 | None:intergenic | 30.0% |
! | ATGGAGCTTTTGATGTAAAT+AGG | - | chr8.4:3415664-3415683 | MS.gene012546:intron | 30.0% |
! | GAGAATGATAGTGTAAACAA+TGG | - | chr8.4:3415645-3415664 | MS.gene012546:intron | 30.0% |
! | GTTGTATTTGTTGGAGTTAA+TGG | - | chr8.4:3417286-3417305 | MS.gene012546:intron | 30.0% |
! | TTGTCATAGTTGAATGGTTT+TGG | - | chr8.4:3418334-3418353 | MS.gene012546:CDS | 30.0% |
!! | GTTGGTAATGTTAGTGTAAA+TGG | - | chr8.4:3415618-3415637 | MS.gene012546:intron | 30.0% |
!! | TATGTTTGATTTTGTCAGGT+GGG | - | chr8.4:3419077-3419096 | MS.gene012546:CDS | 30.0% |
!! | TTATGTTTGATTTTGTCAGG+TGG | - | chr8.4:3419076-3419095 | MS.gene012546:CDS | 30.0% |
!!! | CGTGTTTTGAAAAATAATGC+AGG | - | chr8.4:3417162-3417181 | MS.gene012546:CDS | 30.0% |
!!! | GTTTTGAAAAATAATGCAGG+CGG | - | chr8.4:3417165-3417184 | MS.gene012546:CDS | 30.0% |
AAATATAGGGATCTGAAAGG+GGG | + | chr8.4:3417624-3417643 | None:intergenic | 35.0% | |
AACAGAATCCCCTTAAGAAA+TGG | - | chr8.4:3418054-3418073 | MS.gene012546:intron | 35.0% | |
AACATCAATCGGAATCTATG+AGG | + | chr8.4:3416147-3416166 | None:intergenic | 35.0% | |
AACTGTTTCATTCAGTTAGG+CGG | + | chr8.4:3417965-3417984 | None:intergenic | 35.0% | |
AAGAAGGTTAGGAATAAAGG+CGG | - | chr8.4:3415693-3415712 | MS.gene012546:CDS | 35.0% | |
AAGACAAAATAAAGGGAAGG+GGG | + | chr8.4:3418961-3418980 | None:intergenic | 35.0% | |
AAGATCCCATCAATCAATCT+GGG | + | chr8.4:3418704-3418723 | None:intergenic | 35.0% | |
AAGCCTGATGCTAAAAAGAA+GGG | - | chr8.4:3415987-3416006 | MS.gene012546:intron | 35.0% | |
AAGTCTTGAAGGCAAAAAAC+TGG | - | chr8.4:3417025-3417044 | MS.gene012546:CDS | 35.0% | |
AAGTGCATAAAAGATTGGGA+GGG | + | chr8.4:3418028-3418047 | None:intergenic | 35.0% | |
AATATGTCAATAGAACGCCT+AGG | + | chr8.4:3417223-3417242 | None:intergenic | 35.0% | |
ATAAAACCGGTATTAATCCC+GGG | + | chr8.4:3417852-3417871 | None:intergenic | 35.0% | |
ATCCTCAACATCATTAGATG+TGG | - | chr8.4:3416873-3416892 | MS.gene012546:intron | 35.0% | |
ATCTGAAAGGGGGAATTATA+AGG | + | chr8.4:3417614-3417633 | None:intergenic | 35.0% | |
ATGTAAAAATTCCGTACGTC+GGG | - | chr8.4:3417369-3417388 | MS.gene012546:intron | 35.0% | |
ATTCATTCGATGCTTTCTTG+TGG | + | chr8.4:3418897-3418916 | None:intergenic | 35.0% | |
ATTCGTTTGAAAGTCAGGAA+AGG | - | chr8.4:3416425-3416444 | MS.gene012546:intron | 35.0% | |
CAAATATAGGGATCTGAAAG+GGG | + | chr8.4:3417625-3417644 | None:intergenic | 35.0% | |
CAATCAAAGCAACATGTAAG+AGG | + | chr8.4:3416536-3416555 | None:intergenic | 35.0% | |
CAGAAGAAGGTTAGGAATAA+AGG | - | chr8.4:3415690-3415709 | MS.gene012546:CDS | 35.0% | |
CAGATCCCTATATTTGAGAA+GGG | - | chr8.4:3417629-3417648 | MS.gene012546:intron | 35.0% | |
CTATCACTGTTTCAGTTTCT+AGG | - | chr8.4:3418249-3418268 | MS.gene012546:CDS | 35.0% | |
CTCAAATATAGGGATCTGAA+AGG | + | chr8.4:3417627-3417646 | None:intergenic | 35.0% | |
CTGATCAAAATCTCGATACA+CGG | + | chr8.4:3415334-3415353 | None:intergenic | 35.0% | |
CTGCATAATCACACAGAAAA+TGG | + | chr8.4:3417422-3417441 | None:intergenic | 35.0% | |
CTTTATTCCTAACCTTCTTC+TGG | + | chr8.4:3415692-3415711 | None:intergenic | 35.0% | |
GAAAATGGAATATCTCCTTC+AGG | + | chr8.4:3417407-3417426 | None:intergenic | 35.0% | |
GATTATTTGGCTAAGGAACA+AGG | - | chr8.4:3415870-3415889 | MS.gene012546:intron | 35.0% | |
GCAAAGACAAAATAAAGGGA+AGG | + | chr8.4:3418964-3418983 | None:intergenic | 35.0% | |
GCACATATGTCTTAAAGCAA+AGG | + | chr8.4:3416362-3416381 | None:intergenic | 35.0% | |
GCGTTCTATTGACATATTGA+GGG | - | chr8.4:3417225-3417244 | MS.gene012546:CDS | 35.0% | |
GGAGACTGTCCATTTAATAT+GGG | - | chr8.4:3418845-3418864 | MS.gene012546:CDS | 35.0% | |
GGATTTGAAGAAATCGAATC+CGG | - | chr8.4:3415395-3415414 | MS.gene012546:intron | 35.0% | |
GGGTTCAATAACAGACTTAT+GGG | + | chr8.4:3418635-3418654 | None:intergenic | 35.0% | |
TAAGTGCATAAAAGATTGGG+AGG | + | chr8.4:3418029-3418048 | None:intergenic | 35.0% | |
TACTAATCTTGCTAAGGTGA+AGG | - | chr8.4:3417321-3417340 | MS.gene012546:intron | 35.0% | |
TAGAGGTTCCATTTCTTAAG+GGG | + | chr8.4:3418065-3418084 | None:intergenic | 35.0% | |
TCAAGCAACACAACATCAAT+CGG | + | chr8.4:3416158-3416177 | None:intergenic | 35.0% | |
TCAATCAAAGTAGCAGATCA+AGG | + | chr8.4:3416652-3416671 | None:intergenic | 35.0% | |
TCACAAGGAAAATGGAAACA+GGG | + | chr8.4:3416586-3416605 | None:intergenic | 35.0% | |
TCAGATCCCTATATTTGAGA+AGG | - | chr8.4:3417628-3417647 | MS.gene012546:intron | 35.0% | |
TCATGGCCCATTTCATTATT+GGG | - | chr8.4:3418216-3418235 | MS.gene012546:CDS | 35.0% | |
TGAGATGGAAACAAAATCAG+CGG | + | chr8.4:3418925-3418944 | None:intergenic | 35.0% | |
TGGGTTCAATAACAGACTTA+TGG | + | chr8.4:3418636-3418655 | None:intergenic | 35.0% | |
TTCATCTTACATGTCACTGA+TGG | - | chr8.4:3418412-3418431 | MS.gene012546:CDS | 35.0% | |
TTCATGGCCCATTTCATTAT+TGG | - | chr8.4:3418215-3418234 | MS.gene012546:CDS | 35.0% | |
TTGGTATTCGTTTGAAAGTC+AGG | - | chr8.4:3416420-3416439 | MS.gene012546:intron | 35.0% | |
TTTCAAAGTTCAACCAGGTT+AGG | - | chr8.4:3418551-3418570 | MS.gene012546:CDS | 35.0% | |
TTTCTTAAGGGGATTCTGTT+AGG | + | chr8.4:3418054-3418073 | None:intergenic | 35.0% | |
TTTGTTGGAGTTAATGGAGT+TGG | - | chr8.4:3417292-3417311 | MS.gene012546:intron | 35.0% | |
! | ACGGTAACGGTTATAATTTG+AGG | - | chr8.4:3415583-3415602 | MS.gene012546:intron | 35.0% |
! | AGCTTTGTCCAACTACAATT+GGG | - | chr8.4:3418592-3418611 | MS.gene012546:CDS | 35.0% |
! | CATTTTCTGTGTGATTATGC+AGG | - | chr8.4:3417420-3417439 | MS.gene012546:CDS | 35.0% |
! | GAAGGTTGATTATTTGGCTA+AGG | - | chr8.4:3415863-3415882 | MS.gene012546:intron | 35.0% |
! | GATCGAATCAATGTATCGAT+CGG | + | chr8.4:3415108-3415127 | None:intergenic | 35.0% |
! | GGATAGGAAGGTTGATTATT+TGG | - | chr8.4:3415857-3415876 | MS.gene012546:intron | 35.0% |
! | GTTCGACACTATTGATGATA+AGG | - | chr8.4:3418733-3418752 | MS.gene012546:CDS | 35.0% |
! | TGAACATTTATTGGTTGGCT+AGG | - | chr8.4:3418820-3418839 | MS.gene012546:CDS | 35.0% |
! | TGGACTTTTCACAATGATCT+AGG | - | chr8.4:3415201-3415220 | MS.gene012546:intron | 35.0% |
! | TGTTTCCATTTTCCTTGTGA+CGG | - | chr8.4:3416586-3416605 | MS.gene012546:CDS | 35.0% |
!! | TAGCTTTGTCCAACTACAAT+TGG | - | chr8.4:3418591-3418610 | MS.gene012546:CDS | 35.0% |
!! | TTACATTCTGTGTCACTTGT+AGG | - | chr8.4:3416962-3416981 | MS.gene012546:CDS | 35.0% |
!!! | CAGTTACTGATTTTCACAAG+AGG | - | chr8.4:3415030-3415049 | MS.gene012546:CDS | 35.0% |
!!! | GATTTTTAGTAGTGACAGTG+AGG | - | chr8.4:3415917-3415936 | MS.gene012546:intron | 35.0% |
!!! | TGGTTCGTATTTTAACTCCT+AGG | - | chr8.4:3417203-3417222 | MS.gene012546:CDS | 35.0% |
!!! | TTACTGATTTTCACAAGAGG+AGG | - | chr8.4:3415033-3415052 | MS.gene012546:CDS | 35.0% |
AAAAATAATGCAGGCGGCAA+TGG | - | chr8.4:3417171-3417190 | MS.gene012546:CDS | 40.0% | |
AAAATCTCGATACACGGTTC+TGG | + | chr8.4:3415328-3415347 | None:intergenic | 40.0% | |
AAATTGAGCCACGCTCTTAT+AGG | - | chr8.4:3417888-3417907 | MS.gene012546:intron | 40.0% | |
AAGCAATTCAGGAAGCTTCA+CGG | - | chr8.4:3417684-3417703 | MS.gene012546:intron | 40.0% | |
AAGTTCAGCAAGTTTACCTC+TGG | + | chr8.4:3416031-3416050 | None:intergenic | 40.0% | |
AATTCTGCATCTGCTCTATG+TGG | - | chr8.4:3415251-3415270 | MS.gene012546:intron | 40.0% | |
ACGGATCATGTTGATGTTGA+TGG | - | chr8.4:3415822-3415841 | MS.gene012546:intron | 40.0% | |
ACTTGACGTTGAGTTTCTTG+AGG | + | chr8.4:3419175-3419194 | None:intergenic | 40.0% | |
AGAAGACTTAAGAGAGCTGA+TGG | + | chr8.4:3418103-3418122 | None:intergenic | 40.0% | |
AGAAGGTTAGGAATAAAGGC+GGG | - | chr8.4:3415694-3415713 | MS.gene012546:CDS | 40.0% | |
AGTAGGATATTCCTCTCTGA+AGG | + | chr8.4:3417942-3417961 | None:intergenic | 40.0% | |
AGTATAGAGTATACCCTCCA+AGG | - | chr8.4:3418156-3418175 | MS.gene012546:intron | 40.0% | |
CAAGATCCCATCAATCAATC+TGG | + | chr8.4:3418705-3418724 | None:intergenic | 40.0% | |
CAAGCCTGATGCTAAAAAGA+AGG | - | chr8.4:3415986-3416005 | MS.gene012546:intron | 40.0% | |
CAATTTCATTGCATGACCAG+AGG | + | chr8.4:3415065-3415084 | None:intergenic | 40.0% | |
CACCACATCTAATGATGTTG+AGG | + | chr8.4:3416878-3416897 | None:intergenic | 40.0% | |
CGGAGACTGTCCATTTAATA+TGG | - | chr8.4:3418844-3418863 | MS.gene012546:CDS | 40.0% | |
CGGATCATGTTGATGTTGAT+GGG | - | chr8.4:3415823-3415842 | MS.gene012546:intron | 40.0% | |
CTACACCCAGATTGATTGAT+GGG | - | chr8.4:3418696-3418715 | MS.gene012546:CDS | 40.0% | |
CTCAACATCATTAGATGTGG+TGG | - | chr8.4:3416876-3416895 | MS.gene012546:intron | 40.0% | |
CTCTGGTCATGCAATGAAAT+TGG | - | chr8.4:3415063-3415082 | MS.gene012546:CDS | 40.0% | |
CTGATGCTAAAAAGAAGGGT+TGG | - | chr8.4:3415991-3416010 | MS.gene012546:intron | 40.0% | |
CTGGAGCCCAATAATGAAAT+GGG | + | chr8.4:3418225-3418244 | None:intergenic | 40.0% | |
CTTCTCCAACAAATAAGACC+AGG | + | chr8.4:3418501-3418520 | None:intergenic | 40.0% | |
GAGCTGCTTATTCTCTCAAA+TGG | - | chr8.4:3415181-3415200 | MS.gene012546:intron | 40.0% | |
GATTCGATCTTGTCTTCTAG+AGG | - | chr8.4:3415119-3415138 | MS.gene012546:CDS | 40.0% | |
GCTTGTGATACATTTCGATC+AGG | - | chr8.4:3417487-3417506 | MS.gene012546:intron | 40.0% | |
GGATCATGTTGATGTTGATG+GGG | - | chr8.4:3415824-3415843 | MS.gene012546:intron | 40.0% | |
GGCGTTCTATTGACATATTG+AGG | - | chr8.4:3417224-3417243 | MS.gene012546:CDS | 40.0% | |
GTACTATCTCTTGACAGCAA+AGG | + | chr8.4:3418275-3418294 | None:intergenic | 40.0% | |
GTCACAAGGAAAATGGAAAC+AGG | + | chr8.4:3416587-3416606 | None:intergenic | 40.0% | |
GTTTGAAGAATGACGGTGAT+GGG | - | chr8.4:3415511-3415530 | MS.gene012546:CDS | 40.0% | |
TAATGAAATGGGCCATGAAG+AGG | + | chr8.4:3418214-3418233 | None:intergenic | 40.0% | |
TAGACTCATGACCAAGAATG+TGG | - | chr8.4:3416841-3416860 | MS.gene012546:intron | 40.0% | |
TCAGCTTTCAAAGTTCAACC+AGG | - | chr8.4:3418546-3418565 | MS.gene012546:CDS | 40.0% | |
TCTTACAATTACGATGCACC+TGG | - | chr8.4:3415159-3415178 | MS.gene012546:intron | 40.0% | |
TGAAAAAGATCCTGCTGTTG+TGG | - | chr8.4:3417655-3417674 | MS.gene012546:intron | 40.0% | |
TGAGAAGCTATGTGAATCAG+TGG | - | chr8.4:3416998-3417017 | MS.gene012546:CDS | 40.0% | |
TGATGATTTACTGCAAGTGG+TGG | - | chr8.4:3416280-3416299 | MS.gene012546:intron | 40.0% | |
TGATTATGCAGGTTGCTTAC+TGG | - | chr8.4:3417431-3417450 | MS.gene012546:CDS | 40.0% | |
TGTAAATAGGCTCCAGAAGA+AGG | - | chr8.4:3415677-3415696 | MS.gene012546:CDS | 40.0% | |
TGTGGCAAAAGAAGCAATTC+AGG | - | chr8.4:3417673-3417692 | MS.gene012546:intron | 40.0% | |
TTCATGCTGCAAAAGAGCAA+AGG | - | chr8.4:3417251-3417270 | MS.gene012546:intron | 40.0% | |
TTGGTTATCTGTTAGGAACC+CGG | - | chr8.4:3417831-3417850 | MS.gene012546:intron | 40.0% | |
TTTGAAGAAATCGAATCCGG+TGG | - | chr8.4:3415398-3415417 | MS.gene012546:intron | 40.0% | |
TTTGACAGTGCTCTCATCAA+TGG | + | chr8.4:3418454-3418473 | None:intergenic | 40.0% | |
! | ACATGTCACTGATGGTTTTC+AGG | - | chr8.4:3418420-3418439 | MS.gene012546:CDS | 40.0% |
! | ATGATGAGGATGATGATGCT+GGG | - | chr8.4:3415955-3415974 | MS.gene012546:intron | 40.0% |
! | CATTTATTGGTTGGCTAGGA+CGG | - | chr8.4:3418824-3418843 | MS.gene012546:CDS | 40.0% |
! | CTTATTTGTTGGAGAAGCAC+TGG | - | chr8.4:3418504-3418523 | MS.gene012546:CDS | 40.0% |
! | GAAATTGGCAACGCTTTGAA+AGG | - | chr8.4:3415078-3415097 | MS.gene012546:CDS | 40.0% |
! | GGTTTTCATCTATGTTCCAG+AGG | - | chr8.4:3416012-3416031 | MS.gene012546:intron | 40.0% |
! | TCTGGAGCCCAATAATGAAA+TGG | + | chr8.4:3418226-3418245 | None:intergenic | 40.0% |
! | TGAAGAGGATGATGATGATG+AGG | - | chr8.4:3415941-3415960 | MS.gene012546:intron | 40.0% |
! | TTGGAGGGTATACTCTATAC+TGG | + | chr8.4:3418157-3418176 | None:intergenic | 40.0% |
!! | AATGACGGTGATGGGAAAAA+TGG | - | chr8.4:3415519-3415538 | MS.gene012546:CDS | 40.0% |
!! | ATGACGGTGATGGGAAAAAT+GGG | - | chr8.4:3415520-3415539 | MS.gene012546:CDS | 40.0% |
!! | CAACCCTTCTTTTTAGCATC+AGG | + | chr8.4:3415993-3416012 | None:intergenic | 40.0% |
!! | TTTAAGGAGCGTCTTCACAA+TGG | + | chr8.4:3419198-3419217 | None:intergenic | 40.0% |
AAACAGCAGGTGACATGGAA+GGG | - | chr8.4:3415438-3415457 | MS.gene012546:intron | 45.0% | |
AAATCGAATCCGGTGGTTGT+AGG | - | chr8.4:3415405-3415424 | MS.gene012546:intron | 45.0% | |
AACAGACGCTGTTGTAACCA+AGG | - | chr8.4:3415728-3415747 | MS.gene012546:CDS | 45.0% | |
AAGGATATCTTCCACAGTGC+AGG | - | chr8.4:3417058-3417077 | MS.gene012546:intron | 45.0% | |
AGACCAGGTCAGGATTGTTA+AGG | + | chr8.4:3418486-3418505 | None:intergenic | 45.0% | |
AGAGCTGATGGTTAATGACG+TGG | + | chr8.4:3418091-3418110 | None:intergenic | 45.0% | |
AGAGTATACCCTCCAAGGTT+TGG | - | chr8.4:3418123-3418142 | MS.gene012546:intron | 45.0% | |
ATAGGAAACAGCAGGTGACA+TGG | - | chr8.4:3415433-3415452 | MS.gene012546:intron | 45.0% | |
ATAGGCTCCAGAAGAAGGTT+AGG | - | chr8.4:3415682-3415701 | MS.gene012546:CDS | 45.0% | |
ATGCTTGTGCTCAGTATTGC+TGG | - | chr8.4:3416764-3416783 | MS.gene012546:CDS | 45.0% | |
ATGGGGATGCTGATAAGGAT+AGG | - | chr8.4:3415841-3415860 | MS.gene012546:intron | 45.0% | |
ATTCAGGAAGCTTCACGGAA+TGG | - | chr8.4:3417689-3417708 | MS.gene012546:intron | 45.0% | |
CAAGAGGAGGATTAATCCTC+TGG | - | chr8.4:3415046-3415065 | MS.gene012546:CDS | 45.0% | |
CAAGTCCGACTTCTCCAAAT+TGG | + | chr8.4:3416795-3416814 | None:intergenic | 45.0% | |
CAATTTGGAGAAGTCGGACT+TGG | - | chr8.4:3416793-3416812 | MS.gene012546:intron | 45.0% | |
CCAACAAATAAGACCAGGTC+AGG | + | chr8.4:3418496-3418515 | None:intergenic | 45.0% | |
CCACAATCTGATCCTCTTCA+TGG | - | chr8.4:3418199-3418218 | MS.gene012546:intron | 45.0% | |
CCATCAATCAATCTGGGTGT+AGG | + | chr8.4:3418698-3418717 | None:intergenic | 45.0% | |
CCATGAAGAGGATCAGATTG+TGG | + | chr8.4:3418202-3418221 | None:intergenic | 45.0% | |
CCTACACCCAGATTGATTGA+TGG | - | chr8.4:3418695-3418714 | MS.gene012546:CDS | 45.0% | |
CGATACCGTCACAAGGAAAA+TGG | + | chr8.4:3416594-3416613 | None:intergenic | 45.0% | |
CTACCTTAACAATCCTGACC+TGG | - | chr8.4:3418480-3418499 | MS.gene012546:CDS | 45.0% | |
CTGAAACAGTGATAGAGCTC+TGG | + | chr8.4:3418244-3418263 | None:intergenic | 45.0% | |
GAAGGCCAATTTGGAGAAGT+CGG | - | chr8.4:3416787-3416806 | MS.gene012546:intron | 45.0% | |
GACGAAGACCCAATTGTAGT+TGG | + | chr8.4:3418603-3418622 | None:intergenic | 45.0% | |
GACGTTGAGTTTCTTGAGGT+CGG | + | chr8.4:3419171-3419190 | None:intergenic | 45.0% | |
GAGGATCAGATTGTGGATAC+TGG | + | chr8.4:3418195-3418214 | None:intergenic | 45.0% | |
GAGTATACCCTCCAAGGTTT+GGG | - | chr8.4:3418124-3418143 | MS.gene012546:intron | 45.0% | |
GAGTTTCTTGAGGTCGGTAT+AGG | + | chr8.4:3419165-3419184 | None:intergenic | 45.0% | |
GCAGTTGAAGATTGAAGCTG+AGG | - | chr8.4:3415362-3415381 | MS.gene012546:intron | 45.0% | |
GGATGCTGATAAGGATAGGA+AGG | - | chr8.4:3415845-3415864 | MS.gene012546:intron | 45.0% | |
GGTTAATGACGTGGCATTAG+AGG | + | chr8.4:3418082-3418101 | None:intergenic | 45.0% | |
GGTTTGAAGAATGACGGTGA+TGG | - | chr8.4:3415510-3415529 | MS.gene012546:CDS | 45.0% | |
GTCGGCATCAAATGTCGATA+GGG | + | chr8.4:3417102-3417121 | None:intergenic | 45.0% | |
GTTAGGAATAAAGGCGGGAA+TGG | - | chr8.4:3415699-3415718 | MS.gene012546:CDS | 45.0% | |
TAAAAAGCAAGCCCGACGTA+CGG | + | chr8.4:3417383-3417402 | None:intergenic | 45.0% | |
TAAAAGATTGGGAGGGTAGC+TGG | + | chr8.4:3418021-3418040 | None:intergenic | 45.0% | |
TAGAAACCAAACCTGCACTG+TGG | + | chr8.4:3417072-3417091 | None:intergenic | 45.0% | |
TAGGAACCCGGGATTAATAC+CGG | - | chr8.4:3417843-3417862 | MS.gene012546:intron | 45.0% | |
TAGTGACAGTGAGGATGAAG+AGG | - | chr8.4:3415926-3415945 | MS.gene012546:intron | 45.0% | |
TATCTTCCACAGTGCAGGTT+TGG | - | chr8.4:3417063-3417082 | MS.gene012546:intron | 45.0% | |
TATTGCTGGGAAGGCCAATT+TGG | - | chr8.4:3416778-3416797 | MS.gene012546:CDS | 45.0% | |
TCCTTCAGAGCTTTCAAAGC+TGG | + | chr8.4:3416821-3416840 | None:intergenic | 45.0% | |
TGCTTGTGCTCAGTATTGCT+GGG | - | chr8.4:3416765-3416784 | MS.gene012546:CDS | 45.0% | |
TGGTTATCTGTTAGGAACCC+GGG | - | chr8.4:3417832-3417851 | MS.gene012546:intron | 45.0% | |
TGTTAAGCGTGAATTCTCGC+AGG | - | chr8.4:3415290-3415309 | MS.gene012546:intron | 45.0% | |
TTCATTCAGTTAGGCGGAGT+AGG | + | chr8.4:3417959-3417978 | None:intergenic | 45.0% | |
TTGAGAGAATAAGCAGCTCC+AGG | + | chr8.4:3415180-3415199 | None:intergenic | 45.0% | |
! | GATGATGAGGATGATGATGC+TGG | - | chr8.4:3415954-3415973 | MS.gene012546:intron | 45.0% |
! | GGAACAAGGTGAGAGTATGA+TGG | - | chr8.4:3415884-3415903 | MS.gene012546:intron | 45.0% |
! | GTTGCTTTCCTATAAGAGCG+TGG | + | chr8.4:3417899-3417918 | None:intergenic | 45.0% |
! | TGTTGATGGGGATGCTGATA+AGG | - | chr8.4:3415836-3415855 | MS.gene012546:intron | 45.0% |
!! | ACCAGCTTTGAAAGCTCTGA+AGG | - | chr8.4:3416817-3416836 | MS.gene012546:intron | 45.0% |
!! | CCTGACCTGGTCTTATTTGT+TGG | - | chr8.4:3418493-3418512 | MS.gene012546:CDS | 45.0% |
!! | CTTCTAGAGTATACCCTCCA+AGG | - | chr8.4:3418118-3418137 | MS.gene012546:intron | 45.0% |
!! | GAAAGTCAGGAAAGGTGTTG+AGG | - | chr8.4:3416433-3416452 | MS.gene012546:intron | 45.0% |
!! | TTGAGGAGTAACGGTGTTGT+TGG | - | chr8.4:3415600-3415619 | MS.gene012546:intron | 45.0% |
!! | TTTGTTGGAGAAGCACTGGT+TGG | - | chr8.4:3418508-3418527 | MS.gene012546:CDS | 45.0% |
!!! | GGGCTTGCTTTTTAACCTGA+AGG | - | chr8.4:3417389-3417408 | MS.gene012546:CDS | 45.0% |
AACCAAGGCTGAGCCGAAAA+AGG | - | chr8.4:3415743-3415762 | MS.gene012546:CDS | 50.0% | |
AGGTGGGAATAGGAAACAGC+AGG | - | chr8.4:3415425-3415444 | MS.gene012546:intron | 50.0% | |
CAATCTGGGTGTAGGAGATG+TGG | + | chr8.4:3418690-3418709 | None:intergenic | 50.0% | |
CCAGTCATGTTTGTGGGATG+CGG | - | chr8.4:3419134-3419153 | MS.gene012546:CDS | 50.0% | |
CCTTGTGACGGTATCGTCTT+GGG | - | chr8.4:3416598-3416617 | MS.gene012546:intron | 50.0% | |
CTATTCCCACCTACAACCAC+CGG | + | chr8.4:3415417-3415436 | None:intergenic | 50.0% | |
GAAACAGCAGGTGACATGGA+AGG | - | chr8.4:3415437-3415456 | MS.gene012546:intron | 50.0% | |
GGAAGCTTCACGGAATGGTT+CGG | - | chr8.4:3417694-3417713 | MS.gene012546:intron | 50.0% | |
GGAAGGGAGATGGATCTGAT+GGG | - | chr8.4:3415454-3415473 | MS.gene012546:intron | 50.0% | |
GGAGCTCCAGTCATGTTTGT+GGG | - | chr8.4:3419128-3419147 | MS.gene012546:CDS | 50.0% | |
GGCGAAATACATGGGTGAGA+TGG | + | chr8.4:3418940-3418959 | None:intergenic | 50.0% | |
GGCGGTGGTTTGAAGAATGA+CGG | - | chr8.4:3415504-3415523 | MS.gene012546:CDS | 50.0% | |
GGTCGGCATCAAATGTCGAT+AGG | + | chr8.4:3417103-3417122 | None:intergenic | 50.0% | |
TCAGTGGCTGCAAGTCTTGA+AGG | - | chr8.4:3417014-3417033 | MS.gene012546:CDS | 50.0% | |
TCCTTGTGACGGTATCGTCT+TGG | - | chr8.4:3416597-3416616 | MS.gene012546:intron | 50.0% | |
TGGAAGGGAGATGGATCTGA+TGG | - | chr8.4:3415453-3415472 | MS.gene012546:intron | 50.0% | |
TGGAGCTCCAGTCATGTTTG+TGG | - | chr8.4:3419127-3419146 | MS.gene012546:CDS | 50.0% | |
TGGGTGTAGGAGATGTGGAA+AGG | + | chr8.4:3418685-3418704 | None:intergenic | 50.0% | |
TGTGCTCAGTATTGCTGGGA+AGG | - | chr8.4:3416769-3416788 | MS.gene012546:CDS | 50.0% | |
! | AAGAAGAATGCCAGTGCTGG+TGG | - | chr8.4:3415477-3415496 | MS.gene012546:intron | 50.0% |
! | ATCTCGATACACGGTTCTGG+TGG | + | chr8.4:3415325-3415344 | None:intergenic | 50.0% |
! | ATTCCTCTCTGAAGGAGCCT+TGG | + | chr8.4:3417934-3417953 | None:intergenic | 50.0% |
! | GCTTCTTTTGCCACAACAGC+AGG | + | chr8.4:3417668-3417687 | None:intergenic | 50.0% |
! | GTTGAGGTCAGGGGCATATA+TGG | - | chr8.4:3416449-3416468 | MS.gene012546:intron | 50.0% |
! | TCTCGATACACGGTTCTGGT+GGG | + | chr8.4:3415324-3415343 | None:intergenic | 50.0% |
! | TGTCTTCTAGAGGAGCGATC+TGG | - | chr8.4:3415129-3415148 | MS.gene012546:intron | 50.0% |
!! | AGGAAAGGTGTTGAGGTCAG+GGG | - | chr8.4:3416440-3416459 | MS.gene012546:intron | 50.0% |
!! | CAGGAAAGGTGTTGAGGTCA+GGG | - | chr8.4:3416439-3416458 | MS.gene012546:intron | 50.0% |
!! | TCAGGAAAGGTGTTGAGGTC+AGG | - | chr8.4:3416438-3416457 | MS.gene012546:intron | 50.0% |
!! | TCTGTGTCACTTGTAGGCTG+AGG | - | chr8.4:3416968-3416987 | MS.gene012546:CDS | 50.0% |
!!! | TACCTTTTTCGGCTCAGCCT+TGG | + | chr8.4:3415748-3415767 | None:intergenic | 50.0% |
ACCCTCCAAGGTTTGCGATG+TGG | - | chr8.4:3418130-3418149 | MS.gene012546:intron | 55.0% | |
AGGGAAGGGGGCGAAATACA+TGG | + | chr8.4:3418949-3418968 | None:intergenic | 55.0% | |
CAGGAGCTGTTGAGCAGTTG+CGG | - | chr8.4:3417506-3417525 | MS.gene012546:intron | 55.0% | |
CAGGTGACATGGAAGGGAGA+TGG | - | chr8.4:3415444-3415463 | MS.gene012546:intron | 55.0% | |
CCCAAGACGATACCGTCACA+AGG | + | chr8.4:3416601-3416620 | None:intergenic | 55.0% | |
CCCACATCCCAAACCTTGGA+GGG | + | chr8.4:3418172-3418191 | None:intergenic | 55.0% | |
CCCACATCGCAAACCTTGGA+GGG | + | chr8.4:3418134-3418153 | None:intergenic | 55.0% | |
CCCTCCAAGGTTTGCGATGT+GGG | - | chr8.4:3418131-3418150 | MS.gene012546:intron | 55.0% | |
CCGCATCCCACAAACATGAC+TGG | + | chr8.4:3419137-3419156 | None:intergenic | 55.0% | |
CGAATCCGGTGGTTGTAGGT+GGG | - | chr8.4:3415409-3415428 | MS.gene012546:intron | 55.0% | |
CGGTGGTTGTAGGTGGGAAT+AGG | - | chr8.4:3415415-3415434 | MS.gene012546:intron | 55.0% | |
GACTCATGCACGCAGACTTC+AGG | - | chr8.4:3417528-3417547 | MS.gene012546:intron | 55.0% | |
GGGAAGAAGAATGCCAGTGC+TGG | - | chr8.4:3415474-3415493 | MS.gene012546:intron | 55.0% | |
GGGAAGGGGGCGAAATACAT+GGG | + | chr8.4:3418948-3418967 | None:intergenic | 55.0% | |
GGTGGGAGCTGCACTTTCAA+TGG | - | chr8.4:3419094-3419113 | MS.gene012546:CDS | 55.0% | |
GTTGTGCTAGTCGACACAGC+TGG | - | chr8.4:3417719-3417738 | MS.gene012546:intron | 55.0% | |
TCGAATCCGGTGGTTGTAGG+TGG | - | chr8.4:3415408-3415427 | MS.gene012546:intron | 55.0% | |
TCTAGAGGAGCGATCTGGTG+CGG | - | chr8.4:3415134-3415153 | MS.gene012546:intron | 55.0% | |
TGAAGCTGAGGCTCGTTCTG+AGG | - | chr8.4:3415374-3415393 | MS.gene012546:intron | 55.0% | |
! | ACCCTCCAAGGTTTGGGATG+TGG | - | chr8.4:3418168-3418187 | MS.gene012546:intron | 55.0% |
! | CCCTCCAAGGTTTGGGATGT+GGG | - | chr8.4:3418169-3418188 | MS.gene012546:intron | 55.0% |
!! | AAGAATGCCAGTGCTGGTGG+TGG | - | chr8.4:3415480-3415499 | MS.gene012546:intron | 55.0% |
CGACACAGCTGGTCGTATGC+AGG | - | chr8.4:3417730-3417749 | MS.gene012546:intron | 60.0% | |
CTGGCCCACATCCCAAACCT+TGG | + | chr8.4:3418176-3418195 | None:intergenic | 60.0% | |
CTGGCCCACATCGCAAACCT+TGG | + | chr8.4:3418138-3418157 | None:intergenic | 60.0% | |
GAGCCAAGGCTCCTTCAGAG+AGG | - | chr8.4:3417928-3417947 | MS.gene012546:intron | 60.0% | |
GCAACAGACCACCTGAGCCA+AGG | - | chr8.4:3417914-3417933 | MS.gene012546:intron | 60.0% | |
GCCCACATCCCAAACCTTGG+AGG | + | chr8.4:3418173-3418192 | None:intergenic | 60.0% | |
GCCCACATCGCAAACCTTGG+AGG | + | chr8.4:3418135-3418154 | None:intergenic | 60.0% | |
GGCGGCAATGGAAGATGCAC+TGG | - | chr8.4:3417183-3417202 | MS.gene012546:CDS | 60.0% | |
TGAAGGAGCCTTGGCTCAGG+TGG | + | chr8.4:3417925-3417944 | None:intergenic | 60.0% | |
! | CTCTGAAGGAGCCTTGGCTC+AGG | + | chr8.4:3417928-3417947 | None:intergenic | 60.0% |
!! | AATGCCAGTGCTGGTGGTGG+TGG | - | chr8.4:3415483-3415502 | MS.gene012546:intron | 60.0% |
ACCGCCACCACCACCAGCAC+TGG | + | chr8.4:3415490-3415509 | None:intergenic | 70.0% | |
!! | AGTGCTGGTGGTGGTGGCGG+TGG | - | chr8.4:3415489-3415508 | MS.gene012546:CDS | 70.0% |
!! | GCCAGTGCTGGTGGTGGTGG+CGG | - | chr8.4:3415486-3415505 | MS.gene012546:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 3415021 | 3419220 | 3415021 | ID=MS.gene012546 |
chr8.4 | mRNA | 3415021 | 3419220 | 3415021 | ID=MS.gene012546.t1;Parent=MS.gene012546 |
chr8.4 | exon | 3418208 | 3419220 | 3418208 | ID=MS.gene012546.t1.exon1;Parent=MS.gene012546.t1 |
chr8.4 | CDS | 3418208 | 3419220 | 3418208 | ID=cds.MS.gene012546.t1;Parent=MS.gene012546.t1 |
chr8.4 | exon | 3417379 | 3417463 | 3417379 | ID=MS.gene012546.t1.exon2;Parent=MS.gene012546.t1 |
chr8.4 | CDS | 3417379 | 3417463 | 3417379 | ID=cds.MS.gene012546.t1;Parent=MS.gene012546.t1 |
chr8.4 | exon | 3417162 | 3417257 | 3417162 | ID=MS.gene012546.t1.exon3;Parent=MS.gene012546.t1 |
chr8.4 | CDS | 3417162 | 3417257 | 3417162 | ID=cds.MS.gene012546.t1;Parent=MS.gene012546.t1 |
chr8.4 | exon | 3416905 | 3417057 | 3416905 | ID=MS.gene012546.t1.exon4;Parent=MS.gene012546.t1 |
chr8.4 | CDS | 3416905 | 3417057 | 3416905 | ID=cds.MS.gene012546.t1;Parent=MS.gene012546.t1 |
chr8.4 | exon | 3416692 | 3416799 | 3416692 | ID=MS.gene012546.t1.exon5;Parent=MS.gene012546.t1 |
chr8.4 | CDS | 3416692 | 3416799 | 3416692 | ID=cds.MS.gene012546.t1;Parent=MS.gene012546.t1 |
chr8.4 | exon | 3416490 | 3416609 | 3416490 | ID=MS.gene012546.t1.exon6;Parent=MS.gene012546.t1 |
chr8.4 | CDS | 3416490 | 3416609 | 3416490 | ID=cds.MS.gene012546.t1;Parent=MS.gene012546.t1 |
chr8.4 | exon | 3415674 | 3415799 | 3415674 | ID=MS.gene012546.t1.exon7;Parent=MS.gene012546.t1 |
chr8.4 | CDS | 3415674 | 3415799 | 3415674 | ID=cds.MS.gene012546.t1;Parent=MS.gene012546.t1 |
chr8.4 | exon | 3415487 | 3415570 | 3415487 | ID=MS.gene012546.t1.exon8;Parent=MS.gene012546.t1 |
chr8.4 | CDS | 3415487 | 3415570 | 3415487 | ID=cds.MS.gene012546.t1;Parent=MS.gene012546.t1 |
chr8.4 | exon | 3415021 | 3415146 | 3415021 | ID=MS.gene012546.t1.exon9;Parent=MS.gene012546.t1 |
chr8.4 | CDS | 3415021 | 3415146 | 3415021 | ID=cds.MS.gene012546.t1;Parent=MS.gene012546.t1 |
Gene Sequence |
Protein sequence |