Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013124.t1 | XP_003602847.1 | 83.8 | 296 | 39 | 4 | 1 | 293 | 1 | 290 | 1.80E-126 | 462.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013124.t1 | Q08935 | 30.6 | 180 | 114 | 4 | 93 | 263 | 88 | 265 | 2.3e-18 | 94.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013124.t1 | G7J4G2 | 83.8 | 296 | 39 | 4 | 1 | 293 | 1 | 290 | 1.3e-126 | 462.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene63514 | MS.gene013124 | PPI |
| MS.gene56256 | MS.gene013124 | PPI |
| MS.gene51627 | MS.gene013124 | PPI |
| MS.gene009458 | MS.gene013124 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013124.t1 | MTR_3g099590 | 86.824 | 296 | 30 | 4 | 1 | 293 | 1 | 290 | 2.56e-178 | 493 |
| MS.gene013124.t1 | MTR_5g030020 | 34.759 | 187 | 116 | 2 | 94 | 278 | 98 | 280 | 3.28e-26 | 105 |
| MS.gene013124.t1 | MTR_4g104470 | 32.787 | 183 | 108 | 7 | 83 | 259 | 116 | 289 | 5.74e-25 | 101 |
| MS.gene013124.t1 | MTR_1g045510 | 36.872 | 179 | 100 | 7 | 92 | 264 | 113 | 284 | 5.81e-25 | 101 |
| MS.gene013124.t1 | MTR_3g075500 | 27.917 | 240 | 154 | 8 | 33 | 260 | 48 | 280 | 3.65e-24 | 99.4 |
| MS.gene013124.t1 | MTR_3g075500 | 29.442 | 197 | 123 | 7 | 66 | 250 | 78 | 270 | 3.11e-21 | 91.3 |
| MS.gene013124.t1 | MTR_7g106440 | 28.270 | 237 | 140 | 9 | 45 | 259 | 57 | 285 | 3.71e-20 | 89.0 |
| MS.gene013124.t1 | MTR_1g056520 | 30.055 | 183 | 119 | 5 | 84 | 259 | 100 | 280 | 4.76e-20 | 88.6 |
| MS.gene013124.t1 | MTR_1g064230 | 28.000 | 250 | 147 | 8 | 34 | 262 | 35 | 272 | 4.02e-17 | 79.7 |
| MS.gene013124.t1 | MTR_3g027140 | 30.088 | 226 | 143 | 9 | 45 | 259 | 11 | 232 | 6.96e-17 | 78.6 |
| MS.gene013124.t1 | MTR_1g061870 | 27.586 | 174 | 118 | 5 | 92 | 259 | 194 | 365 | 3.20e-14 | 73.2 |
| MS.gene013124.t1 | MTR_1g061870 | 26.437 | 174 | 124 | 3 | 94 | 267 | 105 | 274 | 1.61e-11 | 64.7 |
| MS.gene013124.t1 | MTR_7g102730 | 25.683 | 183 | 124 | 5 | 92 | 264 | 189 | 369 | 4.10e-14 | 72.8 |
| MS.gene013124.t1 | MTR_7g094660 | 28.495 | 186 | 120 | 6 | 94 | 270 | 643 | 824 | 4.95e-14 | 72.8 |
| MS.gene013124.t1 | MTR_1g097440 | 28.649 | 185 | 117 | 6 | 92 | 264 | 209 | 390 | 7.86e-13 | 68.9 |
| MS.gene013124.t1 | MTR_6g040190 | 28.108 | 185 | 118 | 6 | 92 | 264 | 200 | 381 | 2.15e-12 | 67.8 |
| MS.gene013124.t1 | MTR_5g097580 | 26.380 | 163 | 108 | 5 | 91 | 244 | 5 | 164 | 7.55e-12 | 65.9 |
| MS.gene013124.t1 | MTR_5g097580 | 26.380 | 163 | 108 | 5 | 91 | 244 | 5 | 164 | 7.62e-12 | 65.9 |
| MS.gene013124.t1 | MTR_7g013730 | 34.444 | 90 | 55 | 2 | 89 | 177 | 37 | 123 | 2.31e-11 | 63.2 |
| MS.gene013124.t1 | MTR_2g026180 | 25.153 | 163 | 108 | 5 | 93 | 244 | 5 | 164 | 3.95e-11 | 63.5 |
| MS.gene013124.t1 | MTR_4g122650 | 28.571 | 161 | 103 | 7 | 93 | 249 | 89 | 241 | 4.30e-11 | 63.9 |
| MS.gene013124.t1 | MTR_1g019150 | 27.222 | 180 | 116 | 3 | 97 | 264 | 216 | 392 | 5.50e-11 | 63.5 |
| MS.gene013124.t1 | MTR_6g477870 | 36.585 | 82 | 51 | 1 | 92 | 172 | 95 | 176 | 8.61e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013124.t1 | AT4G09040 | 63.043 | 184 | 66 | 2 | 87 | 268 | 89 | 272 | 3.74e-78 | 240 |
| MS.gene013124.t1 | AT4G09040 | 58.000 | 200 | 82 | 2 | 71 | 268 | 13 | 212 | 1.37e-77 | 236 |
| MS.gene013124.t1 | AT2G35410 | 32.016 | 253 | 157 | 3 | 34 | 271 | 28 | 280 | 4.99e-37 | 134 |
| MS.gene013124.t1 | AT1G60000 | 33.702 | 181 | 106 | 6 | 92 | 265 | 85 | 258 | 5.30e-23 | 95.5 |
| MS.gene013124.t1 | AT3G52380 | 31.633 | 196 | 114 | 7 | 75 | 259 | 106 | 292 | 5.41e-23 | 97.1 |
| MS.gene013124.t1 | AT5G50250 | 32.370 | 173 | 105 | 6 | 93 | 259 | 114 | 280 | 3.76e-22 | 94.0 |
| MS.gene013124.t1 | AT4G24770 | 31.609 | 174 | 107 | 6 | 92 | 259 | 150 | 317 | 1.71e-21 | 92.8 |
| MS.gene013124.t1 | AT4G24770 | 31.609 | 174 | 107 | 6 | 92 | 259 | 150 | 317 | 1.71e-21 | 92.8 |
| MS.gene013124.t1 | AT2G37220 | 30.526 | 190 | 107 | 5 | 93 | 260 | 92 | 278 | 5.15e-18 | 82.4 |
| MS.gene013124.t1 | AT3G16380 | 30.055 | 183 | 117 | 4 | 91 | 264 | 201 | 381 | 1.96e-15 | 76.6 |
| MS.gene013124.t1 | AT4G34110 | 28.962 | 183 | 118 | 4 | 92 | 264 | 215 | 395 | 1.20e-14 | 74.3 |
| MS.gene013124.t1 | AT2G36660 | 26.776 | 183 | 122 | 5 | 92 | 264 | 201 | 381 | 4.77e-14 | 72.8 |
| MS.gene013124.t1 | AT2G36660 | 26.901 | 171 | 119 | 4 | 94 | 264 | 114 | 278 | 3.62e-11 | 63.9 |
| MS.gene013124.t1 | AT3G52150 | 29.545 | 176 | 113 | 5 | 93 | 259 | 77 | 250 | 2.27e-12 | 66.2 |
| MS.gene013124.t1 | AT3G52150 | 29.545 | 176 | 113 | 5 | 93 | 259 | 77 | 250 | 2.27e-12 | 66.2 |
| MS.gene013124.t1 | AT2G23350 | 27.411 | 197 | 121 | 5 | 83 | 264 | 216 | 405 | 2.44e-12 | 67.4 |
| MS.gene013124.t1 | AT1G01080 | 26.667 | 195 | 122 | 5 | 80 | 259 | 96 | 284 | 5.99e-12 | 65.5 |
| MS.gene013124.t1 | AT1G71770 | 27.568 | 185 | 122 | 4 | 90 | 264 | 237 | 419 | 1.66e-11 | 65.1 |
| MS.gene013124.t1 | AT1G71770 | 27.568 | 185 | 122 | 4 | 90 | 264 | 237 | 419 | 1.66e-11 | 65.1 |
| MS.gene013124.t1 | AT5G41690 | 28.767 | 219 | 118 | 7 | 65 | 251 | 34 | 246 | 2.81e-11 | 64.3 |
| MS.gene013124.t1 | AT5G41690 | 28.767 | 219 | 118 | 7 | 65 | 251 | 34 | 246 | 2.81e-11 | 64.3 |
| MS.gene013124.t1 | AT5G41690 | 28.767 | 219 | 118 | 7 | 65 | 251 | 34 | 246 | 2.81e-11 | 64.3 |
| MS.gene013124.t1 | AT4G19610 | 27.982 | 218 | 142 | 9 | 52 | 257 | 558 | 772 | 3.03e-11 | 64.3 |
| MS.gene013124.t1 | AT1G22760 | 28.351 | 194 | 123 | 7 | 83 | 264 | 220 | 409 | 5.70e-11 | 63.5 |
Find 0 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTAGAAAATAGTTATTATT+AGG | + | 23852:37880-37899 | MS.gene013124:intron | 15.0% |
| !!! | TTTTTTGTTTGTTTTTGTTT+TGG | + | 23852:37348-37367 | MS.gene013124:intron | 15.0% |
| !! | ACAAACAAGTTATATGTTAT+TGG | - | 23852:38294-38313 | None:intergenic | 20.0% |
| !! | AGATAATTATCTTAGTTACT+TGG | - | 23852:37969-37988 | None:intergenic | 20.0% |
| !! | AGTTATTATTAGGTGAAAAT+TGG | + | 23852:37890-37909 | MS.gene013124:intron | 20.0% |
| !! | ATTATTTAGTATTGTGACAT+TGG | + | 23852:38610-38629 | MS.gene013124:intron | 20.0% |
| !! | CATATTTGATATTTATTACG+CGG | - | 23852:38227-38246 | None:intergenic | 20.0% |
| !! | CCAAATTCAAATTAACAAAT+TGG | - | 23852:38521-38540 | None:intergenic | 20.0% |
| !! | TATTATGTTCAATTCATTTC+AGG | + | 23852:37296-37315 | MS.gene013124:intron | 20.0% |
| !!! | ATATTTCTGCAGAATTTTAT+GGG | + | 23852:38641-38660 | MS.gene013124:intron | 20.0% |
| !!! | CCAATTTGTTAATTTGAATT+TGG | + | 23852:38518-38537 | MS.gene013124:intron | 20.0% |
| ! | ATAAAAAAACCTCAACATCA+AGG | - | 23852:37262-37281 | None:intergenic | 25.0% |
| ! | CAAACATTTCTTATGAAGTA+AGG | + | 23852:38316-38335 | MS.gene013124:CDS | 25.0% |
| ! | CAGATAAACACATCAAATTA+AGG | - | 23852:38170-38189 | None:intergenic | 25.0% |
| ! | GAATATGATACAATTAGAGT+AGG | + | 23852:37928-37947 | MS.gene013124:intron | 25.0% |
| ! | GATTTGATAGAAATGGTTTA+CGG | - | 23852:38002-38021 | None:intergenic | 25.0% |
| ! | GTATAATAAGAACAGAAACA+GGG | + | 23852:37394-37413 | MS.gene013124:CDS | 25.0% |
| ! | TATAATAAGAACAGAAACAG+GGG | + | 23852:37395-37414 | MS.gene013124:CDS | 25.0% |
| ! | TGTATAATAAGAACAGAAAC+AGG | + | 23852:37393-37412 | MS.gene013124:CDS | 25.0% |
| ! | TGTTAGATATAGTTACTAGT+TGG | - | 23852:38026-38045 | None:intergenic | 25.0% |
| ! | TTGTTTGGTTGTGATAATAA+GGG | - | 23852:37069-37088 | None:intergenic | 25.0% |
| !! | AACGTGTGAATTTTATAGAT+AGG | + | 23852:37563-37582 | MS.gene013124:intron | 25.0% |
| !! | AAGAGTTGGTTATTATTACA+TGG | - | 23852:36968-36987 | None:intergenic | 25.0% |
| !! | ACGTGTGAATTTTATAGATA+GGG | + | 23852:37564-37583 | MS.gene013124:intron | 25.0% |
| !! | CGTTCTTTGTTTGAAAAATA+TGG | + | 23852:37230-37249 | MS.gene013124:CDS | 25.0% |
| !! | GATTTGATAGAATTGGTTTA+AGG | + | 23852:37855-37874 | MS.gene013124:intron | 25.0% |
| !! | GTAATTTTCTATGTCAAACT+CGG | + | 23852:37813-37832 | MS.gene013124:intron | 25.0% |
| !! | TATTATTACATGGTGTTTTG+TGG | - | 23852:36958-36977 | None:intergenic | 25.0% |
| !!! | AAATTTTAACCGCAATTTCT+TGG | + | 23852:38571-38590 | MS.gene013124:intron | 25.0% |
| !!! | AATTGTTGTTATTTCGCAAT+AGG | + | 23852:37678-37697 | MS.gene013124:intron | 25.0% |
| !!! | GATATTTCTGCAGAATTTTA+TGG | + | 23852:38640-38659 | MS.gene013124:intron | 25.0% |
| ACAAGACAAAAATCGAAAAG+AGG | - | 23852:37515-37534 | None:intergenic | 30.0% | |
| ACAGAGAGATTTGATAGAAT+TGG | + | 23852:37848-37867 | MS.gene013124:intron | 30.0% | |
| AGCCTAAAAAGGAGAAAATA+CGG | + | 23852:38250-38269 | MS.gene013124:CDS | 30.0% | |
| AGTTGGAGATTTGATAGAAA+TGG | - | 23852:38009-38028 | None:intergenic | 30.0% | |
| ATCAACAATGTTGTAACTTG+CGG | - | 23852:37783-37802 | None:intergenic | 30.0% | |
| ATGGATAAACGAAGAGAATA+AGG | - | 23852:37026-37045 | None:intergenic | 30.0% | |
| ATTGAAAGCTTAAACCCAAA+AGG | - | 23852:37374-37393 | None:intergenic | 30.0% | |
| CAAATATGCTAAGCCTAAAA+AGG | + | 23852:38239-38258 | MS.gene013124:CDS | 30.0% | |
| CAAGACAAAAATCGAAAAGA+GGG | - | 23852:37514-37533 | None:intergenic | 30.0% | |
| CTTAGTTACTTGGATTATGA+AGG | - | 23852:37959-37978 | None:intergenic | 30.0% | |
| GTTGTTTGGTTGTGATAATA+AGG | - | 23852:37070-37089 | None:intergenic | 30.0% | |
| TTTGTGGAAGATAATTGAGT+TGG | - | 23852:36942-36961 | None:intergenic | 30.0% | |
| ! | TGAAATTTTCACACCCATTA+GGG | + | 23852:38055-38074 | MS.gene013124:intron | 30.0% |
| ! | TTGATAGAATTGGTTTAAGG+TGG | + | 23852:37858-37877 | MS.gene013124:intron | 30.0% |
| ! | TTTTTATGTGTCTTCTGTTG+TGG | + | 23852:38117-38136 | MS.gene013124:intron | 30.0% |
| !!! | CTCAAGGAGTTTTTTGATTT+GGG | + | 23852:38348-38367 | MS.gene013124:CDS | 30.0% |
| !!! | TGTTTTTGTTTTGGCCTTTT+GGG | + | 23852:37357-37376 | MS.gene013124:intron | 30.0% |
| !!! | TTGTTTTTGTTTTGGCCTTT+TGG | + | 23852:37356-37375 | MS.gene013124:intron | 30.0% |
| AACGAAGAGAATAAGGATTG+AGG | - | 23852:37019-37038 | None:intergenic | 35.0% | |
| ACGAAGAGAATAAGGATTGA+GGG | - | 23852:37018-37037 | None:intergenic | 35.0% | |
| AGCTTCTTTCTTAGACTTGA+AGG | - | 23852:38448-38467 | None:intergenic | 35.0% | |
| AGTAGAATGAGAGAGTTGTT+TGG | - | 23852:37084-37103 | None:intergenic | 35.0% | |
| AGTTACCTTTCCTTCAAACT+CGG | - | 23852:38484-38503 | None:intergenic | 35.0% | |
| CAAAGAACGAATATCTTCAG+TGG | - | 23852:37219-37238 | None:intergenic | 35.0% | |
| CCAAATCAAAAAACTCCTTG+AGG | - | 23852:38350-38369 | None:intergenic | 35.0% | |
| CTTCTGTTGTGGAATTTACT+TGG | + | 23852:38128-38147 | MS.gene013124:intron | 35.0% | |
| GGAATTTACTTGGCATCTAT+AGG | + | 23852:38138-38157 | MS.gene013124:intron | 35.0% | |
| GTGTTATCTTATCCCCTAAT+GGG | - | 23852:38071-38090 | None:intergenic | 35.0% | |
| TATAGCACACTATAGCATAG+CGG | + | 23852:37742-37761 | MS.gene013124:intron | 35.0% | |
| TGTGTTATCTTATCCCCTAA+TGG | - | 23852:38072-38091 | None:intergenic | 35.0% | |
| TTACTTGGCATCTATAGGAA+GGG | + | 23852:38143-38162 | MS.gene013124:intron | 35.0% | |
| TTATTCTTTGAATGCTGCGT+AGG | + | 23852:38191-38210 | MS.gene013124:intron | 35.0% | |
| TTTACTTGGCATCTATAGGA+AGG | + | 23852:38142-38161 | MS.gene013124:intron | 35.0% | |
| ! | CTGAAATTTTCACACCCATT+AGG | + | 23852:38054-38073 | MS.gene013124:intron | 35.0% |
| ! | GAAATTTTCACACCCATTAG+GGG | + | 23852:38056-38075 | MS.gene013124:intron | 35.0% |
| ! | GCAACTGCTATTTGACAAAA+CGG | - | 23852:37641-37660 | None:intergenic | 35.0% |
| ! | TTCTGCAGAATTTTATGGGA+AGG | + | 23852:38645-38664 | MS.gene013124:intron | 35.0% |
| !! | GAAGATAATTGAGTTGGACA+TGG | - | 23852:36936-36955 | None:intergenic | 35.0% |
| !! | TACTTGGGTTTGTTGTTGTT+CGG | - | 23852:37126-37145 | None:intergenic | 35.0% |
| !!! | CCTCAAGGAGTTTTTTGATT+TGG | + | 23852:38347-38366 | MS.gene013124:CDS | 35.0% |
| !!! | GAGTTTTTTGATTTGGGAAC+TGG | + | 23852:38354-38373 | MS.gene013124:CDS | 35.0% |
| AACATTCTGAGCAAGTAACC+TGG | - | 23852:37183-37202 | None:intergenic | 40.0% | |
| ACCGCAATTTCTTGGAGTTA+CGG | + | 23852:38579-38598 | MS.gene013124:intron | 40.0% | |
| AGTAAGGTCTAAAGACCTCA+AGG | + | 23852:38332-38351 | MS.gene013124:CDS | 40.0% | |
| AGTTGAACAAACCGCTTACT+AGG | - | 23852:38686-38705 | None:intergenic | 40.0% | |
| CGAGCTTACATACATACGAT+TGG | - | 23852:37478-37497 | None:intergenic | 40.0% | |
| CTTGTCAAAGTCGAAAGAGT+TGG | - | 23852:36982-37001 | None:intergenic | 40.0% | |
| GACACAAATCCATAACCAGA+TGG | - | 23852:38426-38445 | None:intergenic | 40.0% | |
| GGGTGTGAAAATTTCAGTGA+TGG | - | 23852:38051-38070 | None:intergenic | 40.0% | |
| GGTTTAGCGTTTGTGGAAAT+GGG | + | 23852:37416-37435 | MS.gene013124:CDS | 40.0% | |
| TACTTGCTCAGAATGTTCCA+TGG | + | 23852:37186-37205 | MS.gene013124:CDS | 40.0% | |
| TCCGTAACTCCAAGAAATTG+CGG | - | 23852:38583-38602 | None:intergenic | 40.0% | |
| TCTTTCATGAGAACCCTAGA+CGG | + | 23852:38400-38419 | MS.gene013124:CDS | 40.0% | |
| TGGAAAAGTCCTTGATGTTG+AGG | + | 23852:37250-37269 | MS.gene013124:CDS | 40.0% | |
| TGGGGTATGAGTATGAGTAA+TGG | - | 23852:37045-37064 | None:intergenic | 40.0% | |
| TGGTTGTGATAATAAGGGCT+GGG | - | 23852:37064-37083 | None:intergenic | 40.0% | |
| TTGGTTGTGATAATAAGGGC+TGG | - | 23852:37065-37084 | None:intergenic | 40.0% | |
| ! | ATTTTATGGGAAGGCCACTA+AGG | + | 23852:38654-38673 | MS.gene013124:CDS | 40.0% |
| ! | GGCCGTATTTTCTCCTTTTT+AGG | - | 23852:38255-38274 | None:intergenic | 40.0% |
| ! | TAGTAAGCGGTTTGTTCAAC+TGG | + | 23852:38685-38704 | MS.gene013124:CDS | 40.0% |
| ! | TTGTTGTTGTTCGGAAGTAG+AGG | - | 23852:37117-37136 | None:intergenic | 40.0% |
| ! | TTTTATGGGAAGGCCACTAA+GGG | + | 23852:38655-38674 | MS.gene013124:CDS | 40.0% |
| !! | TGGTAAAGTTGTTTCTGCAG+AGG | + | 23852:38374-38393 | MS.gene013124:CDS | 40.0% |
| AAACAGGGGTTTAGCGTTTG+TGG | + | 23852:37409-37428 | MS.gene013124:CDS | 45.0% | |
| AAATACGGCCATCAGTGGAA+CGG | + | 23852:38265-38284 | MS.gene013124:CDS | 45.0% | |
| AATGCTGCGTAGGAGTTTGA+CGG | + | 23852:38201-38220 | MS.gene013124:intron | 45.0% | |
| CCTGGTAGTAGAGAACTCTT+CGG | - | 23852:37165-37184 | None:intergenic | 45.0% | |
| GCGTCAAATAGCAGTCATAG+TGG | + | 23852:37716-37735 | MS.gene013124:intron | 45.0% | |
| GGGTTTAGCGTTTGTGGAAA+TGG | + | 23852:37415-37434 | MS.gene013124:CDS | 45.0% | |
| GGTTGTGATAATAAGGGCTG+GGG | - | 23852:37063-37082 | None:intergenic | 45.0% | |
| TCTTCAGTGGTACTTGACCA+TGG | - | 23852:37206-37225 | None:intergenic | 45.0% | |
| TCTTGCCGAGTTTGAAGGAA+AGG | + | 23852:38476-38495 | MS.gene013124:CDS | 45.0% | |
| TTGTTCCTCGGTGGTTACTT+GGG | - | 23852:37141-37160 | None:intergenic | 45.0% | |
| TTTGTTCCTCGGTGGTTACT+TGG | - | 23852:37142-37161 | None:intergenic | 45.0% | |
| ! | GAACTCTTCGGTTTGTTCCT+CGG | - | 23852:37153-37172 | None:intergenic | 45.0% |
| ! | TAAGCGGTTTGTTCAACTGG+CGG | + | 23852:38688-38707 | MS.gene013124:CDS | 45.0% |
| ! | TTCTGAGTTGAGCGTCAATG+AGG | + | 23852:38739-38758 | MS.gene013124:CDS | 45.0% |
| ACAAACCCAAGTAACCACCG+AGG | + | 23852:37133-37152 | MS.gene013124:CDS | 50.0% | |
| AGAGCTGCAGAAGCTTCTTC+AGG | - | 23852:37446-37465 | None:intergenic | 50.0% | |
| CATAACCAGATGGCCGTCTA+GGG | - | 23852:38416-38435 | None:intergenic | 50.0% | |
| CCGAAGAGTTCTCTACTACC+AGG | + | 23852:37162-37181 | MS.gene013124:CDS | 50.0% | |
| GAAGCTCTTGCCGAGTTTGA+AGG | + | 23852:38471-38490 | MS.gene013124:CDS | 50.0% | |
| GGAGAAAATACGGCCATCAG+TGG | + | 23852:38260-38279 | MS.gene013124:CDS | 50.0% | |
| TAAGGGTGGCACCTAGTAAG+CGG | + | 23852:38672-38691 | MS.gene013124:CDS | 50.0% | |
| ! | ATTGGCTTCCGTTCCACTGA+TGG | - | 23852:38276-38295 | None:intergenic | 50.0% |
| ! | TTACTAGGTGCCACCCTTAG+TGG | - | 23852:38671-38690 | None:intergenic | 50.0% |
| CCATAACCAGATGGCCGTCT+AGG | - | 23852:38417-38436 | None:intergenic | 55.0% | |
| CCTAGACGGCCATCTGGTTA+TGG | + | 23852:38414-38433 | MS.gene013124:CDS | 55.0% | |
| TATGGGAAGGCCACTAAGGG+TGG | + | 23852:38658-38677 | MS.gene013124:CDS | 55.0% | |
| ! | CTCTTCGGTTTGTTCCTCGG+TGG | - | 23852:37150-37169 | None:intergenic | 55.0% |
| GAGAACCCTAGACGGCCATC+TGG | + | 23852:38408-38427 | MS.gene013124:CDS | 60.0% | |
| ! | AACTGGCGGAGGAGAGTGCA+GGG | + | 23852:38702-38721 | MS.gene013124:CDS | 60.0% |
| ! | GCGGTTTGTTCAACTGGCGG+AGG | + | 23852:38691-38710 | MS.gene013124:CDS | 60.0% |
| ! | CAACTGGCGGAGGAGAGTGC+AGG | + | 23852:38701-38720 | MS.gene013124:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 23852 | gene | 36906 | 38784 | 36906 | ID=MS.gene013124 |
| 23852 | mRNA | 36906 | 38784 | 36906 | ID=MS.gene013124.t1;Parent=MS.gene013124 |
| 23852 | exon | 36906 | 37271 | 36906 | ID=MS.gene013124.t1.exon1;Parent=MS.gene013124.t1 |
| 23852 | CDS | 36906 | 37271 | 36906 | ID=cds.MS.gene013124.t1;Parent=MS.gene013124.t1 |
| 23852 | exon | 37386 | 37484 | 37386 | ID=MS.gene013124.t1.exon2;Parent=MS.gene013124.t1 |
| 23852 | CDS | 37386 | 37484 | 37386 | ID=cds.MS.gene013124.t1;Parent=MS.gene013124.t1 |
| 23852 | exon | 38213 | 38497 | 38213 | ID=MS.gene013124.t1.exon3;Parent=MS.gene013124.t1 |
| 23852 | CDS | 38213 | 38497 | 38213 | ID=cds.MS.gene013124.t1;Parent=MS.gene013124.t1 |
| 23852 | exon | 38653 | 38784 | 38653 | ID=MS.gene013124.t1.exon4;Parent=MS.gene013124.t1 |
| 23852 | CDS | 38653 | 38784 | 38653 | ID=cds.MS.gene013124.t1;Parent=MS.gene013124.t1 |
| Gene Sequence |
| Protein sequence |
