AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene012546


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012546.t1 MTR_4g130770 97.642 636 10 2 1 636 1 631 0.0 1261
MS.gene012546.t1 MTR_4g010050 30.962 239 147 3 397 635 75 295 1.12e-30 126
MS.gene012546.t1 MTR_7g104890 34.536 194 116 2 430 623 33 215 3.53e-30 124
MS.gene012546.t1 MTR_7g104890 28.082 292 192 4 332 623 75 348 8.48e-30 124
MS.gene012546.t1 MTR_2g104050 30.544 239 148 3 397 635 75 295 1.47e-29 122
MS.gene012546.t1 MTR_8g032340 27.517 298 185 8 348 635 94 370 4.17e-19 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene012546.t1 AT4G30600 75.307 652 127 14 1 636 1 634 0.0 887
MS.gene012546.t1 AT4G30600 75.307 652 127 14 1 636 1 634 0.0 887
MS.gene012546.t1 AT1G48900 26.797 306 206 3 330 635 8 295 4.74e-32 129
MS.gene012546.t1 AT1G48900 26.797 306 206 3 330 635 8 295 5.81e-32 130
MS.gene012546.t1 AT5G03940 28.571 294 192 4 330 623 83 358 7.86e-32 130
MS.gene012546.t1 AT1G15310 28.727 275 178 3 361 635 39 295 1.37e-31 129
MS.gene012546.t1 AT2G45770 29.667 300 180 8 344 635 89 365 4.10e-27 114
MS.gene012546.t1 AT5G49500 24.351 308 213 4 330 635 8 297 2.46e-23 104
MS.gene012546.t1 AT5G49500 29.480 173 111 2 463 635 14 175 6.10e-20 92.8

Find 144 sgRNAs with CRISPR-Local

Find 333 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGTTTCATCCTTTCATTTA+AGG 0.135782 8.4:+3415008 None:intergenic
GGATAGGAAGGTTGATTATT+TGG 0.186314 8.4:-3418362 MS.gene012546:CDS
CTTTCAATGGTTTACATATC+TGG 0.196127 8.4:-3415112 MS.gene012546:CDS
TGATTATGCAGGTTGCTTAC+TGG 0.239203 8.4:-3416788 MS.gene012546:intron
GTTGGTAATGTTAGTGTAAA+TGG 0.240516 8.4:-3418601 MS.gene012546:CDS
CATAACCCTTCTCAAATATA+GGG 0.264100 8.4:+3416585 None:intergenic
TCATAACCCTTCTCAAATAT+AGG 0.269160 8.4:+3416584 None:intergenic
CTCTGGTCATGCAATGAAAT+TGG 0.273870 8.4:-3419156 MS.gene012546:CDS
GTTGTATTTGTTGGAGTTAA+TGG 0.282982 8.4:-3416933 MS.gene012546:CDS
CTTTATTCCTAACCTTCTTC+TGG 0.284805 8.4:+3418530 None:intergenic
TATTGCTGGGAAGGCCAATT+TGG 0.285068 8.4:-3417441 MS.gene012546:CDS
CCATATGTTGTTGTATTTGT+TGG 0.324829 8.4:-3416942 MS.gene012546:CDS
CCTGACCTGGTCTTATTTGT+TGG 0.326012 8.4:-3415726 MS.gene012546:CDS
CAAGTCCGACTTCTCCAAAT+TGG 0.330709 8.4:+3417427 None:intergenic
AACCAAGGCTGAGCCGAAAA+AGG 0.357649 8.4:-3418476 MS.gene012546:CDS
GACTCATGCACGCAGACTTC+AGG 0.360707 8.4:-3416691 MS.gene012546:intron
ATGCTTGTGCTCAGTATTGC+TGG 0.365590 8.4:-3417455 MS.gene012546:intron
CAAGATCCCATCAATCAATC+TGG 0.383740 8.4:+3415517 None:intergenic
GAGTTTCTTGAGGTCGGTAT+AGG 0.387081 8.4:+3415057 None:intergenic
CAGAAGAAGGTTAGGAATAA+AGG 0.388438 8.4:-3418529 MS.gene012546:CDS
ACGGATCATGTTGATGTTGA+TGG 0.394256 8.4:-3418397 MS.gene012546:CDS
GGTGGGAGCTGCACTTTCAA+TGG 0.401497 8.4:-3415125 MS.gene012546:CDS
CGGTGGTTGTAGGTGGGAAT+AGG 0.404012 8.4:-3418804 MS.gene012546:CDS
TTTGACAGTGCTCTCATCAA+TGG 0.412182 8.4:+3415768 None:intergenic
ATAAATACATACCACATTCT+TGG 0.414415 8.4:+3417367 None:intergenic
TCCTTCAGAGCTTTCAAAGC+TGG 0.420133 8.4:+3417401 None:intergenic
TTGAGGAGTAACGGTGTTGT+TGG 0.422921 8.4:-3418619 MS.gene012546:CDS
CCAACAAATACAACAACATA+TGG 0.423685 8.4:+3416942 None:intergenic
GCCAGTGCTGGTGGTGGTGG+CGG 0.424543 8.4:-3418733 MS.gene012546:CDS
TGTGGCAAAAGAAGCAATTC+AGG 0.429961 8.4:-3416546 MS.gene012546:CDS
AAATCTAACTTAGTTTCAAC+GGG 0.430928 8.4:+3418421 None:intergenic
TAGTGACAGTGAGGATGAAG+AGG 0.435461 8.4:-3418293 MS.gene012546:CDS
CAATTTGGAGAAGTCGGACT+TGG 0.441725 8.4:-3417426 MS.gene012546:CDS
AAATCGAATCCGGTGGTTGT+AGG 0.450153 8.4:-3418814 MS.gene012546:CDS
GTTCGACACTATTGATGATA+AGG 0.450965 8.4:-3415486 MS.gene012546:intron
AATGCCAGTGCTGGTGGTGG+TGG 0.452714 8.4:-3418736 MS.gene012546:CDS
ACCGCCACCACCACCAGCAC+TGG 0.454509 8.4:+3418732 None:intergenic
CGTTCTGTTATTGTGAATAA+CGG 0.459586 8.4:-3418655 MS.gene012546:CDS
TGTTGATGGGGATGCTGATA+AGG 0.462630 8.4:-3418383 MS.gene012546:CDS
GGAAGCTTCACGGAATGGTT+CGG 0.463640 8.4:-3416525 MS.gene012546:CDS
ATAGGCTCCAGAAGAAGGTT+AGG 0.465195 8.4:-3418537 MS.gene012546:CDS
AGTGCTGGTGGTGGTGGCGG+TGG 0.465276 8.4:-3418730 MS.gene012546:CDS
TCAGTGGCTGCAAGTCTTGA+AGG 0.467409 8.4:-3417205 MS.gene012546:CDS
GGCGTTCTATTGACATATTG+AGG 0.470946 8.4:-3416995 MS.gene012546:CDS
CAAGAGGAGGATTAATCCTC+TGG 0.471238 8.4:-3419173 MS.gene012546:CDS
CCTACACCCAGATTGATTGA+TGG 0.472241 8.4:-3415524 MS.gene012546:CDS
CGGATCATGTTGATGTTGAT+GGG 0.473173 8.4:-3418396 MS.gene012546:CDS
GAAGGTTGATTATTTGGCTA+AGG 0.473509 8.4:-3418356 MS.gene012546:CDS
TGGAGCTCCAGTCATGTTTG+TGG 0.474210 8.4:-3415092 MS.gene012546:CDS
CCAACAAATAAGACCAGGTC+AGG 0.474859 8.4:+3415726 None:intergenic
TTTGTTGGAGTTAATGGAGT+TGG 0.477015 8.4:-3416927 MS.gene012546:CDS
TGGAAGGGAGATGGATCTGA+TGG 0.483093 8.4:-3418766 MS.gene012546:CDS
AAGGATATCTTCCACAGTGC+AGG 0.486091 8.4:-3417161 MS.gene012546:intron
AAAATCTCGATACACGGTTC+TGG 0.486570 8.4:+3418894 None:intergenic
AAAATCTAACTTAGTTTCAA+CGG 0.490122 8.4:+3418420 None:intergenic
GAGCTGCTTATTCTCTCAAA+TGG 0.492519 8.4:-3419038 MS.gene012546:CDS
ATGGGGATGCTGATAAGGAT+AGG 0.493111 8.4:-3418378 MS.gene012546:CDS
CTTATTTGTTGGAGAAGCAC+TGG 0.493495 8.4:-3415715 MS.gene012546:CDS
GCTTGTGATACATTTCGATC+AGG 0.496091 8.4:-3416732 MS.gene012546:CDS
GTTAGGAATAAAGGCGGGAA+TGG 0.496788 8.4:-3418520 MS.gene012546:CDS
TGTAAATAGGCTCCAGAAGA+AGG 0.499134 8.4:-3418542 MS.gene012546:CDS
ATCTCGATACACGGTTCTGG+TGG 0.501240 8.4:+3418897 None:intergenic
GATGATGAGGATGATGATGC+TGG 0.501399 8.4:-3418265 MS.gene012546:CDS
GCGTTCTATTGACATATTGA+GGG 0.507989 8.4:-3416994 MS.gene012546:CDS
AGACCAGGTCAGGATTGTTA+AGG 0.512658 8.4:+3415736 None:intergenic
CTATTCCCACCTACAACCAC+CGG 0.515311 8.4:+3418805 None:intergenic
CCAGTCATGTTTGTGGGATG+CGG 0.515363 8.4:-3415085 MS.gene012546:CDS
TCAGATCCCTATATTTGAGA+AGG 0.520704 8.4:-3416591 MS.gene012546:intron
CTACACCCAGATTGATTGAT+GGG 0.521118 8.4:-3415523 MS.gene012546:CDS
ACGGTAACGGTTATAATTTG+AGG 0.521482 8.4:-3418636 MS.gene012546:CDS
CAGGAGCTGTTGAGCAGTTG+CGG 0.524608 8.4:-3416713 MS.gene012546:CDS
GAAATTGGCAACGCTTTGAA+AGG 0.527215 8.4:-3419141 MS.gene012546:CDS
GGAGCTCCAGTCATGTTTGT+GGG 0.528002 8.4:-3415091 MS.gene012546:CDS
CAGATCCCTATATTTGAGAA+GGG 0.528857 8.4:-3416590 MS.gene012546:CDS
GACGTTGAGTTTCTTGAGGT+CGG 0.531116 8.4:+3415051 None:intergenic
AAGCAATTCAGGAAGCTTCA+CGG 0.533244 8.4:-3416535 MS.gene012546:CDS
GGCGGCAATGGAAGATGCAC+TGG 0.533895 8.4:-3417036 MS.gene012546:CDS
CGACACAGCTGGTCGTATGC+AGG 0.535402 8.4:-3416489 MS.gene012546:intron
ATTCAGGAAGCTTCACGGAA+TGG 0.540152 8.4:-3416530 MS.gene012546:CDS
GGAACAAGGTGAGAGTATGA+TGG 0.543614 8.4:-3418335 MS.gene012546:CDS
TCGAATCCGGTGGTTGTAGG+TGG 0.545919 8.4:-3418811 MS.gene012546:CDS
TGTGCTCAGTATTGCTGGGA+AGG 0.545968 8.4:-3417450 MS.gene012546:intron
GATTCGATCTTGTCTTCTAG+AGG 0.546611 8.4:-3419100 MS.gene012546:CDS
TGTCTTCTAGAGGAGCGATC+TGG 0.547527 8.4:-3419090 MS.gene012546:CDS
GGATTTGAAGAAATCGAATC+CGG 0.550640 8.4:-3418824 MS.gene012546:CDS
CAATCTGGGTGTAGGAGATG+TGG 0.553386 8.4:+3415532 None:intergenic
AAAATCTACTAATCTTGCTA+AGG 0.553829 8.4:-3416904 MS.gene012546:intron
CAGGTGACATGGAAGGGAGA+TGG 0.559417 8.4:-3418775 MS.gene012546:CDS
CCGCATCCCACAAACATGAC+TGG 0.559796 8.4:+3415085 None:intergenic
ACCAGCTTTGAAAGCTCTGA+AGG 0.559926 8.4:-3417402 MS.gene012546:CDS
TTGAGAGAATAAGCAGCTCC+AGG 0.560375 8.4:+3419042 None:intergenic
AAACAGCAGGTGACATGGAA+GGG 0.561061 8.4:-3418781 MS.gene012546:CDS
GATTATTTGGCTAAGGAACA+AGG 0.566749 8.4:-3418349 MS.gene012546:CDS
GTTATTGTGAATAACGGTAA+CGG 0.570694 8.4:-3418649 MS.gene012546:CDS
CAATTTCATTGCATGACCAG+AGG 0.575171 8.4:+3419157 None:intergenic
GGATGCTGATAAGGATAGGA+AGG 0.575386 8.4:-3418374 MS.gene012546:CDS
GCAGTTGAAGATTGAAGCTG+AGG 0.579144 8.4:-3418857 MS.gene012546:CDS
AAGATCCCATCAATCAATCT+GGG 0.579799 8.4:+3415518 None:intergenic
CCATCAATCAATCTGGGTGT+AGG 0.581937 8.4:+3415524 None:intergenic
TGAAGCTGAGGCTCGTTCTG+AGG 0.584141 8.4:-3418845 MS.gene012546:CDS
ACTTGACGTTGAGTTTCTTG+AGG 0.584980 8.4:+3415047 None:intergenic
GAAACAGCAGGTGACATGGA+AGG 0.585391 8.4:-3418782 MS.gene012546:CDS
GGGAAGAAGAATGCCAGTGC+TGG 0.586484 8.4:-3418745 MS.gene012546:CDS
CTGATCAAAATCTCGATACA+CGG 0.587720 8.4:+3418888 None:intergenic
CTACCTTAACAATCCTGACC+TGG 0.587728 8.4:-3415739 MS.gene012546:CDS
TTTGTTGGAGAAGCACTGGT+TGG 0.588986 8.4:-3415711 MS.gene012546:CDS
GGTTATAATTTGAGGAGTAA+CGG 0.590987 8.4:-3418628 MS.gene012546:CDS
ATAGGAAACAGCAGGTGACA+TGG 0.591167 8.4:-3418786 MS.gene012546:CDS
GTTTGAAGAATGACGGTGAT+GGG 0.596520 8.4:-3418708 MS.gene012546:CDS
TGTTAAGCGTGAATTCTCGC+AGG 0.597191 8.4:-3418929 MS.gene012546:CDS
TTTAAGGAGCGTCTTCACAA+TGG 0.598414 8.4:+3415024 None:intergenic
TGCTTGTGCTCAGTATTGCT+GGG 0.598645 8.4:-3417454 MS.gene012546:intron
CGAATCCGGTGGTTGTAGGT+GGG 0.598863 8.4:-3418810 MS.gene012546:CDS
AGGTGGGAATAGGAAACAGC+AGG 0.600879 8.4:-3418794 MS.gene012546:CDS
AATTCTGCATCTGCTCTATG+TGG 0.603688 8.4:-3418968 MS.gene012546:CDS
TGAAGAGGATGATGATGATG+AGG 0.607270 8.4:-3418278 MS.gene012546:CDS
TTCATGCTGCAAAAGAGCAA+AGG 0.608654 8.4:-3416968 MS.gene012546:CDS
ATGATGAGGATGATGATGCT+GGG 0.610615 8.4:-3418264 MS.gene012546:CDS
ACACAATGTTAATGTCATGA+TGG 0.611925 8.4:-3416757 MS.gene012546:CDS
GAGAATGATAGTGTAAACAA+TGG 0.612652 8.4:-3418574 MS.gene012546:CDS
GATCGAATCAATGTATCGAT+CGG 0.617091 8.4:+3419114 None:intergenic
CTTCTCCAACAAATAAGACC+AGG 0.622372 8.4:+3415721 None:intergenic
GTTGTGCTAGTCGACACAGC+TGG 0.625758 8.4:-3416500 MS.gene012546:CDS
TCTTACAATTACGATGCACC+TGG 0.626789 8.4:-3419060 MS.gene012546:CDS
TCTCGATACACGGTTCTGGT+GGG 0.628791 8.4:+3418898 None:intergenic
AACAGACGCTGTTGTAACCA+AGG 0.629920 8.4:-3418491 MS.gene012546:CDS
AAGAATGCCAGTGCTGGTGG+TGG 0.631319 8.4:-3418739 MS.gene012546:CDS
GGAAGGGAGATGGATCTGAT+GGG 0.633548 8.4:-3418765 MS.gene012546:CDS
GAAGGCCAATTTGGAGAAGT+CGG 0.633774 8.4:-3417432 MS.gene012546:CDS
GGTTTGAAGAATGACGGTGA+TGG 0.634038 8.4:-3418709 MS.gene012546:CDS
AGAAGGTTAGGAATAAAGGC+GGG 0.636662 8.4:-3418525 MS.gene012546:CDS
CGTTATTCACAATAACAGAA+CGG 0.639458 8.4:+3418656 None:intergenic
GGCGGTGGTTTGAAGAATGA+CGG 0.640321 8.4:-3418715 MS.gene012546:CDS
TGAGAAGCTATGTGAATCAG+TGG 0.640944 8.4:-3417221 MS.gene012546:CDS
TCAGCTTTCAAAGTTCAACC+AGG 0.642481 8.4:-3415673 MS.gene012546:intron
AAGAAGAATGCCAGTGCTGG+TGG 0.643037 8.4:-3418742 MS.gene012546:CDS
TGGGTGTAGGAGATGTGGAA+AGG 0.654736 8.4:+3415537 None:intergenic
TAGACTCATGACCAAGAATG+TGG 0.655583 8.4:-3417378 MS.gene012546:intron
GGATCATGTTGATGTTGATG+GGG 0.663445 8.4:-3418395 MS.gene012546:CDS
TTTGAAGAAATCGAATCCGG+TGG 0.670497 8.4:-3418821 MS.gene012546:CDS
TCTAGAGGAGCGATCTGGTG+CGG 0.676914 8.4:-3419085 MS.gene012546:CDS
AAGAAGGTTAGGAATAAAGG+CGG 0.679488 8.4:-3418526 MS.gene012546:CDS
AATATGTCAATAGAACGCCT+AGG 0.693947 8.4:+3416999 None:intergenic
TAGAAACCAAACCTGCACTG+TGG 0.728001 8.4:+3417150 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAATTGTATATAAATAAA+AGG + chr8.4:3417124-3417143 None:intergenic 10.0%
!! ATAAATTAAATTGTTACTCT+TGG - chr8.4:3416496-3416515 MS.gene012546:CDS 15.0%
!! ATTGTATATAAATAAAAGGT+CGG + chr8.4:3417120-3417139 None:intergenic 15.0%
!!! TATTTAACTTGTAATGATAT+TGG - chr8.4:3416401-3416420 MS.gene012546:intron 15.0%
!! AAAAGGTAGTTAAGAAAAAT+AGG - chr8.4:3415760-3415779 MS.gene012546:CDS 20.0%
!! AAAATCTAACTTAGTTTCAA+CGG + chr8.4:3415802-3415821 None:intergenic 20.0%
!! AAAGGTAGTTAAGAAAAATA+GGG - chr8.4:3415761-3415780 MS.gene012546:CDS 20.0%
!! TAATCATTACCCATATTAAA+TGG + chr8.4:3418857-3418876 None:intergenic 20.0%
!! TATTCTTGATGAACATTTAT+TGG - chr8.4:3418811-3418830 MS.gene012546:CDS 20.0%
!! TCAATTCCAATAAACATAAA+AGG + chr8.4:3418308-3418327 None:intergenic 20.0%
!!! AAAAGTTTATTGGTTTTATG+GGG - chr8.4:3417778-3417797 MS.gene012546:intron 20.0%
!!! AAACAATAAAAGTATTGTCA+AGG + chr8.4:3416251-3416270 None:intergenic 20.0%
!!! AATGAACCTTTTATGTTTAT+TGG - chr8.4:3418299-3418318 MS.gene012546:CDS 20.0%
!!! CAAAAGTTTATTGGTTTTAT+GGG - chr8.4:3417777-3417796 MS.gene012546:intron 20.0%
!!! TAATTATGTTTGATTTTGTC+AGG - chr8.4:3419073-3419092 MS.gene012546:CDS 20.0%
!!! TGAAACTAAGTTAGATTTTA+CGG - chr8.4:3415803-3415822 MS.gene012546:intron 20.0%
!!! TTTTATGTTTATTGGAATTG+AGG - chr8.4:3418307-3418326 MS.gene012546:CDS 20.0%
!!! TTTTTCTTAACTACCTTTTT+CGG + chr8.4:3415759-3415778 None:intergenic 20.0%
! AAAATCTACTAATCTTGCTA+AGG - chr8.4:3417315-3417334 MS.gene012546:intron 25.0%
! AAATCTAACTTAGTTTCAAC+GGG + chr8.4:3415801-3415820 None:intergenic 25.0%
! AACTAGCAAAGACAAAATAA+AGG + chr8.4:3418969-3418988 None:intergenic 25.0%
! ACTAGCAAAGACAAAATAAA+GGG + chr8.4:3418968-3418987 None:intergenic 25.0%
! AGACAAAAAAATCCAATTCA+AGG + chr8.4:3416203-3416222 None:intergenic 25.0%
! AGTGTTATATTTCCTTGAAT+TGG - chr8.4:3416188-3416207 MS.gene012546:intron 25.0%
! AGTTAAGAAAAATAGGGTTT+GGG - chr8.4:3415767-3415786 MS.gene012546:CDS 25.0%
! AGTTTCTGCAACAAAATAAA+TGG + chr8.4:3418656-3418675 None:intergenic 25.0%
! ATAAATACATACCACATTCT+TGG + chr8.4:3416855-3416874 None:intergenic 25.0%
! CAACTTTGCAAGTAAATTTA+TGG - chr8.4:3418775-3418794 MS.gene012546:CDS 25.0%
! GAATAAGTGCATAAAAGATT+GGG + chr8.4:3418032-3418051 None:intergenic 25.0%
! GTTTCTGCAACAAAATAAAT+GGG + chr8.4:3418655-3418674 None:intergenic 25.0%
! TAAATTTATGGCTAAGCATT+TGG - chr8.4:3418787-3418806 MS.gene012546:CDS 25.0%
! TAAGACATATGTGCATTATT+AGG - chr8.4:3416368-3416387 MS.gene012546:intron 25.0%
! TAGAATGAATGGATATTAAG+TGG - chr8.4:3417994-3418013 MS.gene012546:intron 25.0%
! TAGTTAAGAAAAATAGGGTT+TGG - chr8.4:3415766-3415785 MS.gene012546:CDS 25.0%
! TTCGTTAGTCAATATAAAAC+CGG + chr8.4:3417865-3417884 None:intergenic 25.0%
! TTGTTGAAGCAAAAGTTTAT+TGG - chr8.4:3417768-3417787 MS.gene012546:intron 25.0%
!! AATACTATTGGTTATCTGTT+AGG - chr8.4:3417824-3417843 MS.gene012546:intron 25.0%
!!! AAAGTTTATTGGTTTTATGG+GGG - chr8.4:3417779-3417798 MS.gene012546:intron 25.0%
!!! ATTTATTTTGTTGCAGAAAC+TGG - chr8.4:3418655-3418674 MS.gene012546:CDS 25.0%
!!! CTGCATTATTTTTCAAAACA+CGG + chr8.4:3417164-3417183 None:intergenic 25.0%
!!! GCAAAAGTTTATTGGTTTTA+TGG - chr8.4:3417776-3417795 MS.gene012546:intron 25.0%
!!! GTTTTATATTGACTAACGAA+AGG - chr8.4:3417865-3417884 MS.gene012546:intron 25.0%
!!! TTACTAACTTCTAGAATGAA+TGG - chr8.4:3417983-3418002 MS.gene012546:intron 25.0%
AAAGACAAAATAAAGGGAAG+GGG + chr8.4:3418962-3418981 None:intergenic 30.0%
AATTACACTCTAAACTTCCT+TGG - chr8.4:3416313-3416332 MS.gene012546:intron 30.0%
ACACAATGTTAATGTCATGA+TGG - chr8.4:3417462-3417481 MS.gene012546:intron 30.0%
ACCAAATGACTCAATACTAT+TGG - chr8.4:3417812-3417831 MS.gene012546:intron 30.0%
AGTAACTGTTTCATTCAGTT+AGG + chr8.4:3417968-3417987 None:intergenic 30.0%
ATGAATAAGATTTCAACCCA+AGG + chr8.4:3416333-3416352 None:intergenic 30.0%
ATGATAAGGTATGCAAATAC+TGG - chr8.4:3418747-3418766 MS.gene012546:CDS 30.0%
ATTACACTCTAAACTTCCTT+GGG - chr8.4:3416314-3416333 MS.gene012546:intron 30.0%
ATTAGAGGTTCCATTTCTTA+AGG + chr8.4:3418067-3418086 None:intergenic 30.0%
CAAAGACAAAATAAAGGGAA+GGG + chr8.4:3418963-3418982 None:intergenic 30.0%
CATAACCCTTCTCAAATATA+GGG + chr8.4:3417637-3417656 None:intergenic 30.0%
CCAACAAATACAACAACATA+TGG + chr8.4:3417280-3417299 None:intergenic 30.0%
CCATATGTTGTTGTATTTGT+TGG - chr8.4:3417277-3417296 MS.gene012546:intron 30.0%
CGTTATTCACAATAACAGAA+CGG + chr8.4:3415566-3415585 None:intergenic 30.0%
CGTTCTGTTATTGTGAATAA+CGG - chr8.4:3415564-3415583 MS.gene012546:intron 30.0%
CTTGATGAACATTTATTGGT+TGG - chr8.4:3418815-3418834 MS.gene012546:CDS 30.0%
CTTTCAATGGTTTACATATC+TGG - chr8.4:3419107-3419126 MS.gene012546:CDS 30.0%
GGAAAATTGTCATAGTTGAA+TGG - chr8.4:3418328-3418347 MS.gene012546:CDS 30.0%
GGAATAAGTGCATAAAAGAT+TGG + chr8.4:3418033-3418052 None:intergenic 30.0%
GGTTATAATTTGAGGAGTAA+CGG - chr8.4:3415591-3415610 MS.gene012546:intron 30.0%
GTTATTGTGAATAACGGTAA+CGG - chr8.4:3415570-3415589 MS.gene012546:intron 30.0%
TAATGATGATTTACTGCAAG+TGG - chr8.4:3416277-3416296 MS.gene012546:intron 30.0%
TATAAAACCGGTATTAATCC+CGG + chr8.4:3417853-3417872 None:intergenic 30.0%
TATGTAAAAATTCCGTACGT+CGG - chr8.4:3417368-3417387 MS.gene012546:intron 30.0%
TCAAATATAGGGATCTGAAA+GGG + chr8.4:3417626-3417645 None:intergenic 30.0%
TCATAACCCTTCTCAAATAT+AGG + chr8.4:3417638-3417657 None:intergenic 30.0%
TGAATAAATTGAACCTAACC+TGG + chr8.4:3418567-3418586 None:intergenic 30.0%
TTAGAGGTTCCATTTCTTAA+GGG + chr8.4:3418066-3418085 None:intergenic 30.0%
! AAAAACTGGCTTCATTTACA+AGG - chr8.4:3417039-3417058 MS.gene012546:intron 30.0%
! ACCAATAGTATTGAGTCATT+TGG + chr8.4:3417816-3417835 None:intergenic 30.0%
! ATGGAGCTTTTGATGTAAAT+AGG - chr8.4:3415664-3415683 MS.gene012546:intron 30.0%
! GAGAATGATAGTGTAAACAA+TGG - chr8.4:3415645-3415664 MS.gene012546:intron 30.0%
! GTTGTATTTGTTGGAGTTAA+TGG - chr8.4:3417286-3417305 MS.gene012546:intron 30.0%
! TTGTCATAGTTGAATGGTTT+TGG - chr8.4:3418334-3418353 MS.gene012546:CDS 30.0%
!! GTTGGTAATGTTAGTGTAAA+TGG - chr8.4:3415618-3415637 MS.gene012546:intron 30.0%
!! TATGTTTGATTTTGTCAGGT+GGG - chr8.4:3419077-3419096 MS.gene012546:CDS 30.0%
!! TTATGTTTGATTTTGTCAGG+TGG - chr8.4:3419076-3419095 MS.gene012546:CDS 30.0%
!!! CGTGTTTTGAAAAATAATGC+AGG - chr8.4:3417162-3417181 MS.gene012546:CDS 30.0%
!!! GTTTTGAAAAATAATGCAGG+CGG - chr8.4:3417165-3417184 MS.gene012546:CDS 30.0%
AAATATAGGGATCTGAAAGG+GGG + chr8.4:3417624-3417643 None:intergenic 35.0%
AACAGAATCCCCTTAAGAAA+TGG - chr8.4:3418054-3418073 MS.gene012546:intron 35.0%
AACATCAATCGGAATCTATG+AGG + chr8.4:3416147-3416166 None:intergenic 35.0%
AACTGTTTCATTCAGTTAGG+CGG + chr8.4:3417965-3417984 None:intergenic 35.0%
AAGAAGGTTAGGAATAAAGG+CGG - chr8.4:3415693-3415712 MS.gene012546:CDS 35.0%
AAGACAAAATAAAGGGAAGG+GGG + chr8.4:3418961-3418980 None:intergenic 35.0%
AAGATCCCATCAATCAATCT+GGG + chr8.4:3418704-3418723 None:intergenic 35.0%
AAGCCTGATGCTAAAAAGAA+GGG - chr8.4:3415987-3416006 MS.gene012546:intron 35.0%
AAGTCTTGAAGGCAAAAAAC+TGG - chr8.4:3417025-3417044 MS.gene012546:CDS 35.0%
AAGTGCATAAAAGATTGGGA+GGG + chr8.4:3418028-3418047 None:intergenic 35.0%
AATATGTCAATAGAACGCCT+AGG + chr8.4:3417223-3417242 None:intergenic 35.0%
ATAAAACCGGTATTAATCCC+GGG + chr8.4:3417852-3417871 None:intergenic 35.0%
ATCCTCAACATCATTAGATG+TGG - chr8.4:3416873-3416892 MS.gene012546:intron 35.0%
ATCTGAAAGGGGGAATTATA+AGG + chr8.4:3417614-3417633 None:intergenic 35.0%
ATGTAAAAATTCCGTACGTC+GGG - chr8.4:3417369-3417388 MS.gene012546:intron 35.0%
ATTCATTCGATGCTTTCTTG+TGG + chr8.4:3418897-3418916 None:intergenic 35.0%
ATTCGTTTGAAAGTCAGGAA+AGG - chr8.4:3416425-3416444 MS.gene012546:intron 35.0%
CAAATATAGGGATCTGAAAG+GGG + chr8.4:3417625-3417644 None:intergenic 35.0%
CAATCAAAGCAACATGTAAG+AGG + chr8.4:3416536-3416555 None:intergenic 35.0%
CAGAAGAAGGTTAGGAATAA+AGG - chr8.4:3415690-3415709 MS.gene012546:CDS 35.0%
CAGATCCCTATATTTGAGAA+GGG - chr8.4:3417629-3417648 MS.gene012546:intron 35.0%
CTATCACTGTTTCAGTTTCT+AGG - chr8.4:3418249-3418268 MS.gene012546:CDS 35.0%
CTCAAATATAGGGATCTGAA+AGG + chr8.4:3417627-3417646 None:intergenic 35.0%
CTGATCAAAATCTCGATACA+CGG + chr8.4:3415334-3415353 None:intergenic 35.0%
CTGCATAATCACACAGAAAA+TGG + chr8.4:3417422-3417441 None:intergenic 35.0%
CTTTATTCCTAACCTTCTTC+TGG + chr8.4:3415692-3415711 None:intergenic 35.0%
GAAAATGGAATATCTCCTTC+AGG + chr8.4:3417407-3417426 None:intergenic 35.0%
GATTATTTGGCTAAGGAACA+AGG - chr8.4:3415870-3415889 MS.gene012546:intron 35.0%
GCAAAGACAAAATAAAGGGA+AGG + chr8.4:3418964-3418983 None:intergenic 35.0%
GCACATATGTCTTAAAGCAA+AGG + chr8.4:3416362-3416381 None:intergenic 35.0%
GCGTTCTATTGACATATTGA+GGG - chr8.4:3417225-3417244 MS.gene012546:CDS 35.0%
GGAGACTGTCCATTTAATAT+GGG - chr8.4:3418845-3418864 MS.gene012546:CDS 35.0%
GGATTTGAAGAAATCGAATC+CGG - chr8.4:3415395-3415414 MS.gene012546:intron 35.0%
GGGTTCAATAACAGACTTAT+GGG + chr8.4:3418635-3418654 None:intergenic 35.0%
TAAGTGCATAAAAGATTGGG+AGG + chr8.4:3418029-3418048 None:intergenic 35.0%
TACTAATCTTGCTAAGGTGA+AGG - chr8.4:3417321-3417340 MS.gene012546:intron 35.0%
TAGAGGTTCCATTTCTTAAG+GGG + chr8.4:3418065-3418084 None:intergenic 35.0%
TCAAGCAACACAACATCAAT+CGG + chr8.4:3416158-3416177 None:intergenic 35.0%
TCAATCAAAGTAGCAGATCA+AGG + chr8.4:3416652-3416671 None:intergenic 35.0%
TCACAAGGAAAATGGAAACA+GGG + chr8.4:3416586-3416605 None:intergenic 35.0%
TCAGATCCCTATATTTGAGA+AGG - chr8.4:3417628-3417647 MS.gene012546:intron 35.0%
TCATGGCCCATTTCATTATT+GGG - chr8.4:3418216-3418235 MS.gene012546:CDS 35.0%
TGAGATGGAAACAAAATCAG+CGG + chr8.4:3418925-3418944 None:intergenic 35.0%
TGGGTTCAATAACAGACTTA+TGG + chr8.4:3418636-3418655 None:intergenic 35.0%
TTCATCTTACATGTCACTGA+TGG - chr8.4:3418412-3418431 MS.gene012546:CDS 35.0%
TTCATGGCCCATTTCATTAT+TGG - chr8.4:3418215-3418234 MS.gene012546:CDS 35.0%
TTGGTATTCGTTTGAAAGTC+AGG - chr8.4:3416420-3416439 MS.gene012546:intron 35.0%
TTTCAAAGTTCAACCAGGTT+AGG - chr8.4:3418551-3418570 MS.gene012546:CDS 35.0%
TTTCTTAAGGGGATTCTGTT+AGG + chr8.4:3418054-3418073 None:intergenic 35.0%
TTTGTTGGAGTTAATGGAGT+TGG - chr8.4:3417292-3417311 MS.gene012546:intron 35.0%
! ACGGTAACGGTTATAATTTG+AGG - chr8.4:3415583-3415602 MS.gene012546:intron 35.0%
! AGCTTTGTCCAACTACAATT+GGG - chr8.4:3418592-3418611 MS.gene012546:CDS 35.0%
! CATTTTCTGTGTGATTATGC+AGG - chr8.4:3417420-3417439 MS.gene012546:CDS 35.0%
! GAAGGTTGATTATTTGGCTA+AGG - chr8.4:3415863-3415882 MS.gene012546:intron 35.0%
! GATCGAATCAATGTATCGAT+CGG + chr8.4:3415108-3415127 None:intergenic 35.0%
! GGATAGGAAGGTTGATTATT+TGG - chr8.4:3415857-3415876 MS.gene012546:intron 35.0%
! GTTCGACACTATTGATGATA+AGG - chr8.4:3418733-3418752 MS.gene012546:CDS 35.0%
! TGAACATTTATTGGTTGGCT+AGG - chr8.4:3418820-3418839 MS.gene012546:CDS 35.0%
! TGGACTTTTCACAATGATCT+AGG - chr8.4:3415201-3415220 MS.gene012546:intron 35.0%
! TGTTTCCATTTTCCTTGTGA+CGG - chr8.4:3416586-3416605 MS.gene012546:CDS 35.0%
!! TAGCTTTGTCCAACTACAAT+TGG - chr8.4:3418591-3418610 MS.gene012546:CDS 35.0%
!! TTACATTCTGTGTCACTTGT+AGG - chr8.4:3416962-3416981 MS.gene012546:CDS 35.0%
!!! CAGTTACTGATTTTCACAAG+AGG - chr8.4:3415030-3415049 MS.gene012546:CDS 35.0%
!!! GATTTTTAGTAGTGACAGTG+AGG - chr8.4:3415917-3415936 MS.gene012546:intron 35.0%
!!! TGGTTCGTATTTTAACTCCT+AGG - chr8.4:3417203-3417222 MS.gene012546:CDS 35.0%
!!! TTACTGATTTTCACAAGAGG+AGG - chr8.4:3415033-3415052 MS.gene012546:CDS 35.0%
AAAAATAATGCAGGCGGCAA+TGG - chr8.4:3417171-3417190 MS.gene012546:CDS 40.0%
AAAATCTCGATACACGGTTC+TGG + chr8.4:3415328-3415347 None:intergenic 40.0%
AAATTGAGCCACGCTCTTAT+AGG - chr8.4:3417888-3417907 MS.gene012546:intron 40.0%
AAGCAATTCAGGAAGCTTCA+CGG - chr8.4:3417684-3417703 MS.gene012546:intron 40.0%
AAGTTCAGCAAGTTTACCTC+TGG + chr8.4:3416031-3416050 None:intergenic 40.0%
AATTCTGCATCTGCTCTATG+TGG - chr8.4:3415251-3415270 MS.gene012546:intron 40.0%
ACGGATCATGTTGATGTTGA+TGG - chr8.4:3415822-3415841 MS.gene012546:intron 40.0%
ACTTGACGTTGAGTTTCTTG+AGG + chr8.4:3419175-3419194 None:intergenic 40.0%
AGAAGACTTAAGAGAGCTGA+TGG + chr8.4:3418103-3418122 None:intergenic 40.0%
AGAAGGTTAGGAATAAAGGC+GGG - chr8.4:3415694-3415713 MS.gene012546:CDS 40.0%
AGTAGGATATTCCTCTCTGA+AGG + chr8.4:3417942-3417961 None:intergenic 40.0%
AGTATAGAGTATACCCTCCA+AGG - chr8.4:3418156-3418175 MS.gene012546:intron 40.0%
CAAGATCCCATCAATCAATC+TGG + chr8.4:3418705-3418724 None:intergenic 40.0%
CAAGCCTGATGCTAAAAAGA+AGG - chr8.4:3415986-3416005 MS.gene012546:intron 40.0%
CAATTTCATTGCATGACCAG+AGG + chr8.4:3415065-3415084 None:intergenic 40.0%
CACCACATCTAATGATGTTG+AGG + chr8.4:3416878-3416897 None:intergenic 40.0%
CGGAGACTGTCCATTTAATA+TGG - chr8.4:3418844-3418863 MS.gene012546:CDS 40.0%
CGGATCATGTTGATGTTGAT+GGG - chr8.4:3415823-3415842 MS.gene012546:intron 40.0%
CTACACCCAGATTGATTGAT+GGG - chr8.4:3418696-3418715 MS.gene012546:CDS 40.0%
CTCAACATCATTAGATGTGG+TGG - chr8.4:3416876-3416895 MS.gene012546:intron 40.0%
CTCTGGTCATGCAATGAAAT+TGG - chr8.4:3415063-3415082 MS.gene012546:CDS 40.0%
CTGATGCTAAAAAGAAGGGT+TGG - chr8.4:3415991-3416010 MS.gene012546:intron 40.0%
CTGGAGCCCAATAATGAAAT+GGG + chr8.4:3418225-3418244 None:intergenic 40.0%
CTTCTCCAACAAATAAGACC+AGG + chr8.4:3418501-3418520 None:intergenic 40.0%
GAGCTGCTTATTCTCTCAAA+TGG - chr8.4:3415181-3415200 MS.gene012546:intron 40.0%
GATTCGATCTTGTCTTCTAG+AGG - chr8.4:3415119-3415138 MS.gene012546:CDS 40.0%
GCTTGTGATACATTTCGATC+AGG - chr8.4:3417487-3417506 MS.gene012546:intron 40.0%
GGATCATGTTGATGTTGATG+GGG - chr8.4:3415824-3415843 MS.gene012546:intron 40.0%
GGCGTTCTATTGACATATTG+AGG - chr8.4:3417224-3417243 MS.gene012546:CDS 40.0%
GTACTATCTCTTGACAGCAA+AGG + chr8.4:3418275-3418294 None:intergenic 40.0%
GTCACAAGGAAAATGGAAAC+AGG + chr8.4:3416587-3416606 None:intergenic 40.0%
GTTTGAAGAATGACGGTGAT+GGG - chr8.4:3415511-3415530 MS.gene012546:CDS 40.0%
TAATGAAATGGGCCATGAAG+AGG + chr8.4:3418214-3418233 None:intergenic 40.0%
TAGACTCATGACCAAGAATG+TGG - chr8.4:3416841-3416860 MS.gene012546:intron 40.0%
TCAGCTTTCAAAGTTCAACC+AGG - chr8.4:3418546-3418565 MS.gene012546:CDS 40.0%
TCTTACAATTACGATGCACC+TGG - chr8.4:3415159-3415178 MS.gene012546:intron 40.0%
TGAAAAAGATCCTGCTGTTG+TGG - chr8.4:3417655-3417674 MS.gene012546:intron 40.0%
TGAGAAGCTATGTGAATCAG+TGG - chr8.4:3416998-3417017 MS.gene012546:CDS 40.0%
TGATGATTTACTGCAAGTGG+TGG - chr8.4:3416280-3416299 MS.gene012546:intron 40.0%
TGATTATGCAGGTTGCTTAC+TGG - chr8.4:3417431-3417450 MS.gene012546:CDS 40.0%
TGTAAATAGGCTCCAGAAGA+AGG - chr8.4:3415677-3415696 MS.gene012546:CDS 40.0%
TGTGGCAAAAGAAGCAATTC+AGG - chr8.4:3417673-3417692 MS.gene012546:intron 40.0%
TTCATGCTGCAAAAGAGCAA+AGG - chr8.4:3417251-3417270 MS.gene012546:intron 40.0%
TTGGTTATCTGTTAGGAACC+CGG - chr8.4:3417831-3417850 MS.gene012546:intron 40.0%
TTTGAAGAAATCGAATCCGG+TGG - chr8.4:3415398-3415417 MS.gene012546:intron 40.0%
TTTGACAGTGCTCTCATCAA+TGG + chr8.4:3418454-3418473 None:intergenic 40.0%
! ACATGTCACTGATGGTTTTC+AGG - chr8.4:3418420-3418439 MS.gene012546:CDS 40.0%
! ATGATGAGGATGATGATGCT+GGG - chr8.4:3415955-3415974 MS.gene012546:intron 40.0%
! CATTTATTGGTTGGCTAGGA+CGG - chr8.4:3418824-3418843 MS.gene012546:CDS 40.0%
! CTTATTTGTTGGAGAAGCAC+TGG - chr8.4:3418504-3418523 MS.gene012546:CDS 40.0%
! GAAATTGGCAACGCTTTGAA+AGG - chr8.4:3415078-3415097 MS.gene012546:CDS 40.0%
! GGTTTTCATCTATGTTCCAG+AGG - chr8.4:3416012-3416031 MS.gene012546:intron 40.0%
! TCTGGAGCCCAATAATGAAA+TGG + chr8.4:3418226-3418245 None:intergenic 40.0%
! TGAAGAGGATGATGATGATG+AGG - chr8.4:3415941-3415960 MS.gene012546:intron 40.0%
! TTGGAGGGTATACTCTATAC+TGG + chr8.4:3418157-3418176 None:intergenic 40.0%
!! AATGACGGTGATGGGAAAAA+TGG - chr8.4:3415519-3415538 MS.gene012546:CDS 40.0%
!! ATGACGGTGATGGGAAAAAT+GGG - chr8.4:3415520-3415539 MS.gene012546:CDS 40.0%
!! CAACCCTTCTTTTTAGCATC+AGG + chr8.4:3415993-3416012 None:intergenic 40.0%
!! TTTAAGGAGCGTCTTCACAA+TGG + chr8.4:3419198-3419217 None:intergenic 40.0%
AAACAGCAGGTGACATGGAA+GGG - chr8.4:3415438-3415457 MS.gene012546:intron 45.0%
AAATCGAATCCGGTGGTTGT+AGG - chr8.4:3415405-3415424 MS.gene012546:intron 45.0%
AACAGACGCTGTTGTAACCA+AGG - chr8.4:3415728-3415747 MS.gene012546:CDS 45.0%
AAGGATATCTTCCACAGTGC+AGG - chr8.4:3417058-3417077 MS.gene012546:intron 45.0%
AGACCAGGTCAGGATTGTTA+AGG + chr8.4:3418486-3418505 None:intergenic 45.0%
AGAGCTGATGGTTAATGACG+TGG + chr8.4:3418091-3418110 None:intergenic 45.0%
AGAGTATACCCTCCAAGGTT+TGG - chr8.4:3418123-3418142 MS.gene012546:intron 45.0%
ATAGGAAACAGCAGGTGACA+TGG - chr8.4:3415433-3415452 MS.gene012546:intron 45.0%
ATAGGCTCCAGAAGAAGGTT+AGG - chr8.4:3415682-3415701 MS.gene012546:CDS 45.0%
ATGCTTGTGCTCAGTATTGC+TGG - chr8.4:3416764-3416783 MS.gene012546:CDS 45.0%
ATGGGGATGCTGATAAGGAT+AGG - chr8.4:3415841-3415860 MS.gene012546:intron 45.0%
ATTCAGGAAGCTTCACGGAA+TGG - chr8.4:3417689-3417708 MS.gene012546:intron 45.0%
CAAGAGGAGGATTAATCCTC+TGG - chr8.4:3415046-3415065 MS.gene012546:CDS 45.0%
CAAGTCCGACTTCTCCAAAT+TGG + chr8.4:3416795-3416814 None:intergenic 45.0%
CAATTTGGAGAAGTCGGACT+TGG - chr8.4:3416793-3416812 MS.gene012546:intron 45.0%
CCAACAAATAAGACCAGGTC+AGG + chr8.4:3418496-3418515 None:intergenic 45.0%
CCACAATCTGATCCTCTTCA+TGG - chr8.4:3418199-3418218 MS.gene012546:intron 45.0%
CCATCAATCAATCTGGGTGT+AGG + chr8.4:3418698-3418717 None:intergenic 45.0%
CCATGAAGAGGATCAGATTG+TGG + chr8.4:3418202-3418221 None:intergenic 45.0%
CCTACACCCAGATTGATTGA+TGG - chr8.4:3418695-3418714 MS.gene012546:CDS 45.0%
CGATACCGTCACAAGGAAAA+TGG + chr8.4:3416594-3416613 None:intergenic 45.0%
CTACCTTAACAATCCTGACC+TGG - chr8.4:3418480-3418499 MS.gene012546:CDS 45.0%
CTGAAACAGTGATAGAGCTC+TGG + chr8.4:3418244-3418263 None:intergenic 45.0%
GAAGGCCAATTTGGAGAAGT+CGG - chr8.4:3416787-3416806 MS.gene012546:intron 45.0%
GACGAAGACCCAATTGTAGT+TGG + chr8.4:3418603-3418622 None:intergenic 45.0%
GACGTTGAGTTTCTTGAGGT+CGG + chr8.4:3419171-3419190 None:intergenic 45.0%
GAGGATCAGATTGTGGATAC+TGG + chr8.4:3418195-3418214 None:intergenic 45.0%
GAGTATACCCTCCAAGGTTT+GGG - chr8.4:3418124-3418143 MS.gene012546:intron 45.0%
GAGTTTCTTGAGGTCGGTAT+AGG + chr8.4:3419165-3419184 None:intergenic 45.0%
GCAGTTGAAGATTGAAGCTG+AGG - chr8.4:3415362-3415381 MS.gene012546:intron 45.0%
GGATGCTGATAAGGATAGGA+AGG - chr8.4:3415845-3415864 MS.gene012546:intron 45.0%
GGTTAATGACGTGGCATTAG+AGG + chr8.4:3418082-3418101 None:intergenic 45.0%
GGTTTGAAGAATGACGGTGA+TGG - chr8.4:3415510-3415529 MS.gene012546:CDS 45.0%
GTCGGCATCAAATGTCGATA+GGG + chr8.4:3417102-3417121 None:intergenic 45.0%
GTTAGGAATAAAGGCGGGAA+TGG - chr8.4:3415699-3415718 MS.gene012546:CDS 45.0%
TAAAAAGCAAGCCCGACGTA+CGG + chr8.4:3417383-3417402 None:intergenic 45.0%
TAAAAGATTGGGAGGGTAGC+TGG + chr8.4:3418021-3418040 None:intergenic 45.0%
TAGAAACCAAACCTGCACTG+TGG + chr8.4:3417072-3417091 None:intergenic 45.0%
TAGGAACCCGGGATTAATAC+CGG - chr8.4:3417843-3417862 MS.gene012546:intron 45.0%
TAGTGACAGTGAGGATGAAG+AGG - chr8.4:3415926-3415945 MS.gene012546:intron 45.0%
TATCTTCCACAGTGCAGGTT+TGG - chr8.4:3417063-3417082 MS.gene012546:intron 45.0%
TATTGCTGGGAAGGCCAATT+TGG - chr8.4:3416778-3416797 MS.gene012546:CDS 45.0%
TCCTTCAGAGCTTTCAAAGC+TGG + chr8.4:3416821-3416840 None:intergenic 45.0%
TGCTTGTGCTCAGTATTGCT+GGG - chr8.4:3416765-3416784 MS.gene012546:CDS 45.0%
TGGTTATCTGTTAGGAACCC+GGG - chr8.4:3417832-3417851 MS.gene012546:intron 45.0%
TGTTAAGCGTGAATTCTCGC+AGG - chr8.4:3415290-3415309 MS.gene012546:intron 45.0%
TTCATTCAGTTAGGCGGAGT+AGG + chr8.4:3417959-3417978 None:intergenic 45.0%
TTGAGAGAATAAGCAGCTCC+AGG + chr8.4:3415180-3415199 None:intergenic 45.0%
! GATGATGAGGATGATGATGC+TGG - chr8.4:3415954-3415973 MS.gene012546:intron 45.0%
! GGAACAAGGTGAGAGTATGA+TGG - chr8.4:3415884-3415903 MS.gene012546:intron 45.0%
! GTTGCTTTCCTATAAGAGCG+TGG + chr8.4:3417899-3417918 None:intergenic 45.0%
! TGTTGATGGGGATGCTGATA+AGG - chr8.4:3415836-3415855 MS.gene012546:intron 45.0%
!! ACCAGCTTTGAAAGCTCTGA+AGG - chr8.4:3416817-3416836 MS.gene012546:intron 45.0%
!! CCTGACCTGGTCTTATTTGT+TGG - chr8.4:3418493-3418512 MS.gene012546:CDS 45.0%
!! CTTCTAGAGTATACCCTCCA+AGG - chr8.4:3418118-3418137 MS.gene012546:intron 45.0%
!! GAAAGTCAGGAAAGGTGTTG+AGG - chr8.4:3416433-3416452 MS.gene012546:intron 45.0%
!! TTGAGGAGTAACGGTGTTGT+TGG - chr8.4:3415600-3415619 MS.gene012546:intron 45.0%
!! TTTGTTGGAGAAGCACTGGT+TGG - chr8.4:3418508-3418527 MS.gene012546:CDS 45.0%
!!! GGGCTTGCTTTTTAACCTGA+AGG - chr8.4:3417389-3417408 MS.gene012546:CDS 45.0%
AACCAAGGCTGAGCCGAAAA+AGG - chr8.4:3415743-3415762 MS.gene012546:CDS 50.0%
AGGTGGGAATAGGAAACAGC+AGG - chr8.4:3415425-3415444 MS.gene012546:intron 50.0%
CAATCTGGGTGTAGGAGATG+TGG + chr8.4:3418690-3418709 None:intergenic 50.0%
CCAGTCATGTTTGTGGGATG+CGG - chr8.4:3419134-3419153 MS.gene012546:CDS 50.0%
CCTTGTGACGGTATCGTCTT+GGG - chr8.4:3416598-3416617 MS.gene012546:intron 50.0%
CTATTCCCACCTACAACCAC+CGG + chr8.4:3415417-3415436 None:intergenic 50.0%
GAAACAGCAGGTGACATGGA+AGG - chr8.4:3415437-3415456 MS.gene012546:intron 50.0%
GGAAGCTTCACGGAATGGTT+CGG - chr8.4:3417694-3417713 MS.gene012546:intron 50.0%
GGAAGGGAGATGGATCTGAT+GGG - chr8.4:3415454-3415473 MS.gene012546:intron 50.0%
GGAGCTCCAGTCATGTTTGT+GGG - chr8.4:3419128-3419147 MS.gene012546:CDS 50.0%
GGCGAAATACATGGGTGAGA+TGG + chr8.4:3418940-3418959 None:intergenic 50.0%
GGCGGTGGTTTGAAGAATGA+CGG - chr8.4:3415504-3415523 MS.gene012546:CDS 50.0%
GGTCGGCATCAAATGTCGAT+AGG + chr8.4:3417103-3417122 None:intergenic 50.0%
TCAGTGGCTGCAAGTCTTGA+AGG - chr8.4:3417014-3417033 MS.gene012546:CDS 50.0%
TCCTTGTGACGGTATCGTCT+TGG - chr8.4:3416597-3416616 MS.gene012546:intron 50.0%
TGGAAGGGAGATGGATCTGA+TGG - chr8.4:3415453-3415472 MS.gene012546:intron 50.0%
TGGAGCTCCAGTCATGTTTG+TGG - chr8.4:3419127-3419146 MS.gene012546:CDS 50.0%
TGGGTGTAGGAGATGTGGAA+AGG + chr8.4:3418685-3418704 None:intergenic 50.0%
TGTGCTCAGTATTGCTGGGA+AGG - chr8.4:3416769-3416788 MS.gene012546:CDS 50.0%
! AAGAAGAATGCCAGTGCTGG+TGG - chr8.4:3415477-3415496 MS.gene012546:intron 50.0%
! ATCTCGATACACGGTTCTGG+TGG + chr8.4:3415325-3415344 None:intergenic 50.0%
! ATTCCTCTCTGAAGGAGCCT+TGG + chr8.4:3417934-3417953 None:intergenic 50.0%
! GCTTCTTTTGCCACAACAGC+AGG + chr8.4:3417668-3417687 None:intergenic 50.0%
! GTTGAGGTCAGGGGCATATA+TGG - chr8.4:3416449-3416468 MS.gene012546:intron 50.0%
! TCTCGATACACGGTTCTGGT+GGG + chr8.4:3415324-3415343 None:intergenic 50.0%
! TGTCTTCTAGAGGAGCGATC+TGG - chr8.4:3415129-3415148 MS.gene012546:intron 50.0%
!! AGGAAAGGTGTTGAGGTCAG+GGG - chr8.4:3416440-3416459 MS.gene012546:intron 50.0%
!! CAGGAAAGGTGTTGAGGTCA+GGG - chr8.4:3416439-3416458 MS.gene012546:intron 50.0%
!! TCAGGAAAGGTGTTGAGGTC+AGG - chr8.4:3416438-3416457 MS.gene012546:intron 50.0%
!! TCTGTGTCACTTGTAGGCTG+AGG - chr8.4:3416968-3416987 MS.gene012546:CDS 50.0%
!!! TACCTTTTTCGGCTCAGCCT+TGG + chr8.4:3415748-3415767 None:intergenic 50.0%
ACCCTCCAAGGTTTGCGATG+TGG - chr8.4:3418130-3418149 MS.gene012546:intron 55.0%
AGGGAAGGGGGCGAAATACA+TGG + chr8.4:3418949-3418968 None:intergenic 55.0%
CAGGAGCTGTTGAGCAGTTG+CGG - chr8.4:3417506-3417525 MS.gene012546:intron 55.0%
CAGGTGACATGGAAGGGAGA+TGG - chr8.4:3415444-3415463 MS.gene012546:intron 55.0%
CCCAAGACGATACCGTCACA+AGG + chr8.4:3416601-3416620 None:intergenic 55.0%
CCCACATCCCAAACCTTGGA+GGG + chr8.4:3418172-3418191 None:intergenic 55.0%
CCCACATCGCAAACCTTGGA+GGG + chr8.4:3418134-3418153 None:intergenic 55.0%
CCCTCCAAGGTTTGCGATGT+GGG - chr8.4:3418131-3418150 MS.gene012546:intron 55.0%
CCGCATCCCACAAACATGAC+TGG + chr8.4:3419137-3419156 None:intergenic 55.0%
CGAATCCGGTGGTTGTAGGT+GGG - chr8.4:3415409-3415428 MS.gene012546:intron 55.0%
CGGTGGTTGTAGGTGGGAAT+AGG - chr8.4:3415415-3415434 MS.gene012546:intron 55.0%
GACTCATGCACGCAGACTTC+AGG - chr8.4:3417528-3417547 MS.gene012546:intron 55.0%
GGGAAGAAGAATGCCAGTGC+TGG - chr8.4:3415474-3415493 MS.gene012546:intron 55.0%
GGGAAGGGGGCGAAATACAT+GGG + chr8.4:3418948-3418967 None:intergenic 55.0%
GGTGGGAGCTGCACTTTCAA+TGG - chr8.4:3419094-3419113 MS.gene012546:CDS 55.0%
GTTGTGCTAGTCGACACAGC+TGG - chr8.4:3417719-3417738 MS.gene012546:intron 55.0%
TCGAATCCGGTGGTTGTAGG+TGG - chr8.4:3415408-3415427 MS.gene012546:intron 55.0%
TCTAGAGGAGCGATCTGGTG+CGG - chr8.4:3415134-3415153 MS.gene012546:intron 55.0%
TGAAGCTGAGGCTCGTTCTG+AGG - chr8.4:3415374-3415393 MS.gene012546:intron 55.0%
! ACCCTCCAAGGTTTGGGATG+TGG - chr8.4:3418168-3418187 MS.gene012546:intron 55.0%
! CCCTCCAAGGTTTGGGATGT+GGG - chr8.4:3418169-3418188 MS.gene012546:intron 55.0%
!! AAGAATGCCAGTGCTGGTGG+TGG - chr8.4:3415480-3415499 MS.gene012546:intron 55.0%
CGACACAGCTGGTCGTATGC+AGG - chr8.4:3417730-3417749 MS.gene012546:intron 60.0%
CTGGCCCACATCCCAAACCT+TGG + chr8.4:3418176-3418195 None:intergenic 60.0%
CTGGCCCACATCGCAAACCT+TGG + chr8.4:3418138-3418157 None:intergenic 60.0%
GAGCCAAGGCTCCTTCAGAG+AGG - chr8.4:3417928-3417947 MS.gene012546:intron 60.0%
GCAACAGACCACCTGAGCCA+AGG - chr8.4:3417914-3417933 MS.gene012546:intron 60.0%
GCCCACATCCCAAACCTTGG+AGG + chr8.4:3418173-3418192 None:intergenic 60.0%
GCCCACATCGCAAACCTTGG+AGG + chr8.4:3418135-3418154 None:intergenic 60.0%
GGCGGCAATGGAAGATGCAC+TGG - chr8.4:3417183-3417202 MS.gene012546:CDS 60.0%
TGAAGGAGCCTTGGCTCAGG+TGG + chr8.4:3417925-3417944 None:intergenic 60.0%
! CTCTGAAGGAGCCTTGGCTC+AGG + chr8.4:3417928-3417947 None:intergenic 60.0%
!! AATGCCAGTGCTGGTGGTGG+TGG - chr8.4:3415483-3415502 MS.gene012546:intron 60.0%
ACCGCCACCACCACCAGCAC+TGG + chr8.4:3415490-3415509 None:intergenic 70.0%
!! AGTGCTGGTGGTGGTGGCGG+TGG - chr8.4:3415489-3415508 MS.gene012546:CDS 70.0%
!! GCCAGTGCTGGTGGTGGTGG+CGG - chr8.4:3415486-3415505 MS.gene012546:intron 70.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 3415021 3419220 3415021 ID=MS.gene012546
chr8.4 mRNA 3415021 3419220 3415021 ID=MS.gene012546.t1;Parent=MS.gene012546
chr8.4 exon 3418208 3419220 3418208 ID=MS.gene012546.t1.exon1;Parent=MS.gene012546.t1
chr8.4 CDS 3418208 3419220 3418208 ID=cds.MS.gene012546.t1;Parent=MS.gene012546.t1
chr8.4 exon 3417379 3417463 3417379 ID=MS.gene012546.t1.exon2;Parent=MS.gene012546.t1
chr8.4 CDS 3417379 3417463 3417379 ID=cds.MS.gene012546.t1;Parent=MS.gene012546.t1
chr8.4 exon 3417162 3417257 3417162 ID=MS.gene012546.t1.exon3;Parent=MS.gene012546.t1
chr8.4 CDS 3417162 3417257 3417162 ID=cds.MS.gene012546.t1;Parent=MS.gene012546.t1
chr8.4 exon 3416905 3417057 3416905 ID=MS.gene012546.t1.exon4;Parent=MS.gene012546.t1
chr8.4 CDS 3416905 3417057 3416905 ID=cds.MS.gene012546.t1;Parent=MS.gene012546.t1
chr8.4 exon 3416692 3416799 3416692 ID=MS.gene012546.t1.exon5;Parent=MS.gene012546.t1
chr8.4 CDS 3416692 3416799 3416692 ID=cds.MS.gene012546.t1;Parent=MS.gene012546.t1
chr8.4 exon 3416490 3416609 3416490 ID=MS.gene012546.t1.exon6;Parent=MS.gene012546.t1
chr8.4 CDS 3416490 3416609 3416490 ID=cds.MS.gene012546.t1;Parent=MS.gene012546.t1
chr8.4 exon 3415674 3415799 3415674 ID=MS.gene012546.t1.exon7;Parent=MS.gene012546.t1
chr8.4 CDS 3415674 3415799 3415674 ID=cds.MS.gene012546.t1;Parent=MS.gene012546.t1
chr8.4 exon 3415487 3415570 3415487 ID=MS.gene012546.t1.exon8;Parent=MS.gene012546.t1
chr8.4 CDS 3415487 3415570 3415487 ID=cds.MS.gene012546.t1;Parent=MS.gene012546.t1
chr8.4 exon 3415021 3415146 3415021 ID=MS.gene012546.t1.exon9;Parent=MS.gene012546.t1
chr8.4 CDS 3415021 3415146 3415021 ID=cds.MS.gene012546.t1;Parent=MS.gene012546.t1
Gene Sequence

>MS.gene012546

ATGTTAGAGCAGTTACTGATTTTCACAAGAGGAGGATTAATCCTCTGGTCATGCAATGAAATTGGCAACGCTTTGAAAGGATCACCGATCGATACATTGATTCGATCTTGTCTTCTAGAGGAGCGATCTGGTGCGGCATCTTACAATTACGATGCACCTGGAGCTGCTTATTCTCTCAAATGGACTTTTCACAATGATCTAGGTCTTGTTTTCGTTGCTGTTTATCAGAGAATTCTGCATCTGCTCTATGTGGATGATTTGCTTGCTGCTGTTAAGCGTGAATTCTCGCAGGTTTATGATCCCACCAGAACCGTGTATCGAGATTTTGATCAGATTTTTAAGCAGTTGAAGATTGAAGCTGAGGCTCGTTCTGAGGATTTGAAGAAATCGAATCCGGTGGTTGTAGGTGGGAATAGGAAACAGCAGGTGACATGGAAGGGAGATGGATCTGATGGGAAGAAGAATGCCAGTGCTGGTGGTGGTGGCGGTGGTTTGAAGAATGACGGTGATGGGAAAAATGGGAAGAAGAATTCTGATAATGACCGTTCTGTTATTGTGAATAACGGTAACGGTTATAATTTGAGGAGTAACGGTGTTGTTGGTAATGTTAGTGTAAATGGTAAAGAGAATGATAGTGTAAACAATGGAGCTTTTGATGTAAATAGGCTCCAGAAGAAGGTTAGGAATAAAGGCGGGAATGGAAAGAAAACAGACGCTGTTGTAACCAAGGCTGAGCCGAAAAAGGTAGTTAAGAAAAATAGGGTTTGGGATGACAAACCCGTTGAAACTAAGTTAGATTTTACGGATCATGTTGATGTTGATGGGGATGCTGATAAGGATAGGAAGGTTGATTATTTGGCTAAGGAACAAGGTGAGAGTATGATGGATAAAGATGAGATTTTTAGTAGTGACAGTGAGGATGAAGAGGATGATGATGATGAGGATGATGATGCTGGGAAGAAGAGCAAGCCTGATGCTAAAAAGAAGGGTTGGTTTTCATCTATGTTCCAGAGGTAAACTTGCTGAACTTGATTAATTAGTTTTTAGTTTTTTTTATTTTTTTATTTTTTTGTATATAAATTGAAAAGTTTGTGCTCTATTCAGATTTATGCTAAGTAGCTTACCTCATAGATTCCGATTGATGTTGTGTTGCTTGAATTAGTGAGAAGTGTTATATTTCCTTGAATTGGATTTTTTTGTCTGTTGCATTGTTTCTAATCGATGATTCCTTGACAATACTTTTATTGTTTTAATTCTAATGATGATTTACTGCAAGTGGTGGTAGCAATAGAAATTACACTCTAAACTTCCTTGGGTTGAAATCTTATTCATAGTTGTCCTTTGCTTTAAGACATATGTGCATTATTAGGATGTCAAGCTTATTTAACTTGTAATGATATTGGTATTCGTTTGAAAGTCAGGAAAGGTGTTGAGGTCAGGGGCATATATGGATATGACAAAGCATAAATGAATGAATAAATTAAATTGTTACTCTTGGTCATAAATGAATTTCCTCTTACATGTTGCTTTGATTGTTGTTTTTCTAAGATTTTGTGATGATGCCCTGTTTCCATTTTCCTTGTGACGGTATCGTCTTGGGTGAAATTTATTTTGTTGTTTGCAAATATCCTTGATCTGCTACTTTGATTGAATAATTTTACAACTTCACTTTGAAATTATTACTATTAGTTTATTTCAATTTTCAGCTTTTCATTGAAATGACTACTAATGAAGTTTATTTACATGCTTGTGCTCAGTATTGCTGGGAAGGCCAATTTGGAGAAGTCGGACTTGGAACCAGCTTTGAAAGCTCTGAAGGATAGACTCATGACCAAGAATGTGGTATGTATTTATCCTCAACATCATTAGATGTGGTGGCTTAAACGTCTAAATTTTGTTCTATTGTCTTCTTTTTGCTCTTCTTAAGCTATATAATATTTTTTACATTCTGTGTCACTTGTAGGCTGAGGAAATAGCTGAGAAGCTATGTGAATCAGTGGCTGCAAGTCTTGAAGGCAAAAAACTGGCTTCATTTACAAGGATATCTTCCACAGTGCAGGTTTGGTTTCTATCTTTTTCCCTATCGACATTTGATGCCGACCTTTTATTTATATACAATTTCACATTATTCATACTTATGCCGTGTTTTGAAAAATAATGCAGGCGGCAATGGAAGATGCACTGGTTCGTATTTTAACTCCTAGGCGTTCTATTGACATATTGAGGGATGTTCATGCTGCAAAAGAGCAAAGGAAACCATATGTTGTTGTATTTGTTGGAGTTAATGGAGTTGGAAAATCTACTAATCTTGCTAAGGTGAAGGACGTTCATATATTCTTCTTCTCTTTATGTAAAAATTCCGTACGTCGGGCTTGCTTTTTAACCTGAAGGAGATATTCCATTTTCTGTGTGATTATGCAGGTTGCTTACTGGCTTCAGCAACACAATGTTAATGTCATGATGGCTGCTTGTGATACATTTCGATCAGGAGCTGTTGAGCAGTTGCGGACTCATGCACGCAGACTTCAGGTTTACATTGATTTTAGTGCTTAAAGATTAATACATATATTGTTAGTAATATTAATAATAACCTTATAATTCCCCCTTTCAGATCCCTATATTTGAGAAGGGTTATGAAAAAGATCCTGCTGTTGTGGCAAAAGAAGCAATTCAGGAAGCTTCACGGAATGGTTCGGATGTTGTGCTAGTCGACACAGCTGGTCGTATGCAGGTAATAATTGCAGTTGTTGTTGAAGCAAAAGTTTATTGGTTTTATGGGGGTGTACAATATACCAAATGACTCAATACTATTGGTTATCTGTTAGGAACCCGGGATTAATACCGGTTTTATATTGACTAACGAAAGGAAATTGAGCCACGCTCTTATAGGAAAGCAACAGACCACCTGAGCCAAGGCTCCTTCAGAGAGGAATATCCTACTCCGCCTAACTGAATGAAACAGTTACTAACTTCTAGAATGAATGGATATTAAGTGGTCCAGCTACCCTCCCAATCTTTTATGCACTTATTCCTAACAGAATCCCCTTAAGAAATGGAACCTCTAATGCCACGTCATTAACCATCAGCTCTCTTAAGTCTTCTAGAGTATACCCTCCAAGGTTTGCGATGTGGGCCAGTATAGAGTATACCCTCCAAGGTTTGGGATGTGGGCCAGTATCCACAATCTGATCCTCTTCATGGCCCATTTCATTATTGGGCTCCAGAGCTCTATCACTGTTTCAGTTTCTAGGCCTTTGCTGTCAAGAGATAGTACTGAAAATGAACCTTTTATGTTTATTGGAATTGAGGAAAATTGTCATAGTTGAATGGTTTTGGTTATATTTAGAGACTATTGACGATGTTTATTTAAATGCATTTATATGTTCATCACTTCATCTTACATGTCACTGATGGTTTTCAGGATAATGAACCATTGATGAGAGCACTGTCAAAGCTGATCTACCTTAACAATCCTGACCTGGTCTTATTTGTTGGAGAAGCACTGGTTGGCAATGATGCAGTTGATCAGCTTTCAAAGTTCAACCAGGTTAGGTTCAATTTATTCAATAGTAGCTTTGTCCAACTACAATTGGGTCTTCGTCTCTCTTTTTCCCATAAGTCTGTTATTGAACCCATTTATTTTGTTGCAGAAACTGGCTGACCTTTCCACATCTCCTACACCCAGATTGATTGATGGGATCTTGCTCACAAAGTTCGACACTATTGATGATAAGGTATGCAAATACTGGAATTGCAACTTTGCAAGTAAATTTATGGCTAAGCATTTGGATATTCTTGATGAACATTTATTGGTTGGCTAGGACGGAGACTGTCCATTTAATATGGGTAATGATTATTGTTACGAATTAATAGCCACAAGAAAGCATCGAATGAATCATGTCCGCTGATTTTGTTTCCATCTCACCCATGTATTTCGCCCCCTTCCCTTTATTTTGTCTTTGCTAGTTTTTATATGTGTTATTCTTGCTTTTCTTGCCAATTTCATTCGCAAGAAATAGCACTGCTCATTTAATATAGATGAAATCGTTTTCTAATTATGTTTGATTTTGTCAGGTGGGAGCTGCACTTTCAATGGTTTACATATCTGGAGCTCCAGTCATGTTTGTGGGATGCGGACAGTCCTATACCGACCTCAAGAAACTCAACGTCAAGTCCATTGTGAAGACGCTCCTTAAATGA

Protein sequence

>MS.gene012546.t1

MLEQLLIFTRGGLILWSCNEIGNALKGSPIDTLIRSCLLEERSGAASYNYDAPGAAYSLKWTFHNDLGLVFVAVYQRILHLLYVDDLLAAVKREFSQVYDPTRTVYRDFDQIFKQLKIEAEARSEDLKKSNPVVVGGNRKQQVTWKGDGSDGKKNASAGGGGGGLKNDGDGKNGKKNSDNDRSVIVNNGNGYNLRSNGVVGNVSVNGKENDSVNNGAFDVNRLQKKVRNKGGNGKKTDAVVTKAEPKKVVKKNRVWDDKPVETKLDFTDHVDVDGDADKDRKVDYLAKEQGESMMDKDEIFSSDSEDEEDDDDEDDDAGKKSKPDAKKKGWFSSMFQSIAGKANLEKSDLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTVQAAMEDALVRILTPRRSIDILRDVHAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLQQHNVNVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLIYLNNPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTSPTPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLLK