Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012763.t1 | XP_013458674.1 | 99.5 | 605 | 3 | 0 | 1 | 605 | 1 | 605 | 0.00E+00 | 1185.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012763.t1 | Q9FIK1 | 61.7 | 519 | 193 | 4 | 1 | 516 | 1 | 516 | 1.0e-185 | 651.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012763.t1 | G7ZZV4 | 99.5 | 605 | 3 | 0 | 1 | 605 | 1 | 605 | 0.0e+00 | 1185.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene012763 | MS.gene86230 | PPI |
| MS.gene012763 | MS.gene29159 | PPI |
| MS.gene012763 | MS.gene027737 | PPI |
| MS.gene44279 | MS.gene012763 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012763.t1 | MTR_4g134210 | 99.504 | 605 | 3 | 0 | 1 | 605 | 1 | 605 | 0.0 | 1245 |
| MS.gene012763.t1 | MTR_2g027410 | 67.276 | 602 | 164 | 6 | 1 | 600 | 1 | 571 | 0.0 | 811 |
| MS.gene012763.t1 | MTR_2g027410 | 66.792 | 530 | 143 | 6 | 73 | 600 | 1 | 499 | 0.0 | 705 |
| MS.gene012763.t1 | MTR_5g032780 | 48.467 | 522 | 223 | 6 | 1 | 477 | 1 | 521 | 4.69e-162 | 478 |
| MS.gene012763.t1 | MTR_8g069330 | 46.535 | 505 | 223 | 6 | 1 | 477 | 1 | 486 | 1.90e-144 | 431 |
| MS.gene012763.t1 | MTR_5g015790 | 42.771 | 498 | 249 | 8 | 1 | 476 | 1 | 484 | 3.14e-133 | 404 |
| MS.gene012763.t1 | MTR_1g014070 | 41.212 | 495 | 260 | 7 | 1 | 473 | 1 | 486 | 5.88e-131 | 397 |
| MS.gene012763.t1 | MTR_1g106430 | 39.279 | 499 | 264 | 7 | 1 | 473 | 1 | 486 | 1.40e-121 | 373 |
| MS.gene012763.t1 | MTR_4g093850 | 37.266 | 534 | 277 | 9 | 5 | 484 | 23 | 552 | 1.37e-112 | 351 |
| MS.gene012763.t1 | MTR_2g009340 | 36.535 | 531 | 280 | 7 | 5 | 479 | 23 | 552 | 8.45e-108 | 339 |
| MS.gene012763.t1 | MTR_2g018750 | 35.341 | 498 | 295 | 6 | 1 | 473 | 1 | 496 | 7.80e-98 | 311 |
| MS.gene012763.t1 | MTR_5g016060 | 35.269 | 465 | 283 | 7 | 22 | 475 | 36 | 493 | 3.61e-93 | 300 |
| MS.gene012763.t1 | MTR_4g022330 | 35.974 | 467 | 275 | 6 | 25 | 475 | 33 | 491 | 3.52e-91 | 294 |
| MS.gene012763.t1 | MTR_4g093850 | 35.565 | 478 | 252 | 8 | 5 | 430 | 23 | 496 | 1.14e-90 | 290 |
| MS.gene012763.t1 | MTR_4g095430 | 36.364 | 462 | 279 | 7 | 23 | 475 | 10 | 465 | 2.56e-90 | 291 |
| MS.gene012763.t1 | MTR_8g090220 | 34.440 | 482 | 268 | 8 | 19 | 471 | 45 | 507 | 2.20e-89 | 286 |
| MS.gene012763.t1 | MTR_8g090220 | 33.333 | 537 | 299 | 10 | 19 | 526 | 45 | 551 | 4.02e-89 | 289 |
| MS.gene012763.t1 | MTR_2g084595 | 35.504 | 476 | 279 | 9 | 24 | 473 | 21 | 494 | 1.73e-87 | 285 |
| MS.gene012763.t1 | MTR_8g078900 | 33.068 | 502 | 279 | 8 | 23 | 473 | 17 | 512 | 6.48e-87 | 284 |
| MS.gene012763.t1 | MTR_1g064360 | 32.460 | 496 | 293 | 9 | 1 | 473 | 1 | 477 | 1.35e-86 | 280 |
| MS.gene012763.t1 | MTR_1g094850 | 33.068 | 502 | 301 | 7 | 1 | 475 | 1 | 494 | 2.56e-86 | 281 |
| MS.gene012763.t1 | MTR_3g062540 | 32.391 | 460 | 288 | 5 | 21 | 475 | 19 | 460 | 1.49e-84 | 275 |
| MS.gene012763.t1 | MTR_2g048390 | 35.088 | 456 | 262 | 10 | 1 | 425 | 1 | 453 | 2.50e-81 | 263 |
| MS.gene012763.t1 | MTR_8g078900 | 32.787 | 488 | 271 | 8 | 37 | 473 | 1 | 482 | 6.99e-81 | 267 |
| MS.gene012763.t1 | MTR_7g108290 | 33.155 | 561 | 309 | 13 | 17 | 532 | 27 | 566 | 3.56e-79 | 264 |
| MS.gene012763.t1 | MTR_8g078900 | 34.096 | 437 | 251 | 7 | 68 | 473 | 42 | 472 | 3.34e-78 | 260 |
| MS.gene012763.t1 | MTR_5g075640 | 31.723 | 476 | 295 | 4 | 22 | 484 | 21 | 479 | 1.18e-77 | 257 |
| MS.gene012763.t1 | MTR_1g088885 | 32.014 | 556 | 319 | 12 | 17 | 532 | 27 | 563 | 1.22e-77 | 258 |
| MS.gene012763.t1 | MTR_3g062540 | 32.644 | 435 | 270 | 5 | 46 | 475 | 2 | 418 | 4.36e-76 | 251 |
| MS.gene012763.t1 | MTR_7g073980 | 32.632 | 475 | 297 | 10 | 14 | 473 | 21 | 487 | 2.78e-74 | 250 |
| MS.gene012763.t1 | MTR_1g082690 | 31.347 | 453 | 271 | 9 | 28 | 473 | 60 | 479 | 3.32e-72 | 242 |
| MS.gene012763.t1 | MTR_2g084595 | 34.112 | 428 | 254 | 9 | 24 | 425 | 21 | 446 | 2.52e-70 | 234 |
| MS.gene012763.t1 | MTR_5g075640 | 30.752 | 452 | 283 | 4 | 46 | 484 | 2 | 436 | 9.05e-68 | 230 |
| MS.gene012763.t1 | MTR_8g078900 | 30.396 | 454 | 259 | 8 | 23 | 425 | 17 | 464 | 4.17e-64 | 218 |
| MS.gene012763.t1 | MTR_5g016060 | 32.898 | 383 | 239 | 7 | 104 | 475 | 4 | 379 | 1.16e-62 | 216 |
| MS.gene012763.t1 | MTR_8g078900 | 31.105 | 389 | 231 | 7 | 68 | 425 | 42 | 424 | 6.33e-56 | 195 |
| MS.gene012763.t1 | MTR_4g011530 | 36.207 | 290 | 168 | 5 | 201 | 485 | 46 | 323 | 8.44e-50 | 179 |
| MS.gene012763.t1 | MTR_2g102730 | 36.364 | 297 | 176 | 4 | 183 | 475 | 6 | 293 | 2.81e-49 | 177 |
| MS.gene012763.t1 | MTR_4g045767 | 30.394 | 431 | 257 | 14 | 60 | 475 | 40 | 442 | 1.02e-42 | 161 |
| MS.gene012763.t1 | MTR_4g074190 | 25.971 | 489 | 302 | 12 | 29 | 480 | 6 | 471 | 5.04e-37 | 145 |
| MS.gene012763.t1 | MTR_4g080720 | 87.143 | 70 | 9 | 0 | 1 | 70 | 1 | 70 | 4.37e-36 | 130 |
| MS.gene012763.t1 | MTR_4g074190 | 26.009 | 446 | 274 | 10 | 68 | 480 | 3 | 425 | 2.05e-35 | 140 |
| MS.gene012763.t1 | MTR_1g035720 | 26.087 | 483 | 290 | 12 | 29 | 474 | 6 | 458 | 1.30e-32 | 132 |
| MS.gene012763.t1 | MTR_4g074190 | 25.977 | 435 | 262 | 12 | 29 | 426 | 6 | 417 | 2.44e-31 | 127 |
| MS.gene012763.t1 | MTR_2g010890 | 25.798 | 376 | 240 | 12 | 100 | 461 | 8 | 358 | 1.39e-25 | 110 |
| MS.gene012763.t1 | MTR_6g046500 | 87.755 | 49 | 6 | 0 | 22 | 70 | 1 | 49 | 1.97e-22 | 90.9 |
| MS.gene012763.t1 | MTR_1g105870 | 31.579 | 190 | 122 | 2 | 33 | 220 | 38 | 221 | 4.65e-22 | 96.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene012763.t1 | AT5G47800 | 64.669 | 484 | 168 | 2 | 1 | 482 | 1 | 483 | 0.0 | 675 |
| MS.gene012763.t1 | AT5G47800 | 64.669 | 484 | 168 | 2 | 1 | 482 | 1 | 483 | 0.0 | 675 |
| MS.gene012763.t1 | AT5G47800 | 64.669 | 484 | 168 | 2 | 1 | 482 | 1 | 483 | 0.0 | 675 |
| MS.gene012763.t1 | AT5G47800 | 64.669 | 484 | 168 | 2 | 1 | 482 | 114 | 596 | 0.0 | 672 |
| MS.gene012763.t1 | AT1G67900 | 45.087 | 519 | 245 | 5 | 1 | 482 | 1 | 516 | 6.07e-151 | 449 |
| MS.gene012763.t1 | AT1G67900 | 45.087 | 519 | 245 | 5 | 1 | 482 | 1 | 516 | 6.07e-151 | 449 |
| MS.gene012763.t1 | AT1G67900 | 45.087 | 519 | 245 | 5 | 1 | 482 | 1 | 516 | 6.07e-151 | 449 |
| MS.gene012763.t1 | AT1G67900 | 45.087 | 519 | 245 | 5 | 1 | 482 | 1 | 516 | 6.07e-151 | 449 |
| MS.gene012763.t1 | AT1G67900 | 45.087 | 519 | 245 | 5 | 1 | 482 | 1 | 516 | 6.07e-151 | 449 |
| MS.gene012763.t1 | AT1G67900 | 45.087 | 519 | 245 | 5 | 1 | 482 | 1 | 516 | 6.07e-151 | 449 |
| MS.gene012763.t1 | AT4G31820 | 39.139 | 534 | 276 | 10 | 1 | 511 | 1 | 508 | 3.21e-126 | 384 |
| MS.gene012763.t1 | AT3G26490 | 38.561 | 542 | 267 | 12 | 1 | 493 | 1 | 525 | 5.68e-125 | 381 |
| MS.gene012763.t1 | AT3G26490 | 38.561 | 542 | 267 | 12 | 1 | 493 | 1 | 525 | 5.68e-125 | 381 |
| MS.gene012763.t1 | AT3G26490 | 38.561 | 542 | 267 | 12 | 1 | 493 | 1 | 525 | 5.68e-125 | 381 |
| MS.gene012763.t1 | AT2G14820 | 38.690 | 504 | 278 | 6 | 1 | 482 | 1 | 495 | 6.75e-124 | 380 |
| MS.gene012763.t1 | AT2G14820 | 38.690 | 504 | 278 | 6 | 1 | 482 | 1 | 495 | 6.75e-124 | 380 |
| MS.gene012763.t1 | AT5G67440 | 40.496 | 484 | 275 | 6 | 1 | 477 | 1 | 478 | 2.71e-121 | 371 |
| MS.gene012763.t1 | AT5G67440 | 40.496 | 484 | 275 | 6 | 1 | 477 | 1 | 478 | 2.71e-121 | 371 |
| MS.gene012763.t1 | AT4G37590 | 39.736 | 531 | 273 | 12 | 1 | 513 | 1 | 502 | 3.07e-121 | 371 |
| MS.gene012763.t1 | AT2G23050 | 40.568 | 493 | 248 | 9 | 1 | 483 | 1 | 458 | 7.38e-120 | 364 |
| MS.gene012763.t1 | AT4G31820 | 38.462 | 481 | 248 | 9 | 53 | 511 | 1 | 455 | 4.20e-109 | 338 |
| MS.gene012763.t1 | AT5G67440 | 39.955 | 443 | 254 | 5 | 41 | 477 | 5 | 441 | 4.16e-106 | 330 |
| MS.gene012763.t1 | AT3G26490 | 37.759 | 482 | 233 | 12 | 1 | 435 | 1 | 462 | 1.03e-101 | 318 |
| MS.gene012763.t1 | AT5G64330 | 32.483 | 588 | 283 | 9 | 7 | 484 | 33 | 616 | 5.56e-95 | 305 |
| MS.gene012763.t1 | AT5G64330 | 32.483 | 588 | 283 | 9 | 7 | 484 | 33 | 616 | 1.19e-94 | 306 |
| MS.gene012763.t1 | AT1G30440 | 34.047 | 514 | 290 | 8 | 1 | 473 | 1 | 506 | 1.82e-91 | 296 |
| MS.gene012763.t1 | AT5G03250 | 33.002 | 503 | 304 | 7 | 1 | 473 | 1 | 500 | 3.88e-90 | 290 |
| MS.gene012763.t1 | AT5G67385 | 34.542 | 469 | 291 | 8 | 23 | 482 | 22 | 483 | 4.20e-90 | 291 |
| MS.gene012763.t1 | AT5G13600 | 34.337 | 498 | 295 | 9 | 1 | 473 | 1 | 491 | 4.94e-86 | 280 |
| MS.gene012763.t1 | AT5G66560 | 33.398 | 515 | 277 | 8 | 23 | 473 | 16 | 528 | 3.73e-85 | 280 |
| MS.gene012763.t1 | AT5G64330 | 31.957 | 557 | 265 | 9 | 38 | 484 | 5 | 557 | 4.42e-85 | 278 |
| MS.gene012763.t1 | AT5G48800 | 34.542 | 469 | 265 | 7 | 25 | 475 | 40 | 484 | 7.61e-84 | 275 |
| MS.gene012763.t1 | AT2G23050 | 39.523 | 377 | 189 | 7 | 111 | 483 | 1 | 342 | 3.62e-83 | 265 |
| MS.gene012763.t1 | AT5G67385 | 34.607 | 445 | 275 | 8 | 47 | 482 | 1 | 438 | 1.04e-82 | 270 |
| MS.gene012763.t1 | AT5G67385 | 34.607 | 445 | 275 | 8 | 47 | 482 | 1 | 438 | 1.04e-82 | 270 |
| MS.gene012763.t1 | AT5G67385 | 34.607 | 445 | 275 | 8 | 47 | 482 | 1 | 438 | 1.04e-82 | 270 |
| MS.gene012763.t1 | AT5G67385 | 34.607 | 445 | 275 | 8 | 47 | 482 | 1 | 438 | 1.04e-82 | 270 |
| MS.gene012763.t1 | AT5G10250 | 29.268 | 574 | 337 | 9 | 5 | 540 | 29 | 571 | 2.58e-82 | 271 |
| MS.gene012763.t1 | AT5G66560 | 35.915 | 426 | 251 | 6 | 68 | 473 | 66 | 489 | 9.68e-82 | 270 |
| MS.gene012763.t1 | AT5G66560 | 35.915 | 426 | 251 | 6 | 68 | 473 | 76 | 499 | 1.58e-81 | 269 |
| MS.gene012763.t1 | AT5G10250 | 29.590 | 561 | 331 | 9 | 8 | 540 | 32 | 556 | 6.76e-81 | 266 |
| MS.gene012763.t1 | AT2G30520 | 32.112 | 464 | 287 | 6 | 21 | 475 | 25 | 469 | 1.83e-80 | 265 |
| MS.gene012763.t1 | AT3G44820 | 31.800 | 500 | 300 | 9 | 13 | 473 | 10 | 507 | 1.28e-76 | 256 |
| MS.gene012763.t1 | AT1G03010 | 31.588 | 554 | 320 | 10 | 24 | 532 | 7 | 546 | 8.91e-76 | 253 |
| MS.gene012763.t1 | AT1G03010 | 31.393 | 567 | 328 | 11 | 11 | 532 | 22 | 572 | 1.05e-75 | 253 |
| MS.gene012763.t1 | AT3G50840 | 34.755 | 469 | 278 | 9 | 16 | 473 | 6 | 457 | 1.07e-75 | 252 |
| MS.gene012763.t1 | AT1G03010 | 31.588 | 554 | 320 | 10 | 24 | 532 | 34 | 573 | 1.37e-75 | 253 |
| MS.gene012763.t1 | AT3G49970 | 33.333 | 426 | 248 | 8 | 34 | 458 | 2 | 392 | 6.23e-74 | 246 |
| MS.gene012763.t1 | AT3G49970 | 33.333 | 426 | 248 | 8 | 34 | 458 | 2 | 392 | 6.23e-74 | 246 |
| MS.gene012763.t1 | AT2G30520 | 32.118 | 439 | 270 | 6 | 46 | 475 | 2 | 421 | 5.75e-72 | 241 |
| MS.gene012763.t1 | AT2G30520 | 32.118 | 439 | 270 | 6 | 46 | 475 | 2 | 421 | 5.75e-72 | 241 |
| MS.gene012763.t1 | AT3G08660 | 31.078 | 473 | 286 | 11 | 10 | 473 | 23 | 464 | 3.55e-70 | 238 |
| MS.gene012763.t1 | AT3G08570 | 30.818 | 477 | 304 | 10 | 13 | 473 | 22 | 488 | 9.15e-69 | 234 |
| MS.gene012763.t1 | AT2G47860 | 30.146 | 481 | 288 | 9 | 23 | 475 | 34 | 494 | 7.28e-66 | 227 |
| MS.gene012763.t1 | AT3G50840 | 34.259 | 432 | 256 | 9 | 53 | 473 | 7 | 421 | 2.46e-65 | 223 |
| MS.gene012763.t1 | AT3G50840 | 34.259 | 432 | 256 | 9 | 53 | 473 | 7 | 421 | 2.46e-65 | 223 |
| MS.gene012763.t1 | AT5G66560 | 31.049 | 467 | 256 | 8 | 23 | 425 | 16 | 480 | 7.25e-63 | 215 |
| MS.gene012763.t1 | AT3G08660 | 31.163 | 430 | 261 | 10 | 53 | 473 | 1 | 404 | 1.24e-61 | 213 |
| MS.gene012763.t1 | AT2G47860 | 28.770 | 504 | 288 | 10 | 23 | 475 | 34 | 517 | 8.71e-61 | 214 |
| MS.gene012763.t1 | AT5G03250 | 29.923 | 391 | 243 | 6 | 111 | 473 | 1 | 388 | 1.68e-54 | 192 |
| MS.gene012763.t1 | AT3G08660 | 29.812 | 426 | 259 | 11 | 10 | 426 | 23 | 417 | 2.29e-52 | 186 |
| MS.gene012763.t1 | AT1G52770 | 36.860 | 293 | 164 | 6 | 201 | 483 | 28 | 309 | 6.52e-49 | 177 |
| MS.gene012763.t1 | AT2G47860 | 29.234 | 431 | 257 | 9 | 23 | 425 | 34 | 444 | 1.50e-48 | 176 |
| MS.gene012763.t1 | AT2G47860 | 27.753 | 454 | 257 | 10 | 23 | 425 | 34 | 467 | 8.69e-44 | 163 |
| MS.gene012763.t1 | AT3G03510 | 30.424 | 401 | 223 | 12 | 80 | 473 | 8 | 359 | 5.46e-43 | 160 |
| MS.gene012763.t1 | AT3G15570 | 34.643 | 280 | 162 | 5 | 209 | 475 | 37 | 308 | 1.60e-42 | 159 |
| MS.gene012763.t1 | AT5G48130 | 27.133 | 457 | 296 | 12 | 26 | 473 | 39 | 467 | 2.67e-42 | 162 |
| MS.gene012763.t1 | AT2G47860 | 28.753 | 393 | 235 | 8 | 111 | 475 | 1 | 376 | 5.29e-41 | 156 |
| MS.gene012763.t1 | AT2G47860 | 28.753 | 393 | 235 | 8 | 111 | 475 | 1 | 376 | 5.29e-41 | 156 |
| MS.gene012763.t1 | AT3G19850 | 26.722 | 479 | 296 | 11 | 29 | 473 | 6 | 463 | 3.12e-40 | 154 |
| MS.gene012763.t1 | AT1G50280 | 27.626 | 438 | 278 | 11 | 67 | 483 | 17 | 436 | 1.15e-39 | 152 |
| MS.gene012763.t1 | AT1G50280 | 27.830 | 424 | 272 | 10 | 67 | 469 | 50 | 460 | 1.78e-39 | 152 |
| MS.gene012763.t1 | AT5G17580 | 27.468 | 466 | 300 | 12 | 21 | 473 | 15 | 455 | 1.04e-38 | 150 |
| MS.gene012763.t1 | AT5G17580 | 27.527 | 465 | 299 | 12 | 22 | 473 | 1 | 440 | 2.60e-38 | 149 |
| MS.gene012763.t1 | AT3G22104 | 28.414 | 454 | 261 | 14 | 28 | 458 | 6 | 418 | 5.63e-34 | 136 |
| MS.gene012763.t1 | AT3G22104 | 27.559 | 381 | 215 | 11 | 98 | 458 | 4 | 343 | 2.08e-24 | 106 |
| MS.gene012763.t1 | AT3G22104 | 27.559 | 381 | 215 | 11 | 98 | 458 | 4 | 343 | 2.08e-24 | 106 |
| MS.gene012763.t1 | AT3G22104 | 27.559 | 381 | 215 | 11 | 98 | 458 | 4 | 343 | 2.08e-24 | 106 |
Find 105 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGCTTCCACCACAGCTTAT+TGG | 0.257853 | 8.1:-563336 | MS.gene012763:CDS |
| TCTTTAGGACAAGAGTTTAA+TGG | 0.264714 | 8.1:-561807 | MS.gene012763:CDS |
| CAATAGAGTCATTCATTCTA+AGG | 0.299238 | 8.1:+563773 | None:intergenic |
| AAACAACATGAAATAATTCT+AGG | 0.300269 | 8.1:-561873 | MS.gene012763:CDS |
| GTCCTAAAGATTGTTTGCTT+TGG | 0.314234 | 8.1:+561820 | None:intergenic |
| TGGAAACTTTCTTGAAGCTT+TGG | 0.319994 | 8.1:-562966 | MS.gene012763:CDS |
| ATCAGAACATAGCATGAAAA+AGG | 0.330713 | 8.1:-561553 | MS.gene012763:CDS |
| CTTTGTAGGAGTCCACATTT+TGG | 0.332378 | 8.1:+563955 | None:intergenic |
| ACGGCATGGCCACGTACTTC+TGG | 0.332882 | 8.1:+561990 | None:intergenic |
| AGCTGCACTACAGTTCTTAA+TGG | 0.333339 | 8.1:+561951 | None:intergenic |
| CTATGCATGCCGGTGGTTAC+CGG | 0.333749 | 8.1:-563298 | MS.gene012763:CDS |
| ATTGAGAAGGGAAACTTTGT+AGG | 0.333990 | 8.1:-563754 | MS.gene012763:CDS |
| ACTCTATATCATAATAATTC+TGG | 0.336966 | 8.1:+563004 | None:intergenic |
| TGATAAAGACAGAACTAATA+AGG | 0.345533 | 8.1:-563095 | MS.gene012763:CDS |
| TCCTCAGTCCACCAATCCTT+TGG | 0.347878 | 8.1:+563420 | None:intergenic |
| TTATTAAGCTTCGTGATTCC+CGG | 0.358494 | 8.1:+563279 | None:intergenic |
| AATCATAGCAAAGCCTTTGT+AGG | 0.376663 | 8.1:+563941 | None:intergenic |
| TTGCTATGATTCTAGTGATT+CGG | 0.393279 | 8.1:-563929 | MS.gene012763:CDS |
| TGTTCAGTGTAGAAAGTATC+TGG | 0.401715 | 8.1:+564236 | None:intergenic |
| ATTCATGCATTCTTGAAAGT+TGG | 0.405825 | 8.1:-563711 | MS.gene012763:CDS |
| TTGAGATCAATCAGAAATGT+AGG | 0.406103 | 8.1:-562904 | MS.gene012763:CDS |
| AGCCAAAGCAAACAATCTTT+AGG | 0.407220 | 8.1:-561822 | MS.gene012763:CDS |
| GGCAATTGACATCTATCTTA+AGG | 0.413017 | 8.1:-562758 | MS.gene012763:intron |
| TCTAGCAACCACTTGAAGAT+AGG | 0.417159 | 8.1:+562867 | None:intergenic |
| TTATCTGCCTTACTCAGATC+AGG | 0.424226 | 8.1:+562053 | None:intergenic |
| CATCGTTGATTTGTATTACA+AGG | 0.427373 | 8.1:+564098 | None:intergenic |
| TGAACAGGAGAAAGGGTCTA+TGG | 0.435017 | 8.1:-561919 | MS.gene012763:CDS |
| CTCTACTTTGAACAGGAGAA+AGG | 0.436340 | 8.1:-561927 | MS.gene012763:CDS |
| GCAGCTTCTCTACTTTGAAC+AGG | 0.439971 | 8.1:-561934 | MS.gene012763:CDS |
| AAAATGAAGTTCATGAAACT+TGG | 0.444516 | 8.1:-564266 | MS.gene012763:CDS |
| AATTCTCACACCCTCGCAAC+AGG | 0.451795 | 8.1:-563590 | MS.gene012763:intron |
| TAGCTGTTATCCACAGCACC+AGG | 0.458542 | 8.1:+562931 | None:intergenic |
| GACAGAGGGTCTGTTTCAGT+TGG | 0.461892 | 8.1:-563168 | MS.gene012763:CDS |
| GAGAGCAAGCTTACAGTTTG+AGG | 0.464638 | 8.1:-563073 | MS.gene012763:CDS |
| CCTCAGTCCACCAATCCTTT+GGG | 0.464853 | 8.1:+563421 | None:intergenic |
| CAAAATGTGGACTCCTACAA+AGG | 0.468663 | 8.1:-563954 | MS.gene012763:CDS |
| GTAATGTAGCAGTAGTTTGA+AGG | 0.478481 | 8.1:+563671 | None:intergenic |
| TGCAAATTTAGCATTAGACT+TGG | 0.484426 | 8.1:-561715 | MS.gene012763:CDS |
| GTCATTCATTCTAAGGAACT+TGG | 0.484520 | 8.1:+563780 | None:intergenic |
| AGAGTTAGTTCTAGCAGTGT+TGG | 0.487244 | 8.1:-562986 | MS.gene012763:CDS |
| TTGAAGAGACAGAGTCAGAA+AGG | 0.488396 | 8.1:-561662 | MS.gene012763:CDS |
| CCAGAGTGGTCTGAGAATCT+TGG | 0.488838 | 8.1:-563649 | MS.gene012763:CDS |
| ATGATTCTGTGCAGGTGAAA+TGG | 0.489710 | 8.1:-563494 | MS.gene012763:intron |
| TATGCATGCCGGTGGTTACC+GGG | 0.501159 | 8.1:-563297 | MS.gene012763:CDS |
| ACCATTCTGTCCCAAAGGAT+TGG | 0.504137 | 8.1:-563431 | MS.gene012763:CDS |
| TTTGCCCTTCTTCCAAAATG+TGG | 0.505993 | 8.1:-563967 | MS.gene012763:CDS |
| ACGAAGCTTAATAAAAGCTC+AGG | 0.506205 | 8.1:-563270 | MS.gene012763:CDS |
| AATTCTTGAAAGTAGAGAAA+AGG | 0.506277 | 8.1:-561763 | MS.gene012763:CDS |
| GTAGTTTGAAGGGTTGCAAT+GGG | 0.507662 | 8.1:+563682 | None:intergenic |
| ACCAATCCTTTGGGACAGAA+TGG | 0.517753 | 8.1:+563430 | None:intergenic |
| TCTACTTTGAACAGGAGAAA+GGG | 0.518033 | 8.1:-561926 | MS.gene012763:CDS |
| TGTGTAACCGGGTCTGGTGT+AGG | 0.520651 | 8.1:+563464 | None:intergenic |
| GAAACAGACCCTCTGTCTGC+AGG | 0.525704 | 8.1:+563174 | None:intergenic |
| TTCTGTCTTTATCACTGATG+AGG | 0.527594 | 8.1:+563104 | None:intergenic |
| TCACCACAGACATAAAAGAT+TGG | 0.529296 | 8.1:-561739 | MS.gene012763:CDS |
| TCAAAAGCATCTTCCCCTCC+AGG | 0.529984 | 8.1:+563877 | None:intergenic |
| AATGAATGACTCTATTGAGA+AGG | 0.532339 | 8.1:-563767 | MS.gene012763:CDS |
| ATGAATGACTCTATTGAGAA+GGG | 0.537138 | 8.1:-563766 | MS.gene012763:CDS |
| TGGTCTACTCTTGCAATGCT+CGG | 0.537710 | 8.1:+562796 | None:intergenic |
| TGAAGAGACAGAGTCAGAAA+GGG | 0.541907 | 8.1:-561661 | MS.gene012763:CDS |
| ATTCTGTCCCAAAGGATTGG+TGG | 0.547591 | 8.1:-563428 | MS.gene012763:CDS |
| GGTGCATCCTGATCTGAGTA+AGG | 0.550735 | 8.1:-562060 | MS.gene012763:CDS |
| ATGCATTCTTGAAAGTTGGA+AGG | 0.551432 | 8.1:-563707 | MS.gene012763:CDS |
| TTGTTTCTGACCTGTTGCGA+GGG | 0.556069 | 8.1:+563580 | None:intergenic |
| AAATGAAGTTCATGAAACTT+GGG | 0.559279 | 8.1:-564265 | MS.gene012763:CDS |
| AGTAGTTTGAAGGGTTGCAA+TGG | 0.564457 | 8.1:+563681 | None:intergenic |
| TCTACTTTCAAGAATTTGAG+TGG | 0.566408 | 8.1:+561770 | None:intergenic |
| ATTTGTATTACAAGGTCTGA+GGG | 0.567132 | 8.1:+564106 | None:intergenic |
| TCGTGATTCCCGGTAACCAC+CGG | 0.567730 | 8.1:+563289 | None:intergenic |
| GATTTGTATTACAAGGTCTG+AGG | 0.574070 | 8.1:+564105 | None:intergenic |
| ATAATAATTCTGGTCTGAAG+AGG | 0.580103 | 8.1:+563014 | None:intergenic |
| TCCTTCACCTACACCAGACC+CGG | 0.580358 | 8.1:-563471 | MS.gene012763:CDS |
| AAGAATGTCCCCTGGTGCTG+TGG | 0.580374 | 8.1:-562941 | MS.gene012763:CDS |
| GCTTCACCAATAAGCTGTGG+TGG | 0.583607 | 8.1:+563330 | None:intergenic |
| ACAGAGTCAGAAAGGGTGAG+AGG | 0.589004 | 8.1:-561654 | MS.gene012763:CDS |
| ACCGGGTCTGGTGTAGGTGA+AGG | 0.590318 | 8.1:+563470 | None:intergenic |
| TAATGTAGCAGTAGTTTGAA+GGG | 0.590928 | 8.1:+563672 | None:intergenic |
| AAGTAGTTCGAGCTACAAGT+TGG | 0.595940 | 8.1:-561619 | MS.gene012763:CDS |
| GCTTCATGATATACCTGGAG+GGG | 0.598800 | 8.1:-563890 | MS.gene012763:CDS |
| CCAAGATTCTCAGACCACTC+TGG | 0.602252 | 8.1:+563649 | None:intergenic |
| AGCAAGCTTACAGTTTGAGG+AGG | 0.602564 | 8.1:-563070 | MS.gene012763:CDS |
| GTGGAGCTTCATGATATACC+TGG | 0.604285 | 8.1:-563895 | MS.gene012763:CDS |
| TCTACACTGAACAAGCTACC+AGG | 0.607293 | 8.1:-564226 | MS.gene012763:intron |
| CATAGACTCCTATCTTCAAG+TGG | 0.609809 | 8.1:-562875 | MS.gene012763:CDS |
| TTTGTTTCTGACCTGTTGCG+AGG | 0.609870 | 8.1:+563579 | None:intergenic |
| AGCTTCATGATATACCTGGA+GGG | 0.613646 | 8.1:-563891 | MS.gene012763:CDS |
| CAGATAAGAAGAGACTGTGT+GGG | 0.617913 | 8.1:-562037 | MS.gene012763:CDS |
| CTTTGGAAAAGAATGTCCCC+TGG | 0.619063 | 8.1:-562949 | MS.gene012763:CDS |
| CTTTGCATGTCTATGCATGC+CGG | 0.619328 | 8.1:-563308 | MS.gene012763:CDS |
| GCATGATTCCTGCAGACAGA+GGG | 0.630954 | 8.1:-563182 | MS.gene012763:CDS |
| ACAGCACCATTCTGTCCCAA+AGG | 0.631036 | 8.1:-563436 | MS.gene012763:CDS |
| AGACCACAACGATCTATACA+AGG | 0.631528 | 8.1:-562779 | MS.gene012763:CDS |
| TTGCCTTGTATAGATCGTTG+TGG | 0.649985 | 8.1:+562776 | None:intergenic |
| TGCATGTCTATGCATGCCGG+TGG | 0.650418 | 8.1:-563305 | MS.gene012763:CDS |
| AGTTCATGAAACTTGGGACA+AGG | 0.654108 | 8.1:-564259 | MS.gene012763:CDS |
| GCAGATAAGAAGAGACTGTG+TGG | 0.654770 | 8.1:-562038 | MS.gene012763:CDS |
| AGCATGATTCCTGCAGACAG+AGG | 0.655585 | 8.1:-563183 | MS.gene012763:CDS |
| GCTGTTATCCACAGCACCAG+GGG | 0.656030 | 8.1:+562933 | None:intergenic |
| AGCTGTTATCCACAGCACCA+GGG | 0.676561 | 8.1:+562932 | None:intergenic |
| GAGCTTCATGATATACCTGG+AGG | 0.685850 | 8.1:-563892 | MS.gene012763:CDS |
| CCCAAAGGATTGGTGGACTG+AGG | 0.687423 | 8.1:-563421 | MS.gene012763:CDS |
| AAAGCTTCACCAATAAGCTG+TGG | 0.694004 | 8.1:+563327 | None:intergenic |
| TGTTACTTATCTGCTACACA+AGG | 0.712317 | 8.1:-564077 | MS.gene012763:intron |
| CTACTGCTACATTACCAGAG+TGG | 0.738581 | 8.1:-563663 | MS.gene012763:CDS |
| AAACTGACACCAGAAGTACG+TGG | 0.774606 | 8.1:-561999 | MS.gene012763:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTAATTTAAAGTAAATAAA+GGG | + | chr8.1:563145-563164 | None:intergenic | 10.0% |
| !!! | TTGTAATTTAAAGTAAATAA+AGG | + | chr8.1:563146-563165 | None:intergenic | 10.0% |
| !!! | GTAATTTAAAGTAAATAAAG+GGG | + | chr8.1:563144-563163 | None:intergenic | 15.0% |
| !!! | TAAGATATTTCTATAACAAA+AGG | + | chr8.1:563606-563625 | None:intergenic | 15.0% |
| !!! | TAATTTAAAGTAAATAAAGG+GGG | + | chr8.1:563143-563162 | None:intergenic | 15.0% |
| !! | AAACAACATGAAATAATTCT+AGG | - | chr8.1:563926-563945 | MS.gene012763:CDS | 20.0% |
| !! | ACTCTATATCATAATAATTC+TGG | + | chr8.1:562798-562817 | None:intergenic | 20.0% |
| !! | ATCCTAAAAAAATCATAAGA+AGG | - | chr8.1:564212-564231 | MS.gene012763:intron | 20.0% |
| !! | TCCTAAAAAAATCATAAGAA+GGG | - | chr8.1:564213-564232 | MS.gene012763:intron | 20.0% |
| !!! | AGCTATTTTCATAAGTTATT+CGG | + | chr8.1:563549-563568 | None:intergenic | 20.0% |
| ! | AAGGAAAAATCATAAAAGGT+AGG | + | chr8.1:563081-563100 | None:intergenic | 25.0% |
| ! | AAGTGGAAAACTTTGATTAT+TGG | - | chr8.1:563685-563704 | MS.gene012763:CDS | 25.0% |
| ! | AATGAAACTAAACACTTGTT+TGG | - | chr8.1:563402-563421 | MS.gene012763:CDS | 25.0% |
| ! | AATTCTTGAAAGTAGAGAAA+AGG | - | chr8.1:564036-564055 | MS.gene012763:intron | 25.0% |
| ! | AGGAAAAATCATAAAAGGTA+GGG | + | chr8.1:563080-563099 | None:intergenic | 25.0% |
| ! | GAAAAAAAGATAGCAATAAG+AGG | - | chr8.1:564106-564125 | MS.gene012763:CDS | 25.0% |
| ! | GTTGAAGGAAAAATCATAAA+AGG | + | chr8.1:563085-563104 | None:intergenic | 25.0% |
| ! | TCTATATTATTAGAGTCTCA+AGG | + | chr8.1:563298-563317 | None:intergenic | 25.0% |
| ! | TGATAAAGACAGAACTAATA+AGG | - | chr8.1:562704-562723 | MS.gene012763:intron | 25.0% |
| ! | TTAAAGTTGAATGCATAAAC+AGG | - | chr8.1:563718-563737 | MS.gene012763:CDS | 25.0% |
| !! | ACAAGTGTTTAGTTTCATTT+AGG | + | chr8.1:563401-563420 | None:intergenic | 25.0% |
| !! | CAAGTGTTTAGTTTCATTTA+GGG | + | chr8.1:563400-563419 | None:intergenic | 25.0% |
| !!! | AATACATGTTAGTTTGTGAA+AGG | + | chr8.1:561641-561660 | None:intergenic | 25.0% |
| !!! | GCTATTTTCATAAGTTATTC+GGG | + | chr8.1:563548-563567 | None:intergenic | 25.0% |
| !!! | TTTGGTTTGCTAAAAAACAT+GGG | + | chr8.1:563373-563392 | None:intergenic | 25.0% |
| AATGAATGACTCTATTGAGA+AGG | - | chr8.1:562032-562051 | MS.gene012763:CDS | 30.0% | |
| AATTGACATCTATCTTAAGG+TGG | - | chr8.1:563044-563063 | MS.gene012763:CDS | 30.0% | |
| ACATGTATTCTCATAAATGC+AGG | - | chr8.1:561652-561671 | MS.gene012763:CDS | 30.0% | |
| AGACTATTCGAGAAAACTTA+CGG | - | chr8.1:563466-563485 | MS.gene012763:CDS | 30.0% | |
| ATAATAATTCTGGTCTGAAG+AGG | + | chr8.1:562788-562807 | None:intergenic | 30.0% | |
| ATCAGAACATAGCATGAAAA+AGG | - | chr8.1:564246-564265 | MS.gene012763:CDS | 30.0% | |
| ATGAATGACTCTATTGAGAA+GGG | - | chr8.1:562033-562052 | MS.gene012763:CDS | 30.0% | |
| ATTCATGCATTCTTGAAAGT+TGG | - | chr8.1:562088-562107 | MS.gene012763:intron | 30.0% | |
| ATTTGTATTACAAGGTCTGA+GGG | + | chr8.1:561696-561715 | None:intergenic | 30.0% | |
| CAACCCATAATCCTATAATT+TGG | - | chr8.1:563337-563356 | MS.gene012763:CDS | 30.0% | |
| CAATAGAGTCATTCATTCTA+AGG | + | chr8.1:562029-562048 | None:intergenic | 30.0% | |
| TAATGTAGCAGTAGTTTGAA+GGG | + | chr8.1:562130-562149 | None:intergenic | 30.0% | |
| TATAAATGATGATTCTGTGC+AGG | - | chr8.1:562297-562316 | MS.gene012763:intron | 30.0% | |
| TCTACTTTCAAGAATTTGAG+TGG | + | chr8.1:564032-564051 | None:intergenic | 30.0% | |
| TGCAAATTTAGCATTAGACT+TGG | - | chr8.1:564084-564103 | MS.gene012763:CDS | 30.0% | |
| TGGCCAAATTATAGGATTAT+GGG | + | chr8.1:563343-563362 | None:intergenic | 30.0% | |
| TTGAGATCAATCAGAAATGT+AGG | - | chr8.1:562895-562914 | MS.gene012763:CDS | 30.0% | |
| TTGCTATGATTCTAGTGATT+CGG | - | chr8.1:561870-561889 | MS.gene012763:CDS | 30.0% | |
| ! | ATCTTGACATAGATCTTTTC+AGG | - | chr8.1:562410-562429 | MS.gene012763:intron | 30.0% |
| !! | AGGATTTTGAAGGATAAAGA+AGG | + | chr8.1:562768-562787 | None:intergenic | 30.0% |
| !! | CATCGTTGATTTGTATTACA+AGG | + | chr8.1:561704-561723 | None:intergenic | 30.0% |
| !! | GTTTGGTTTGCTAAAAAACA+TGG | + | chr8.1:563374-563393 | None:intergenic | 30.0% |
| !! | TCTTTAGGACAAGAGTTTAA+TGG | - | chr8.1:563992-564011 | MS.gene012763:intron | 30.0% |
| !!! | GCCCTTCTTATGATTTTTTT+AGG | + | chr8.1:564217-564236 | None:intergenic | 30.0% |
| !!! | TCTTTTCAGGTGCATAATAA+TGG | - | chr8.1:562423-562442 | MS.gene012763:intron | 30.0% |
| AATCAGGATAGGCAATTAAG+TGG | - | chr8.1:563668-563687 | MS.gene012763:CDS | 35.0% | |
| AATCATAGCAAAGCCTTTGT+AGG | + | chr8.1:561861-561880 | None:intergenic | 35.0% | |
| ACGAAGCTTAATAAAAGCTC+AGG | - | chr8.1:562529-562548 | MS.gene012763:intron | 35.0% | |
| AGCCAAAGCAAACAATCTTT+AGG | - | chr8.1:563977-563996 | MS.gene012763:intron | 35.0% | |
| ATGCATTCTTGAAAGTTGGA+AGG | - | chr8.1:562092-562111 | MS.gene012763:intron | 35.0% | |
| ATTGAGAAGGGAAACTTTGT+AGG | - | chr8.1:562045-562064 | MS.gene012763:CDS | 35.0% | |
| CTGGCCAAATTATAGGATTA+TGG | + | chr8.1:563344-563363 | None:intergenic | 35.0% | |
| GATTTGTATTACAAGGTCTG+AGG | + | chr8.1:561697-561716 | None:intergenic | 35.0% | |
| GGCAATTGACATCTATCTTA+AGG | - | chr8.1:563041-563060 | MS.gene012763:CDS | 35.0% | |
| GTAATGTAGCAGTAGTTTGA+AGG | + | chr8.1:562131-562150 | None:intergenic | 35.0% | |
| GTCCTAAAGATTGTTTGCTT+TGG | + | chr8.1:563982-564001 | None:intergenic | 35.0% | |
| TCACCACAGACATAAAAGAT+TGG | - | chr8.1:564060-564079 | MS.gene012763:intron | 35.0% | |
| TCTACTTTGAACAGGAGAAA+GGG | - | chr8.1:563873-563892 | MS.gene012763:CDS | 35.0% | |
| TGGAAACTTTCTTGAAGCTT+TGG | - | chr8.1:562833-562852 | MS.gene012763:CDS | 35.0% | |
| TTAAGGACTTAGAACTCAAG+TGG | - | chr8.1:561747-561766 | MS.gene012763:CDS | 35.0% | |
| TTAATTGCCTATCCTGATTC+TGG | + | chr8.1:563667-563686 | None:intergenic | 35.0% | |
| TTATTAAGCTTCGTGATTCC+CGG | + | chr8.1:562523-562542 | None:intergenic | 35.0% | |
| TTCTGTCTTTATCACTGATG+AGG | + | chr8.1:562698-562717 | None:intergenic | 35.0% | |
| TTTGCTAAAAAACATGGGAC+TGG | + | chr8.1:563368-563387 | None:intergenic | 35.0% | |
| ! | AGTTTCATTTAGGGTGTGTT+TGG | + | chr8.1:563391-563410 | None:intergenic | 35.0% |
| ! | ATCTGCTACACAAGGTATTA+AGG | - | chr8.1:561730-561749 | MS.gene012763:CDS | 35.0% |
| ! | CATCCAATCTTTTATGTCTG+TGG | + | chr8.1:564066-564085 | None:intergenic | 35.0% |
| ! | GTCATTCATTCTAAGGAACT+TGG | + | chr8.1:562022-562041 | None:intergenic | 35.0% |
| ! | TGTTACTTATCTGCTACACA+AGG | - | chr8.1:561722-561741 | MS.gene012763:CDS | 35.0% |
| !! | TGTTCAGTGTAGAAAGTATC+TGG | + | chr8.1:561566-561585 | None:intergenic | 35.0% |
| !!! | CTCTGTGCTAAGTTTTGTTA+TGG | - | chr8.1:561946-561965 | MS.gene012763:CDS | 35.0% |
| !!! | GTGCTGTTTTTTTGTGTAAC+CGG | + | chr8.1:562350-562369 | None:intergenic | 35.0% |
| !!! | TGCTGTTTTTTTGTGTAACC+GGG | + | chr8.1:562349-562368 | None:intergenic | 35.0% |
| !!! | TTGTTTTAGCAGTTTGTGAC+TGG | + | chr8.1:563912-563931 | None:intergenic | 35.0% |
| AAAGCTTCACCAATAAGCTG+TGG | + | chr8.1:562475-562494 | None:intergenic | 40.0% | |
| AACAACACCAGAATCAGGAT+AGG | - | chr8.1:563657-563676 | MS.gene012763:CDS | 40.0% | |
| AAGTAGTTCGAGCTACAAGT+TGG | - | chr8.1:564180-564199 | MS.gene012763:intron | 40.0% | |
| AAGTTATTCGGGAGAGCTTA+TGG | + | chr8.1:563537-563556 | None:intergenic | 40.0% | |
| ACCAATCTGACTCTAGTTGA+AGG | + | chr8.1:563100-563119 | None:intergenic | 40.0% | |
| AGACCACAACGATCTATACA+AGG | - | chr8.1:563020-563039 | MS.gene012763:CDS | 40.0% | |
| AGCTGCACTACAGTTCTTAA+TGG | + | chr8.1:563851-563870 | None:intergenic | 40.0% | |
| AGCTTCATGATATACCTGGA+GGG | - | chr8.1:561908-561927 | MS.gene012763:CDS | 40.0% | |
| AGTAGTTTGAAGGGTTGCAA+TGG | + | chr8.1:562121-562140 | None:intergenic | 40.0% | |
| AGTTCATGAAACTTGGGACA+AGG | - | chr8.1:561540-561559 | MS.gene012763:CDS | 40.0% | |
| ATAGTCTCTTGCTTGAATGC+TGG | - | chr8.1:563250-563269 | MS.gene012763:CDS | 40.0% | |
| ATCAGAACAACACCAGAATC+AGG | - | chr8.1:563652-563671 | MS.gene012763:CDS | 40.0% | |
| ATGATTCTGTGCAGGTGAAA+TGG | - | chr8.1:562305-562324 | MS.gene012763:intron | 40.0% | |
| CAAAATGTGGACTCCTACAA+AGG | - | chr8.1:561845-561864 | MS.gene012763:CDS | 40.0% | |
| CAGATAAGAAGAGACTGTGT+GGG | - | chr8.1:563762-563781 | MS.gene012763:CDS | 40.0% | |
| CATAGACTCCTATCTTCAAG+TGG | - | chr8.1:562924-562943 | MS.gene012763:CDS | 40.0% | |
| CTACGCAAATCTTTGACAAC+AGG | + | chr8.1:563194-563213 | None:intergenic | 40.0% | |
| CTCTACTTTGAACAGGAGAA+AGG | - | chr8.1:563872-563891 | MS.gene012763:CDS | 40.0% | |
| CTGTTGTCAAAGATTTGCGT+AGG | - | chr8.1:563192-563211 | MS.gene012763:CDS | 40.0% | |
| GTAGTTTGAAGGGTTGCAAT+GGG | + | chr8.1:562120-562139 | None:intergenic | 40.0% | |
| TAAAAAACATGGGACTGGAC+TGG | + | chr8.1:563363-563382 | None:intergenic | 40.0% | |
| TCCTTCAACTAGAGTCAGAT+TGG | - | chr8.1:563096-563115 | MS.gene012763:CDS | 40.0% | |
| TCTAGCAACCACTTGAAGAT+AGG | + | chr8.1:562935-562954 | None:intergenic | 40.0% | |
| TGAAGAGACAGAGTCAGAAA+GGG | - | chr8.1:564138-564157 | MS.gene012763:intron | 40.0% | |
| TTATCTGCCTTACTCAGATC+AGG | + | chr8.1:563749-563768 | None:intergenic | 40.0% | |
| TTGAAGAGACAGAGTCAGAA+AGG | - | chr8.1:564137-564156 | MS.gene012763:intron | 40.0% | |
| TTGCCTTGTATAGATCGTTG+TGG | + | chr8.1:563026-563045 | None:intergenic | 40.0% | |
| TTTGCCCTTCTTCCAAAATG+TGG | - | chr8.1:561832-561851 | MS.gene012763:CDS | 40.0% | |
| ! | CTTTGTAGGAGTCCACATTT+TGG | + | chr8.1:561847-561866 | None:intergenic | 40.0% |
| ! | TGGTCTGAAGAGGATTTTGA+AGG | + | chr8.1:562778-562797 | None:intergenic | 40.0% |
| !! | AGAGTTAGTTCTAGCAGTGT+TGG | - | chr8.1:562813-562832 | MS.gene012763:CDS | 40.0% |
| !! | GAGTCCACATTTTGGAAGAA+GGG | + | chr8.1:561839-561858 | None:intergenic | 40.0% |
| !! | GTACTTCTGGTGTCAGTTTT+TGG | + | chr8.1:563799-563818 | None:intergenic | 40.0% |
| !! | TGATTCGGAGAGTTTTACTG+TGG | - | chr8.1:561885-561904 | MS.gene012763:CDS | 40.0% |
| !!! | TTTTTTTGTGTAACCGGGTC+TGG | + | chr8.1:562344-562363 | None:intergenic | 40.0% |
| ACCATTCTGTCCCAAAGGAT+TGG | - | chr8.1:562368-562387 | MS.gene012763:intron | 45.0% | |
| AGCAAGCTTACAGTTTGAGG+AGG | - | chr8.1:562729-562748 | MS.gene012763:intron | 45.0% | |
| ATTCTGTCCCAAAGGATTGG+TGG | - | chr8.1:562371-562390 | MS.gene012763:intron | 45.0% | |
| CTACTGCTACATTACCAGAG+TGG | - | chr8.1:562136-562155 | MS.gene012763:intron | 45.0% | |
| CTTTGCATGTCTATGCATGC+CGG | - | chr8.1:562491-562510 | MS.gene012763:intron | 45.0% | |
| GAGAGCAAGCTTACAGTTTG+AGG | - | chr8.1:562726-562745 | MS.gene012763:intron | 45.0% | |
| GAGCTTCATGATATACCTGG+AGG | - | chr8.1:561907-561926 | MS.gene012763:CDS | 45.0% | |
| GCAGATAAGAAGAGACTGTG+TGG | - | chr8.1:563761-563780 | MS.gene012763:CDS | 45.0% | |
| GCAGCTTCTCTACTTTGAAC+AGG | - | chr8.1:563865-563884 | MS.gene012763:CDS | 45.0% | |
| GCTTCATGATATACCTGGAG+GGG | - | chr8.1:561909-561928 | MS.gene012763:CDS | 45.0% | |
| GTGGAGCTTCATGATATACC+TGG | - | chr8.1:561904-561923 | MS.gene012763:CDS | 45.0% | |
| TCTACACTGAACAAGCTACC+AGG | - | chr8.1:561573-561592 | MS.gene012763:CDS | 45.0% | |
| TGAACAGGAGAAAGGGTCTA+TGG | - | chr8.1:563880-563899 | MS.gene012763:CDS | 45.0% | |
| TGGTCTACTCTTGCAATGCT+CGG | + | chr8.1:563006-563025 | None:intergenic | 45.0% | |
| ! | AAACTGACACCAGAAGTACG+TGG | - | chr8.1:563800-563819 | MS.gene012763:CDS | 45.0% |
| ! | CTTTGGAAAAGAATGTCCCC+TGG | - | chr8.1:562850-562869 | MS.gene012763:CDS | 45.0% |
| !! | ACCAATCCTTTGGGACAGAA+TGG | + | chr8.1:562372-562391 | None:intergenic | 45.0% |
| !! | GACTGGACTGGCCAAATTAT+AGG | + | chr8.1:563351-563370 | None:intergenic | 45.0% |
| !! | GGAGTCCACATTTTGGAAGA+AGG | + | chr8.1:561840-561859 | None:intergenic | 45.0% |
| !! | TGGCAGAAGCTCGTTTTTGA+CGG | + | chr8.1:563831-563850 | None:intergenic | 45.0% |
| !! | TTGTTTCTGACCTGTTGCGA+GGG | + | chr8.1:562222-562241 | None:intergenic | 45.0% |
| !! | TTTGTTTCTGACCTGTTGCG+AGG | + | chr8.1:562223-562242 | None:intergenic | 45.0% |
| !!! | AAACTAAAATAAAAATATTT+TGG | + | chr8.1:561780-561799 | None:intergenic | 5.0% |
| AATTCTCACACCCTCGCAAC+AGG | - | chr8.1:562209-562228 | MS.gene012763:intron | 50.0% | |
| ACAGAGTCAGAAAGGGTGAG+AGG | - | chr8.1:564145-564164 | MS.gene012763:intron | 50.0% | |
| ACAGCACCATTCTGTCCCAA+AGG | - | chr8.1:562363-562382 | MS.gene012763:intron | 50.0% | |
| AGCATGATTCCTGCAGACAG+AGG | - | chr8.1:562616-562635 | MS.gene012763:intron | 50.0% | |
| AGCTGTTATCCACAGCACCA+GGG | + | chr8.1:562870-562889 | None:intergenic | 50.0% | |
| CCAAGATTCTCAGACCACTC+TGG | + | chr8.1:562153-562172 | None:intergenic | 50.0% | |
| CCAGAGTGGTCTGAGAATCT+TGG | - | chr8.1:562150-562169 | MS.gene012763:intron | 50.0% | |
| CCTCAGTCCACCAATCCTTT+GGG | + | chr8.1:562381-562400 | None:intergenic | 50.0% | |
| GACAGAGGGTCTGTTTCAGT+TGG | - | chr8.1:562631-562650 | MS.gene012763:intron | 50.0% | |
| GCATGATTCCTGCAGACAGA+GGG | - | chr8.1:562617-562636 | MS.gene012763:intron | 50.0% | |
| GCTTCACCAATAAGCTGTGG+TGG | + | chr8.1:562472-562491 | None:intergenic | 50.0% | |
| GGTGCATCCTGATCTGAGTA+AGG | - | chr8.1:563739-563758 | MS.gene012763:CDS | 50.0% | |
| GTGCTTCCACCACAGCTTAT+TGG | - | chr8.1:562463-562482 | MS.gene012763:intron | 50.0% | |
| TAGCTGTTATCCACAGCACC+AGG | + | chr8.1:562871-562890 | None:intergenic | 50.0% | |
| TCCTCAGTCCACCAATCCTT+TGG | + | chr8.1:562382-562401 | None:intergenic | 50.0% | |
| ! | TAAGCGCTGCTGTGAATACC+TGG | + | chr8.1:561594-561613 | None:intergenic | 50.0% |
| !! | GAAGCTCGTTTTTGACGGCA+TGG | + | chr8.1:563826-563845 | None:intergenic | 50.0% |
| !! | TCAAAAGCATCTTCCCCTCC+AGG | + | chr8.1:561925-561944 | None:intergenic | 50.0% |
| CTATGCATGCCGGTGGTTAC+CGG | - | chr8.1:562501-562520 | MS.gene012763:intron | 55.0% | |
| GAAACAGACCCTCTGTCTGC+AGG | + | chr8.1:562628-562647 | None:intergenic | 55.0% | |
| GCTGTTATCCACAGCACCAG+GGG | + | chr8.1:562869-562888 | None:intergenic | 55.0% | |
| TATGCATGCCGGTGGTTACC+GGG | - | chr8.1:562502-562521 | MS.gene012763:intron | 55.0% | |
| TCCTTCACCTACACCAGACC+CGG | - | chr8.1:562328-562347 | MS.gene012763:intron | 55.0% | |
| TCGTGATTCCCGGTAACCAC+CGG | + | chr8.1:562513-562532 | None:intergenic | 55.0% | |
| TGCATGTCTATGCATGCCGG+TGG | - | chr8.1:562494-562513 | MS.gene012763:intron | 55.0% | |
| TGTGTAACCGGGTCTGGTGT+AGG | + | chr8.1:562338-562357 | None:intergenic | 55.0% | |
| ! | AAGAATGTCCCCTGGTGCTG+TGG | - | chr8.1:562858-562877 | MS.gene012763:CDS | 55.0% |
| !! | CCCAAAGGATTGGTGGACTG+AGG | - | chr8.1:562378-562397 | MS.gene012763:intron | 55.0% |
| ACCGGGTCTGGTGTAGGTGA+AGG | + | chr8.1:562332-562351 | None:intergenic | 60.0% | |
| ACGGCATGGCCACGTACTTC+TGG | + | chr8.1:563812-563831 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 561536 | 564285 | 561536 | ID=MS.gene012763 |
| chr8.1 | mRNA | 561536 | 564285 | 561536 | ID=MS.gene012763.t1;Parent=MS.gene012763 |
| chr8.1 | exon | 564227 | 564285 | 564227 | ID=MS.gene012763.t1.exon1;Parent=MS.gene012763.t1 |
| chr8.1 | CDS | 564227 | 564285 | 564227 | ID=cds.MS.gene012763.t1;Parent=MS.gene012763.t1 |
| chr8.1 | exon | 564078 | 564147 | 564078 | ID=MS.gene012763.t1.exon2;Parent=MS.gene012763.t1 |
| chr8.1 | CDS | 564078 | 564147 | 564078 | ID=cds.MS.gene012763.t1;Parent=MS.gene012763.t1 |
| chr8.1 | exon | 563591 | 563989 | 563591 | ID=MS.gene012763.t1.exon3;Parent=MS.gene012763.t1 |
| chr8.1 | CDS | 563591 | 563989 | 563591 | ID=cds.MS.gene012763.t1;Parent=MS.gene012763.t1 |
| chr8.1 | exon | 562759 | 563502 | 562759 | ID=MS.gene012763.t1.exon4;Parent=MS.gene012763.t1 |
| chr8.1 | CDS | 562759 | 563502 | 562759 | ID=cds.MS.gene012763.t1;Parent=MS.gene012763.t1 |
| chr8.1 | exon | 561536 | 562081 | 561536 | ID=MS.gene012763.t1.exon5;Parent=MS.gene012763.t1 |
| chr8.1 | CDS | 561536 | 562081 | 561536 | ID=cds.MS.gene012763.t1;Parent=MS.gene012763.t1 |
| Gene Sequence |
| Protein sequence |
