Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012685.t1 | XP_027188200.1 | 47.5 | 305 | 145 | 3 | 34 | 337 | 26 | 316 | 2.50E-60 | 242.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012685.t1 | Q9FHE1 | 38.3 | 201 | 111 | 4 | 63 | 254 | 261 | 457 | 4.1e-27 | 123.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012685.t1 | A0A3Q7YDC8 | 47.5 | 305 | 145 | 3 | 34 | 337 | 26 | 316 | 1.8e-60 | 242.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene97346 | MS.gene012685 | PPI |
| MS.gene90825 | MS.gene012685 | PPI |
| MS.gene012685 | MS.gene029093 | PPI |
| MS.gene066439 | MS.gene012685 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012685.t1 | MTR_7g088160 | 43.769 | 329 | 146 | 3 | 34 | 337 | 75 | 389 | 4.36e-85 | 262 |
| MS.gene012685.t1 | MTR_4g063670 | 43.750 | 320 | 149 | 9 | 31 | 336 | 17 | 319 | 2.60e-63 | 204 |
| MS.gene012685.t1 | MTR_0867s0010 | 43.750 | 320 | 149 | 8 | 31 | 336 | 17 | 319 | 1.19e-59 | 194 |
| MS.gene012685.t1 | MTR_4g083510 | 39.763 | 337 | 169 | 10 | 16 | 336 | 2 | 320 | 1.49e-51 | 173 |
| MS.gene012685.t1 | MTR_7g107340 | 36.513 | 304 | 145 | 4 | 32 | 334 | 76 | 332 | 3.07e-50 | 171 |
| MS.gene012685.t1 | MTR_1g051185 | 47.682 | 151 | 69 | 4 | 93 | 241 | 45 | 187 | 5.94e-36 | 131 |
| MS.gene012685.t1 | MTR_3g069460 | 42.169 | 166 | 85 | 3 | 31 | 194 | 17 | 173 | 1.79e-35 | 127 |
| MS.gene012685.t1 | MTR_7g114170 | 33.993 | 303 | 124 | 8 | 32 | 334 | 61 | 287 | 2.41e-31 | 119 |
| MS.gene012685.t1 | MTR_6g081150 | 36.413 | 184 | 71 | 5 | 93 | 276 | 40 | 177 | 8.39e-25 | 99.4 |
| MS.gene012685.t1 | MTR_5g066280 | 24.503 | 302 | 200 | 5 | 36 | 335 | 55 | 330 | 3.05e-22 | 95.9 |
| MS.gene012685.t1 | MTR_3g067785 | 24.503 | 302 | 200 | 5 | 36 | 335 | 55 | 330 | 7.59e-22 | 94.7 |
| MS.gene012685.t1 | MTR_4g026120 | 24.503 | 302 | 200 | 5 | 36 | 335 | 55 | 330 | 8.22e-22 | 94.7 |
| MS.gene012685.t1 | MTR_4g036435 | 24.503 | 302 | 200 | 5 | 36 | 335 | 55 | 330 | 8.22e-22 | 94.7 |
| MS.gene012685.t1 | MTR_4g013220 | 24.503 | 302 | 200 | 5 | 36 | 335 | 55 | 330 | 8.30e-22 | 94.7 |
| MS.gene012685.t1 | MTR_2g022120 | 24.503 | 302 | 200 | 5 | 36 | 335 | 119 | 394 | 3.66e-21 | 93.6 |
| MS.gene012685.t1 | MTR_1g106885 | 24.503 | 302 | 200 | 5 | 36 | 335 | 116 | 391 | 4.33e-21 | 93.6 |
| MS.gene012685.t1 | MTR_5g077245 | 24.172 | 302 | 201 | 5 | 36 | 335 | 108 | 383 | 2.94e-20 | 90.9 |
| MS.gene012685.t1 | MTR_2g072860 | 28.659 | 164 | 112 | 2 | 34 | 197 | 29 | 187 | 6.37e-19 | 86.3 |
| MS.gene012685.t1 | MTR_7g461350 | 27.551 | 196 | 132 | 4 | 1 | 196 | 69 | 254 | 8.32e-19 | 86.7 |
| MS.gene012685.t1 | MTR_6g016670 | 27.551 | 196 | 132 | 4 | 1 | 196 | 69 | 254 | 8.32e-19 | 86.7 |
| MS.gene012685.t1 | MTR_3g464310 | 27.551 | 196 | 132 | 4 | 1 | 196 | 69 | 254 | 8.32e-19 | 86.7 |
| MS.gene012685.t1 | MTR_6g092533 | 27.329 | 161 | 114 | 1 | 36 | 196 | 119 | 276 | 1.00e-18 | 86.7 |
| MS.gene012685.t1 | MTR_3g464170 | 28.834 | 163 | 111 | 2 | 34 | 196 | 97 | 254 | 1.69e-18 | 85.9 |
| MS.gene012685.t1 | MTR_1g100375 | 28.834 | 163 | 111 | 2 | 34 | 196 | 97 | 254 | 1.69e-18 | 85.9 |
| MS.gene012685.t1 | MTR_6g051405 | 28.834 | 163 | 111 | 2 | 34 | 196 | 97 | 254 | 1.81e-18 | 85.9 |
| MS.gene012685.t1 | MTR_3g450670 | 28.221 | 163 | 112 | 2 | 34 | 196 | 93 | 250 | 4.19e-18 | 84.7 |
| MS.gene012685.t1 | MTR_1g471070 | 28.221 | 163 | 112 | 2 | 34 | 196 | 93 | 250 | 4.19e-18 | 84.7 |
| MS.gene012685.t1 | MTR_7g062380 | 23.977 | 171 | 112 | 1 | 75 | 245 | 26 | 178 | 3.99e-15 | 74.7 |
| MS.gene012685.t1 | MTR_6g453050 | 24.262 | 305 | 188 | 9 | 9 | 304 | 35 | 305 | 5.32e-14 | 72.0 |
| MS.gene012685.t1 | MTR_8g015740 | 37.931 | 116 | 56 | 3 | 2 | 105 | 19 | 130 | 3.09e-13 | 66.2 |
| MS.gene012685.t1 | MTR_4g046090 | 26.316 | 152 | 94 | 1 | 95 | 246 | 71 | 204 | 5.82e-13 | 68.6 |
| MS.gene012685.t1 | MTR_8g015750 | 33.645 | 214 | 94 | 8 | 141 | 336 | 3 | 186 | 6.79e-13 | 66.6 |
| MS.gene012685.t1 | MTR_7g083520 | 23.125 | 160 | 120 | 1 | 38 | 197 | 31 | 187 | 9.33e-13 | 68.2 |
| MS.gene012685.t1 | MTR_1g086750 | 27.966 | 118 | 85 | 0 | 75 | 192 | 26 | 143 | 1.49e-12 | 66.2 |
| MS.gene012685.t1 | MTR_4g046740 | 35.659 | 129 | 64 | 5 | 212 | 336 | 23 | 136 | 2.29e-12 | 63.9 |
| MS.gene012685.t1 | MTR_2g023560 | 63.636 | 44 | 16 | 0 | 74 | 117 | 62 | 105 | 3.93e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012685.t1 | AT5G41220 | 38.889 | 198 | 108 | 4 | 66 | 254 | 214 | 407 | 1.17e-33 | 130 |
| MS.gene012685.t1 | AT5G41220 | 38.889 | 198 | 108 | 4 | 66 | 254 | 206 | 399 | 1.30e-33 | 130 |
| MS.gene012685.t1 | AT5G41220 | 38.889 | 198 | 108 | 4 | 66 | 254 | 264 | 457 | 1.55e-33 | 130 |
| MS.gene012685.t1 | AT5G41240 | 37.255 | 204 | 114 | 4 | 66 | 259 | 264 | 463 | 1.69e-32 | 127 |
| MS.gene012685.t1 | AT3G47680 | 32.558 | 215 | 117 | 8 | 38 | 243 | 14 | 209 | 7.56e-24 | 99.8 |
| MS.gene012685.t1 | AT1G66235 | 25.510 | 196 | 119 | 5 | 75 | 252 | 7 | 193 | 9.10e-13 | 68.2 |
Find 59 sgRNAs with CRISPR-Local
Find 69 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTGGATTCTTCAGTAAAT+TGG | 0.187266 | 8.1:+1385664 | None:intergenic |
| GTAAATTGGCATGACCATTT+AGG | 0.268868 | 8.1:+1385678 | None:intergenic |
| TAGAAATATTTAACCATGAT+TGG | 0.280172 | 8.1:+1385997 | None:intergenic |
| ATCATGGTTAAATATTTCTA+AGG | 0.308295 | 8.1:-1385994 | MS.gene012685:CDS |
| TACTAAAAGATGAACCTAAA+TGG | 0.349471 | 8.1:-1385692 | MS.gene012685:CDS |
| TTCACTTGAGTTGTATTGTC+CGG | 0.371973 | 8.1:+1385569 | None:intergenic |
| AGAACAAAGAATTCTGCTTC+AGG | 0.392497 | 8.1:-1385639 | MS.gene012685:CDS |
| AGAATTCTTTGTTCTCTTGT+TGG | 0.394331 | 8.1:+1385647 | None:intergenic |
| GTTAGATCCACATGAACAAT+AGG | 0.411169 | 8.1:+1385477 | None:intergenic |
| TGGTCAAATGTGGGGATAGA+AGG | 0.412319 | 8.1:+1386233 | None:intergenic |
| TGAGCTTCACTATCTCTTGA+TGG | 0.426003 | 8.1:-1385340 | MS.gene012685:CDS |
| TCACTTGAGTTGTATTGTCC+GGG | 0.435029 | 8.1:+1385570 | None:intergenic |
| TCACCGCTTGTAGGCGTGTC+CGG | 0.437280 | 8.1:+1385594 | None:intergenic |
| AGTAGAGTGGTTCGTCCGAT+TGG | 0.444657 | 8.1:-1385546 | MS.gene012685:CDS |
| TGTCCGGGGTCACCGCTTGT+AGG | 0.454198 | 8.1:+1385585 | None:intergenic |
| CAATACTCATTGAAGTTCCT+TGG | 0.455671 | 8.1:+1386213 | None:intergenic |
| ATCTCTTGATGGATACATCT+AGG | 0.458045 | 8.1:-1385329 | MS.gene012685:CDS |
| ATACACTTCTTATCCAATCA+TGG | 0.460631 | 8.1:-1386010 | MS.gene012685:CDS |
| AGGAGAAAATATATAGAGAA+AGG | 0.462201 | 8.1:-1386049 | MS.gene012685:CDS |
| TTTGAAGAAATCTGAGCTGT+TGG | 0.469253 | 8.1:+1386086 | None:intergenic |
| ATGGTCGAAGGTGAACTTGA+TGG | 0.477920 | 8.1:-1385856 | MS.gene012685:CDS |
| CTACACATCCTCTTCTAATC+CGG | 0.479246 | 8.1:-1385613 | MS.gene012685:CDS |
| ATTTCTAAGGATCCAATTGT+GGG | 0.492615 | 8.1:-1385981 | MS.gene012685:CDS |
| GTAGAGTGGTTCGTCCGATT+GGG | 0.497308 | 8.1:-1385545 | MS.gene012685:CDS |
| GAAGGTGAGGATTGAAACAT+AGG | 0.501482 | 8.1:+1386251 | None:intergenic |
| TGAAGTTCCTTGGTCAAATG+TGG | 0.502589 | 8.1:+1386223 | None:intergenic |
| TTGTTCATGTGGATCTAACT+AGG | 0.507003 | 8.1:-1385473 | MS.gene012685:CDS |
| GACAAAAGCAGCTAAAAGAA+AGG | 0.508350 | 8.1:-1385523 | MS.gene012685:CDS |
| TATTTCTAAGGATCCAATTG+TGG | 0.512026 | 8.1:-1385982 | MS.gene012685:CDS |
| CCAACTTGAGAGGAAAATGA+TGG | 0.520919 | 8.1:+1386143 | None:intergenic |
| GCATGAAGGTAACAAGTTGA+AGG | 0.526954 | 8.1:-1385394 | MS.gene012685:CDS |
| CGACATTATGCAAGATGCAT+TGG | 0.532468 | 8.1:-1385769 | MS.gene012685:CDS |
| ACAAAAGCAGCTAAAAGAAA+GGG | 0.543467 | 8.1:-1385522 | MS.gene012685:CDS |
| GAAGTTCCTTGGTCAAATGT+GGG | 0.548198 | 8.1:+1386224 | None:intergenic |
| GCCTATTCAAGAAAGAAAAG+TGG | 0.554764 | 8.1:-1385804 | MS.gene012685:CDS |
| AGTTGGGTTAGATAATATTG+AGG | 0.557841 | 8.1:-1386126 | MS.gene012685:CDS |
| TGAATCAAATTAAATGTCGA+TGG | 0.569722 | 8.1:-1385875 | MS.gene012685:CDS |
| ACGCCTACAAGCGGTGACCC+CGG | 0.571208 | 8.1:-1385588 | MS.gene012685:CDS |
| TCATGTGGATCTAACTAGGA+TGG | 0.578161 | 8.1:-1385469 | MS.gene012685:CDS |
| TGAAACACCTATTGTTCATG+TGG | 0.578577 | 8.1:-1385484 | MS.gene012685:CDS |
| AATTAAATGTCGATGGTCGA+AGG | 0.587022 | 8.1:-1385868 | MS.gene012685:CDS |
| CGGATTAGAAGAGGATGTGT+AGG | 0.590924 | 8.1:+1385614 | None:intergenic |
| ATTATCTAACCCAACTTGAG+AGG | 0.596041 | 8.1:+1386133 | None:intergenic |
| TTCTAAGGATCCAATTGTGG+GGG | 0.599880 | 8.1:-1385979 | MS.gene012685:CDS |
| AAATGTGGGGATAGAAGGTG+AGG | 0.601662 | 8.1:+1386238 | None:intergenic |
| CACTTGAGTTGTATTGTCCG+GGG | 0.607801 | 8.1:+1385571 | None:intergenic |
| ATTGCACGTGGTGTGCATGA+AGG | 0.607967 | 8.1:-1385408 | MS.gene012685:CDS |
| GATAATTATAATCAATATCG+TGG | 0.614936 | 8.1:-1385918 | MS.gene012685:CDS |
| AAGTTCCTTGGTCAAATGTG+GGG | 0.615231 | 8.1:+1386225 | None:intergenic |
| AGGCGTGTCCGGATTAGAAG+AGG | 0.638071 | 8.1:+1385605 | None:intergenic |
| TTTCTAAGGATCCAATTGTG+GGG | 0.639337 | 8.1:-1385980 | MS.gene012685:CDS |
| CAACTCAAGTGAAAGTAGAG+TGG | 0.640911 | 8.1:-1385559 | MS.gene012685:CDS |
| AATCCGGACACGCCTACAAG+CGG | 0.654384 | 8.1:-1385597 | MS.gene012685:CDS |
| TCTATCCCCACATTTGACCA+AGG | 0.657869 | 8.1:-1386230 | MS.gene012685:CDS |
| ATATAGAGAAAGGTTTACCA+CGG | 0.696539 | 8.1:-1386039 | MS.gene012685:CDS |
| GCTTTAGAAGATATTGCACG+TGG | 0.699659 | 8.1:-1385420 | MS.gene012685:CDS |
| GGATACATCTAGGATGACAG+AGG | 0.702928 | 8.1:-1385319 | MS.gene012685:CDS |
| AAGAAGTGTATCTTCCTCCG+TGG | 0.715732 | 8.1:+1386022 | None:intergenic |
| TAGAGAAAGGTTTACCACGG+AGG | 0.724762 | 8.1:-1386036 | MS.gene012685:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATAATTATAATCAATATCG+TGG | - | chr8.1:1385587-1385606 | MS.gene012685:CDS | 20.0% |
| !! | TAGAAATATTTAACCATGAT+TGG | + | chr8.1:1385511-1385530 | None:intergenic | 20.0% |
| !! | TTCAAAAGAAACAAAAACAA+AGG | - | chr8.1:1385436-1385455 | MS.gene012685:CDS | 20.0% |
| !!! | ATCATGGTTAAATATTTCTA+AGG | - | chr8.1:1385511-1385530 | MS.gene012685:CDS | 20.0% |
| ! | AGGAGAAAATATATAGAGAA+AGG | - | chr8.1:1385456-1385475 | MS.gene012685:CDS | 25.0% |
| ! | GGAAAAAGAATTGCAAATTA+AGG | - | chr8.1:1386132-1386151 | MS.gene012685:CDS | 25.0% |
| ! | TACTAAAAGATGAACCTAAA+TGG | - | chr8.1:1385813-1385832 | MS.gene012685:CDS | 25.0% |
| ! | TGAATCAAATTAAATGTCGA+TGG | - | chr8.1:1385630-1385649 | MS.gene012685:CDS | 25.0% |
| ACAAAAGCAGCTAAAAGAAA+GGG | - | chr8.1:1385983-1386002 | MS.gene012685:CDS | 30.0% | |
| AGAATTCTTTGTTCTCTTGT+TGG | + | chr8.1:1385861-1385880 | None:intergenic | 30.0% | |
| ATACACTTCTTATCCAATCA+TGG | - | chr8.1:1385495-1385514 | MS.gene012685:CDS | 30.0% | |
| ATATAGAGAAAGGTTTACCA+CGG | - | chr8.1:1385466-1385485 | MS.gene012685:CDS | 30.0% | |
| TGTTGGATTCTTCAGTAAAT+TGG | + | chr8.1:1385844-1385863 | None:intergenic | 30.0% | |
| ! | AGTTGGGTTAGATAATATTG+AGG | - | chr8.1:1385379-1385398 | MS.gene012685:CDS | 30.0% |
| ! | ATTTCTAAGGATCCAATTGT+GGG | - | chr8.1:1385524-1385543 | MS.gene012685:CDS | 30.0% |
| ! | TATTTCTAAGGATCCAATTG+TGG | - | chr8.1:1385523-1385542 | MS.gene012685:CDS | 30.0% |
| ! | TCTTTTAGTAATTTCCATGC+TGG | + | chr8.1:1385803-1385822 | None:intergenic | 30.0% |
| !! | ACCACTTTTCTTTCTTGAAT+AGG | + | chr8.1:1385705-1385724 | None:intergenic | 30.0% |
| AATTAAATGTCGATGGTCGA+AGG | - | chr8.1:1385637-1385656 | MS.gene012685:CDS | 35.0% | |
| AGAACAAAGAATTCTGCTTC+AGG | - | chr8.1:1385866-1385885 | MS.gene012685:CDS | 35.0% | |
| ATTATCTAACCCAACTTGAG+AGG | + | chr8.1:1385375-1385394 | None:intergenic | 35.0% | |
| CAATACTCATTGAAGTTCCT+TGG | + | chr8.1:1385295-1385314 | None:intergenic | 35.0% | |
| GACAAAAGCAGCTAAAAGAA+AGG | - | chr8.1:1385982-1386001 | MS.gene012685:CDS | 35.0% | |
| GCCTATTCAAGAAAGAAAAG+TGG | - | chr8.1:1385701-1385720 | MS.gene012685:CDS | 35.0% | |
| GTAAATTGGCATGACCATTT+AGG | + | chr8.1:1385830-1385849 | None:intergenic | 35.0% | |
| GTTAGATCCACATGAACAAT+AGG | + | chr8.1:1386031-1386050 | None:intergenic | 35.0% | |
| TGAAACACCTATTGTTCATG+TGG | - | chr8.1:1386021-1386040 | MS.gene012685:CDS | 35.0% | |
| TTGTTCATGTGGATCTAACT+AGG | - | chr8.1:1386032-1386051 | MS.gene012685:CDS | 35.0% | |
| TTTGAAGAAATCTGAGCTGT+TGG | + | chr8.1:1385422-1385441 | None:intergenic | 35.0% | |
| ! | ACCAAAGAGCAAGTTCTTTT+TGG | - | chr8.1:1385552-1385571 | MS.gene012685:CDS | 35.0% |
| ! | ATCTCTTGATGGATACATCT+AGG | - | chr8.1:1386176-1386195 | MS.gene012685:CDS | 35.0% |
| ! | CATCATTTTCCTCTCAAGTT+GGG | - | chr8.1:1385363-1385382 | MS.gene012685:CDS | 35.0% |
| ! | TCCAAAAAGAACTTGCTCTT+TGG | + | chr8.1:1385556-1385575 | None:intergenic | 35.0% |
| ! | TTCACTTGAGTTGTATTGTC+CGG | + | chr8.1:1385939-1385958 | None:intergenic | 35.0% |
| ! | TTTCTAAGGATCCAATTGTG+GGG | - | chr8.1:1385525-1385544 | MS.gene012685:CDS | 35.0% |
| AAGTTCCTTGGTCAAATGTG+GGG | + | chr8.1:1385283-1385302 | None:intergenic | 40.0% | |
| CAACTCAAGTGAAAGTAGAG+TGG | - | chr8.1:1385946-1385965 | MS.gene012685:CDS | 40.0% | |
| CCAACTTGAGAGGAAAATGA+TGG | + | chr8.1:1385365-1385384 | None:intergenic | 40.0% | |
| CGACATTATGCAAGATGCAT+TGG | - | chr8.1:1385736-1385755 | MS.gene012685:CDS | 40.0% | |
| CTACACATCCTCTTCTAATC+CGG | - | chr8.1:1385892-1385911 | MS.gene012685:CDS | 40.0% | |
| GAAGTTCCTTGGTCAAATGT+GGG | + | chr8.1:1385284-1385303 | None:intergenic | 40.0% | |
| TCATGTGGATCTAACTAGGA+TGG | - | chr8.1:1386036-1386055 | MS.gene012685:CDS | 40.0% | |
| TGAAGTTCCTTGGTCAAATG+TGG | + | chr8.1:1385285-1385304 | None:intergenic | 40.0% | |
| TGAGCTTCACTATCTCTTGA+TGG | - | chr8.1:1386165-1386184 | MS.gene012685:CDS | 40.0% | |
| ! | CCATCATTTTCCTCTCAAGT+TGG | - | chr8.1:1385362-1385381 | MS.gene012685:CDS | 40.0% |
| ! | GCATGAAGGTAACAAGTTGA+AGG | - | chr8.1:1386111-1386130 | MS.gene012685:CDS | 40.0% |
| ! | GTTTTATGTTAGTGCCAGCA+TGG | - | chr8.1:1385786-1385805 | MS.gene012685:CDS | 40.0% |
| ! | TCACTTGAGTTGTATTGTCC+GGG | + | chr8.1:1385938-1385957 | None:intergenic | 40.0% |
| ! | TTCTAAGGATCCAATTGTGG+GGG | - | chr8.1:1385526-1385545 | MS.gene012685:CDS | 40.0% |
| !! | GCTTTAGAAGATATTGCACG+TGG | - | chr8.1:1386085-1386104 | MS.gene012685:CDS | 40.0% |
| !!! | TTAGCTGCTTTTGTCCCAAT+CGG | + | chr8.1:1385977-1385996 | None:intergenic | 40.0% |
| AAATGTGGGGATAGAAGGTG+AGG | + | chr8.1:1385270-1385289 | None:intergenic | 45.0% | |
| ATGGTCGAAGGTGAACTTGA+TGG | - | chr8.1:1385649-1385668 | MS.gene012685:CDS | 45.0% | |
| TAGAGAAAGGTTTACCACGG+AGG | - | chr8.1:1385469-1385488 | MS.gene012685:CDS | 45.0% | |
| TCTATCCCCACATTTGACCA+AGG | - | chr8.1:1385275-1385294 | MS.gene012685:CDS | 45.0% | |
| TGGTCAAATGTGGGGATAGA+AGG | + | chr8.1:1385275-1385294 | None:intergenic | 45.0% | |
| ! | AAGAAGTGTATCTTCCTCCG+TGG | + | chr8.1:1385486-1385505 | None:intergenic | 45.0% |
| ! | CACTTGAGTTGTATTGTCCG+GGG | + | chr8.1:1385937-1385956 | None:intergenic | 45.0% |
| ! | CGGATTAGAAGAGGATGTGT+AGG | + | chr8.1:1385894-1385913 | None:intergenic | 45.0% |
| ! | GGATACATCTAGGATGACAG+AGG | - | chr8.1:1386186-1386205 | MS.gene012685:CDS | 45.0% |
| AGTAGAGTGGTTCGTCCGAT+TGG | - | chr8.1:1385959-1385978 | MS.gene012685:CDS | 50.0% | |
| ATTGCACGTGGTGTGCATGA+AGG | - | chr8.1:1386097-1386116 | MS.gene012685:CDS | 50.0% | |
| GTAGAGTGGTTCGTCCGATT+GGG | - | chr8.1:1385960-1385979 | MS.gene012685:CDS | 50.0% | |
| !! | CTTTGGTTTGCCCCCACAAT+TGG | + | chr8.1:1385539-1385558 | None:intergenic | 50.0% |
| AATCCGGACACGCCTACAAG+CGG | - | chr8.1:1385908-1385927 | MS.gene012685:CDS | 55.0% | |
| ! | AGGCGTGTCCGGATTAGAAG+AGG | + | chr8.1:1385903-1385922 | None:intergenic | 55.0% |
| TCACCGCTTGTAGGCGTGTC+CGG | + | chr8.1:1385914-1385933 | None:intergenic | 60.0% | |
| ACGCCTACAAGCGGTGACCC+CGG | - | chr8.1:1385917-1385936 | MS.gene012685:CDS | 65.0% | |
| TGTCCGGGGTCACCGCTTGT+AGG | + | chr8.1:1385923-1385942 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 1385257 | 1386270 | 1385257 | ID=MS.gene012685 |
| chr8.1 | mRNA | 1385257 | 1386270 | 1385257 | ID=MS.gene012685.t1;Parent=MS.gene012685 |
| chr8.1 | exon | 1385257 | 1386270 | 1385257 | ID=MS.gene012685.t1.exon1;Parent=MS.gene012685.t1 |
| chr8.1 | CDS | 1385257 | 1386270 | 1385257 | ID=cds.MS.gene012685.t1;Parent=MS.gene012685.t1 |
| Gene Sequence |
| Protein sequence |
