Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51627.t1 | XP_013458822.1 | 97.4 | 349 | 8 | 1 | 1 | 349 | 1 | 348 | 7.80E-89 | 337.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51627.t1 | Q9SAR5 | 49.0 | 257 | 112 | 7 | 1 | 251 | 1 | 244 | 9.1e-38 | 159.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51627.t1 | A0A072USU9 | 97.4 | 349 | 8 | 1 | 1 | 349 | 1 | 348 | 5.6e-89 | 337.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51627.t1 | MTR_3g009280 | 98.854 | 349 | 3 | 1 | 1 | 349 | 1 | 348 | 0.0 | 702 |
| MS.gene51627.t1 | MTR_3g113040 | 57.676 | 241 | 93 | 5 | 1 | 239 | 1 | 234 | 5.93e-85 | 262 |
| MS.gene51627.t1 | MTR_1g054540 | 53.571 | 196 | 59 | 5 | 30 | 225 | 34 | 197 | 1.15e-51 | 176 |
| MS.gene51627.t1 | MTR_1g054620 | 56.818 | 176 | 58 | 4 | 50 | 225 | 18 | 175 | 3.91e-51 | 174 |
| MS.gene51627.t1 | MTR_1g054620 | 56.818 | 176 | 58 | 4 | 50 | 225 | 18 | 175 | 4.73e-51 | 174 |
| MS.gene51627.t1 | MTR_6g034405 | 44.715 | 246 | 104 | 7 | 1 | 242 | 1 | 218 | 9.16e-51 | 174 |
| MS.gene51627.t1 | MTR_3g114110 | 48.259 | 201 | 76 | 5 | 42 | 242 | 39 | 211 | 8.55e-50 | 171 |
| MS.gene51627.t1 | MTR_6g034405 | 44.444 | 243 | 103 | 7 | 1 | 239 | 1 | 215 | 1.58e-49 | 170 |
| MS.gene51627.t1 | MTR_3g114110 | 47.980 | 198 | 75 | 5 | 42 | 239 | 39 | 208 | 5.53e-49 | 167 |
| MS.gene51627.t1 | MTR_3g114110 | 47.980 | 198 | 75 | 5 | 42 | 239 | 39 | 208 | 1.45e-48 | 167 |
| MS.gene51627.t1 | MTR_1g054550 | 52.273 | 176 | 47 | 5 | 50 | 225 | 18 | 156 | 1.85e-42 | 147 |
| MS.gene51627.t1 | MTR_3g115660 | 60.577 | 104 | 35 | 1 | 136 | 239 | 1 | 98 | 4.58e-35 | 124 |
| MS.gene51627.t1 | MTR_1g054600 | 51.938 | 129 | 44 | 4 | 50 | 178 | 86 | 196 | 4.21e-29 | 112 |
| MS.gene51627.t1 | MTR_4g116930 | 39.552 | 134 | 34 | 2 | 179 | 312 | 1 | 87 | 1.86e-17 | 82.4 |
| MS.gene51627.t1 | MTR_5g043640 | 36.879 | 141 | 82 | 1 | 203 | 343 | 75 | 208 | 2.47e-14 | 72.4 |
| MS.gene51627.t1 | MTR_1g476030 | 33.588 | 131 | 84 | 2 | 222 | 349 | 4 | 134 | 3.59e-13 | 70.5 |
| MS.gene51627.t1 | MTR_6g027840 | 37.000 | 100 | 62 | 1 | 245 | 343 | 230 | 329 | 4.25e-12 | 67.4 |
| MS.gene51627.t1 | MTR_1g062770 | 37.705 | 122 | 66 | 4 | 231 | 343 | 43 | 163 | 4.44e-12 | 65.1 |
| MS.gene51627.t1 | MTR_4g075710 | 39.316 | 117 | 68 | 2 | 219 | 332 | 116 | 232 | 2.77e-11 | 64.7 |
| MS.gene51627.t1 | MTR_1g089180 | 37.113 | 97 | 60 | 1 | 233 | 328 | 348 | 444 | 7.05e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51627.t1 | AT2G17390 | 64.607 | 356 | 107 | 5 | 1 | 349 | 1 | 344 | 4.10e-153 | 434 |
| MS.gene51627.t1 | AT4G35450 | 64.672 | 351 | 113 | 6 | 1 | 349 | 1 | 342 | 7.91e-149 | 423 |
| MS.gene51627.t1 | AT4G35450 | 64.672 | 351 | 113 | 6 | 1 | 349 | 1 | 342 | 7.91e-149 | 423 |
| MS.gene51627.t1 | AT4G35450 | 64.672 | 351 | 113 | 6 | 1 | 349 | 1 | 342 | 7.91e-149 | 423 |
| MS.gene51627.t1 | AT4G35450 | 63.510 | 359 | 112 | 7 | 1 | 349 | 1 | 350 | 2.85e-146 | 417 |
| MS.gene51627.t1 | AT4G35450 | 67.961 | 309 | 93 | 3 | 41 | 349 | 2 | 304 | 7.99e-146 | 414 |
| MS.gene51627.t1 | AT2G03430 | 39.000 | 100 | 61 | 0 | 229 | 328 | 87 | 186 | 3.51e-14 | 71.6 |
| MS.gene51627.t1 | AT3G23280 | 34.400 | 125 | 79 | 2 | 228 | 349 | 10 | 134 | 1.09e-13 | 72.4 |
| MS.gene51627.t1 | AT3G23280 | 34.400 | 125 | 79 | 2 | 228 | 349 | 10 | 134 | 1.19e-13 | 72.0 |
| MS.gene51627.t1 | AT5G53470 | 34.615 | 104 | 68 | 0 | 229 | 332 | 222 | 325 | 2.77e-13 | 70.5 |
| MS.gene51627.t1 | AT5G12320 | 35.354 | 99 | 64 | 0 | 233 | 331 | 19 | 117 | 5.28e-12 | 63.5 |
| MS.gene51627.t1 | AT4G27780 | 33.654 | 104 | 69 | 0 | 229 | 332 | 237 | 340 | 8.55e-12 | 65.9 |
| MS.gene51627.t1 | AT2G47450 | 40.351 | 114 | 66 | 2 | 220 | 332 | 123 | 235 | 1.65e-11 | 65.1 |
Find 89 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTCAAGCTGAACTTTAT+TGG | 0.122980 | 3.4:-4264020 | None:intergenic |
| GCTGCTTCTTCTGAAAATTC+TGG | 0.165755 | 3.4:+4264310 | MS.gene51627:CDS |
| TTGCAGTACTCTGCAAAATA+TGG | 0.286124 | 3.4:+4266252 | MS.gene51627:intron |
| CCCACATCTTCTGTTTCATC+TGG | 0.296289 | 3.4:-4264334 | None:intergenic |
| TTTAATTTCGCAACATCTAT+AGG | 0.306488 | 3.4:-4266286 | None:intergenic |
| TCAGCCATGGTCATAAAATT+AGG | 0.317600 | 3.4:-4263848 | None:intergenic |
| CTTCATTATGCAGCAGGTTA+TGG | 0.341988 | 3.4:+4266055 | MS.gene51627:CDS |
| TCTCAAAAGGATATTCCTTC+TGG | 0.350480 | 3.4:+4262154 | MS.gene51627:CDS |
| TATGACCATGGCTGAGCGCC+TGG | 0.371236 | 3.4:+4263856 | MS.gene51627:CDS |
| TGGAAAACCGGTCCCAGGTC+CGG | 0.375249 | 3.4:-4262966 | None:intergenic |
| AGAGAGAATGGCACGCATAA+AGG | 0.386835 | 3.4:+4264039 | MS.gene51627:CDS |
| CTCATTGCTGAGAAATCAAA+AGG | 0.392741 | 3.4:-4263013 | None:intergenic |
| CTGCTTCTTCTGAAAATTCT+GGG | 0.395319 | 3.4:+4264311 | MS.gene51627:CDS |
| TCAGCCAATTCCTTGATACT+TGG | 0.405646 | 3.4:-4263683 | None:intergenic |
| GGATCCAAGTATCAAGGAAT+TGG | 0.418761 | 3.4:+4263679 | MS.gene51627:intron |
| TACTGCTGATTATCAAAGTT+AGG | 0.425274 | 3.4:-4263794 | None:intergenic |
| CTGAACTTTATTGGACGGAT+TGG | 0.428989 | 3.4:-4264011 | None:intergenic |
| ACCAGTCCCAGGTGGAAAAC+CGG | 0.440893 | 3.4:-4262978 | None:intergenic |
| TTGAAAGCTGCGCTAGCCTC+TGG | 0.443610 | 3.4:+4265384 | MS.gene51627:CDS |
| AGGTCCGGGAGTTGCGTTCG+AGG | 0.459739 | 3.4:-4262951 | None:intergenic |
| GCGCAAGCTCTCCTTGAGGC+TGG | 0.462394 | 3.4:+4265992 | MS.gene51627:CDS |
| GGAAAACCGGTCCCAGGTCC+GGG | 0.463114 | 3.4:-4262965 | None:intergenic |
| TCGAACGCAACTCCCGGACC+TGG | 0.465039 | 3.4:+4262953 | MS.gene51627:CDS |
| ATGGGCATTCCTCCAACCTC+TGG | 0.465285 | 3.4:+4264280 | MS.gene51627:CDS |
| TCTAAAATATGTTTCAAAGA+TGG | 0.467672 | 3.4:-4264067 | None:intergenic |
| TGGAGCAAAAGTAGATGCTT+TGG | 0.468103 | 3.4:+4266012 | MS.gene51627:CDS |
| GAAGAAGTTGGGACTAGCCA+TGG | 0.471435 | 3.4:+4264261 | MS.gene51627:CDS |
| GTATCTTTCATCCATGCAAC+AGG | 0.477789 | 3.4:+4263814 | MS.gene51627:CDS |
| GAGAAATCAAAAGGGTTGGC+TGG | 0.479871 | 3.4:-4263004 | None:intergenic |
| CATGGCTTCCAATTCTCAAA+AGG | 0.488909 | 3.4:+4262141 | None:intergenic |
| AAACATCTTTCTCAAGAAGC+TGG | 0.492614 | 3.4:-4266327 | None:intergenic |
| GCTAGCCTCTGGTGCTGATA+AGG | 0.495452 | 3.4:+4265395 | MS.gene51627:CDS |
| ACAGCTCTTCATTATGCAGC+AGG | 0.511661 | 3.4:+4266049 | MS.gene51627:CDS |
| ACTGCTGATTATCAAAGTTA+GGG | 0.515114 | 3.4:-4263793 | None:intergenic |
| AGTTCAGCTTGAAGAGAGAA+TGG | 0.515247 | 3.4:+4264027 | MS.gene51627:CDS |
| ATTATGCAGCAGGTTATGGC+AGG | 0.522371 | 3.4:+4266059 | MS.gene51627:CDS |
| TTCATCCATGCAACAGGTCA+TGG | 0.523490 | 3.4:+4263820 | MS.gene51627:CDS |
| GCAGCTGCATCTCCAGAGGT+TGG | 0.525843 | 3.4:-4264292 | None:intergenic |
| GCAACTCCCGGACCTGGGAC+CGG | 0.525973 | 3.4:+4262959 | MS.gene51627:CDS |
| ATTGGTAAAACTTTCAAGCA+TGG | 0.527566 | 3.4:-4263993 | None:intergenic |
| GTCACAGGATCCAAGTATCA+AGG | 0.533298 | 3.4:+4263673 | MS.gene51627:intron |
| TTTGATTTCTCAGCAATGAG+TGG | 0.534737 | 3.4:+4263016 | MS.gene51627:CDS |
| TGCTGAGAAATCAAAAGGGT+TGG | 0.535067 | 3.4:-4263008 | None:intergenic |
| CCAGGTGGAAAACCGGTCCC+AGG | 0.535701 | 3.4:-4262971 | None:intergenic |
| GTGGCCTTGCTCCTTGAAAA+CGG | 0.539036 | 3.4:+4266091 | MS.gene51627:CDS |
| CCTGGGTAATGCATTGATGC+AGG | 0.543657 | 3.4:+4263874 | MS.gene51627:CDS |
| CGAACGCAACTCCCGGACCT+GGG | 0.544955 | 3.4:+4262954 | MS.gene51627:CDS |
| TCAAGCTGAACTTTATTGGA+CGG | 0.545387 | 3.4:-4264016 | None:intergenic |
| AGATCCATCATTCAATCAGA+TGG | 0.548584 | 3.4:+4263718 | MS.gene51627:CDS |
| CAGCTTCAGAAAACTTTGCA+TGG | 0.549622 | 3.4:+4263746 | MS.gene51627:CDS |
| ACATCCTCGAACGCAACTCC+CGG | 0.550672 | 3.4:+4262947 | MS.gene51627:CDS |
| ATGACCATGGCTGAGCGCCT+GGG | 0.553159 | 3.4:+4263857 | MS.gene51627:CDS |
| GCCAGATGAAACAGAAGATG+TGG | 0.557340 | 3.4:+4264333 | MS.gene51627:CDS |
| TTTGCATGGAGGAGCACCAC+AGG | 0.559317 | 3.4:+4263760 | MS.gene51627:CDS |
| AGTACTCTGCAAAATATGGA+TGG | 0.567263 | 3.4:+4266256 | MS.gene51627:intron |
| ATTTGCCATGACCTGTTGCA+TGG | 0.569040 | 3.4:-4263825 | None:intergenic |
| GTTCATCATACTGCTAGTGT+TGG | 0.576940 | 3.4:+4264376 | MS.gene51627:CDS |
| AAGAAGTTGGGACTAGCCAT+GGG | 0.580948 | 3.4:+4264262 | MS.gene51627:CDS |
| GCTGCATCTCCAGAGGTTGG+AGG | 0.582935 | 3.4:-4264289 | None:intergenic |
| CAAGCATGGAAGACATCGAT+GGG | 0.587730 | 3.4:-4263979 | None:intergenic |
| ATAAACCTCATCATTACAGC+AGG | 0.589232 | 3.4:-4264109 | None:intergenic |
| TCAGCCATCTGATTGAATGA+TGG | 0.589706 | 3.4:-4263722 | None:intergenic |
| TAAGGATGAAGAAGATTCAG+AGG | 0.591403 | 3.4:+4265413 | MS.gene51627:CDS |
| TTGGCTGGAAAACCAGTCCC+AGG | 0.592571 | 3.4:-4262989 | None:intergenic |
| TCAAGCATGGAAGACATCGA+TGG | 0.593586 | 3.4:-4263980 | None:intergenic |
| GTACTCTGCAAAATATGGAT+GGG | 0.595986 | 3.4:+4266257 | MS.gene51627:intron |
| AGAAGCAGCTGCATCTCCAG+AGG | 0.600724 | 3.4:-4264296 | None:intergenic |
| TGCAGCAGGTTATGGCAGGA+AGG | 0.601460 | 3.4:+4266063 | MS.gene51627:CDS |
| AAGGATGAAGAAGATTCAGA+GGG | 0.609631 | 3.4:+4265414 | MS.gene51627:CDS |
| ATTACCCAGGCGCTCAGCCA+TGG | 0.617162 | 3.4:-4263861 | None:intergenic |
| TTCATCCTTATCAGCACCAG+AGG | 0.620315 | 3.4:-4265400 | None:intergenic |
| TGCTAGTGTTGGTGACATTG+AGG | 0.628525 | 3.4:+4264387 | MS.gene51627:CDS |
| TCATTGCTGAGAAATCAAAA+GGG | 0.629369 | 3.4:-4263012 | None:intergenic |
| CATGGAGGAGCACCACAGGA+TGG | 0.634179 | 3.4:+4263764 | MS.gene51627:CDS |
| AGACGAGAAAGCTGGTTCAG+CGG | 0.641290 | 3.4:+4262901 | MS.gene51627:intron |
| TAGATACTGGAATGATGAGG+AGG | 0.645865 | 3.4:+4264234 | MS.gene51627:intron |
| CCTGCATCAATGCATTACCC+AGG | 0.649558 | 3.4:-4263874 | None:intergenic |
| CCAGATGAAACAGAAGATGT+GGG | 0.652505 | 3.4:+4264334 | MS.gene51627:CDS |
| AGAGGTTGGAGGAATGCCCA+TGG | 0.656046 | 3.4:-4264278 | None:intergenic |
| ATCTAGATACTGGAATGATG+AGG | 0.659169 | 3.4:+4264231 | MS.gene51627:intron |
| GGAGGAGCACCACAGGATGG+TGG | 0.665535 | 3.4:+4263767 | MS.gene51627:CDS |
| CATCTTTCTCAAGAAGCTGG+AGG | 0.671030 | 3.4:-4266324 | None:intergenic |
| TTATGGCAGGAAGGAATGTG+TGG | 0.674267 | 3.4:+4266072 | MS.gene51627:CDS |
| TTAGGGAGACCACCATCCTG+TGG | 0.684695 | 3.4:-4263776 | None:intergenic |
| GCTGGAAAACCAGTCCCAGG+TGG | 0.687890 | 3.4:-4262986 | None:intergenic |
| GTGTGCGCAAGCTCTCCTTG+AGG | 0.688818 | 3.4:+4265988 | MS.gene51627:CDS |
| GCGGTCCTGCTGTAATGATG+AGG | 0.692207 | 3.4:+4264104 | MS.gene51627:CDS |
| CTTCAGAAAACTTTGCATGG+AGG | 0.695368 | 3.4:+4263749 | MS.gene51627:CDS |
| TTAGATGAGATAGAGAATGG+CGG | 0.730427 | 3.4:+4264085 | MS.gene51627:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAGAAAATCATATTTTA+TGG | + | chr3.4:4264144-4264163 | MS.gene51627:intron | 10.0% |
| !!! | ATGATTTTCTTTTTTAAAAA+TGG | - | chr3.4:4264138-4264157 | None:intergenic | 10.0% |
| !! | ATAAATAAATAATACAATGG+TGG | - | chr3.4:4265308-4265327 | None:intergenic | 15.0% |
| !! | ATCTTTGTAATAATCATTTA+AGG | + | chr3.4:4263447-4263466 | MS.gene51627:intron | 15.0% |
| !! | CCATTGTATTATTTATTTAT+CGG | + | chr3.4:4265308-4265327 | MS.gene51627:intron | 15.0% |
| !!! | AAAATCATATTTTATGGTTT+TGG | + | chr3.4:4264150-4264169 | MS.gene51627:intron | 15.0% |
| !!! | AGTTTGATTTTTTTTTTTTG+TGG | + | chr3.4:4262330-4262349 | MS.gene51627:intron | 15.0% |
| !!! | TAGTTAAATAGTTTTATACA+TGG | - | chr3.4:4263621-4263640 | None:intergenic | 15.0% |
| !! | AATACTATTATGATCCAAAT+TGG | - | chr3.4:4263412-4263431 | None:intergenic | 20.0% |
| !! | ACATAATTGAATATAATCAC+AGG | + | chr3.4:4262427-4262446 | MS.gene51627:intron | 20.0% |
| !! | AGTATTTACACTAATCAATT+AGG | + | chr3.4:4265359-4265378 | MS.gene51627:intron | 20.0% |
| !! | ATACATTCTTATCTAACAAT+CGG | - | chr3.4:4263941-4263960 | None:intergenic | 20.0% |
| !! | ATTACTATAATACTTATGCA+TGG | - | chr3.4:4264875-4264894 | None:intergenic | 20.0% |
| !! | ATTTACATAACAAATTATGG+TGG | - | chr3.4:4264181-4264200 | None:intergenic | 20.0% |
| !! | ATTTGTATAGACAATACAAA+GGG | + | chr3.4:4262679-4262698 | MS.gene51627:intron | 20.0% |
| !! | CATATTAGTAAAAATCACAT+AGG | - | chr3.4:4262647-4262666 | None:intergenic | 20.0% |
| !! | CCAATTTACATAACAAATTA+TGG | - | chr3.4:4264184-4264203 | None:intergenic | 20.0% |
| !! | CCGATAAATAAATAATACAA+TGG | - | chr3.4:4265311-4265330 | None:intergenic | 20.0% |
| !! | GAATTTAAAGAGATGAAAAT+AGG | + | chr3.4:4264543-4264562 | MS.gene51627:intron | 20.0% |
| !! | GTATTTACACTAATCAATTA+GGG | + | chr3.4:4265360-4265379 | MS.gene51627:intron | 20.0% |
| !! | TACATCAATAACAATTAACA+GGG | - | chr3.4:4263124-4263143 | None:intergenic | 20.0% |
| !! | TATAAAACTATTTAACTACG+TGG | + | chr3.4:4263623-4263642 | MS.gene51627:intron | 20.0% |
| !! | TATTTGTATAGACAATACAA+AGG | + | chr3.4:4262678-4262697 | MS.gene51627:intron | 20.0% |
| !! | TGTACAAAAAAAACATAATC+AGG | - | chr3.4:4262288-4262307 | None:intergenic | 20.0% |
| !! | TGTTTATTTGTTTAATTCGA+AGG | + | chr3.4:4265192-4265211 | MS.gene51627:intron | 20.0% |
| !! | TTACATCAATAACAATTAAC+AGG | - | chr3.4:4263125-4263144 | None:intergenic | 20.0% |
| !!! | AAACTGATATATTTTTCGAA+AGG | - | chr3.4:4264723-4264742 | None:intergenic | 20.0% |
| !!! | AGAATTTATGTATTTGTTGT+TGG | + | chr3.4:4265534-4265553 | MS.gene51627:intron | 20.0% |
| !!! | AGAATTTTATTTTTCTCAAG+AGG | - | chr3.4:4264796-4264815 | None:intergenic | 20.0% |
| !!! | ATGAAACTTTTTTGAATAGA+AGG | + | chr3.4:4264491-4264510 | MS.gene51627:intron | 20.0% |
| !!! | ATTGATTTTTTGTTCACTAT+CGG | + | chr3.4:4262228-4262247 | MS.gene51627:intron | 20.0% |
| !!! | CAAAATTAGTAAAGTGTTAT+TGG | - | chr3.4:4262778-4262797 | None:intergenic | 20.0% |
| !!! | CCATAATTTGTTATGTAAAT+TGG | + | chr3.4:4264181-4264200 | MS.gene51627:intron | 20.0% |
| !!! | CTATGTGATTTTTACTAATA+TGG | + | chr3.4:4262645-4262664 | MS.gene51627:intron | 20.0% |
| !!! | TACATAAATTCTAAGAAACA+AGG | - | chr3.4:4265526-4265545 | None:intergenic | 20.0% |
| !!! | TCTAAAATATGTTTCAAAGA+TGG | - | chr3.4:4264070-4264089 | None:intergenic | 20.0% |
| !!! | TTGTTTAAGGTAATATCAAA+AGG | + | chr3.4:4264622-4264641 | MS.gene51627:intron | 20.0% |
| !!! | TTTATTGAAGAGTTTAAGTT+AGG | + | chr3.4:4263487-4263506 | MS.gene51627:intron | 20.0% |
| ! | AAAATGAAAAGAGAAAGAGT+CGG | - | chr3.4:4263553-4263572 | None:intergenic | 25.0% |
| ! | AAAGCTTATAGAATGATAGT+TGG | - | chr3.4:4264680-4264699 | None:intergenic | 25.0% |
| ! | AATTATAGATAGATACCAGA+AGG | - | chr3.4:4262172-4262191 | None:intergenic | 25.0% |
| ! | TTAAAATGTCAATATGTCAC+AGG | + | chr3.4:4263658-4263677 | MS.gene51627:intron | 25.0% |
| ! | TTAATCCATACATTGGAATT+TGG | - | chr3.4:4265940-4265959 | None:intergenic | 25.0% |
| ! | TTACCTATAAAACACAAACA+TGG | + | chr3.4:4262358-4262377 | MS.gene51627:intron | 25.0% |
| !! | AAATCCTAATTTTATGACCA+TGG | + | chr3.4:4263844-4263863 | MS.gene51627:CDS | 25.0% |
| !! | AACGTTGTGTTCTAATTTTA+GGG | - | chr3.4:4264957-4264976 | None:intergenic | 25.0% |
| !! | AATTCTTTTCATCTAGATAC+TGG | + | chr3.4:4264221-4264240 | MS.gene51627:intron | 25.0% |
| !! | ACTATCATTCTATAAGCTTT+TGG | + | chr3.4:4264680-4264699 | MS.gene51627:intron | 25.0% |
| !! | ATTTTAGATGAGATAGAGAA+TGG | + | chr3.4:4264082-4264101 | MS.gene51627:CDS | 25.0% |
| !! | CTATCATTCTATAAGCTTTT+GGG | + | chr3.4:4264681-4264700 | MS.gene51627:intron | 25.0% |
| !! | TAACGTTGTGTTCTAATTTT+AGG | - | chr3.4:4264958-4264977 | None:intergenic | 25.0% |
| !! | TTTAATTTCGCAACATCTAT+AGG | - | chr3.4:4266289-4266308 | None:intergenic | 25.0% |
| !!! | AAATTCTGAACTTTTTTCAG+AGG | + | chr3.4:4263277-4263296 | MS.gene51627:intron | 25.0% |
| !!! | ATGTGCTTTAATTTTACTCT+TGG | + | chr3.4:4262868-4262887 | MS.gene51627:intron | 25.0% |
| !!! | CCAGTAAAACACAATTTTTT+GGG | + | chr3.4:4265088-4265107 | MS.gene51627:intron | 25.0% |
| !!! | GCATATTTTAATCCATACAT+TGG | - | chr3.4:4265947-4265966 | None:intergenic | 25.0% |
| !!! | TTTTCATTTTTCACTCACTA+GGG | + | chr3.4:4263563-4263582 | MS.gene51627:intron | 25.0% |
| AAATGAAAAGAGAAAGAGTC+GGG | - | chr3.4:4263552-4263571 | None:intergenic | 30.0% | |
| AACAAGATGTAGGAAGAAAT+TGG | - | chr3.4:4266176-4266195 | None:intergenic | 30.0% | |
| AACACACTTATCATGATATC+TGG | - | chr3.4:4262539-4262558 | None:intergenic | 30.0% | |
| ACAAATTTGTAGTTGTGCTT+GGG | + | chr3.4:4264467-4264486 | MS.gene51627:intron | 30.0% | |
| AGACACTTATCCTTTACTTA+GGG | + | chr3.4:4262711-4262730 | MS.gene51627:intron | 30.0% | |
| AGCAAACCAATACTAAAGAA+AGG | - | chr3.4:4265246-4265265 | None:intergenic | 30.0% | |
| AGTTTATTGAAGCAAGTTCT+AGG | + | chr3.4:4264981-4265000 | MS.gene51627:intron | 30.0% | |
| ATTGCTCCTTTCTTTAGTAT+TGG | + | chr3.4:4265237-4265256 | MS.gene51627:intron | 30.0% | |
| ATTGGTAAAACTTTCAAGCA+TGG | - | chr3.4:4263996-4264015 | None:intergenic | 30.0% | |
| GAAGAAAATCACAATGCTAT+AGG | - | chr3.4:4265637-4265656 | None:intergenic | 30.0% | |
| GGAATATAAGTCAATTGAGT+AGG | - | chr3.4:4265028-4265047 | None:intergenic | 30.0% | |
| GTAATTAATTGTCTCACAGT+TGG | + | chr3.4:4264574-4264593 | MS.gene51627:intron | 30.0% | |
| GTTTCTGCATGAATTGTTTA+AGG | + | chr3.4:4264609-4264628 | MS.gene51627:intron | 30.0% | |
| TAAGTTAGGTGAAGAATTTG+AGG | + | chr3.4:4263501-4263520 | MS.gene51627:intron | 30.0% | |
| TAGAATATTAGATTCTAGCC+TGG | + | chr3.4:4265790-4265809 | MS.gene51627:intron | 30.0% | |
| TAGACACTTATCCTTTACTT+AGG | + | chr3.4:4262710-4262729 | MS.gene51627:intron | 30.0% | |
| TCATTGCTGAGAAATCAAAA+GGG | - | chr3.4:4263015-4263034 | None:intergenic | 30.0% | |
| TTATAGTAATGTAGTCCACT+AGG | + | chr3.4:4264885-4264904 | MS.gene51627:intron | 30.0% | |
| TTCTTCCAAATTCCAATGTA+TGG | + | chr3.4:4265932-4265951 | MS.gene51627:intron | 30.0% | |
| ! | ACTGCTGATTATCAAAGTTA+GGG | - | chr3.4:4263796-4263815 | None:intergenic | 30.0% |
| ! | AGTACTTTCATTTAGAACCA+TGG | + | chr3.4:4265559-4265578 | MS.gene51627:intron | 30.0% |
| ! | ATGGAATCATTTTCAAACCA+AGG | - | chr3.4:4264856-4264875 | None:intergenic | 30.0% |
| ! | CCCAAAAAATTGTGTTTTAC+TGG | - | chr3.4:4265091-4265110 | None:intergenic | 30.0% |
| ! | GAAGTGTGTTATTGTTGTAT+TGG | + | chr3.4:4262504-4262523 | MS.gene51627:intron | 30.0% |
| ! | TAAGTGTGTTATTGTCATGT+TGG | + | chr3.4:4262549-4262568 | MS.gene51627:intron | 30.0% |
| ! | TACTGCTGATTATCAAAGTT+AGG | - | chr3.4:4263797-4263816 | None:intergenic | 30.0% |
| ! | TGCTATTTGCATTATATGTG+TGG | + | chr3.4:4263072-4263091 | MS.gene51627:intron | 30.0% |
| ! | TGTCCATGTTTGTGTTTTAT+AGG | - | chr3.4:4262364-4262383 | None:intergenic | 30.0% |
| ! | TTACATTTTGCTTGTGGTTA+CGG | + | chr3.4:4265447-4265466 | MS.gene51627:CDS | 30.0% |
| !! | ACATGCATGTTTTTATAAGC+TGG | + | chr3.4:4263174-4263193 | MS.gene51627:intron | 30.0% |
| !! | AGGAATATCCTTTTGAGAAT+TGG | - | chr3.4:4262152-4262171 | None:intergenic | 30.0% |
| !! | CTAATTTTGCTGTAGTCTTT+TGG | + | chr3.4:4262789-4262808 | MS.gene51627:intron | 30.0% |
| !! | CTTTTCATTTTTCACTCACT+AGG | + | chr3.4:4263562-4263581 | MS.gene51627:intron | 30.0% |
| !! | GAATTTTGACGATTCTAGTT+TGG | + | chr3.4:4265909-4265928 | MS.gene51627:intron | 30.0% |
| !!! | ATTTTTTTAGACGAGAAAGC+TGG | + | chr3.4:4262893-4262912 | MS.gene51627:intron | 30.0% |
| !!! | CATATTGACTTTTCGCAATA+TGG | + | chr3.4:4264415-4264434 | MS.gene51627:intron | 30.0% |
| !!! | GCCAGTAAAACACAATTTTT+TGG | + | chr3.4:4265087-4265106 | MS.gene51627:intron | 30.0% |
| !!! | TCTGGGAATAGGTTTTATTA+GGG | + | chr3.4:4263252-4263271 | MS.gene51627:intron | 30.0% |
| !!! | TTCTGGGAATAGGTTTTATT+AGG | + | chr3.4:4263251-4263270 | MS.gene51627:intron | 30.0% |
| AAAATCGCATAGGAAGATAC+TGG | - | chr3.4:4262612-4262631 | None:intergenic | 35.0% | |
| AAACATCTTTCTCAAGAAGC+TGG | - | chr3.4:4266330-4266349 | None:intergenic | 35.0% | |
| AAATTGGCAGCAACTACAAA+AGG | - | chr3.4:4263396-4263415 | None:intergenic | 35.0% | |
| AAGGATGAAGAAGATTCAGA+GGG | + | chr3.4:4265414-4265433 | MS.gene51627:CDS | 35.0% | |
| ACTTCCCTGAGTAACTTATA+AGG | + | chr3.4:4265052-4265071 | MS.gene51627:intron | 35.0% | |
| AGATCCATCATTCAATCAGA+TGG | + | chr3.4:4263718-4263737 | MS.gene51627:CDS | 35.0% | |
| AGCTTTCCATATCATGATAG+TGG | + | chr3.4:4263364-4263383 | MS.gene51627:intron | 35.0% | |
| AGTACTCTGCAAAATATGGA+TGG | + | chr3.4:4266256-4266275 | MS.gene51627:intron | 35.0% | |
| ATAAACCTCATCATTACAGC+AGG | - | chr3.4:4264112-4264131 | None:intergenic | 35.0% | |
| ATACCACTACAACAAGATGT+AGG | - | chr3.4:4266186-4266205 | None:intergenic | 35.0% | |
| ATATGCTCCTGATATATTCC+AGG | + | chr3.4:4265961-4265980 | MS.gene51627:intron | 35.0% | |
| ATCCTCCTTATAAGTTACTC+AGG | - | chr3.4:4265060-4265079 | None:intergenic | 35.0% | |
| ATCTAGATACTGGAATGATG+AGG | + | chr3.4:4264231-4264250 | MS.gene51627:intron | 35.0% | |
| ATGTATATGCTGTCTATCAC+AGG | + | chr3.4:4263955-4263974 | MS.gene51627:intron | 35.0% | |
| CTCATTGCTGAGAAATCAAA+AGG | - | chr3.4:4263016-4263035 | None:intergenic | 35.0% | |
| CTCTTCAAGCTGAACTTTAT+TGG | - | chr3.4:4264023-4264042 | None:intergenic | 35.0% | |
| CTGATTCCACTATCATGATA+TGG | - | chr3.4:4263373-4263392 | None:intergenic | 35.0% | |
| GACAAATTTGTAGTTGTGCT+TGG | + | chr3.4:4264466-4264485 | MS.gene51627:intron | 35.0% | |
| GACACTAGTAAAAATCGCAT+AGG | - | chr3.4:4262622-4262641 | None:intergenic | 35.0% | |
| GCCATATATATACAAGAACC+AGG | - | chr3.4:4265811-4265830 | None:intergenic | 35.0% | |
| GTAATATATGTAACACCGAC+AGG | - | chr3.4:4262583-4262602 | None:intergenic | 35.0% | |
| GTACTCTGCAAAATATGGAT+GGG | + | chr3.4:4266257-4266276 | MS.gene51627:intron | 35.0% | |
| TAAGGATGAAGAAGATTCAG+AGG | + | chr3.4:4265413-4265432 | MS.gene51627:CDS | 35.0% | |
| TCAAGCTGAACTTTATTGGA+CGG | - | chr3.4:4264019-4264038 | None:intergenic | 35.0% | |
| TCAGCCATGGTCATAAAATT+AGG | - | chr3.4:4263851-4263870 | None:intergenic | 35.0% | |
| TCCTCCTTATAAGTTACTCA+GGG | - | chr3.4:4265059-4265078 | None:intergenic | 35.0% | |
| TCTCAAAAGGATATTCCTTC+TGG | + | chr3.4:4262154-4262173 | MS.gene51627:CDS | 35.0% | |
| TGAACTAAACCTAACCACAT+CGG | - | chr3.4:4264519-4264538 | None:intergenic | 35.0% | |
| TGTCATCGTACAATGATTCT+GGG | + | chr3.4:4263235-4263254 | MS.gene51627:intron | 35.0% | |
| TTAGATGAGATAGAGAATGG+CGG | + | chr3.4:4264085-4264104 | MS.gene51627:CDS | 35.0% | |
| TTCTATTCCAAACAACTCCT+TGG | + | chr3.4:4264836-4264855 | MS.gene51627:intron | 35.0% | |
| TTGCAGTACTCTGCAAAATA+TGG | + | chr3.4:4266252-4266271 | MS.gene51627:intron | 35.0% | |
| TTTCAAACCAAGGAGTTGTT+TGG | - | chr3.4:4264846-4264865 | None:intergenic | 35.0% | |
| ! | ACTGCTTTACATTTTGCTTG+TGG | + | chr3.4:4265441-4265460 | MS.gene51627:CDS | 35.0% |
| ! | CATCTTGTTGTAGTGGTATT+TGG | + | chr3.4:4266187-4266206 | MS.gene51627:intron | 35.0% |
| ! | CTGCTTCTTCTGAAAATTCT+GGG | + | chr3.4:4264311-4264330 | MS.gene51627:CDS | 35.0% |
| ! | GCCTGGTTCTTGTATATATA+TGG | + | chr3.4:4265807-4265826 | MS.gene51627:intron | 35.0% |
| ! | TTTGATTTCTCAGCAATGAG+TGG | + | chr3.4:4263016-4263035 | MS.gene51627:CDS | 35.0% |
| ! | TTTTGTAGTTGCTGCCAATT+TGG | + | chr3.4:4263395-4263414 | MS.gene51627:intron | 35.0% |
| !!! | GCGGGTGTTTTATTTCTTTA+AGG | - | chr3.4:4264917-4264936 | None:intergenic | 35.0% |
| !!! | TATTGTCGTCTTGGTTTTGT+TGG | + | chr3.4:4262453-4262472 | MS.gene51627:intron | 35.0% |
| AAGCATGCAACCTTTACACA+AGG | - | chr3.4:4265170-4265189 | None:intergenic | 40.0% | |
| ACAATGCTGCTATGCTCATT+TGG | + | chr3.4:4265764-4265783 | MS.gene51627:intron | 40.0% | |
| ACAGGCTGCAAAATTGCAAA+TGG | - | chr3.4:4263218-4263237 | None:intergenic | 40.0% | |
| AGCAAGTGAAGAATGTAACG+AGG | + | chr3.4:4265587-4265606 | MS.gene51627:intron | 40.0% | |
| AGCATGCAACCTTTACACAA+GGG | - | chr3.4:4265169-4265188 | None:intergenic | 40.0% | |
| AGTAATGTAGTCCACTAGGT+TGG | + | chr3.4:4264889-4264908 | MS.gene51627:intron | 40.0% | |
| AGTTCAGCTTGAAGAGAGAA+TGG | + | chr3.4:4264027-4264046 | MS.gene51627:CDS | 40.0% | |
| CACTTCACCTGGAATATATC+AGG | - | chr3.4:4265971-4265990 | None:intergenic | 40.0% | |
| CAGAATCATTGTACGATGAC+AGG | - | chr3.4:4263236-4263255 | None:intergenic | 40.0% | |
| CAGCTTCAGAAAACTTTGCA+TGG | + | chr3.4:4263746-4263765 | MS.gene51627:CDS | 40.0% | |
| CAGTAGTGTCATCATTGAGT+CGG | - | chr3.4:4265741-4265760 | None:intergenic | 40.0% | |
| CCAGATGAAACAGAAGATGT+GGG | + | chr3.4:4264334-4264353 | MS.gene51627:CDS | 40.0% | |
| CGGACAGTATTCATAATGCT+TGG | + | chr3.4:4265671-4265690 | MS.gene51627:intron | 40.0% | |
| CTGAACTTTATTGGACGGAT+TGG | - | chr3.4:4264014-4264033 | None:intergenic | 40.0% | |
| CTGTCATCGTACAATGATTC+TGG | + | chr3.4:4263234-4263253 | MS.gene51627:intron | 40.0% | |
| CTTCAGAAAACTTTGCATGG+AGG | + | chr3.4:4263749-4263768 | MS.gene51627:CDS | 40.0% | |
| CTTCATTATGCAGCAGGTTA+TGG | + | chr3.4:4266055-4266074 | MS.gene51627:CDS | 40.0% | |
| GAAATTGGCATGAACAGTTG+AGG | - | chr3.4:4266161-4266180 | None:intergenic | 40.0% | |
| GACTCAATGATGACACTACT+GGG | + | chr3.4:4265740-4265759 | MS.gene51627:intron | 40.0% | |
| GCAAAAAAAACTTCTGCAGC+GGG | - | chr3.4:4264935-4264954 | None:intergenic | 40.0% | |
| GGATCCAAGTATCAAGGAAT+TGG | + | chr3.4:4263679-4263698 | MS.gene51627:intron | 40.0% | |
| GGCAAAAAAAACTTCTGCAG+CGG | - | chr3.4:4264936-4264955 | None:intergenic | 40.0% | |
| GTATCTTTCATCCATGCAAC+AGG | + | chr3.4:4263814-4263833 | MS.gene51627:CDS | 40.0% | |
| GTTCATCATACTGCTAGTGT+TGG | + | chr3.4:4264376-4264395 | MS.gene51627:CDS | 40.0% | |
| TAGATACTGGAATGATGAGG+AGG | + | chr3.4:4264234-4264253 | MS.gene51627:intron | 40.0% | |
| TCAGCCAATTCCTTGATACT+TGG | - | chr3.4:4263686-4263705 | None:intergenic | 40.0% | |
| TCAGCCATCTGATTGAATGA+TGG | - | chr3.4:4263725-4263744 | None:intergenic | 40.0% | |
| TCCCTGAGTAACTTATAAGG+AGG | + | chr3.4:4265055-4265074 | MS.gene51627:intron | 40.0% | |
| TCTTCACTTGCTTTACACCA+TGG | - | chr3.4:4265579-4265598 | None:intergenic | 40.0% | |
| TGCTGAGAAATCAAAAGGGT+TGG | - | chr3.4:4263011-4263030 | None:intergenic | 40.0% | |
| TGGAGCAAAAGTAGATGCTT+TGG | + | chr3.4:4266012-4266031 | MS.gene51627:CDS | 40.0% | |
| TTGTGTATGCCCTTGTGTAA+AGG | + | chr3.4:4265157-4265176 | MS.gene51627:intron | 40.0% | |
| TTTATAAGCTGGTCATGCGT+TGG | + | chr3.4:4263185-4263204 | MS.gene51627:intron | 40.0% | |
| ! | CGTACAATGATTCTGGGAAT+AGG | + | chr3.4:4263241-4263260 | MS.gene51627:intron | 40.0% |
| ! | CTTCCTACATCTTGTTGTAG+TGG | + | chr3.4:4266180-4266199 | MS.gene51627:intron | 40.0% |
| ! | GCTGCTTCTTCTGAAAATTC+TGG | + | chr3.4:4264310-4264329 | MS.gene51627:CDS | 40.0% |
| ! | GGACTTTTGAACTCATCGTA+TGG | + | chr3.4:4263522-4263541 | MS.gene51627:intron | 40.0% |
| !! | AGCTTTTGGGAGCTTCATAT+TGG | + | chr3.4:4264694-4264713 | MS.gene51627:intron | 40.0% |
| !! | GCTTTTGGGAGCTTCATATT+GGG | + | chr3.4:4264695-4264714 | MS.gene51627:intron | 40.0% |
| !! | TAAAGAACGCTTTTTGCCGA+CGG | - | chr3.4:4263312-4263331 | None:intergenic | 40.0% |
| !! | TCTTTAAGGTACCAACCTAG+TGG | - | chr3.4:4264903-4264922 | None:intergenic | 40.0% |
| !!! | GAGGAGGTTTTGAAGAAGTT+GGG | + | chr3.4:4264250-4264269 | MS.gene51627:CDS | 40.0% |
| !!! | TGAGGAGGTTTTGAAGAAGT+TGG | + | chr3.4:4264249-4264268 | MS.gene51627:CDS | 40.0% |
| AAGTTACTCAGGGAAGTCTG+TGG | - | chr3.4:4265049-4265068 | None:intergenic | 45.0% | |
| AATACTGTCCGAGTTCACTG+TGG | - | chr3.4:4265662-4265681 | None:intergenic | 45.0% | |
| ACAGCTCTTCATTATGCAGC+AGG | + | chr3.4:4266049-4266068 | MS.gene51627:CDS | 45.0% | |
| AGAGAGAATGGCACGCATAA+AGG | + | chr3.4:4264039-4264058 | MS.gene51627:CDS | 45.0% | |
| ATTATGCAGCAGGTTATGGC+AGG | + | chr3.4:4266059-4266078 | MS.gene51627:CDS | 45.0% | |
| ATTTGCCATGACCTGTTGCA+TGG | - | chr3.4:4263828-4263847 | None:intergenic | 45.0% | |
| CAAGCATGGAAGACATCGAT+GGG | - | chr3.4:4263982-4264001 | None:intergenic | 45.0% | |
| CATCTTTCTCAAGAAGCTGG+AGG | - | chr3.4:4266327-4266346 | None:intergenic | 45.0% | |
| CCCACATCTTCTGTTTCATC+TGG | - | chr3.4:4264337-4264356 | None:intergenic | 45.0% | |
| CGACTCAATGATGACACTAC+TGG | + | chr3.4:4265739-4265758 | MS.gene51627:intron | 45.0% | |
| GCCAGATGAAACAGAAGATG+TGG | + | chr3.4:4264333-4264352 | MS.gene51627:CDS | 45.0% | |
| GTCACAGGATCCAAGTATCA+AGG | + | chr3.4:4263673-4263692 | MS.gene51627:intron | 45.0% | |
| GTGAAGAATGTAACGAGGCT+CGG | + | chr3.4:4265592-4265611 | MS.gene51627:intron | 45.0% | |
| GTGCAGTACACCCTAAGTAA+AGG | - | chr3.4:4262724-4262743 | None:intergenic | 45.0% | |
| TCAAGCATGGAAGACATCGA+TGG | - | chr3.4:4263983-4264002 | None:intergenic | 45.0% | |
| TGAAGAATGTAACGAGGCTC+GGG | + | chr3.4:4265593-4265612 | MS.gene51627:intron | 45.0% | |
| TTATGGCAGGAAGGAATGTG+TGG | + | chr3.4:4266072-4266091 | MS.gene51627:CDS | 45.0% | |
| TTCATCCATGCAACAGGTCA+TGG | + | chr3.4:4263820-4263839 | MS.gene51627:CDS | 45.0% | |
| TTCATCCTTATCAGCACCAG+AGG | - | chr3.4:4265403-4265422 | None:intergenic | 45.0% | |
| TTCTTCCACCACAGTGAACT+CGG | + | chr3.4:4265651-4265670 | MS.gene51627:intron | 45.0% | |
| ! | CAATGGTGGAACTTCACAAC+AGG | - | chr3.4:4265294-4265313 | None:intergenic | 45.0% |
| ! | GAGAAATCAAAAGGGTTGGC+TGG | - | chr3.4:4263007-4263026 | None:intergenic | 45.0% |
| !! | AAAGAACGCTTTTTGCCGAC+GGG | - | chr3.4:4263311-4263330 | None:intergenic | 45.0% |
| !! | AAGAAGTTGGGACTAGCCAT+GGG | + | chr3.4:4264262-4264281 | MS.gene51627:CDS | 45.0% |
| !! | CACAGGTGTTATTGTCGTCT+TGG | + | chr3.4:4262444-4262463 | MS.gene51627:intron | 45.0% |
| !! | TGCTAGTGTTGGTGACATTG+AGG | + | chr3.4:4264387-4264406 | MS.gene51627:CDS | 45.0% |
| !! | TTGAATAGAAGGTGCCGATG+TGG | + | chr3.4:4264502-4264521 | MS.gene51627:intron | 45.0% |
| !!! | CGTCTTGGTTTTGTTGGTGT+TGG | + | chr3.4:4262459-4262478 | MS.gene51627:intron | 45.0% |
| AGAAGGAGGAGAGGGCTAAA+TGG | - | chr3.4:4265848-4265867 | None:intergenic | 50.0% | |
| AGCTGGTCATGCGTTGGATT+TGG | + | chr3.4:4263191-4263210 | MS.gene51627:intron | 50.0% | |
| ATATGTAACACCGACAGGCG+TGG | - | chr3.4:4262578-4262597 | None:intergenic | 50.0% | |
| CCTGCATCAATGCATTACCC+AGG | - | chr3.4:4263877-4263896 | None:intergenic | 50.0% | |
| TCTAACAAGCCCTCCCTAGA+AGG | - | chr3.4:4265865-4265884 | None:intergenic | 50.0% | |
| TTAGCCCTCTCCTCCTTCTA+GGG | + | chr3.4:4265849-4265868 | MS.gene51627:intron | 50.0% | |
| TTTAGCCCTCTCCTCCTTCT+AGG | + | chr3.4:4265848-4265867 | MS.gene51627:intron | 50.0% | |
| ! | ACACTGCAGCACCGTTTTCA+AGG | - | chr3.4:4266105-4266124 | None:intergenic | 50.0% |
| ! | AGACGAGAAAGCTGGTTCAG+CGG | + | chr3.4:4262901-4262920 | MS.gene51627:intron | 50.0% |
| ! | CCTGGGTAATGCATTGATGC+AGG | + | chr3.4:4263874-4263893 | MS.gene51627:CDS | 50.0% |
| ! | GTGGCCTTGCTCCTTGAAAA+CGG | + | chr3.4:4266091-4266110 | MS.gene51627:CDS | 50.0% |
| ! | TTTTGCTTGTGGTTACGGCG+AGG | + | chr3.4:4265452-4265471 | MS.gene51627:CDS | 50.0% |
| !! | AGCACCGTTTTCAAGGAGCA+AGG | - | chr3.4:4266098-4266117 | None:intergenic | 50.0% |
| !! | CTACTTTTGCTCCAGCCTCA+AGG | - | chr3.4:4266006-4266025 | None:intergenic | 50.0% |
| !! | GAAGAAGTTGGGACTAGCCA+TGG | + | chr3.4:4264261-4264280 | MS.gene51627:CDS | 50.0% |
| !! | TAGAAGGTGCCGATGTGGTT+AGG | + | chr3.4:4264507-4264526 | MS.gene51627:intron | 50.0% |
| AACAAGCCCTCCCTAGAAGG+AGG | - | chr3.4:4265862-4265881 | None:intergenic | 55.0% | |
| ACATCCTCGAACGCAACTCC+CGG | + | chr3.4:4262947-4262966 | MS.gene51627:CDS | 55.0% | |
| ACCAGTCCCAGGTGGAAAAC+CGG | - | chr3.4:4262981-4263000 | None:intergenic | 55.0% | |
| ACTGTCCGAGTTCACTGTGG+TGG | - | chr3.4:4265659-4265678 | None:intergenic | 55.0% | |
| AGAAGCAGCTGCATCTCCAG+AGG | - | chr3.4:4264299-4264318 | None:intergenic | 55.0% | |
| AGAGGTTGGAGGAATGCCCA+TGG | - | chr3.4:4264281-4264300 | None:intergenic | 55.0% | |
| ATGGGCATTCCTCCAACCTC+TGG | + | chr3.4:4264280-4264299 | MS.gene51627:CDS | 55.0% | |
| ATGTTGGACACCACGCCTGT+CGG | + | chr3.4:4262565-4262584 | MS.gene51627:intron | 55.0% | |
| GCGGTCCTGCTGTAATGATG+AGG | + | chr3.4:4264104-4264123 | MS.gene51627:CDS | 55.0% | |
| TCAGAGGTCTTCACACCCGT+CGG | + | chr3.4:4263293-4263312 | MS.gene51627:intron | 55.0% | |
| TGCAGCAGGTTATGGCAGGA+AGG | + | chr3.4:4266063-4266082 | MS.gene51627:CDS | 55.0% | |
| TTAGGGAGACCACCATCCTG+TGG | - | chr3.4:4263779-4263798 | None:intergenic | 55.0% | |
| TTGGCTGGAAAACCAGTCCC+AGG | - | chr3.4:4262992-4263011 | None:intergenic | 55.0% | |
| ! | TTGAAAGCTGCGCTAGCCTC+TGG | + | chr3.4:4265384-4265403 | MS.gene51627:CDS | 55.0% |
| !! | GCTAGCCTCTGGTGCTGATA+AGG | + | chr3.4:4265395-4265414 | MS.gene51627:CDS | 55.0% |
| !! | TTTGCATGGAGGAGCACCAC+AGG | + | chr3.4:4263760-4263779 | MS.gene51627:CDS | 55.0% |
| ATGACCATGGCTGAGCGCCT+GGG | + | chr3.4:4263857-4263876 | MS.gene51627:CDS | 60.0% | |
| ATTACCCAGGCGCTCAGCCA+TGG | - | chr3.4:4263864-4263883 | None:intergenic | 60.0% | |
| CCCTCCCTAGAAGGAGGAGA+GGG | - | chr3.4:4265856-4265875 | None:intergenic | 60.0% | |
| GAGCTTGCGCACACTTCACC+TGG | - | chr3.4:4265982-4266001 | None:intergenic | 60.0% | |
| GCAGCTGCATCTCCAGAGGT+TGG | - | chr3.4:4264295-4264314 | None:intergenic | 60.0% | |
| GCTGCATCTCCAGAGGTTGG+AGG | - | chr3.4:4264292-4264311 | None:intergenic | 60.0% | |
| GCTGGAAAACCAGTCCCAGG+TGG | - | chr3.4:4262989-4263008 | None:intergenic | 60.0% | |
| GTGTGCGCAAGCTCTCCTTG+AGG | + | chr3.4:4265988-4266007 | MS.gene51627:CDS | 60.0% | |
| TATGACCATGGCTGAGCGCC+TGG | + | chr3.4:4263856-4263875 | MS.gene51627:CDS | 60.0% | |
| TGGAAAACCGGTCCCAGGTC+CGG | - | chr3.4:4262969-4262988 | None:intergenic | 60.0% | |
| ! | CCCTCTCCTCCTTCTAGGGA+GGG | + | chr3.4:4265853-4265872 | MS.gene51627:intron | 60.0% |
| !! | ACCGGTTTTCCACCTGGGAC+TGG | + | chr3.4:4262977-4262996 | MS.gene51627:CDS | 60.0% |
| !! | CATGGAGGAGCACCACAGGA+TGG | + | chr3.4:4263764-4263783 | MS.gene51627:CDS | 60.0% |
| !! | CTGGGACCGGTTTTCCACCT+GGG | + | chr3.4:4262972-4262991 | MS.gene51627:CDS | 60.0% |
| AGGTCCGGGAGTTGCGTTCG+AGG | - | chr3.4:4262954-4262973 | None:intergenic | 65.0% | |
| CCAGGTGGAAAACCGGTCCC+AGG | - | chr3.4:4262974-4262993 | None:intergenic | 65.0% | |
| CGAACGCAACTCCCGGACCT+GGG | + | chr3.4:4262954-4262973 | MS.gene51627:CDS | 65.0% | |
| GCCCTCCCTAGAAGGAGGAG+AGG | - | chr3.4:4265857-4265876 | None:intergenic | 65.0% | |
| GCGCAAGCTCTCCTTGAGGC+TGG | + | chr3.4:4265992-4266011 | MS.gene51627:CDS | 65.0% | |
| GGAAAACCGGTCCCAGGTCC+GGG | - | chr3.4:4262968-4262987 | None:intergenic | 65.0% | |
| TCGAACGCAACTCCCGGACC+TGG | + | chr3.4:4262953-4262972 | MS.gene51627:CDS | 65.0% | |
| ! | GCCCTCTCCTCCTTCTAGGG+AGG | + | chr3.4:4265852-4265871 | MS.gene51627:intron | 65.0% |
| !! | CCTGGGACCGGTTTTCCACC+TGG | + | chr3.4:4262971-4262990 | MS.gene51627:CDS | 65.0% |
| !! | GGAGGAGCACCACAGGATGG+TGG | + | chr3.4:4263767-4263786 | MS.gene51627:CDS | 65.0% |
| GCAACTCCCGGACCTGGGAC+CGG | + | chr3.4:4262959-4262978 | MS.gene51627:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 4262142 | 4266357 | 4262142 | ID=MS.gene51627 |
| chr3.4 | mRNA | 4262142 | 4266357 | 4262142 | ID=MS.gene51627.t1;Parent=MS.gene51627 |
| chr3.4 | exon | 4262142 | 4262175 | 4262142 | ID=MS.gene51627.t1.exon1;Parent=MS.gene51627.t1 |
| chr3.4 | CDS | 4262142 | 4262175 | 4262142 | ID=cds.MS.gene51627.t1;Parent=MS.gene51627.t1 |
| chr3.4 | exon | 4262903 | 4263048 | 4262903 | ID=MS.gene51627.t1.exon2;Parent=MS.gene51627.t1 |
| chr3.4 | CDS | 4262903 | 4263048 | 4262903 | ID=cds.MS.gene51627.t1;Parent=MS.gene51627.t1 |
| chr3.4 | exon | 4263680 | 4263895 | 4263680 | ID=MS.gene51627.t1.exon3;Parent=MS.gene51627.t1 |
| chr3.4 | CDS | 4263680 | 4263895 | 4263680 | ID=cds.MS.gene51627.t1;Parent=MS.gene51627.t1 |
| chr3.4 | exon | 4263977 | 4264125 | 4263977 | ID=MS.gene51627.t1.exon4;Parent=MS.gene51627.t1 |
| chr3.4 | CDS | 4263977 | 4264125 | 4263977 | ID=cds.MS.gene51627.t1;Parent=MS.gene51627.t1 |
| chr3.4 | exon | 4264237 | 4264408 | 4264237 | ID=MS.gene51627.t1.exon5;Parent=MS.gene51627.t1 |
| chr3.4 | CDS | 4264237 | 4264408 | 4264237 | ID=cds.MS.gene51627.t1;Parent=MS.gene51627.t1 |
| chr3.4 | exon | 4265381 | 4265473 | 4265381 | ID=MS.gene51627.t1.exon6;Parent=MS.gene51627.t1 |
| chr3.4 | CDS | 4265381 | 4265473 | 4265381 | ID=cds.MS.gene51627.t1;Parent=MS.gene51627.t1 |
| chr3.4 | exon | 4265983 | 4266122 | 4265983 | ID=MS.gene51627.t1.exon7;Parent=MS.gene51627.t1 |
| chr3.4 | CDS | 4265983 | 4266122 | 4265983 | ID=cds.MS.gene51627.t1;Parent=MS.gene51627.t1 |
| chr3.4 | exon | 4266258 | 4266357 | 4266258 | ID=MS.gene51627.t1.exon8;Parent=MS.gene51627.t1 |
| chr3.4 | CDS | 4266258 | 4266357 | 4266258 | ID=cds.MS.gene51627.t1;Parent=MS.gene51627.t1 |
| Gene Sequence |
| Protein sequence |
