Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63514.t1 | XP_013458822.1 | 96.8 | 349 | 10 | 1 | 1 | 349 | 1 | 348 | 3.00E-88 | 335.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63514.t1 | Q9SAR5 | 49.4 | 257 | 111 | 7 | 1 | 251 | 1 | 244 | 2.4e-38 | 161.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63514.t1 | A0A072USU9 | 96.8 | 349 | 10 | 1 | 1 | 349 | 1 | 348 | 2.1e-88 | 335.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63514.t1 | MTR_3g009280 | 98.281 | 349 | 5 | 1 | 1 | 349 | 1 | 348 | 0.0 | 698 |
| MS.gene63514.t1 | MTR_3g113040 | 56.846 | 241 | 95 | 5 | 1 | 239 | 1 | 234 | 8.03e-84 | 259 |
| MS.gene63514.t1 | MTR_1g054540 | 53.571 | 196 | 59 | 5 | 30 | 225 | 34 | 197 | 1.63e-51 | 176 |
| MS.gene63514.t1 | MTR_1g054620 | 56.818 | 176 | 58 | 4 | 50 | 225 | 18 | 175 | 6.10e-51 | 174 |
| MS.gene63514.t1 | MTR_1g054620 | 56.818 | 176 | 58 | 4 | 50 | 225 | 18 | 175 | 6.42e-51 | 174 |
| MS.gene63514.t1 | MTR_6g034405 | 43.902 | 246 | 106 | 7 | 1 | 242 | 1 | 218 | 1.17e-49 | 171 |
| MS.gene63514.t1 | MTR_3g114110 | 47.264 | 201 | 78 | 5 | 42 | 242 | 39 | 211 | 1.40e-48 | 167 |
| MS.gene63514.t1 | MTR_6g034405 | 43.621 | 243 | 105 | 7 | 1 | 239 | 1 | 215 | 1.89e-48 | 167 |
| MS.gene63514.t1 | MTR_3g114110 | 46.970 | 198 | 77 | 5 | 42 | 239 | 39 | 208 | 6.77e-48 | 164 |
| MS.gene63514.t1 | MTR_3g114110 | 46.970 | 198 | 77 | 5 | 42 | 239 | 39 | 208 | 1.83e-47 | 165 |
| MS.gene63514.t1 | MTR_1g054550 | 52.273 | 176 | 47 | 5 | 50 | 225 | 18 | 156 | 2.49e-42 | 147 |
| MS.gene63514.t1 | MTR_3g115660 | 59.615 | 104 | 36 | 1 | 136 | 239 | 1 | 98 | 1.76e-34 | 122 |
| MS.gene63514.t1 | MTR_1g054600 | 51.163 | 129 | 45 | 4 | 50 | 178 | 86 | 196 | 1.16e-28 | 110 |
| MS.gene63514.t1 | MTR_4g116930 | 39.552 | 134 | 34 | 2 | 179 | 312 | 1 | 87 | 1.97e-17 | 82.4 |
| MS.gene63514.t1 | MTR_5g043640 | 36.879 | 141 | 82 | 1 | 203 | 343 | 75 | 208 | 2.22e-14 | 72.4 |
| MS.gene63514.t1 | MTR_1g476030 | 33.588 | 131 | 84 | 2 | 222 | 349 | 4 | 134 | 3.94e-13 | 70.5 |
| MS.gene63514.t1 | MTR_6g027840 | 37.000 | 100 | 62 | 1 | 245 | 343 | 230 | 329 | 4.33e-12 | 67.4 |
| MS.gene63514.t1 | MTR_1g062770 | 37.705 | 122 | 66 | 4 | 231 | 343 | 43 | 163 | 4.44e-12 | 65.1 |
| MS.gene63514.t1 | MTR_4g075710 | 39.316 | 117 | 68 | 2 | 219 | 332 | 116 | 232 | 2.87e-11 | 64.7 |
| MS.gene63514.t1 | MTR_1g089180 | 37.113 | 97 | 60 | 1 | 233 | 328 | 348 | 444 | 7.51e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63514.t1 | AT2G17390 | 64.326 | 356 | 108 | 5 | 1 | 349 | 1 | 344 | 3.10e-152 | 432 |
| MS.gene63514.t1 | AT4G35450 | 64.387 | 351 | 114 | 6 | 1 | 349 | 1 | 342 | 4.30e-148 | 421 |
| MS.gene63514.t1 | AT4G35450 | 64.387 | 351 | 114 | 6 | 1 | 349 | 1 | 342 | 4.30e-148 | 421 |
| MS.gene63514.t1 | AT4G35450 | 64.387 | 351 | 114 | 6 | 1 | 349 | 1 | 342 | 4.30e-148 | 421 |
| MS.gene63514.t1 | AT4G35450 | 63.231 | 359 | 113 | 7 | 1 | 349 | 1 | 350 | 1.40e-145 | 415 |
| MS.gene63514.t1 | AT4G35450 | 67.638 | 309 | 94 | 3 | 41 | 349 | 2 | 304 | 3.61e-145 | 412 |
| MS.gene63514.t1 | AT2G03430 | 39.000 | 100 | 61 | 0 | 229 | 328 | 87 | 186 | 3.41e-14 | 71.6 |
| MS.gene63514.t1 | AT3G23280 | 34.400 | 125 | 79 | 2 | 228 | 349 | 10 | 134 | 1.14e-13 | 72.0 |
| MS.gene63514.t1 | AT3G23280 | 34.400 | 125 | 79 | 2 | 228 | 349 | 10 | 134 | 1.20e-13 | 72.0 |
| MS.gene63514.t1 | AT5G53470 | 34.615 | 104 | 68 | 0 | 229 | 332 | 222 | 325 | 2.87e-13 | 70.5 |
| MS.gene63514.t1 | AT5G12320 | 35.354 | 99 | 64 | 0 | 233 | 331 | 19 | 117 | 5.28e-12 | 63.5 |
| MS.gene63514.t1 | AT4G27780 | 33.654 | 104 | 69 | 0 | 229 | 332 | 237 | 340 | 8.63e-12 | 65.9 |
| MS.gene63514.t1 | AT2G47450 | 40.351 | 114 | 66 | 2 | 220 | 332 | 123 | 235 | 1.51e-11 | 65.5 |
Find 90 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTCAAGCTGAACTTTAT+TGG | 0.122980 | 3.3:-4619160 | None:intergenic |
| GCTGCTTCTTCTGAAAATTC+TGG | 0.165755 | 3.3:+4619450 | MS.gene63514:CDS |
| CCCACATCTTCTGTTTCATC+TGG | 0.296289 | 3.3:-4619474 | None:intergenic |
| TTGCAGTACTCTGCAAAATA+TGG | 0.299162 | 3.3:+4621393 | MS.gene63514:intron |
| TCAGCCATGGTCATAAAATT+AGG | 0.317600 | 3.3:-4618988 | None:intergenic |
| CTTCATTATGCAGCAGGTTA+TGG | 0.341988 | 3.3:+4621195 | MS.gene63514:CDS |
| TTTAGTTTCGCAACATCTAT+AGG | 0.348547 | 3.3:-4621427 | None:intergenic |
| TCTCAAAAGGATATTCCTTC+TGG | 0.350480 | 3.3:+4617301 | MS.gene63514:CDS |
| TATGACCATGGCTGAGCGCC+TGG | 0.371236 | 3.3:+4618996 | MS.gene63514:CDS |
| TGGAAAACCGGTCCCAGGTC+CGG | 0.375249 | 3.3:-4618108 | None:intergenic |
| AGAGAGAATGGCACGCATAA+AGG | 0.386835 | 3.3:+4619179 | MS.gene63514:CDS |
| CTCATTGCTGAGAAATCAAA+AGG | 0.392741 | 3.3:-4618155 | None:intergenic |
| CTGCTTCTTCTGAAAATTCT+GGG | 0.395319 | 3.3:+4619451 | MS.gene63514:CDS |
| CAGCTGCATCTCCAGAGGTT+GGG | 0.399916 | 3.3:-4619431 | None:intergenic |
| TCAGCCAATTCCTTGATACT+TGG | 0.405646 | 3.3:-4618823 | None:intergenic |
| GGATCCAAGTATCAAGGAAT+TGG | 0.418761 | 3.3:+4618819 | MS.gene63514:intron |
| TACTGCTGATTATCAAAGTT+AGG | 0.425274 | 3.3:-4618934 | None:intergenic |
| CTGAACTTTATTGGACGGAT+TGG | 0.428989 | 3.3:-4619151 | None:intergenic |
| AGCTGCATCTCCAGAGGTTG+GGG | 0.436485 | 3.3:-4619430 | None:intergenic |
| ACCAGTCCCAGGTGGAAAAC+CGG | 0.440893 | 3.3:-4618120 | None:intergenic |
| TTGAAAGCTGCGCTAGCCTC+TGG | 0.443610 | 3.3:+4620528 | MS.gene63514:CDS |
| GAGATAGAGAATGGCGGTCC+TGG | 0.454684 | 3.3:+4619231 | MS.gene63514:CDS |
| AGGTCCGGGAGTTGCGTTCG+AGG | 0.459739 | 3.3:-4618093 | None:intergenic |
| GCGCAAGCTCTCCTTGAGGC+TGG | 0.462394 | 3.3:+4621132 | MS.gene63514:CDS |
| GGAAAACCGGTCCCAGGTCC+GGG | 0.463114 | 3.3:-4618107 | None:intergenic |
| TCGAACGCAACTCCCGGACC+TGG | 0.465039 | 3.3:+4618095 | MS.gene63514:CDS |
| TCTAAAATATGTTTCAAAGA+TGG | 0.467672 | 3.3:-4619207 | None:intergenic |
| TGGAGCAAAAGTAGATGCTT+TGG | 0.468103 | 3.3:+4621152 | MS.gene63514:CDS |
| GAAGAAGTTGGGACTAGCCA+TGG | 0.471435 | 3.3:+4619401 | MS.gene63514:CDS |
| GTATCTTTCATCCATGCAAC+AGG | 0.477789 | 3.3:+4618954 | MS.gene63514:CDS |
| GAGAAATCAAAAGGGTTGGC+TGG | 0.479871 | 3.3:-4618146 | None:intergenic |
| CATGGCTTCCAATTCTCAAA+AGG | 0.488909 | 3.3:+4617288 | None:intergenic |
| AAACATCTTTCTCAAGAAGC+TGG | 0.492614 | 3.3:-4621468 | None:intergenic |
| GCTAGCCTCTGGTGCTGATA+AGG | 0.495452 | 3.3:+4620539 | MS.gene63514:CDS |
| ACAGCTCTTCATTATGCAGC+AGG | 0.511661 | 3.3:+4621189 | MS.gene63514:CDS |
| ACTGCTGATTATCAAAGTTA+GGG | 0.515114 | 3.3:-4618933 | None:intergenic |
| AGTTCAGCTTGAAGAGAGAA+TGG | 0.515247 | 3.3:+4619167 | MS.gene63514:CDS |
| GCAGCTGCATCTCCAGAGGT+TGG | 0.515578 | 3.3:-4619432 | None:intergenic |
| ATTATGCAGCAGGTTATGGC+AGG | 0.522371 | 3.3:+4621199 | MS.gene63514:CDS |
| TTCATCCATGCAACAGGTCA+TGG | 0.523490 | 3.3:+4618960 | MS.gene63514:CDS |
| GCAACTCCCGGACCTGGGAC+CGG | 0.525973 | 3.3:+4618101 | MS.gene63514:CDS |
| ATTGGTAAAACTTTCAAGCA+TGG | 0.527566 | 3.3:-4619133 | None:intergenic |
| GTCACAGGATCCAAGTATCA+AGG | 0.533298 | 3.3:+4618813 | MS.gene63514:intron |
| TTTGATTTCTCAGCAATGAG+TGG | 0.534737 | 3.3:+4618158 | MS.gene63514:CDS |
| TGCTGAGAAATCAAAAGGGT+TGG | 0.535067 | 3.3:-4618150 | None:intergenic |
| CCAGGTGGAAAACCGGTCCC+AGG | 0.535701 | 3.3:-4618113 | None:intergenic |
| GTGGCCTTGCTCCTTGAAAA+CGG | 0.539036 | 3.3:+4621231 | MS.gene63514:CDS |
| CCTGGGTAATGCATTGATGC+AGG | 0.543657 | 3.3:+4619014 | MS.gene63514:CDS |
| CGAACGCAACTCCCGGACCT+GGG | 0.544955 | 3.3:+4618096 | MS.gene63514:CDS |
| TCAAGCTGAACTTTATTGGA+CGG | 0.545387 | 3.3:-4619156 | None:intergenic |
| AGATCCATCATTCAATGAGA+TGG | 0.546145 | 3.3:+4618858 | MS.gene63514:CDS |
| CAGCTTCAGAAAACTTTGCA+TGG | 0.549622 | 3.3:+4618886 | MS.gene63514:CDS |
| ACATCCTCGAACGCAACTCC+CGG | 0.550672 | 3.3:+4618089 | MS.gene63514:CDS |
| ATGACCATGGCTGAGCGCCT+GGG | 0.553159 | 3.3:+4618997 | MS.gene63514:CDS |
| GCCAGATGAAACAGAAGATG+TGG | 0.557340 | 3.3:+4619473 | MS.gene63514:CDS |
| TTTGCATGGAGGAGCACCAC+AGG | 0.559317 | 3.3:+4618900 | MS.gene63514:CDS |
| TCAGCCATCTCATTGAATGA+TGG | 0.561210 | 3.3:-4618862 | None:intergenic |
| GTACTCTGCAAAATATGGAC+GGG | 0.566073 | 3.3:+4621398 | MS.gene63514:intron |
| ATTTGCCATGACCTGTTGCA+TGG | 0.569040 | 3.3:-4618965 | None:intergenic |
| GTTCATCATACTGCTAGTGT+TGG | 0.576940 | 3.3:+4619516 | MS.gene63514:CDS |
| AAGAAGTTGGGACTAGCCAT+GGG | 0.580948 | 3.3:+4619402 | MS.gene63514:CDS |
| CAAGCATGGAAGACATCGAT+GGG | 0.587730 | 3.3:-4619119 | None:intergenic |
| TAAGGATGAAGAAGATTCAG+AGG | 0.591403 | 3.3:+4620557 | MS.gene63514:CDS |
| TTGGCTGGAAAACCAGTCCC+AGG | 0.592571 | 3.3:-4618131 | None:intergenic |
| TCAAGCATGGAAGACATCGA+TGG | 0.593586 | 3.3:-4619120 | None:intergenic |
| AGAAGCAGCTGCATCTCCAG+AGG | 0.600724 | 3.3:-4619436 | None:intergenic |
| TGCAGCAGGTTATGGCAGGA+AGG | 0.601460 | 3.3:+4621203 | MS.gene63514:CDS |
| AAGGATGAAGAAGATTCAGA+GGG | 0.609631 | 3.3:+4620558 | MS.gene63514:CDS |
| ATTACCCAGGCGCTCAGCCA+TGG | 0.617162 | 3.3:-4619001 | None:intergenic |
| TTCATCCTTATCAGCACCAG+AGG | 0.620315 | 3.3:-4620544 | None:intergenic |
| TGCTAGTGTTGGTGACATTG+AGG | 0.628525 | 3.3:+4619527 | MS.gene63514:CDS |
| TCATTGCTGAGAAATCAAAA+GGG | 0.629369 | 3.3:-4618154 | None:intergenic |
| AGTACTCTGCAAAATATGGA+CGG | 0.631464 | 3.3:+4621397 | MS.gene63514:intron |
| CATGGAGGAGCACCACAGGA+TGG | 0.634179 | 3.3:+4618904 | MS.gene63514:CDS |
| AGACGAGAAAGCTGGTTCAG+CGG | 0.641290 | 3.3:+4618043 | MS.gene63514:intron |
| TAGATACTGGAATGATGAGG+AGG | 0.645865 | 3.3:+4619374 | MS.gene63514:intron |
| CCTGCATCAATGCATTACCC+AGG | 0.649558 | 3.3:-4619014 | None:intergenic |
| CCAGATGAAACAGAAGATGT+GGG | 0.652505 | 3.3:+4619474 | MS.gene63514:CDS |
| ATCTAGATACTGGAATGATG+AGG | 0.659169 | 3.3:+4619371 | MS.gene63514:intron |
| GGAGGAGCACCACAGGATGG+TGG | 0.665535 | 3.3:+4618907 | MS.gene63514:CDS |
| ATAAACCTCATCATTACACC+AGG | 0.669148 | 3.3:-4619249 | None:intergenic |
| CATCTTTCTCAAGAAGCTGG+AGG | 0.671030 | 3.3:-4621465 | None:intergenic |
| TTATGGCAGGAAGGAATGTG+TGG | 0.674267 | 3.3:+4621212 | MS.gene63514:CDS |
| GCGGTCCTGGTGTAATGATG+AGG | 0.680752 | 3.3:+4619244 | MS.gene63514:CDS |
| TTAGGGAGACCACCATCCTG+TGG | 0.684695 | 3.3:-4618916 | None:intergenic |
| GCTGGAAAACCAGTCCCAGG+TGG | 0.687890 | 3.3:-4618128 | None:intergenic |
| GTGTGCGCAAGCTCTCCTTG+AGG | 0.688818 | 3.3:+4621128 | MS.gene63514:CDS |
| GCTGCATCTCCAGAGGTTGG+GGG | 0.691769 | 3.3:-4619429 | None:intergenic |
| CTTCAGAAAACTTTGCATGG+AGG | 0.695368 | 3.3:+4618889 | MS.gene63514:CDS |
| TTAGATGAGATAGAGAATGG+CGG | 0.730427 | 3.3:+4619225 | MS.gene63514:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAGAAAATCATATTTTA+TGG | + | chr3.3:4619284-4619303 | MS.gene63514:intron | 10.0% |
| !!! | ATGATTTTCTTTTTTAAAAA+TGG | - | chr3.3:4619278-4619297 | None:intergenic | 10.0% |
| !! | ATCTTTGTAATAATCATTTA+AGG | + | chr3.3:4618589-4618608 | MS.gene63514:intron | 15.0% |
| !! | GTATTATTTATTCAACTATT+CGG | + | chr3.3:4620452-4620471 | MS.gene63514:intron | 15.0% |
| !! | TAGTTGAATAAATAATACAA+TGG | - | chr3.3:4620450-4620469 | None:intergenic | 15.0% |
| !!! | AAAATCATATTTTATGGTTT+TGG | + | chr3.3:4619290-4619309 | MS.gene63514:intron | 15.0% |
| !!! | AGTTAAATAGTTTTATACAT+TGG | - | chr3.3:4618760-4618779 | None:intergenic | 15.0% |
| !! | AATACTATTATGATCCAAAT+TGG | - | chr3.3:4618554-4618573 | None:intergenic | 20.0% |
| !! | ACATAATTGAATATAATCAC+AGG | + | chr3.3:4617573-4617592 | MS.gene63514:intron | 20.0% |
| !! | AGTATTTACACTAATCAATT+AGG | + | chr3.3:4620503-4620522 | MS.gene63514:intron | 20.0% |
| !! | ATACATTCTTATCTAACAAT+CGG | - | chr3.3:4619081-4619100 | None:intergenic | 20.0% |
| !! | ATTACTATAATACTTATGCA+TGG | - | chr3.3:4620015-4620034 | None:intergenic | 20.0% |
| !! | ATTTGTATAGACAATACAAA+GGG | + | chr3.3:4617825-4617844 | MS.gene63514:intron | 20.0% |
| !! | CATATAAGTAAAAATCACAT+AGG | - | chr3.3:4617793-4617812 | None:intergenic | 20.0% |
| !! | CCAATTTACATAACAAATTA+TGG | - | chr3.3:4619324-4619343 | None:intergenic | 20.0% |
| !! | GAATTTAAAGAGATGAAAAT+AGG | + | chr3.3:4619683-4619702 | MS.gene63514:intron | 20.0% |
| !! | GTATTTACACTAATCAATTA+GGG | + | chr3.3:4620504-4620523 | MS.gene63514:intron | 20.0% |
| !! | TACATCAATAACAATTAACA+GGG | - | chr3.3:4618266-4618285 | None:intergenic | 20.0% |
| !! | TATAAAACTATTTAACTACG+TGG | + | chr3.3:4618763-4618782 | MS.gene63514:intron | 20.0% |
| !! | TATTTGTATAGACAATACAA+AGG | + | chr3.3:4617824-4617843 | MS.gene63514:intron | 20.0% |
| !! | TGTACAAAAAAAACATAATC+AGG | - | chr3.3:4617435-4617454 | None:intergenic | 20.0% |
| !! | TTACATCAATAACAATTAAC+AGG | - | chr3.3:4618267-4618286 | None:intergenic | 20.0% |
| !! | TTGAATAAATAATACAATGG+TGG | - | chr3.3:4620447-4620466 | None:intergenic | 20.0% |
| !!! | AAACTGATATATTTTTCCAA+AGG | - | chr3.3:4619863-4619882 | None:intergenic | 20.0% |
| !!! | AGAATATATGTATTTGTTGT+TGG | + | chr3.3:4620678-4620697 | MS.gene63514:intron | 20.0% |
| !!! | AGAATTTTACAATTCTAGTT+TGG | + | chr3.3:4621049-4621068 | MS.gene63514:intron | 20.0% |
| !!! | ATGAAACTTTTTTGAATAGA+AGG | + | chr3.3:4619631-4619650 | MS.gene63514:intron | 20.0% |
| !!! | ATTGATTTTTTGTTCACTAT+CGG | + | chr3.3:4617375-4617394 | MS.gene63514:intron | 20.0% |
| !!! | CCATAATTTGTTATGTAAAT+TGG | + | chr3.3:4619321-4619340 | MS.gene63514:intron | 20.0% |
| !!! | CTATGTGATTTTTACTTATA+TGG | + | chr3.3:4617791-4617810 | MS.gene63514:intron | 20.0% |
| !!! | TACATATATTCTAAGAAACA+AGG | - | chr3.3:4620670-4620689 | None:intergenic | 20.0% |
| !!! | TCTAAAATATGTTTCAAAGA+TGG | - | chr3.3:4619210-4619229 | None:intergenic | 20.0% |
| !!! | TGAGTTTGATTTTTTTTTTG+TGG | + | chr3.3:4617476-4617495 | MS.gene63514:intron | 20.0% |
| !!! | TTGTTTAAGGTAATATCAAA+AGG | + | chr3.3:4619762-4619781 | MS.gene63514:intron | 20.0% |
| !!! | TTTATTGAAGAGTTTAAGTT+AGG | + | chr3.3:4618629-4618648 | MS.gene63514:intron | 20.0% |
| ! | AAAGCTTATAGAATGATAGT+TGG | - | chr3.3:4619820-4619839 | None:intergenic | 25.0% |
| ! | AATTATAGATAGATACCAGA+AGG | - | chr3.3:4617319-4617338 | None:intergenic | 25.0% |
| ! | AGCAAAATTAGTAGTGTTAT+TGG | - | chr3.3:4617923-4617942 | None:intergenic | 25.0% |
| ! | TAACGTAACAAATATGTAAG+AGG | - | chr3.3:4619906-4619925 | None:intergenic | 25.0% |
| ! | TTAAAATGTCAATATGTCAC+AGG | + | chr3.3:4618798-4618817 | MS.gene63514:intron | 25.0% |
| ! | TTAATCCATACATTGGAATT+AGG | - | chr3.3:4621080-4621099 | None:intergenic | 25.0% |
| ! | TTACCTATAAAACACAAACA+TGG | + | chr3.3:4617504-4617523 | MS.gene63514:intron | 25.0% |
| !! | AAATCCTAATTTTATGACCA+TGG | + | chr3.3:4618984-4619003 | MS.gene63514:CDS | 25.0% |
| !! | AATTCTTTTCATCTAGATAC+TGG | + | chr3.3:4619361-4619380 | MS.gene63514:intron | 25.0% |
| !! | ACTATCATTCTATAAGCTTT+TGG | + | chr3.3:4619820-4619839 | MS.gene63514:intron | 25.0% |
| !! | ATTTTAGATGAGATAGAGAA+TGG | + | chr3.3:4619222-4619241 | MS.gene63514:CDS | 25.0% |
| !!! | AAATTCTGAACTTTTTTCAG+AGG | + | chr3.3:4618419-4618438 | MS.gene63514:intron | 25.0% |
| !!! | AGAATTTTATTTTCCTCAAG+AGG | - | chr3.3:4619936-4619955 | None:intergenic | 25.0% |
| !!! | CCAGTAAAACACAATTTTTT+GGG | + | chr3.3:4620228-4620247 | MS.gene63514:intron | 25.0% |
| !!! | GCATATTTTAATCCATACAT+TGG | - | chr3.3:4621087-4621106 | None:intergenic | 25.0% |
| !!! | GTTTTATTTGTTTACTTCGA+AGG | + | chr3.3:4620331-4620350 | MS.gene63514:intron | 25.0% |
| AAAAATGAAAAGAGAGAGTC+GGG | - | chr3.3:4618694-4618713 | None:intergenic | 30.0% | |
| AACAAGATGTAGGAAGAAAT+TGG | - | chr3.3:4621320-4621339 | None:intergenic | 30.0% | |
| AACACACTTATCATGATATC+TGG | - | chr3.3:4617685-4617704 | None:intergenic | 30.0% | |
| ACAAATTTGTAGTTGTGCTT+GGG | + | chr3.3:4619607-4619626 | MS.gene63514:intron | 30.0% | |
| AGACACTTATCCTTTACTTA+GGG | + | chr3.3:4617857-4617876 | MS.gene63514:intron | 30.0% | |
| AGCAAACCAATACTAAAGAA+AGG | - | chr3.3:4620385-4620404 | None:intergenic | 30.0% | |
| AGTTTATTGAAGCAAGTTCT+AGG | + | chr3.3:4620121-4620140 | MS.gene63514:intron | 30.0% | |
| ATTGCTCCTTTCTTTAGTAT+TGG | + | chr3.3:4620376-4620395 | MS.gene63514:intron | 30.0% | |
| ATTGGTAAAACTTTCAAGCA+TGG | - | chr3.3:4619136-4619155 | None:intergenic | 30.0% | |
| GAAAAATGAAAAGAGAGAGT+CGG | - | chr3.3:4618695-4618714 | None:intergenic | 30.0% | |
| GAAGAAAATCACAATGCTAT+AGG | - | chr3.3:4620781-4620800 | None:intergenic | 30.0% | |
| GGAATATAAGTCAATTGAGT+AGG | - | chr3.3:4620168-4620187 | None:intergenic | 30.0% | |
| GTAATTAATTGTCTCACAGT+TGG | + | chr3.3:4619714-4619733 | MS.gene63514:intron | 30.0% | |
| GTTTCTGCATGAATTGTTTA+AGG | + | chr3.3:4619749-4619768 | MS.gene63514:intron | 30.0% | |
| TAGAATATTAGATTCTACCC+TGG | + | chr3.3:4620931-4620950 | MS.gene63514:intron | 30.0% | |
| TAGACACTTATCCTTTACTT+AGG | + | chr3.3:4617856-4617875 | MS.gene63514:intron | 30.0% | |
| TCATTGCTGAGAAATCAAAA+GGG | - | chr3.3:4618157-4618176 | None:intergenic | 30.0% | |
| TTATAGTAATGTAGTCCACT+AGG | + | chr3.3:4620025-4620044 | MS.gene63514:intron | 30.0% | |
| TTCTTCCTAATTCCAATGTA+TGG | + | chr3.3:4621072-4621091 | MS.gene63514:intron | 30.0% | |
| ! | ACTGCTGATTATCAAAGTTA+GGG | - | chr3.3:4618936-4618955 | None:intergenic | 30.0% |
| ! | AGTACTTTCATTTAGAACCA+TGG | + | chr3.3:4620703-4620722 | MS.gene63514:intron | 30.0% |
| ! | ATGGAATCATTTTCAAACCA+AGG | - | chr3.3:4619996-4620015 | None:intergenic | 30.0% |
| ! | CCCAAAAAATTGTGTTTTAC+TGG | - | chr3.3:4620231-4620250 | None:intergenic | 30.0% |
| ! | GAAGTGTGTTATTGTTGTAT+TGG | + | chr3.3:4617650-4617669 | MS.gene63514:intron | 30.0% |
| ! | GACGTTGTGTTCTAATTTTA+GGG | - | chr3.3:4620097-4620116 | None:intergenic | 30.0% |
| ! | TAAGTGTGTTATTGTCATGT+TGG | + | chr3.3:4617695-4617714 | MS.gene63514:intron | 30.0% |
| ! | TACTGCTGATTATCAAAGTT+AGG | - | chr3.3:4618937-4618956 | None:intergenic | 30.0% |
| ! | TGACGTTGTGTTCTAATTTT+AGG | - | chr3.3:4620098-4620117 | None:intergenic | 30.0% |
| ! | TGCTATTTGCATTATATGTG+TGG | + | chr3.3:4618214-4618233 | MS.gene63514:intron | 30.0% |
| ! | TGTCCATGTTTGTGTTTTAT+AGG | - | chr3.3:4617510-4617529 | None:intergenic | 30.0% |
| ! | TTACATTTTGCTTGTGGTTA+CGG | + | chr3.3:4620591-4620610 | MS.gene63514:CDS | 30.0% |
| ! | TTTAGTTTCGCAACATCTAT+AGG | - | chr3.3:4621430-4621449 | None:intergenic | 30.0% |
| !! | ACATGCATGTTTTTATAAGC+TGG | + | chr3.3:4618316-4618335 | MS.gene63514:intron | 30.0% |
| !! | AGGAATATCCTTTTGAGAAT+TGG | - | chr3.3:4617299-4617318 | None:intergenic | 30.0% |
| !! | CTAATTTTGCTGTAGTCTTT+TGG | + | chr3.3:4617932-4617951 | MS.gene63514:intron | 30.0% |
| !! | CTTTTCATTTTTCACTCACT+AGG | + | chr3.3:4618702-4618721 | MS.gene63514:intron | 30.0% |
| !!! | ATTTTTTTAGACGAGAAAGC+TGG | + | chr3.3:4618035-4618054 | MS.gene63514:intron | 30.0% |
| !!! | CATATTGACTTTTCGCAATA+TGG | + | chr3.3:4619555-4619574 | MS.gene63514:intron | 30.0% |
| !!! | GCCAGTAAAACACAATTTTT+TGG | + | chr3.3:4620227-4620246 | MS.gene63514:intron | 30.0% |
| !!! | TTCTGGGAATAGGTTTTATT+AGG | + | chr3.3:4618393-4618412 | MS.gene63514:intron | 30.0% |
| AAAATCGCATAGGAAGATAC+TGG | - | chr3.3:4617758-4617777 | None:intergenic | 35.0% | |
| AAACATCTTTCTCAAGAAGC+TGG | - | chr3.3:4621471-4621490 | None:intergenic | 35.0% | |
| AAATTGGCAGCAACTACAAA+AGG | - | chr3.3:4618538-4618557 | None:intergenic | 35.0% | |
| AAGGATGAAGAAGATTCAGA+GGG | + | chr3.3:4620558-4620577 | MS.gene63514:CDS | 35.0% | |
| ACGTTACATATTTCCTCTTG+AGG | + | chr3.3:4619920-4619939 | MS.gene63514:intron | 35.0% | |
| ACTTCCCTGAGTAACTTATA+AGG | + | chr3.3:4620192-4620211 | MS.gene63514:intron | 35.0% | |
| AGATCACTACAACAAGATGT+AGG | - | chr3.3:4621330-4621349 | None:intergenic | 35.0% | |
| AGATCCATCATTCAATGAGA+TGG | + | chr3.3:4618858-4618877 | MS.gene63514:CDS | 35.0% | |
| AGCAAATGAAGAATGTAACG+AGG | + | chr3.3:4620731-4620750 | MS.gene63514:intron | 35.0% | |
| AGCTTTCCATATCATGATAG+TGG | + | chr3.3:4618506-4618525 | MS.gene63514:intron | 35.0% | |
| AGTACTCTGCAAAATATGGA+CGG | + | chr3.3:4621397-4621416 | MS.gene63514:intron | 35.0% | |
| ATAAACCTCATCATTACACC+AGG | - | chr3.3:4619252-4619271 | None:intergenic | 35.0% | |
| ATATGCTCCTGATATATTCC+AGG | + | chr3.3:4621101-4621120 | MS.gene63514:intron | 35.0% | |
| ATCCTCCTTATAAGTTACTC+AGG | - | chr3.3:4620200-4620219 | None:intergenic | 35.0% | |
| ATCTAGATACTGGAATGATG+AGG | + | chr3.3:4619371-4619390 | MS.gene63514:intron | 35.0% | |
| ATGTATATGCTGTCTATCAC+AGG | + | chr3.3:4619095-4619114 | MS.gene63514:intron | 35.0% | |
| CCATACATATACAAGAACCA+GGG | - | chr3.3:4620951-4620970 | None:intergenic | 35.0% | |
| CTCATTGCTGAGAAATCAAA+AGG | - | chr3.3:4618158-4618177 | None:intergenic | 35.0% | |
| CTCTTCAAGCTGAACTTTAT+TGG | - | chr3.3:4619163-4619182 | None:intergenic | 35.0% | |
| CTGATTCCACTATCATGATA+TGG | - | chr3.3:4618515-4618534 | None:intergenic | 35.0% | |
| GACAAATTTGTAGTTGTGCT+TGG | + | chr3.3:4619606-4619625 | MS.gene63514:intron | 35.0% | |
| GTAATATATGTAACACCGAC+AGG | - | chr3.3:4617729-4617748 | None:intergenic | 35.0% | |
| TAAGGATGAAGAAGATTCAG+AGG | + | chr3.3:4620557-4620576 | MS.gene63514:CDS | 35.0% | |
| TCAAGCTGAACTTTATTGGA+CGG | - | chr3.3:4619159-4619178 | None:intergenic | 35.0% | |
| TCAGCCATGGTCATAAAATT+AGG | - | chr3.3:4618991-4619010 | None:intergenic | 35.0% | |
| TCCTCCTTATAAGTTACTCA+GGG | - | chr3.3:4620199-4620218 | None:intergenic | 35.0% | |
| TCTCAAAAGGATATTCCTTC+TGG | + | chr3.3:4617301-4617320 | MS.gene63514:CDS | 35.0% | |
| TCTTCATTTGCTTTACACCA+TGG | - | chr3.3:4620723-4620742 | None:intergenic | 35.0% | |
| TGTCATCGTACAATGATTCT+GGG | + | chr3.3:4618377-4618396 | MS.gene63514:intron | 35.0% | |
| TTAGATGAGATAGAGAATGG+CGG | + | chr3.3:4619225-4619244 | MS.gene63514:CDS | 35.0% | |
| TTCTATTCCAAACAACTCCT+TGG | + | chr3.3:4619976-4619995 | MS.gene63514:intron | 35.0% | |
| TTGCAGTACTCTGCAAAATA+TGG | + | chr3.3:4621393-4621412 | MS.gene63514:intron | 35.0% | |
| TTTATAAGCTGGTCATGCAT+TGG | + | chr3.3:4618327-4618346 | MS.gene63514:intron | 35.0% | |
| TTTCAAACCAAGGAGTTGTT+TGG | - | chr3.3:4619986-4620005 | None:intergenic | 35.0% | |
| ! | ACTGCTTTACATTTTGCTTG+TGG | + | chr3.3:4620585-4620604 | MS.gene63514:CDS | 35.0% |
| ! | CTGCTTCTTCTGAAAATTCT+GGG | + | chr3.3:4619451-4619470 | MS.gene63514:CDS | 35.0% |
| ! | TAAGTTAGGTGAAGCATTTG+AGG | + | chr3.3:4618643-4618662 | MS.gene63514:intron | 35.0% |
| ! | TTTGATTTCTCAGCAATGAG+TGG | + | chr3.3:4618158-4618177 | MS.gene63514:CDS | 35.0% |
| ! | TTTTGTAGTTGCTGCCAATT+TGG | + | chr3.3:4618537-4618556 | MS.gene63514:intron | 35.0% |
| !! | AGCTTTTGGAAGCTTCATAT+TGG | + | chr3.3:4619834-4619853 | MS.gene63514:intron | 35.0% |
| !! | GCTTTTGGAAGCTTCATATT+GGG | + | chr3.3:4619835-4619854 | MS.gene63514:intron | 35.0% |
| !! | TAAAGAACGCTTTTTGCCAA+CGG | - | chr3.3:4618454-4618473 | None:intergenic | 35.0% |
| !!! | GCGGGTGTTTTATTTCTTTA+AGG | - | chr3.3:4620057-4620076 | None:intergenic | 35.0% |
| !!! | TATTGTCGTCTTGGTTTTGT+TGG | + | chr3.3:4617599-4617618 | MS.gene63514:intron | 35.0% |
| AAGCATGCAACCTTTACACA+AGG | - | chr3.3:4620310-4620329 | None:intergenic | 40.0% | |
| ACAATGCTGCTATGCTCATT+TGG | + | chr3.3:4620905-4620924 | MS.gene63514:intron | 40.0% | |
| ACAGGCTGCAAAATTGCAAA+TGG | - | chr3.3:4618360-4618379 | None:intergenic | 40.0% | |
| AGCATGCAACCTTTACACAA+GGG | - | chr3.3:4620309-4620328 | None:intergenic | 40.0% | |
| AGCTTCATATTGGGATCCTT+TGG | + | chr3.3:4619844-4619863 | MS.gene63514:intron | 40.0% | |
| AGTAATGTAGTCCACTAGGT+TGG | + | chr3.3:4620029-4620048 | MS.gene63514:intron | 40.0% | |
| AGTTCAGCTTGAAGAGAGAA+TGG | + | chr3.3:4619167-4619186 | MS.gene63514:CDS | 40.0% | |
| ATGAAGAATGTAACGAGGCT+CGG | + | chr3.3:4620736-4620755 | MS.gene63514:intron | 40.0% | |
| CACTTCACCTGGAATATATC+AGG | - | chr3.3:4621111-4621130 | None:intergenic | 40.0% | |
| CAGAATCATTGTACGATGAC+AGG | - | chr3.3:4618378-4618397 | None:intergenic | 40.0% | |
| CAGCTTCAGAAAACTTTGCA+TGG | + | chr3.3:4618886-4618905 | MS.gene63514:CDS | 40.0% | |
| CAGTAGTGTCATCATTGAGT+CGG | - | chr3.3:4620882-4620901 | None:intergenic | 40.0% | |
| CCAGATGAAACAGAAGATGT+GGG | + | chr3.3:4619474-4619493 | MS.gene63514:CDS | 40.0% | |
| CGGACAGTATTCATAATGCT+TGG | + | chr3.3:4620813-4620832 | MS.gene63514:intron | 40.0% | |
| CTGAACTTTATTGGACGGAT+TGG | - | chr3.3:4619154-4619173 | None:intergenic | 40.0% | |
| CTGTCATCGTACAATGATTC+TGG | + | chr3.3:4618376-4618395 | MS.gene63514:intron | 40.0% | |
| CTTCAGAAAACTTTGCATGG+AGG | + | chr3.3:4618889-4618908 | MS.gene63514:CDS | 40.0% | |
| CTTCATTATGCAGCAGGTTA+TGG | + | chr3.3:4621195-4621214 | MS.gene63514:CDS | 40.0% | |
| GAAATTGGCATGAACAGTTG+AGG | - | chr3.3:4621305-4621324 | None:intergenic | 40.0% | |
| GACGCTAGTAAAAATCGCAT+AGG | - | chr3.3:4617768-4617787 | None:intergenic | 40.0% | |
| GACTCAATGATGACACTACT+GGG | + | chr3.3:4620881-4620900 | MS.gene63514:intron | 40.0% | |
| GCAAAAAAAACTTCTGCAGC+GGG | - | chr3.3:4620075-4620094 | None:intergenic | 40.0% | |
| GCCATACATATACAAGAACC+AGG | - | chr3.3:4620952-4620971 | None:intergenic | 40.0% | |
| GGATCCAAGTATCAAGGAAT+TGG | + | chr3.3:4618819-4618838 | MS.gene63514:intron | 40.0% | |
| GGCAAAAAAAACTTCTGCAG+CGG | - | chr3.3:4620076-4620095 | None:intergenic | 40.0% | |
| GTACTCTGCAAAATATGGAC+GGG | + | chr3.3:4621398-4621417 | MS.gene63514:intron | 40.0% | |
| GTATCTTTCATCCATGCAAC+AGG | + | chr3.3:4618954-4618973 | MS.gene63514:CDS | 40.0% | |
| GTTCATCATACTGCTAGTGT+TGG | + | chr3.3:4619516-4619535 | MS.gene63514:CDS | 40.0% | |
| TAGATACTGGAATGATGAGG+AGG | + | chr3.3:4619374-4619393 | MS.gene63514:intron | 40.0% | |
| TCAGCCAATTCCTTGATACT+TGG | - | chr3.3:4618826-4618845 | None:intergenic | 40.0% | |
| TCAGCCATCTCATTGAATGA+TGG | - | chr3.3:4618865-4618884 | None:intergenic | 40.0% | |
| TCCCTGAGTAACTTATAAGG+AGG | + | chr3.3:4620195-4620214 | MS.gene63514:intron | 40.0% | |
| TGCTGAGAAATCAAAAGGGT+TGG | - | chr3.3:4618153-4618172 | None:intergenic | 40.0% | |
| TGGAGCAAAAGTAGATGCTT+TGG | + | chr3.3:4621152-4621171 | MS.gene63514:CDS | 40.0% | |
| TTGTGTATGCCCTTGTGTAA+AGG | + | chr3.3:4620297-4620316 | MS.gene63514:intron | 40.0% | |
| ! | CCCTGGTTCTTGTATATGTA+TGG | + | chr3.3:4620948-4620967 | MS.gene63514:intron | 40.0% |
| ! | CGTACAATGATTCTGGGAAT+AGG | + | chr3.3:4618383-4618402 | MS.gene63514:intron | 40.0% |
| ! | GCTGCTTCTTCTGAAAATTC+TGG | + | chr3.3:4619450-4619469 | MS.gene63514:CDS | 40.0% |
| ! | GGACTTTTGAACTCATCGTA+TGG | + | chr3.3:4618664-4618683 | MS.gene63514:intron | 40.0% |
| ! | TTGAATAGAAGGTGCAGATG+TGG | + | chr3.3:4619642-4619661 | MS.gene63514:intron | 40.0% |
| ! | TTTTCTTCCACCAGTGAACT+CGG | + | chr3.3:4620793-4620812 | MS.gene63514:intron | 40.0% |
| !! | AAAGAACGCTTTTTGCCAAC+GGG | - | chr3.3:4618453-4618472 | None:intergenic | 40.0% |
| !! | TCTTTAAGGTACCAACCTAG+TGG | - | chr3.3:4620043-4620062 | None:intergenic | 40.0% |
| !!! | GAGGAGGTTTTGAAGAAGTT+GGG | + | chr3.3:4619390-4619409 | MS.gene63514:CDS | 40.0% |
| !!! | TGAGGAGGTTTTGAAGAAGT+TGG | + | chr3.3:4619389-4619408 | MS.gene63514:CDS | 40.0% |
| AAGTTACTCAGGGAAGTCTG+TGG | - | chr3.3:4620189-4620208 | None:intergenic | 45.0% | |
| ACAGCTCTTCATTATGCAGC+AGG | + | chr3.3:4621189-4621208 | MS.gene63514:CDS | 45.0% | |
| AGAGAGAATGGCACGCATAA+AGG | + | chr3.3:4619179-4619198 | MS.gene63514:CDS | 45.0% | |
| AGCTGGTCATGCATTGGATT+TGG | + | chr3.3:4618333-4618352 | MS.gene63514:intron | 45.0% | |
| ATTATGCAGCAGGTTATGGC+AGG | + | chr3.3:4621199-4621218 | MS.gene63514:CDS | 45.0% | |
| ATTTGCCATGACCTGTTGCA+TGG | - | chr3.3:4618968-4618987 | None:intergenic | 45.0% | |
| CAAGCATGGAAGACATCGAT+GGG | - | chr3.3:4619122-4619141 | None:intergenic | 45.0% | |
| CATCTTTCTCAAGAAGCTGG+AGG | - | chr3.3:4621468-4621487 | None:intergenic | 45.0% | |
| CCCACATCTTCTGTTTCATC+TGG | - | chr3.3:4619477-4619496 | None:intergenic | 45.0% | |
| CGACTCAATGATGACACTAC+TGG | + | chr3.3:4620880-4620899 | MS.gene63514:intron | 45.0% | |
| GCCAGATGAAACAGAAGATG+TGG | + | chr3.3:4619473-4619492 | MS.gene63514:CDS | 45.0% | |
| GTCACAGGATCCAAGTATCA+AGG | + | chr3.3:4618813-4618832 | MS.gene63514:intron | 45.0% | |
| GTGCAGTACACCCTAAGTAA+AGG | - | chr3.3:4617870-4617889 | None:intergenic | 45.0% | |
| TCAAGCATGGAAGACATCGA+TGG | - | chr3.3:4619123-4619142 | None:intergenic | 45.0% | |
| TGAAGAATGTAACGAGGCTC+GGG | + | chr3.3:4620737-4620756 | MS.gene63514:intron | 45.0% | |
| TGAATACTGTCCGAGTTCAC+TGG | - | chr3.3:4620806-4620825 | None:intergenic | 45.0% | |
| TTATGGCAGGAAGGAATGTG+TGG | + | chr3.3:4621212-4621231 | MS.gene63514:CDS | 45.0% | |
| TTCATCCATGCAACAGGTCA+TGG | + | chr3.3:4618960-4618979 | MS.gene63514:CDS | 45.0% | |
| TTCATCCTTATCAGCACCAG+AGG | - | chr3.3:4620547-4620566 | None:intergenic | 45.0% | |
| ! | CAATGGTGGAACTTCACAAC+AGG | - | chr3.3:4620433-4620452 | None:intergenic | 45.0% |
| ! | GAGAAATCAAAAGGGTTGGC+TGG | - | chr3.3:4618149-4618168 | None:intergenic | 45.0% |
| ! | TAGAAGGTGCAGATGTGGTT+AGG | + | chr3.3:4619647-4619666 | MS.gene63514:intron | 45.0% |
| !! | AAGAAGTTGGGACTAGCCAT+GGG | + | chr3.3:4619402-4619421 | MS.gene63514:CDS | 45.0% |
| !! | CACAGGTGTTATTGTCGTCT+TGG | + | chr3.3:4617590-4617609 | MS.gene63514:intron | 45.0% |
| !! | TGCTAGTGTTGGTGACATTG+AGG | + | chr3.3:4619527-4619546 | MS.gene63514:CDS | 45.0% |
| !!! | CGTCTTGGTTTTGTTGGTGT+TGG | + | chr3.3:4617605-4617624 | MS.gene63514:intron | 45.0% |
| AGAAGGAGGAGAGGGCTAAA+TGG | - | chr3.3:4620989-4621008 | None:intergenic | 50.0% | |
| ATACTGTCCGAGTTCACTGG+TGG | - | chr3.3:4620803-4620822 | None:intergenic | 50.0% | |
| ATATGTAACACCGACAGGCG+TGG | - | chr3.3:4617724-4617743 | None:intergenic | 50.0% | |
| CCTGCATCAATGCATTACCC+AGG | - | chr3.3:4619017-4619036 | None:intergenic | 50.0% | |
| TCTAACAAGCCCTCCCTAGA+AGG | - | chr3.3:4621006-4621025 | None:intergenic | 50.0% | |
| TTAGCCCTCTCCTCCTTCTA+GGG | + | chr3.3:4620990-4621009 | MS.gene63514:intron | 50.0% | |
| TTTAGCCCTCTCCTCCTTCT+AGG | + | chr3.3:4620989-4621008 | MS.gene63514:intron | 50.0% | |
| ! | ACACTGCAGCACCGTTTTCA+AGG | - | chr3.3:4621245-4621264 | None:intergenic | 50.0% |
| ! | AGACGAGAAAGCTGGTTCAG+CGG | + | chr3.3:4618043-4618062 | MS.gene63514:intron | 50.0% |
| ! | CCTGGGTAATGCATTGATGC+AGG | + | chr3.3:4619014-4619033 | MS.gene63514:CDS | 50.0% |
| ! | GTGGCCTTGCTCCTTGAAAA+CGG | + | chr3.3:4621231-4621250 | MS.gene63514:CDS | 50.0% |
| ! | TTTTGCTTGTGGTTACGGCG+AGG | + | chr3.3:4620596-4620615 | MS.gene63514:CDS | 50.0% |
| !! | AGCACCGTTTTCAAGGAGCA+AGG | - | chr3.3:4621238-4621257 | None:intergenic | 50.0% |
| !! | CTACTTTTGCTCCAGCCTCA+AGG | - | chr3.3:4621146-4621165 | None:intergenic | 50.0% |
| !! | GAAGAAGTTGGGACTAGCCA+TGG | + | chr3.3:4619401-4619420 | MS.gene63514:CDS | 50.0% |
| AACAAGCCCTCCCTAGAAGG+AGG | - | chr3.3:4621003-4621022 | None:intergenic | 55.0% | |
| ACATCCTCGAACGCAACTCC+CGG | + | chr3.3:4618089-4618108 | MS.gene63514:CDS | 55.0% | |
| ACCAGTCCCAGGTGGAAAAC+CGG | - | chr3.3:4618123-4618142 | None:intergenic | 55.0% | |
| AGAAGCAGCTGCATCTCCAG+AGG | - | chr3.3:4619439-4619458 | None:intergenic | 55.0% | |
| AGCTGCATCTCCAGAGGTTG+GGG | - | chr3.3:4619433-4619452 | None:intergenic | 55.0% | |
| ATGTTGGACACCACGCCTGT+CGG | + | chr3.3:4617711-4617730 | MS.gene63514:intron | 55.0% | |
| CAGCTGCATCTCCAGAGGTT+GGG | - | chr3.3:4619434-4619453 | None:intergenic | 55.0% | |
| GAGATAGAGAATGGCGGTCC+TGG | + | chr3.3:4619231-4619250 | MS.gene63514:CDS | 55.0% | |
| GCGGTCCTGGTGTAATGATG+AGG | + | chr3.3:4619244-4619263 | MS.gene63514:CDS | 55.0% | |
| TCAGAGGTCTTCACACCCGT+TGG | + | chr3.3:4618435-4618454 | MS.gene63514:intron | 55.0% | |
| TGCAGCAGGTTATGGCAGGA+AGG | + | chr3.3:4621203-4621222 | MS.gene63514:CDS | 55.0% | |
| TTAGGGAGACCACCATCCTG+TGG | - | chr3.3:4618919-4618938 | None:intergenic | 55.0% | |
| TTGGCTGGAAAACCAGTCCC+AGG | - | chr3.3:4618134-4618153 | None:intergenic | 55.0% | |
| ! | TTGAAAGCTGCGCTAGCCTC+TGG | + | chr3.3:4620528-4620547 | MS.gene63514:CDS | 55.0% |
| !! | GCTAGCCTCTGGTGCTGATA+AGG | + | chr3.3:4620539-4620558 | MS.gene63514:CDS | 55.0% |
| !! | TTTGCATGGAGGAGCACCAC+AGG | + | chr3.3:4618900-4618919 | MS.gene63514:CDS | 55.0% |
| AGAGGTTGGGGGAATGCCCA+TGG | - | chr3.3:4619421-4619440 | None:intergenic | 60.0% | |
| ATGACCATGGCTGAGCGCCT+GGG | + | chr3.3:4618997-4619016 | MS.gene63514:CDS | 60.0% | |
| ATGGGCATTCCCCCAACCTC+TGG | + | chr3.3:4619420-4619439 | MS.gene63514:CDS | 60.0% | |
| ATTACCCAGGCGCTCAGCCA+TGG | - | chr3.3:4619004-4619023 | None:intergenic | 60.0% | |
| CCCTCCCTAGAAGGAGGAGA+GGG | - | chr3.3:4620997-4621016 | None:intergenic | 60.0% | |
| GAGCTTGCGCACACTTCACC+TGG | - | chr3.3:4621122-4621141 | None:intergenic | 60.0% | |
| GCAGCTGCATCTCCAGAGGT+TGG | - | chr3.3:4619435-4619454 | None:intergenic | 60.0% | |
| GCTGCATCTCCAGAGGTTGG+GGG | - | chr3.3:4619432-4619451 | None:intergenic | 60.0% | |
| GCTGGAAAACCAGTCCCAGG+TGG | - | chr3.3:4618131-4618150 | None:intergenic | 60.0% | |
| GTGTGCGCAAGCTCTCCTTG+AGG | + | chr3.3:4621128-4621147 | MS.gene63514:CDS | 60.0% | |
| TATGACCATGGCTGAGCGCC+TGG | + | chr3.3:4618996-4619015 | MS.gene63514:CDS | 60.0% | |
| TGGAAAACCGGTCCCAGGTC+CGG | - | chr3.3:4618111-4618130 | None:intergenic | 60.0% | |
| ! | CCCTCTCCTCCTTCTAGGGA+GGG | + | chr3.3:4620994-4621013 | MS.gene63514:intron | 60.0% |
| !! | ACCGGTTTTCCACCTGGGAC+TGG | + | chr3.3:4618119-4618138 | MS.gene63514:CDS | 60.0% |
| !! | CATGGAGGAGCACCACAGGA+TGG | + | chr3.3:4618904-4618923 | MS.gene63514:CDS | 60.0% |
| !! | CTGGGACCGGTTTTCCACCT+GGG | + | chr3.3:4618114-4618133 | MS.gene63514:CDS | 60.0% |
| AGGTCCGGGAGTTGCGTTCG+AGG | - | chr3.3:4618096-4618115 | None:intergenic | 65.0% | |
| CCAGGTGGAAAACCGGTCCC+AGG | - | chr3.3:4618116-4618135 | None:intergenic | 65.0% | |
| CGAACGCAACTCCCGGACCT+GGG | + | chr3.3:4618096-4618115 | MS.gene63514:CDS | 65.0% | |
| GCCCTCCCTAGAAGGAGGAG+AGG | - | chr3.3:4620998-4621017 | None:intergenic | 65.0% | |
| GCGCAAGCTCTCCTTGAGGC+TGG | + | chr3.3:4621132-4621151 | MS.gene63514:CDS | 65.0% | |
| GGAAAACCGGTCCCAGGTCC+GGG | - | chr3.3:4618110-4618129 | None:intergenic | 65.0% | |
| TCGAACGCAACTCCCGGACC+TGG | + | chr3.3:4618095-4618114 | MS.gene63514:CDS | 65.0% | |
| ! | GCCCTCTCCTCCTTCTAGGG+AGG | + | chr3.3:4620993-4621012 | MS.gene63514:intron | 65.0% |
| !! | CCTGGGACCGGTTTTCCACC+TGG | + | chr3.3:4618113-4618132 | MS.gene63514:CDS | 65.0% |
| !! | GGAGGAGCACCACAGGATGG+TGG | + | chr3.3:4618907-4618926 | MS.gene63514:CDS | 65.0% |
| GCAACTCCCGGACCTGGGAC+CGG | + | chr3.3:4618101-4618120 | MS.gene63514:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 4617289 | 4621498 | 4617289 | ID=MS.gene63514 |
| chr3.3 | mRNA | 4617289 | 4621498 | 4617289 | ID=MS.gene63514.t1;Parent=MS.gene63514 |
| chr3.3 | exon | 4617289 | 4617322 | 4617289 | ID=MS.gene63514.t1.exon1;Parent=MS.gene63514.t1 |
| chr3.3 | CDS | 4617289 | 4617322 | 4617289 | ID=cds.MS.gene63514.t1;Parent=MS.gene63514.t1 |
| chr3.3 | exon | 4618045 | 4618190 | 4618045 | ID=MS.gene63514.t1.exon2;Parent=MS.gene63514.t1 |
| chr3.3 | CDS | 4618045 | 4618190 | 4618045 | ID=cds.MS.gene63514.t1;Parent=MS.gene63514.t1 |
| chr3.3 | exon | 4618820 | 4619035 | 4618820 | ID=MS.gene63514.t1.exon3;Parent=MS.gene63514.t1 |
| chr3.3 | CDS | 4618820 | 4619035 | 4618820 | ID=cds.MS.gene63514.t1;Parent=MS.gene63514.t1 |
| chr3.3 | exon | 4619117 | 4619265 | 4619117 | ID=MS.gene63514.t1.exon4;Parent=MS.gene63514.t1 |
| chr3.3 | CDS | 4619117 | 4619265 | 4619117 | ID=cds.MS.gene63514.t1;Parent=MS.gene63514.t1 |
| chr3.3 | exon | 4619377 | 4619548 | 4619377 | ID=MS.gene63514.t1.exon5;Parent=MS.gene63514.t1 |
| chr3.3 | CDS | 4619377 | 4619548 | 4619377 | ID=cds.MS.gene63514.t1;Parent=MS.gene63514.t1 |
| chr3.3 | exon | 4620525 | 4620617 | 4620525 | ID=MS.gene63514.t1.exon6;Parent=MS.gene63514.t1 |
| chr3.3 | CDS | 4620525 | 4620617 | 4620525 | ID=cds.MS.gene63514.t1;Parent=MS.gene63514.t1 |
| chr3.3 | exon | 4621123 | 4621262 | 4621123 | ID=MS.gene63514.t1.exon7;Parent=MS.gene63514.t1 |
| chr3.3 | CDS | 4621123 | 4621262 | 4621123 | ID=cds.MS.gene63514.t1;Parent=MS.gene63514.t1 |
| chr3.3 | exon | 4621399 | 4621498 | 4621399 | ID=MS.gene63514.t1.exon8;Parent=MS.gene63514.t1 |
| chr3.3 | CDS | 4621399 | 4621498 | 4621399 | ID=cds.MS.gene63514.t1;Parent=MS.gene63514.t1 |
| Gene Sequence |
| Protein sequence |
