Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene012798.t1 | XP_013458726.1 | 94.5 | 960 | 39 | 2 | 1 | 946 | 1 | 960 | 0.00E+00 | 1866.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene012798.t1 | Q69ZF3 | 38.6 | 856 | 429 | 17 | 70 | 901 | 112 | 894 | 8.5e-163 | 575.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene012798.t1 | A0A072UUL4 | 94.5 | 960 | 39 | 2 | 1 | 946 | 1 | 960 | 0.0e+00 | 1866.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene012798 | MS.gene40011 | PPI |
MS.gene012798 | MS.gene32077 | PPI |
MS.gene012798 | MS.gene004694 | PPI |
MS.gene036249 | MS.gene012798 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene012798.t1 | MTR_4g134760 | 96.042 | 960 | 24 | 2 | 1 | 946 | 1 | 960 | 0.0 | 1925 |
MS.gene012798.t1 | MTR_4g134760 | 96.287 | 781 | 16 | 1 | 179 | 946 | 1 | 781 | 0.0 | 1570 |
MS.gene012798.t1 | MTR_4g134760 | 95.942 | 690 | 15 | 1 | 270 | 946 | 1 | 690 | 0.0 | 1381 |
MS.gene012798.t1 | MTR_1g072720 | 50.546 | 916 | 390 | 14 | 29 | 889 | 36 | 943 | 0.0 | 862 |
MS.gene012798.t1 | MTR_1g072720 | 50.546 | 916 | 390 | 14 | 29 | 889 | 36 | 943 | 0.0 | 860 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene012798.t1 | AT5G49900 | 67.591 | 938 | 281 | 6 | 29 | 946 | 23 | 957 | 0.0 | 1309 |
MS.gene012798.t1 | AT5G49900 | 67.591 | 938 | 281 | 6 | 29 | 946 | 23 | 957 | 0.0 | 1309 |
MS.gene012798.t1 | AT1G33700 | 61.194 | 938 | 330 | 10 | 27 | 938 | 10 | 939 | 0.0 | 1156 |
MS.gene012798.t1 | AT1G33700 | 61.194 | 938 | 330 | 10 | 27 | 938 | 10 | 939 | 0.0 | 1156 |
MS.gene012798.t1 | AT1G33700 | 61.194 | 938 | 330 | 10 | 27 | 938 | 10 | 939 | 0.0 | 1156 |
MS.gene012798.t1 | AT4G10060 | 59.077 | 953 | 332 | 14 | 12 | 942 | 2 | 918 | 0.0 | 1095 |
MS.gene012798.t1 | AT4G10060 | 59.077 | 953 | 332 | 14 | 12 | 942 | 2 | 918 | 0.0 | 1095 |
MS.gene012798.t1 | AT1G33700 | 62.235 | 850 | 289 | 9 | 27 | 852 | 10 | 851 | 0.0 | 1070 |
MS.gene012798.t1 | AT5G49900 | 66.954 | 696 | 210 | 4 | 270 | 946 | 1 | 695 | 0.0 | 953 |
MS.gene012798.t1 | AT3G24180 | 52.169 | 899 | 386 | 13 | 20 | 889 | 21 | 904 | 0.0 | 897 |
MS.gene012798.t1 | AT3G24180 | 52.169 | 899 | 386 | 13 | 20 | 889 | 21 | 904 | 0.0 | 897 |
Find 228 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACTTACATACGTACCTTTA+TGG | 0.101704 | 8.1:-148386 | None:intergenic |
TTATATTGCAATTGCTTATA+TGG | 0.167148 | 8.1:+156384 | MS.gene012798:CDS |
GATATGCAGCTGAATAATTT+TGG | 0.177641 | 8.1:+150003 | MS.gene012798:intron |
AGCTACTCTCCTTGTAATTA+TGG | 0.181605 | 8.1:-149874 | None:intergenic |
ATTGCACATGATGCTATTAT+TGG | 0.193368 | 8.1:+155163 | MS.gene012798:CDS |
GAACTTTACTACCTGAATTC+TGG | 0.214389 | 8.1:+155603 | MS.gene012798:CDS |
TCTTCTCATGGTGTTCCTTT+AGG | 0.215555 | 8.1:+148845 | MS.gene012798:CDS |
TGCCCTGTCTTTGTTATATC+TGG | 0.218998 | 8.1:+150518 | MS.gene012798:CDS |
TTCTTTATATCTGGCTTCCC+TGG | 0.228231 | 8.1:-149305 | None:intergenic |
GGTTTCTCTTCACAAGTTAA+AGG | 0.240637 | 8.1:-149006 | None:intergenic |
ATGGCCTACTTCTTTATATC+TGG | 0.255739 | 8.1:-149314 | None:intergenic |
GGGAAACGAGGAGCTGTAAA+TGG | 0.259382 | 8.1:+156912 | MS.gene012798:CDS |
CTGGAGGAAGGGTTTATTAC+AGG | 0.269362 | 8.1:+155021 | MS.gene012798:CDS |
AGTTTGTTCTTCAGGTTTAC+AGG | 0.271227 | 8.1:+156308 | MS.gene012798:CDS |
GTCTTTGCCAATCTTCAATC+TGG | 0.274651 | 8.1:-155457 | None:intergenic |
GAAAACTGATTTGCTAAAAC+TGG | 0.279544 | 8.1:-149027 | None:intergenic |
TGGATCCAGAAGTCTATTTC+AGG | 0.293234 | 8.1:+157438 | MS.gene012798:CDS |
AGTTCATTCAAAAGGGTAAC+AGG | 0.294104 | 8.1:-155585 | None:intergenic |
CACAAGAGTTTCATCTTTCC+AGG | 0.294891 | 8.1:-156157 | None:intergenic |
GAATCCAAAGTTTGTTCTTC+AGG | 0.297782 | 8.1:+156300 | MS.gene012798:CDS |
CTCCCATTGGTTATCGTCTA+TGG | 0.306009 | 8.1:+148651 | MS.gene012798:CDS |
CAGTCCAAGCTTCCGGAGTT+TGG | 0.310319 | 8.1:-157222 | None:intergenic |
CCTCCAGGGAACTTGACTTC+AGG | 0.335725 | 8.1:-155005 | None:intergenic |
TGCTGCTGATGTTGCCATAA+AGG | 0.342243 | 8.1:+148372 | MS.gene012798:CDS |
TGCATTGCCCATATGGCTAA+TGG | 0.348844 | 8.1:-157280 | None:intergenic |
TATAACCTGAAATAGACTTC+TGG | 0.351243 | 8.1:-157443 | None:intergenic |
AACTTTACTACCTGAATTCT+GGG | 0.352039 | 8.1:+155604 | MS.gene012798:CDS |
TCTCCTCCTTCAACTTTAGA+AGG | 0.354918 | 8.1:-157414 | None:intergenic |
GGTGCTGTTCCTCATGATAT+TGG | 0.358561 | 8.1:+156211 | MS.gene012798:CDS |
TGAACACTAAGTTCAAGTTT+TGG | 0.361098 | 8.1:-156100 | None:intergenic |
CCAGGAAAACATGACTGATA+TGG | 0.362330 | 8.1:+157025 | MS.gene012798:CDS |
GGTAGTAAAGTTCATTCAAA+AGG | 0.366090 | 8.1:-155593 | None:intergenic |
GCTACTCTCCTTGTAATTAT+GGG | 0.370281 | 8.1:-149873 | None:intergenic |
TTCCTTCAAGATAAAGAAAC+TGG | 0.371553 | 8.1:-156009 | None:intergenic |
GGCCAGTTTCTTTATCTTGA+AGG | 0.374193 | 8.1:+156007 | MS.gene012798:CDS |
GTAAGTTGTGGAGGTTTCCC+TGG | 0.375069 | 8.1:-148469 | None:intergenic |
TCTTTAGCAGTCCAAGCTTC+CGG | 0.375607 | 8.1:-157229 | None:intergenic |
GACCCGTGGTCTGAAGTAAA+TGG | 0.376965 | 8.1:+156241 | MS.gene012798:CDS |
CAATGCAATCACGAGAAATA+TGG | 0.384729 | 8.1:+156967 | MS.gene012798:CDS |
TTGTAATTATGGGGTATAAC+AGG | 0.385814 | 8.1:-149863 | None:intergenic |
CATGTTTCAATTCCTGATGC+TGG | 0.388402 | 8.1:-149634 | None:intergenic |
CGTCACCATCCCTGTCAAAT+TGG | 0.389511 | 8.1:-156408 | None:intergenic |
TCATGTACTGTCCATGCCCT+TGG | 0.389887 | 8.1:-149703 | None:intergenic |
TTGGTATCAAGGAAGGTTCT+TGG | 0.391628 | 8.1:+156190 | MS.gene012798:CDS |
ATAACTGATAAGTACCATTC+AGG | 0.394501 | 8.1:-155503 | None:intergenic |
GTGTTCCTTTAGGTGGTGTT+GGG | 0.394512 | 8.1:+148855 | MS.gene012798:CDS |
GTGCATAGTTTAGTTAATAT+AGG | 0.394589 | 8.1:+155797 | MS.gene012798:CDS |
TTTAGAGAAAATCCAGCATC+AGG | 0.398014 | 8.1:+149622 | MS.gene012798:intron |
TGCCCACTGCATTGCCCATA+TGG | 0.403270 | 8.1:-157287 | None:intergenic |
ATCTTCTCTTCTCCAACAAT+TGG | 0.403373 | 8.1:-156837 | None:intergenic |
TAAACCTGAAGAACAAACTT+TGG | 0.405705 | 8.1:-156304 | None:intergenic |
AAGATTAAGTACCCTTCCTT+TGG | 0.413526 | 8.1:-148696 | None:intergenic |
TCATAATGTCGAGCGAGCTT+TGG | 0.416449 | 8.1:-157319 | None:intergenic |
AGCTAATTGATCAGCTTGTA+TGG | 0.417046 | 8.1:-156680 | None:intergenic |
CTGGATCATTGTTGCAGCTA+AGG | 0.420338 | 8.1:-157006 | None:intergenic |
CTCCAGGGAACTTGACTTCA+GGG | 0.421106 | 8.1:-155004 | None:intergenic |
GGGGTATAACAGGTGAAATC+TGG | 0.423473 | 8.1:-149853 | None:intergenic |
GGTGTTCCTTTAGGTGGTGT+TGG | 0.426591 | 8.1:+148854 | MS.gene012798:CDS |
ATTGTGGGTAGCAGCACTTC+AGG | 0.426923 | 8.1:+156510 | MS.gene012798:CDS |
CTCATGCTAGGATGCCTGAT+GGG | 0.430554 | 8.1:+150309 | MS.gene012798:intron |
TATGACACATGGTCTGTATC+TGG | 0.434538 | 8.1:+156466 | MS.gene012798:CDS |
CATGTGTCATAGGTTTGATC+AGG | 0.436014 | 8.1:-156454 | None:intergenic |
TTCAATTATGATAGCAGTTG+TGG | 0.438208 | 8.1:+156643 | MS.gene012798:CDS |
ACATGCGCCCATTAGCCATA+TGG | 0.439365 | 8.1:+157272 | MS.gene012798:CDS |
CATGTACTGTCCATGCCCTT+GGG | 0.439924 | 8.1:-149702 | None:intergenic |
AGATACAGACCATGTGTCAT+AGG | 0.442430 | 8.1:-156464 | None:intergenic |
CATGTGGCATGAAATTAAAC+AGG | 0.442480 | 8.1:+150568 | MS.gene012798:CDS |
AGAAGTTTGCTCAAGCTGTC+TGG | 0.449380 | 8.1:+156353 | MS.gene012798:CDS |
TCTTTATATCTGGCTTCCCT+GGG | 0.451028 | 8.1:-149304 | None:intergenic |
CAAAACCAGGATCATCCATT+GGG | 0.452311 | 8.1:+154907 | MS.gene012798:CDS |
CCTGCATCAAAGTCTGCATA+TGG | 0.454083 | 8.1:+155950 | MS.gene012798:CDS |
CTTATATGGACCAATTTGAC+AGG | 0.456647 | 8.1:+156398 | MS.gene012798:CDS |
CTTTCCAAACTCCGGAAGCT+TGG | 0.457462 | 8.1:+157218 | MS.gene012798:CDS |
GGAGGACAATCAGAATTTAC+TGG | 0.458343 | 8.1:+150149 | MS.gene012798:CDS |
TTCTTCAGTTCAGGAAGCAT+TGG | 0.463698 | 8.1:+148943 | MS.gene012798:intron |
AGCTCACCTTCTAAAGTTGA+AGG | 0.465658 | 8.1:+157408 | MS.gene012798:CDS |
GCATTGCCCATATGGCTAAT+GGG | 0.470463 | 8.1:-157279 | None:intergenic |
TGGATTAAGGCTGTTGACCC+AGG | 0.471737 | 8.1:+148451 | MS.gene012798:intron |
CATGCGCCCATTAGCCATAT+GGG | 0.474287 | 8.1:+157273 | MS.gene012798:CDS |
TCTTTGCCAATCTTCAATCT+GGG | 0.475057 | 8.1:-155456 | None:intergenic |
ACTTGAACTTAGTGTTCAAA+GGG | 0.475209 | 8.1:+156105 | MS.gene012798:CDS |
TGCGTATAGTGGTGGATTGT+GGG | 0.476030 | 8.1:+156495 | MS.gene012798:CDS |
CTGTAATAAACCCTTCCTCC+AGG | 0.476382 | 8.1:-155020 | None:intergenic |
TTCTGAGACATGAACATGTT+CGG | 0.477944 | 8.1:-150495 | None:intergenic |
AGCACACCATGCACCCCATC+AGG | 0.478586 | 8.1:-150323 | None:intergenic |
GTGTGCATTCAGAATTCTGT+TGG | 0.480309 | 8.1:+150128 | MS.gene012798:intron |
CAGGAATTGAAACATGGGAT+TGG | 0.480599 | 8.1:+149641 | MS.gene012798:CDS |
TGCCCTGAAGTCAAGTTCCC+TGG | 0.483440 | 8.1:+155002 | MS.gene012798:CDS |
TCTTCAGGTTTACAGGGATG+TGG | 0.485017 | 8.1:+156315 | MS.gene012798:CDS |
TACAGGGATGTGGTTGCCAC+TGG | 0.485316 | 8.1:+156325 | MS.gene012798:CDS |
GCATGGTCTAGTGATGGTCT+CGG | 0.487694 | 8.1:+157080 | MS.gene012798:CDS |
ATAAATGTTGGCAGGAAAGA+TGG | 0.487757 | 8.1:+148309 | None:intergenic |
GAGTAAGTCTTCTCCAAGAA+GGG | 0.489356 | 8.1:+155972 | MS.gene012798:CDS |
GAACCAGATATAACAAAGAC+AGG | 0.489794 | 8.1:-150521 | None:intergenic |
AATCATCTCTTTGAAAGATA+AGG | 0.491279 | 8.1:-148545 | None:intergenic |
GTGCGTATAGTGGTGGATTG+TGG | 0.492982 | 8.1:+156494 | MS.gene012798:CDS |
CTAAAGTTGAAGGAGGAGAC+TGG | 0.493503 | 8.1:+157418 | MS.gene012798:CDS |
ACTCTTGTGTGATGGACAAT+TGG | 0.494421 | 8.1:+156171 | MS.gene012798:CDS |
CAGGAAATCTCTTGTCCTCA+AGG | 0.495256 | 8.1:-155484 | None:intergenic |
TGGCAGCTTCTTCACGAACA+TGG | 0.498458 | 8.1:-148676 | None:intergenic |
ATACAAGCTGATCAATTAGC+TGG | 0.499352 | 8.1:+156682 | MS.gene012798:CDS |
AACTTGAACTTAGTGTTCAA+AGG | 0.499425 | 8.1:+156104 | MS.gene012798:CDS |
AGGACAAGAGATTTCCTGAA+TGG | 0.500451 | 8.1:+155489 | MS.gene012798:CDS |
GTCTCCAACCTCATGTGCTA+AGG | 0.502611 | 8.1:-156542 | None:intergenic |
ATCAATCCATAAATGTTGGC+AGG | 0.502657 | 8.1:+148301 | None:intergenic |
GTTACATGACGCTTAGCAAA+AGG | 0.503532 | 8.1:-148821 | None:intergenic |
CGCTGCCACGTAAGTTGTGG+AGG | 0.506213 | 8.1:-148478 | None:intergenic |
ATAATCTTTATAATACAGAT+AGG | 0.506994 | 8.1:+156266 | MS.gene012798:CDS |
TCAAAACCAGGATCATCCAT+TGG | 0.508472 | 8.1:+154906 | MS.gene012798:CDS |
GCAGTACTGATGCATGATCC+TGG | 0.513335 | 8.1:+156139 | MS.gene012798:CDS |
CGCCATAGACGATAACCAAT+GGG | 0.513371 | 8.1:-148653 | None:intergenic |
ACATGGGATTGGAATATGAA+TGG | 0.513380 | 8.1:+149652 | MS.gene012798:CDS |
GACATGTCAACATTCCCATC+AGG | 0.520071 | 8.1:-156942 | None:intergenic |
TATTCAAGCGTACTATGCCC+AGG | 0.520326 | 8.1:+149287 | MS.gene012798:CDS |
TCTCATGGTGTTCCTTTAGG+TGG | 0.521227 | 8.1:+148848 | MS.gene012798:CDS |
CTTAGCTGCAACAATGATCC+AGG | 0.521713 | 8.1:+157007 | MS.gene012798:CDS |
CAGCATCAGGAATTGAAACA+TGG | 0.526613 | 8.1:+149635 | MS.gene012798:CDS |
CAATCACGAGAAATATGGTC+AGG | 0.527149 | 8.1:+156972 | MS.gene012798:CDS |
AGCACATGAGGTTGGAGACA+AGG | 0.527943 | 8.1:+156546 | MS.gene012798:CDS |
TTGCGCTGCCACGTAAGTTG+TGG | 0.532147 | 8.1:-148481 | None:intergenic |
AATCTCTTGTCCTCAAGGAT+TGG | 0.532991 | 8.1:-155479 | None:intergenic |
GGAAACGAGGAGCTGTAAAT+GGG | 0.534811 | 8.1:+156913 | MS.gene012798:CDS |
GGGAGTCCCAGATTGAAGAT+TGG | 0.537150 | 8.1:+155450 | MS.gene012798:CDS |
GGAGTAAGTCTTCTCCAAGA+AGG | 0.537592 | 8.1:+155971 | MS.gene012798:CDS |
TGCAGGTATGCTAGAGCATG+TGG | 0.537618 | 8.1:+156807 | MS.gene012798:intron |
AAAGATAAGGTGAATTCCGA+TGG | 0.538626 | 8.1:-148532 | None:intergenic |
GTTATATCTGGTTCTCACGA+GGG | 0.540028 | 8.1:+150530 | MS.gene012798:CDS |
GTGAAGAAGCTGCCAAAGGA+AGG | 0.540272 | 8.1:+148684 | MS.gene012798:CDS |
AGCTGCAATTGCAAATGTGA+CGG | 0.546271 | 8.1:-150465 | None:intergenic |
CATGGTCTAGTGATGGTCTC+GGG | 0.546754 | 8.1:+157081 | MS.gene012798:CDS |
ACCCACCCAACACCACCTAA+AGG | 0.546866 | 8.1:-148860 | None:intergenic |
TTACAGGTCAATTTCAGCGT+TGG | 0.546996 | 8.1:+148974 | MS.gene012798:CDS |
CAGTTATTCTTTCCAAACTC+CGG | 0.549508 | 8.1:+157210 | MS.gene012798:intron |
AAGTCAAGTTCCCTGGAGGA+AGG | 0.550116 | 8.1:+155009 | MS.gene012798:CDS |
TATATGACTTTACTTGCAAG+AGG | 0.552672 | 8.1:+157464 | MS.gene012798:CDS |
CGTCATGTAACTTCTTCTCA+TGG | 0.553671 | 8.1:+148833 | MS.gene012798:CDS |
ACACCTGTGCCTTCAAAACC+AGG | 0.554288 | 8.1:+154894 | MS.gene012798:CDS |
TGTTATATCTGGTTCTCACG+AGG | 0.555097 | 8.1:+150529 | MS.gene012798:CDS |
GCTGCCCCAATGGATGATCC+TGG | 0.555639 | 8.1:-154912 | None:intergenic |
CCATATGCAGACTTTGATGC+AGG | 0.556702 | 8.1:-155950 | None:intergenic |
GTAGTAAAGTTCATTCAAAA+GGG | 0.558497 | 8.1:-155592 | None:intergenic |
GCTGCAATTGCAAATGTGAC+GGG | 0.559690 | 8.1:-150464 | None:intergenic |
TGCAAATGCAAATGTTCCAT+CGG | 0.560180 | 8.1:+148516 | MS.gene012798:CDS |
TGCTGCAATAGCTGCCCCAA+TGG | 0.561374 | 8.1:-154922 | None:intergenic |
AGGATGCCTGATGGGGTGCA+TGG | 0.561500 | 8.1:+150317 | MS.gene012798:intron |
TAAGTTGTGGAGGTTTCCCT+GGG | 0.562219 | 8.1:-148468 | None:intergenic |
CGCGTCAGCCTTAGCACATG+AGG | 0.562940 | 8.1:+156534 | MS.gene012798:CDS |
ATGGACCAATTTGACAGGGA+TGG | 0.563977 | 8.1:+156403 | MS.gene012798:CDS |
ACGTTATGAAAGTGAAGGGT+GGG | 0.565450 | 8.1:+156892 | MS.gene012798:intron |
GTTTGTTCTTCAGGTTTACA+GGG | 0.567980 | 8.1:+156309 | MS.gene012798:CDS |
GCAATTGCAATATAAACAGA+TGG | 0.574141 | 8.1:-156376 | None:intergenic |
GATATGGCATTTCAAACTGC+TGG | 0.574183 | 8.1:+157041 | MS.gene012798:CDS |
CATATCATGCATTATACCCA+AGG | 0.575550 | 8.1:+149686 | MS.gene012798:CDS |
AGCAAACTTCTTGTCACCAG+TGG | 0.578708 | 8.1:-156341 | None:intergenic |
AGTCAAGTTCCCTGGAGGAA+GGG | 0.579528 | 8.1:+155010 | MS.gene012798:CDS |
TGTAATAAACCCTTCCTCCA+GGG | 0.581327 | 8.1:-155019 | None:intergenic |
TAGCCATATGGGCAATGCAG+TGG | 0.582269 | 8.1:+157284 | MS.gene012798:CDS |
ACATTACGCTGAGCATCAGA+TGG | 0.582710 | 8.1:-154957 | None:intergenic |
GTGATGGACAATTGGTATCA+AGG | 0.587742 | 8.1:+156179 | MS.gene012798:CDS |
TCTCATGCTAGGATGCCTGA+TGG | 0.588251 | 8.1:+150308 | MS.gene012798:intron |
TCAGCCTTAGCACATGAGGT+TGG | 0.589447 | 8.1:+156538 | MS.gene012798:CDS |
GGATTAAGGCTGTTGACCCA+GGG | 0.590607 | 8.1:+148452 | MS.gene012798:intron |
AGCCATATGGGCAATGCAGT+GGG | 0.592770 | 8.1:+157285 | MS.gene012798:CDS |
GTGTTTCAGTAAAATTCAGA+TGG | 0.594344 | 8.1:-154875 | None:intergenic |
ATGCATTATACCCAAGGGCA+TGG | 0.597114 | 8.1:+149692 | MS.gene012798:CDS |
GCACATGAGGTTGGAGACAA+GGG | 0.597566 | 8.1:+156547 | MS.gene012798:CDS |
CAGCAGCAGAAGAGTTGTTG+TGG | 0.597928 | 8.1:-148357 | None:intergenic |
ATGGCATTTCAAACTGCTGG+TGG | 0.598083 | 8.1:+157044 | MS.gene012798:CDS |
AGCCATTTACTTCAGACCAC+GGG | 0.600886 | 8.1:-156243 | None:intergenic |
TGTTATACCCCATAATTACA+AGG | 0.602139 | 8.1:+149865 | MS.gene012798:CDS |
CTTTACTACCTGAATTCTGG+GGG | 0.604887 | 8.1:+155606 | MS.gene012798:CDS |
GCGCCATAGACGATAACCAA+TGG | 0.605451 | 8.1:-148654 | None:intergenic |
ATTATGTCTAGATCCCATGC+TGG | 0.605498 | 8.1:+157373 | MS.gene012798:CDS |
AGCATCAGGAATTGAAACAT+GGG | 0.607629 | 8.1:+149636 | MS.gene012798:CDS |
TGGACAATTGGTATCAAGGA+AGG | 0.608068 | 8.1:+156183 | MS.gene012798:CDS |
CTACTCTCCTTGTAATTATG+GGG | 0.608714 | 8.1:-149872 | None:intergenic |
TATGCAGACTTTGATGCAGG+TGG | 0.613227 | 8.1:-155947 | None:intergenic |
AAGATGAAACTCTTGTGTGA+TGG | 0.614265 | 8.1:+156163 | MS.gene012798:CDS |
AACGTTATGAAAGTGAAGGG+TGG | 0.614586 | 8.1:+156891 | MS.gene012798:intron |
TGAAGAAGCTGCCAAAGGAA+GGG | 0.616650 | 8.1:+148685 | MS.gene012798:CDS |
GTTCATTCAAAAGGGTAACA+GGG | 0.620778 | 8.1:-155584 | None:intergenic |
CAAGAAGGGGAAGAAAACAT+TGG | 0.621871 | 8.1:+155986 | MS.gene012798:CDS |
ATATTAACTAAACTATGCAC+AGG | 0.622452 | 8.1:-155794 | None:intergenic |
TCATGCTAGGATGCCTGATG+GGG | 0.622952 | 8.1:+150310 | MS.gene012798:intron |
TGCATTCAGAATTCTGTTGG+AGG | 0.623578 | 8.1:+150131 | MS.gene012798:intron |
ATCAGAAATGAATCCATCCA+AGG | 0.623678 | 8.1:-155834 | None:intergenic |
TTGTATTTGCTCAACTACTG+TGG | 0.625108 | 8.1:-155921 | None:intergenic |
TAGCCATTTACTTCAGACCA+CGG | 0.625843 | 8.1:-156244 | None:intergenic |
CTGATCAAACCTATGACACA+TGG | 0.628166 | 8.1:+156455 | MS.gene012798:CDS |
AAGGGCATGGACAGTACATG+AGG | 0.628910 | 8.1:+149705 | MS.gene012798:CDS |
GTATCTCAGCGAAGGACATG+TGG | 0.629934 | 8.1:+150552 | MS.gene012798:CDS |
CAATTTGACAGGGATGGTGA+CGG | 0.631789 | 8.1:+156409 | MS.gene012798:CDS |
CTGATCAATTAGCTGGACAA+TGG | 0.631978 | 8.1:+156689 | MS.gene012798:CDS |
TGGCATTTCAAACTGCTGGT+GGG | 0.633737 | 8.1:+157045 | MS.gene012798:CDS |
TCACGAGGGTATCTCAGCGA+AGG | 0.634127 | 8.1:+150544 | MS.gene012798:CDS |
TCACCTTCTAAAGTTGAAGG+AGG | 0.634605 | 8.1:+157411 | MS.gene012798:CDS |
GACGGAATGATTGAGAATGA+AGG | 0.637589 | 8.1:+156427 | MS.gene012798:CDS |
ATGTGTCATAGGTTTGATCA+GGG | 0.637661 | 8.1:-156453 | None:intergenic |
GGAAACCTCCACAACTTACG+TGG | 0.637742 | 8.1:+148473 | MS.gene012798:CDS |
CTCATGTGCTAAGGCTGACG+CGG | 0.639032 | 8.1:-156533 | None:intergenic |
TCTGGTGTAAGTGCGTATAG+TGG | 0.639365 | 8.1:+156484 | MS.gene012798:CDS |
TACAGTCCATGTGAAAAGCA+AGG | 0.643728 | 8.1:-150046 | None:intergenic |
ATCTTTATAATACAGATAGG+TGG | 0.643909 | 8.1:+156269 | MS.gene012798:CDS |
TTATATGGACCAATTTGACA+GGG | 0.646668 | 8.1:+156399 | MS.gene012798:CDS |
GTTCGTGAAGAAGCTGCCAA+AGG | 0.646721 | 8.1:+148680 | MS.gene012798:CDS |
AAGGAATCGAGTATCAAATG+TGG | 0.647406 | 8.1:+156026 | MS.gene012798:CDS |
AAAGTGAAGGGTGGGAAACG+AGG | 0.648414 | 8.1:+156900 | MS.gene012798:intron |
ACTTTACTACCTGAATTCTG+GGG | 0.654251 | 8.1:+155605 | MS.gene012798:CDS |
GAAGCTGCATGGTCTAGTGA+TGG | 0.655500 | 8.1:+157074 | MS.gene012798:CDS |
GTGGGATATATGAAGCTGCA+TGG | 0.659862 | 8.1:+157063 | MS.gene012798:CDS |
ATTCAAGCGTACTATGCCCA+GGG | 0.662435 | 8.1:+149288 | MS.gene012798:CDS |
GGTGTAAGTGCGTATAGTGG+TGG | 0.665798 | 8.1:+156487 | MS.gene012798:CDS |
AGTAAGTCTTCTCCAAGAAG+GGG | 0.666737 | 8.1:+155973 | MS.gene012798:CDS |
ATATCATGCATTATACCCAA+GGG | 0.677181 | 8.1:+149687 | MS.gene012798:CDS |
TAATAAATCTGATGTGTACG+AGG | 0.680587 | 8.1:+157345 | MS.gene012798:CDS |
TCACTGATTCCAATATCATG+AGG | 0.687909 | 8.1:-156220 | None:intergenic |
TGATGTAGAACATTGTCAGT+GGG | 0.690773 | 8.1:+155430 | MS.gene012798:intron |
TAAATGGGATGTTACCTGAT+GGG | 0.692986 | 8.1:+156928 | MS.gene012798:CDS |
GAAGAAAATGAACAAGAACA+TGG | 0.694841 | 8.1:+148334 | MS.gene012798:CDS |
AACCAGATATAACAAAGACA+GGG | 0.697803 | 8.1:-150520 | None:intergenic |
TTGGCAAAGACCAATCCTTG+AGG | 0.699228 | 8.1:+155469 | MS.gene012798:CDS |
ATATTGGAATCAGTGACCCG+TGG | 0.701495 | 8.1:+156227 | MS.gene012798:CDS |
GTAAATGGGATGTTACCTGA+TGG | 0.701672 | 8.1:+156927 | MS.gene012798:CDS |
CCTGAAGTCAAGTTCCCTGG+AGG | 0.702199 | 8.1:+155005 | MS.gene012798:CDS |
AGGGCATGGACAGTACATGA+GGG | 0.704483 | 8.1:+149706 | MS.gene012798:CDS |
AAAACCAGGATCATCCATTG+GGG | 0.713022 | 8.1:+154908 | MS.gene012798:CDS |
GTGATGTAGAACATTGTCAG+TGG | 0.718010 | 8.1:+155429 | MS.gene012798:intron |
TTTACTACCTGAATTCTGGG+GGG | 0.733229 | 8.1:+155607 | MS.gene012798:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 148313 | 157498 | 148313 | ID=MS.gene012798 |
chr8.1 | mRNA | 148313 | 157498 | 148313 | ID=MS.gene012798.t1;Parent=MS.gene012798 |
chr8.1 | exon | 148313 | 148393 | 148313 | ID=MS.gene012798.t1.exon1;Parent=MS.gene012798.t1 |
chr8.1 | CDS | 148313 | 148393 | 148313 | ID=cds.MS.gene012798.t1;Parent=MS.gene012798.t1 |
chr8.1 | exon | 148460 | 148573 | 148460 | ID=MS.gene012798.t1.exon2;Parent=MS.gene012798.t1 |
chr8.1 | CDS | 148460 | 148573 | 148460 | ID=cds.MS.gene012798.t1;Parent=MS.gene012798.t1 |
chr8.1 | exon | 148650 | 148706 | 148650 | ID=MS.gene012798.t1.exon3;Parent=MS.gene012798.t1 |
chr8.1 | CDS | 148650 | 148706 | 148650 | ID=cds.MS.gene012798.t1;Parent=MS.gene012798.t1 |
chr8.1 | exon | 148806 | 148876 | 148806 | ID=MS.gene012798.t1.exon4;Parent=MS.gene012798.t1 |
chr8.1 | CDS | 148806 | 148876 | 148806 | ID=cds.MS.gene012798.t1;Parent=MS.gene012798.t1 |
chr8.1 | exon | 148951 | 149050 | 148951 | ID=MS.gene012798.t1.exon5;Parent=MS.gene012798.t1 |
chr8.1 | CDS | 148951 | 149050 | 148951 | ID=cds.MS.gene012798.t1;Parent=MS.gene012798.t1 |
chr8.1 | exon | 149257 | 149327 | 149257 | ID=MS.gene012798.t1.exon6;Parent=MS.gene012798.t1 |
chr8.1 | CDS | 149257 | 149327 | 149257 | ID=cds.MS.gene012798.t1;Parent=MS.gene012798.t1 |
chr8.1 | exon | 149627 | 149727 | 149627 | ID=MS.gene012798.t1.exon7;Parent=MS.gene012798.t1 |
chr8.1 | CDS | 149627 | 149727 | 149627 | ID=cds.MS.gene012798.t1;Parent=MS.gene012798.t1 |
chr8.1 | exon | 149822 | 149922 | 149822 | ID=MS.gene012798.t1.exon8;Parent=MS.gene012798.t1 |
chr8.1 | CDS | 149822 | 149922 | 149822 | ID=cds.MS.gene012798.t1;Parent=MS.gene012798.t1 |
chr8.1 | exon | 150012 | 150065 | 150012 | ID=MS.gene012798.t1.exon9;Parent=MS.gene012798.t1 |
chr8.1 | CDS | 150012 | 150065 | 150012 | ID=cds.MS.gene012798.t1;Parent=MS.gene012798.t1 |
chr8.1 | exon | 150140 | 150195 | 150140 | ID=MS.gene012798.t1.exon10;Parent=MS.gene012798.t1 |
chr8.1 | CDS | 150140 | 150195 | 150140 | ID=cds.MS.gene012798.t1;Parent=MS.gene012798.t1 |
chr8.1 | exon | 150319 | 150357 | 150319 | ID=MS.gene012798.t1.exon11;Parent=MS.gene012798.t1 |
chr8.1 | CDS | 150319 | 150357 | 150319 | ID=cds.MS.gene012798.t1;Parent=MS.gene012798.t1 |
chr8.1 | exon | 150445 | 150589 | 150445 | ID=MS.gene012798.t1.exon12;Parent=MS.gene012798.t1 |
chr8.1 | CDS | 150445 | 150589 | 150445 | ID=cds.MS.gene012798.t1;Parent=MS.gene012798.t1 |
chr8.1 | exon | 154861 | 155042 | 154861 | ID=MS.gene012798.t1.exon13;Parent=MS.gene012798.t1 |
chr8.1 | CDS | 154861 | 155042 | 154861 | ID=cds.MS.gene012798.t1;Parent=MS.gene012798.t1 |
chr8.1 | exon | 155117 | 155184 | 155117 | ID=MS.gene012798.t1.exon14;Parent=MS.gene012798.t1 |
chr8.1 | CDS | 155117 | 155184 | 155117 | ID=cds.MS.gene012798.t1;Parent=MS.gene012798.t1 |
chr8.1 | exon | 155438 | 155510 | 155438 | ID=MS.gene012798.t1.exon15;Parent=MS.gene012798.t1 |
chr8.1 | CDS | 155438 | 155510 | 155438 | ID=cds.MS.gene012798.t1;Parent=MS.gene012798.t1 |
chr8.1 | exon | 155581 | 155642 | 155581 | ID=MS.gene012798.t1.exon16;Parent=MS.gene012798.t1 |
chr8.1 | CDS | 155581 | 155642 | 155581 | ID=cds.MS.gene012798.t1;Parent=MS.gene012798.t1 |
chr8.1 | exon | 155783 | 156710 | 155783 | ID=MS.gene012798.t1.exon17;Parent=MS.gene012798.t1 |
chr8.1 | CDS | 155783 | 156710 | 155783 | ID=cds.MS.gene012798.t1;Parent=MS.gene012798.t1 |
chr8.1 | exon | 156812 | 156864 | 156812 | ID=MS.gene012798.t1.exon18;Parent=MS.gene012798.t1 |
chr8.1 | CDS | 156812 | 156864 | 156812 | ID=cds.MS.gene012798.t1;Parent=MS.gene012798.t1 |
chr8.1 | exon | 156904 | 157102 | 156904 | ID=MS.gene012798.t1.exon19;Parent=MS.gene012798.t1 |
chr8.1 | CDS | 156904 | 157102 | 156904 | ID=cds.MS.gene012798.t1;Parent=MS.gene012798.t1 |
chr8.1 | exon | 157213 | 157498 | 157213 | ID=MS.gene012798.t1.exon20;Parent=MS.gene012798.t1 |
chr8.1 | CDS | 157213 | 157498 | 157213 | ID=cds.MS.gene012798.t1;Parent=MS.gene012798.t1 |
Gene Sequence |
Protein sequence |