Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56256.t1 | XP_013458822.1 | 97.4 | 349 | 8 | 1 | 1 | 349 | 1 | 348 | 7.80E-89 | 337.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56256.t1 | Q9SAR5 | 49.0 | 257 | 112 | 7 | 1 | 251 | 1 | 244 | 9.1e-38 | 159.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56256.t1 | A0A072USU9 | 97.4 | 349 | 8 | 1 | 1 | 349 | 1 | 348 | 5.6e-89 | 337.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56256.t1 | MTR_3g009280 | 98.854 | 349 | 3 | 1 | 1 | 349 | 1 | 348 | 0.0 | 702 |
| MS.gene56256.t1 | MTR_3g113040 | 57.676 | 241 | 93 | 5 | 1 | 239 | 1 | 234 | 5.93e-85 | 262 |
| MS.gene56256.t1 | MTR_1g054540 | 53.571 | 196 | 59 | 5 | 30 | 225 | 34 | 197 | 1.15e-51 | 176 |
| MS.gene56256.t1 | MTR_1g054620 | 56.818 | 176 | 58 | 4 | 50 | 225 | 18 | 175 | 3.91e-51 | 174 |
| MS.gene56256.t1 | MTR_1g054620 | 56.818 | 176 | 58 | 4 | 50 | 225 | 18 | 175 | 4.73e-51 | 174 |
| MS.gene56256.t1 | MTR_6g034405 | 44.715 | 246 | 104 | 7 | 1 | 242 | 1 | 218 | 9.16e-51 | 174 |
| MS.gene56256.t1 | MTR_3g114110 | 48.259 | 201 | 76 | 5 | 42 | 242 | 39 | 211 | 8.55e-50 | 171 |
| MS.gene56256.t1 | MTR_6g034405 | 44.444 | 243 | 103 | 7 | 1 | 239 | 1 | 215 | 1.58e-49 | 170 |
| MS.gene56256.t1 | MTR_3g114110 | 47.980 | 198 | 75 | 5 | 42 | 239 | 39 | 208 | 5.53e-49 | 167 |
| MS.gene56256.t1 | MTR_3g114110 | 47.980 | 198 | 75 | 5 | 42 | 239 | 39 | 208 | 1.45e-48 | 167 |
| MS.gene56256.t1 | MTR_1g054550 | 52.273 | 176 | 47 | 5 | 50 | 225 | 18 | 156 | 1.85e-42 | 147 |
| MS.gene56256.t1 | MTR_3g115660 | 60.577 | 104 | 35 | 1 | 136 | 239 | 1 | 98 | 4.58e-35 | 124 |
| MS.gene56256.t1 | MTR_1g054600 | 51.938 | 129 | 44 | 4 | 50 | 178 | 86 | 196 | 4.21e-29 | 112 |
| MS.gene56256.t1 | MTR_4g116930 | 39.552 | 134 | 34 | 2 | 179 | 312 | 1 | 87 | 1.86e-17 | 82.4 |
| MS.gene56256.t1 | MTR_5g043640 | 36.879 | 141 | 82 | 1 | 203 | 343 | 75 | 208 | 2.47e-14 | 72.4 |
| MS.gene56256.t1 | MTR_1g476030 | 33.588 | 131 | 84 | 2 | 222 | 349 | 4 | 134 | 3.59e-13 | 70.5 |
| MS.gene56256.t1 | MTR_6g027840 | 37.000 | 100 | 62 | 1 | 245 | 343 | 230 | 329 | 4.25e-12 | 67.4 |
| MS.gene56256.t1 | MTR_1g062770 | 37.705 | 122 | 66 | 4 | 231 | 343 | 43 | 163 | 4.44e-12 | 65.1 |
| MS.gene56256.t1 | MTR_4g075710 | 39.316 | 117 | 68 | 2 | 219 | 332 | 116 | 232 | 2.77e-11 | 64.7 |
| MS.gene56256.t1 | MTR_1g089180 | 37.113 | 97 | 60 | 1 | 233 | 328 | 348 | 444 | 7.05e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56256.t1 | AT2G17390 | 64.607 | 356 | 107 | 5 | 1 | 349 | 1 | 344 | 4.10e-153 | 434 |
| MS.gene56256.t1 | AT4G35450 | 64.672 | 351 | 113 | 6 | 1 | 349 | 1 | 342 | 7.91e-149 | 423 |
| MS.gene56256.t1 | AT4G35450 | 64.672 | 351 | 113 | 6 | 1 | 349 | 1 | 342 | 7.91e-149 | 423 |
| MS.gene56256.t1 | AT4G35450 | 64.672 | 351 | 113 | 6 | 1 | 349 | 1 | 342 | 7.91e-149 | 423 |
| MS.gene56256.t1 | AT4G35450 | 63.510 | 359 | 112 | 7 | 1 | 349 | 1 | 350 | 2.85e-146 | 417 |
| MS.gene56256.t1 | AT4G35450 | 67.961 | 309 | 93 | 3 | 41 | 349 | 2 | 304 | 7.99e-146 | 414 |
| MS.gene56256.t1 | AT2G03430 | 39.000 | 100 | 61 | 0 | 229 | 328 | 87 | 186 | 3.51e-14 | 71.6 |
| MS.gene56256.t1 | AT3G23280 | 34.400 | 125 | 79 | 2 | 228 | 349 | 10 | 134 | 1.09e-13 | 72.4 |
| MS.gene56256.t1 | AT3G23280 | 34.400 | 125 | 79 | 2 | 228 | 349 | 10 | 134 | 1.19e-13 | 72.0 |
| MS.gene56256.t1 | AT5G53470 | 34.615 | 104 | 68 | 0 | 229 | 332 | 222 | 325 | 2.77e-13 | 70.5 |
| MS.gene56256.t1 | AT5G12320 | 35.354 | 99 | 64 | 0 | 233 | 331 | 19 | 117 | 5.28e-12 | 63.5 |
| MS.gene56256.t1 | AT4G27780 | 33.654 | 104 | 69 | 0 | 229 | 332 | 237 | 340 | 8.55e-12 | 65.9 |
| MS.gene56256.t1 | AT2G47450 | 40.351 | 114 | 66 | 2 | 220 | 332 | 123 | 235 | 1.65e-11 | 65.1 |
Find 89 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTCAAGCTGAACTTTAT+TGG | 0.122980 | 3.1:-4701869 | None:intergenic |
| GCTGCTTCTTCTGAAAATTC+TGG | 0.165755 | 3.1:+4702159 | MS.gene56256:CDS |
| TTGCAGTACTCTGCAAAATA+TGG | 0.286124 | 3.1:+4704101 | MS.gene56256:intron |
| CCCACATCTTCTGTTTCATC+TGG | 0.296289 | 3.1:-4702183 | None:intergenic |
| TTTAATTTCGCAACATCTAT+AGG | 0.306488 | 3.1:-4704135 | None:intergenic |
| TCAGCCATGGTCATAAAATT+AGG | 0.317600 | 3.1:-4701697 | None:intergenic |
| CTTCATTATGCAGCAGGTTA+TGG | 0.341988 | 3.1:+4703905 | MS.gene56256:CDS |
| TCTCAAAAGGATATTCCTTC+TGG | 0.350480 | 3.1:+4700006 | MS.gene56256:CDS |
| TATGACCATGGCTGAGCGCC+TGG | 0.371236 | 3.1:+4701705 | MS.gene56256:CDS |
| TGGAAAACCGGTCCCAGGTC+CGG | 0.375249 | 3.1:-4700815 | None:intergenic |
| AGAGAGAATGGCACGCATAA+AGG | 0.386835 | 3.1:+4701888 | MS.gene56256:CDS |
| CTCATTGCTGAGAAATCAAA+AGG | 0.392741 | 3.1:-4700862 | None:intergenic |
| CTGCTTCTTCTGAAAATTCT+GGG | 0.395319 | 3.1:+4702160 | MS.gene56256:CDS |
| TCAGCCAATTCCTTGATACT+TGG | 0.405646 | 3.1:-4701532 | None:intergenic |
| GGATCCAAGTATCAAGGAAT+TGG | 0.418761 | 3.1:+4701528 | MS.gene56256:intron |
| TACTGCTGATTATCAAAGTT+AGG | 0.425274 | 3.1:-4701643 | None:intergenic |
| CTGAACTTTATTGGACGGAT+TGG | 0.428989 | 3.1:-4701860 | None:intergenic |
| ACCAGTCCCAGGTGGAAAAC+CGG | 0.440893 | 3.1:-4700827 | None:intergenic |
| TTGAAAGCTGCGCTAGCCTC+TGG | 0.443610 | 3.1:+4703234 | MS.gene56256:CDS |
| AGGTCCGGGAGTTGCGTTCG+AGG | 0.459739 | 3.1:-4700800 | None:intergenic |
| GCGCAAGCTCTCCTTGAGGC+TGG | 0.462394 | 3.1:+4703842 | MS.gene56256:CDS |
| GGAAAACCGGTCCCAGGTCC+GGG | 0.463114 | 3.1:-4700814 | None:intergenic |
| TCGAACGCAACTCCCGGACC+TGG | 0.465039 | 3.1:+4700802 | MS.gene56256:CDS |
| ATGGGCATTCCTCCAACCTC+TGG | 0.465285 | 3.1:+4702129 | MS.gene56256:CDS |
| TCTAAAATATGTTTCAAAGA+TGG | 0.467672 | 3.1:-4701916 | None:intergenic |
| TGGAGCAAAAGTAGATGCTT+TGG | 0.468103 | 3.1:+4703862 | MS.gene56256:CDS |
| GAAGAAGTTGGGACTAGCCA+TGG | 0.471435 | 3.1:+4702110 | MS.gene56256:CDS |
| GTATCTTTCATCCATGCAAC+AGG | 0.477789 | 3.1:+4701663 | MS.gene56256:CDS |
| GAGAAATCAAAAGGGTTGGC+TGG | 0.479871 | 3.1:-4700853 | None:intergenic |
| CATGGCTTCCAATTCTCAAA+AGG | 0.488909 | 3.1:+4699993 | None:intergenic |
| AAACATCTTTCTCAAGAAGC+TGG | 0.492614 | 3.1:-4704176 | None:intergenic |
| GCTAGCCTCTGGTGCTGATA+AGG | 0.495452 | 3.1:+4703245 | MS.gene56256:CDS |
| ACAGCTCTTCATTATGCAGC+AGG | 0.511661 | 3.1:+4703899 | MS.gene56256:CDS |
| ACTGCTGATTATCAAAGTTA+GGG | 0.515114 | 3.1:-4701642 | None:intergenic |
| AGTTCAGCTTGAAGAGAGAA+TGG | 0.515247 | 3.1:+4701876 | MS.gene56256:CDS |
| ATTATGCAGCAGGTTATGGC+AGG | 0.522371 | 3.1:+4703909 | MS.gene56256:CDS |
| TTCATCCATGCAACAGGTCA+TGG | 0.523490 | 3.1:+4701669 | MS.gene56256:CDS |
| GCAGCTGCATCTCCAGAGGT+TGG | 0.525843 | 3.1:-4702141 | None:intergenic |
| GCAACTCCCGGACCTGGGAC+CGG | 0.525973 | 3.1:+4700808 | MS.gene56256:CDS |
| ATTGGTAAAACTTTCAAGCA+TGG | 0.527566 | 3.1:-4701842 | None:intergenic |
| GTCACAGGATCCAAGTATCA+AGG | 0.533298 | 3.1:+4701522 | MS.gene56256:intron |
| TTTGATTTCTCAGCAATGAG+TGG | 0.534737 | 3.1:+4700865 | MS.gene56256:CDS |
| TGCTGAGAAATCAAAAGGGT+TGG | 0.535067 | 3.1:-4700857 | None:intergenic |
| CCAGGTGGAAAACCGGTCCC+AGG | 0.535701 | 3.1:-4700820 | None:intergenic |
| GTGGCCTTGCTCCTTGAAAA+CGG | 0.539036 | 3.1:+4703941 | MS.gene56256:CDS |
| CCTGGGTAATGCATTGATGC+AGG | 0.543657 | 3.1:+4701723 | MS.gene56256:CDS |
| CGAACGCAACTCCCGGACCT+GGG | 0.544955 | 3.1:+4700803 | MS.gene56256:CDS |
| TCAAGCTGAACTTTATTGGA+CGG | 0.545387 | 3.1:-4701865 | None:intergenic |
| AGATCCATCATTCAATCAGA+TGG | 0.548584 | 3.1:+4701567 | MS.gene56256:CDS |
| CAGCTTCAGAAAACTTTGCA+TGG | 0.549622 | 3.1:+4701595 | MS.gene56256:CDS |
| ACATCCTCGAACGCAACTCC+CGG | 0.550672 | 3.1:+4700796 | MS.gene56256:CDS |
| ATGACCATGGCTGAGCGCCT+GGG | 0.553159 | 3.1:+4701706 | MS.gene56256:CDS |
| GCCAGATGAAACAGAAGATG+TGG | 0.557340 | 3.1:+4702182 | MS.gene56256:CDS |
| TTTGCATGGAGGAGCACCAC+AGG | 0.559317 | 3.1:+4701609 | MS.gene56256:CDS |
| AGTACTCTGCAAAATATGGA+TGG | 0.567263 | 3.1:+4704105 | MS.gene56256:intron |
| ATTTGCCATGACCTGTTGCA+TGG | 0.569040 | 3.1:-4701674 | None:intergenic |
| GTTCATCATACTGCTAGTGT+TGG | 0.576940 | 3.1:+4702225 | MS.gene56256:CDS |
| AAGAAGTTGGGACTAGCCAT+GGG | 0.580948 | 3.1:+4702111 | MS.gene56256:CDS |
| GCTGCATCTCCAGAGGTTGG+AGG | 0.582935 | 3.1:-4702138 | None:intergenic |
| CAAGCATGGAAGACATCGAT+GGG | 0.587730 | 3.1:-4701828 | None:intergenic |
| ATAAACCTCATCATTACAGC+AGG | 0.589232 | 3.1:-4701958 | None:intergenic |
| TCAGCCATCTGATTGAATGA+TGG | 0.589706 | 3.1:-4701571 | None:intergenic |
| TAAGGATGAAGAAGATTCAG+AGG | 0.591403 | 3.1:+4703263 | MS.gene56256:CDS |
| TTGGCTGGAAAACCAGTCCC+AGG | 0.592571 | 3.1:-4700838 | None:intergenic |
| TCAAGCATGGAAGACATCGA+TGG | 0.593586 | 3.1:-4701829 | None:intergenic |
| GTACTCTGCAAAATATGGAT+GGG | 0.595986 | 3.1:+4704106 | MS.gene56256:intron |
| AGAAGCAGCTGCATCTCCAG+AGG | 0.600724 | 3.1:-4702145 | None:intergenic |
| TGCAGCAGGTTATGGCAGGA+AGG | 0.601460 | 3.1:+4703913 | MS.gene56256:CDS |
| AAGGATGAAGAAGATTCAGA+GGG | 0.609631 | 3.1:+4703264 | MS.gene56256:CDS |
| ATTACCCAGGCGCTCAGCCA+TGG | 0.617162 | 3.1:-4701710 | None:intergenic |
| TTCATCCTTATCAGCACCAG+AGG | 0.620315 | 3.1:-4703250 | None:intergenic |
| TGCTAGTGTTGGTGACATTG+AGG | 0.628525 | 3.1:+4702236 | MS.gene56256:CDS |
| TCATTGCTGAGAAATCAAAA+GGG | 0.629369 | 3.1:-4700861 | None:intergenic |
| CATGGAGGAGCACCACAGGA+TGG | 0.634179 | 3.1:+4701613 | MS.gene56256:CDS |
| AGACGAGAAAGCTGGTTCAG+CGG | 0.641290 | 3.1:+4700750 | MS.gene56256:intron |
| TAGATACTGGAATGATGAGG+AGG | 0.645865 | 3.1:+4702083 | MS.gene56256:intron |
| CCTGCATCAATGCATTACCC+AGG | 0.649558 | 3.1:-4701723 | None:intergenic |
| CCAGATGAAACAGAAGATGT+GGG | 0.652505 | 3.1:+4702183 | MS.gene56256:CDS |
| AGAGGTTGGAGGAATGCCCA+TGG | 0.656046 | 3.1:-4702127 | None:intergenic |
| ATCTAGATACTGGAATGATG+AGG | 0.659169 | 3.1:+4702080 | MS.gene56256:intron |
| GGAGGAGCACCACAGGATGG+TGG | 0.665535 | 3.1:+4701616 | MS.gene56256:CDS |
| CATCTTTCTCAAGAAGCTGG+AGG | 0.671030 | 3.1:-4704173 | None:intergenic |
| TTATGGCAGGAAGGAATGTG+TGG | 0.674267 | 3.1:+4703922 | MS.gene56256:CDS |
| TTAGGGAGACCACCATCCTG+TGG | 0.684695 | 3.1:-4701625 | None:intergenic |
| GCTGGAAAACCAGTCCCAGG+TGG | 0.687890 | 3.1:-4700835 | None:intergenic |
| GTGTGCGCAAGCTCTCCTTG+AGG | 0.688818 | 3.1:+4703838 | MS.gene56256:CDS |
| GCGGTCCTGCTGTAATGATG+AGG | 0.692207 | 3.1:+4701953 | MS.gene56256:CDS |
| CTTCAGAAAACTTTGCATGG+AGG | 0.695368 | 3.1:+4701598 | MS.gene56256:CDS |
| TTAGATGAGATAGAGAATGG+CGG | 0.730427 | 3.1:+4701934 | MS.gene56256:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAGAAAATCATATTTTA+TGG | + | chr3.1:4701993-4702012 | MS.gene56256:intron | 10.0% |
| !!! | ATGATTTTCTTTTTTAAAAA+TGG | - | chr3.1:4701987-4702006 | None:intergenic | 10.0% |
| !! | ATAAATAAATAATACAATGG+TGG | - | chr3.1:4703158-4703177 | None:intergenic | 15.0% |
| !! | ATCTTTGTAATAATCATTTA+AGG | + | chr3.1:4701296-4701315 | MS.gene56256:intron | 15.0% |
| !! | CCATTGTATTATTTATTTAT+CGG | + | chr3.1:4703158-4703177 | MS.gene56256:intron | 15.0% |
| !!! | AAAATCATATTTTATGGTTT+TGG | + | chr3.1:4701999-4702018 | MS.gene56256:intron | 15.0% |
| !!! | TAGTTAAATAGTTTTATACA+TGG | - | chr3.1:4701470-4701489 | None:intergenic | 15.0% |
| !! | AATACTATTATGATCCAAAT+TGG | - | chr3.1:4701261-4701280 | None:intergenic | 20.0% |
| !! | ACATAATTGAATATAATCAC+AGG | + | chr3.1:4700278-4700297 | MS.gene56256:intron | 20.0% |
| !! | AGTATTTACACTAATCAATT+AGG | + | chr3.1:4703209-4703228 | MS.gene56256:intron | 20.0% |
| !! | ATACATTCTTATCTAACAAT+CGG | - | chr3.1:4701790-4701809 | None:intergenic | 20.0% |
| !! | ATTACTATAATACTTATGCA+TGG | - | chr3.1:4702724-4702743 | None:intergenic | 20.0% |
| !! | ATTTACATAACAAATTATGG+TGG | - | chr3.1:4702030-4702049 | None:intergenic | 20.0% |
| !! | ATTTGTATAGACAATACAAA+GGG | + | chr3.1:4700530-4700549 | MS.gene56256:intron | 20.0% |
| !! | CATATTAGTAAAAATCACAT+AGG | - | chr3.1:4700498-4700517 | None:intergenic | 20.0% |
| !! | CCAATTTACATAACAAATTA+TGG | - | chr3.1:4702033-4702052 | None:intergenic | 20.0% |
| !! | CCGATAAATAAATAATACAA+TGG | - | chr3.1:4703161-4703180 | None:intergenic | 20.0% |
| !! | GAATTTAAAGAGATGAAAAT+AGG | + | chr3.1:4702392-4702411 | MS.gene56256:intron | 20.0% |
| !! | GTATTTACACTAATCAATTA+GGG | + | chr3.1:4703210-4703229 | MS.gene56256:intron | 20.0% |
| !! | TACATCAATAACAATTAACA+GGG | - | chr3.1:4700973-4700992 | None:intergenic | 20.0% |
| !! | TATAAAACTATTTAACTACG+TGG | + | chr3.1:4701472-4701491 | MS.gene56256:intron | 20.0% |
| !! | TATTTGTATAGACAATACAA+AGG | + | chr3.1:4700529-4700548 | MS.gene56256:intron | 20.0% |
| !! | TGTACAAAAAAAACATAATC+AGG | - | chr3.1:4700140-4700159 | None:intergenic | 20.0% |
| !! | TTACATCAATAACAATTAAC+AGG | - | chr3.1:4700974-4700993 | None:intergenic | 20.0% |
| !!! | AAACTGATATATTTTTCGAA+AGG | - | chr3.1:4702572-4702591 | None:intergenic | 20.0% |
| !!! | AGAATTTATGTATTTGTTGT+TGG | + | chr3.1:4703384-4703403 | MS.gene56256:intron | 20.0% |
| !!! | AGAATTTTATTTTTCTCAAG+AGG | - | chr3.1:4702645-4702664 | None:intergenic | 20.0% |
| !!! | ATGAAACTTTTTTGAATAGA+AGG | + | chr3.1:4702340-4702359 | MS.gene56256:intron | 20.0% |
| !!! | ATTGATTTTTTGTTCACTAT+CGG | + | chr3.1:4700080-4700099 | MS.gene56256:intron | 20.0% |
| !!! | CAAAATTAGTAAAGTGTTAT+TGG | - | chr3.1:4700627-4700646 | None:intergenic | 20.0% |
| !!! | CCATAATTTGTTATGTAAAT+TGG | + | chr3.1:4702030-4702049 | MS.gene56256:intron | 20.0% |
| !!! | CTATGTGATTTTTACTAATA+TGG | + | chr3.1:4700496-4700515 | MS.gene56256:intron | 20.0% |
| !!! | GTTTTATTTGTTTAATTCGA+AGG | + | chr3.1:4703042-4703061 | MS.gene56256:intron | 20.0% |
| !!! | TACATAAATTCTAAGAAACA+AGG | - | chr3.1:4703376-4703395 | None:intergenic | 20.0% |
| !!! | TCTAAAATATGTTTCAAAGA+TGG | - | chr3.1:4701919-4701938 | None:intergenic | 20.0% |
| !!! | TGAGTTTGATTTTTTTTTTG+TGG | + | chr3.1:4700181-4700200 | MS.gene56256:intron | 20.0% |
| !!! | TTGTTTAAGGTAATATCAAA+AGG | + | chr3.1:4702471-4702490 | MS.gene56256:intron | 20.0% |
| !!! | TTTATTGAAGAGTTTAAGTT+AGG | + | chr3.1:4701336-4701355 | MS.gene56256:intron | 20.0% |
| ! | AAAATGAAAAGAGAAAGAGT+CGG | - | chr3.1:4701402-4701421 | None:intergenic | 25.0% |
| ! | AAAGCTTATAGAATGATAGT+TGG | - | chr3.1:4702529-4702548 | None:intergenic | 25.0% |
| ! | AATTATAGATAGATACCAGA+AGG | - | chr3.1:4700024-4700043 | None:intergenic | 25.0% |
| ! | TTAAAATGTCAATATGTCAC+AGG | + | chr3.1:4701507-4701526 | MS.gene56256:intron | 25.0% |
| ! | TTAATCCATACATTGGAATT+TGG | - | chr3.1:4703790-4703809 | None:intergenic | 25.0% |
| ! | TTACCTATAAAACACAAACA+TGG | + | chr3.1:4700209-4700228 | MS.gene56256:intron | 25.0% |
| !! | AAATCCTAATTTTATGACCA+TGG | + | chr3.1:4701693-4701712 | MS.gene56256:CDS | 25.0% |
| !! | AACGTTGTGTTCTAATTTTA+GGG | - | chr3.1:4702806-4702825 | None:intergenic | 25.0% |
| !! | AATTCTTTTCATCTAGATAC+TGG | + | chr3.1:4702070-4702089 | MS.gene56256:intron | 25.0% |
| !! | ACTATCATTCTATAAGCTTT+TGG | + | chr3.1:4702529-4702548 | MS.gene56256:intron | 25.0% |
| !! | ATTTTAGATGAGATAGAGAA+TGG | + | chr3.1:4701931-4701950 | MS.gene56256:CDS | 25.0% |
| !! | CTATCATTCTATAAGCTTTT+GGG | + | chr3.1:4702530-4702549 | MS.gene56256:intron | 25.0% |
| !! | TAACGTTGTGTTCTAATTTT+AGG | - | chr3.1:4702807-4702826 | None:intergenic | 25.0% |
| !! | TTTAATTTCGCAACATCTAT+AGG | - | chr3.1:4704138-4704157 | None:intergenic | 25.0% |
| !!! | AAATTCTGAACTTTTTTCAG+AGG | + | chr3.1:4701126-4701145 | MS.gene56256:intron | 25.0% |
| !!! | ATGTGCTTTAATTTTACTCT+TGG | + | chr3.1:4700717-4700736 | MS.gene56256:intron | 25.0% |
| !!! | GCATATTTTAATCCATACAT+TGG | - | chr3.1:4703797-4703816 | None:intergenic | 25.0% |
| !!! | TTTTCATTTTTCACTCACTA+GGG | + | chr3.1:4701412-4701431 | MS.gene56256:intron | 25.0% |
| AAATGAAAAGAGAAAGAGTC+GGG | - | chr3.1:4701401-4701420 | None:intergenic | 30.0% | |
| AACAAGATGTAGGAAGAAAT+TGG | - | chr3.1:4704026-4704045 | None:intergenic | 30.0% | |
| AACACACTTATCATGATATC+TGG | - | chr3.1:4700390-4700409 | None:intergenic | 30.0% | |
| ACAAATTTGTAGTTGTGCTT+GGG | + | chr3.1:4702316-4702335 | MS.gene56256:intron | 30.0% | |
| AGACACTTATCCTTTACTTA+GGG | + | chr3.1:4700562-4700581 | MS.gene56256:intron | 30.0% | |
| AGCAAACCAATACTAAAGAA+AGG | - | chr3.1:4703096-4703115 | None:intergenic | 30.0% | |
| AGTTTATTGAAGCAAGTTCT+AGG | + | chr3.1:4702830-4702849 | MS.gene56256:intron | 30.0% | |
| ATTGCTCCTTTCTTTAGTAT+TGG | + | chr3.1:4703087-4703106 | MS.gene56256:intron | 30.0% | |
| ATTGGTAAAACTTTCAAGCA+TGG | - | chr3.1:4701845-4701864 | None:intergenic | 30.0% | |
| GAAGAAAATCACAATGCTAT+AGG | - | chr3.1:4703487-4703506 | None:intergenic | 30.0% | |
| GGAATATAAGTCAATTGAGT+AGG | - | chr3.1:4702877-4702896 | None:intergenic | 30.0% | |
| GTTTCTGCATGAATTGTTTA+AGG | + | chr3.1:4702458-4702477 | MS.gene56256:intron | 30.0% | |
| TAAGTTAGGTGAAGAATTTG+AGG | + | chr3.1:4701350-4701369 | MS.gene56256:intron | 30.0% | |
| TAGAATATTAGATTCTAGCC+TGG | + | chr3.1:4703640-4703659 | MS.gene56256:intron | 30.0% | |
| TAGACACTTATCCTTTACTT+AGG | + | chr3.1:4700561-4700580 | MS.gene56256:intron | 30.0% | |
| TCATTGCTGAGAAATCAAAA+GGG | - | chr3.1:4700864-4700883 | None:intergenic | 30.0% | |
| TTATAGTAATGTAGTCCACT+AGG | + | chr3.1:4702734-4702753 | MS.gene56256:intron | 30.0% | |
| TTCTTCCAAATTCCAATGTA+TGG | + | chr3.1:4703782-4703801 | MS.gene56256:intron | 30.0% | |
| ! | ACTGCTGATTATCAAAGTTA+GGG | - | chr3.1:4701645-4701664 | None:intergenic | 30.0% |
| ! | AGTACTTTCATTTAGAACCA+TGG | + | chr3.1:4703409-4703428 | MS.gene56256:intron | 30.0% |
| ! | ATGGAATCATTTTCAAACCA+AGG | - | chr3.1:4702705-4702724 | None:intergenic | 30.0% |
| ! | GAAGTGTGTTATTGTTGTAT+TGG | + | chr3.1:4700355-4700374 | MS.gene56256:intron | 30.0% |
| ! | TAAGTGTGTTATTGTCATGT+TGG | + | chr3.1:4700400-4700419 | MS.gene56256:intron | 30.0% |
| ! | TACTGCTGATTATCAAAGTT+AGG | - | chr3.1:4701646-4701665 | None:intergenic | 30.0% |
| ! | TGCTATTTGCATTATATGTG+TGG | + | chr3.1:4700921-4700940 | MS.gene56256:intron | 30.0% |
| ! | TGTCCATGTTTGTGTTTTAT+AGG | - | chr3.1:4700215-4700234 | None:intergenic | 30.0% |
| ! | TTACATTTTGCTTGTGGTTA+CGG | + | chr3.1:4703297-4703316 | MS.gene56256:CDS | 30.0% |
| !! | ACATGCATGTTTTTATAAGC+TGG | + | chr3.1:4701023-4701042 | MS.gene56256:intron | 30.0% |
| !! | AGGAATATCCTTTTGAGAAT+TGG | - | chr3.1:4700004-4700023 | None:intergenic | 30.0% |
| !! | CTAATTTTGCTGTAGTCTTT+TGG | + | chr3.1:4700638-4700657 | MS.gene56256:intron | 30.0% |
| !! | CTTTTCATTTTTCACTCACT+AGG | + | chr3.1:4701411-4701430 | MS.gene56256:intron | 30.0% |
| !! | GAATTTTGACGATTCTAGTT+TGG | + | chr3.1:4703759-4703778 | MS.gene56256:intron | 30.0% |
| !!! | ATTTTTTTAGACGAGAAAGC+TGG | + | chr3.1:4700742-4700761 | MS.gene56256:intron | 30.0% |
| !!! | CATATTGACTTTTCGCAATA+TGG | + | chr3.1:4702264-4702283 | MS.gene56256:intron | 30.0% |
| !!! | CCAGCAAAACACAATTTTTT+GGG | + | chr3.1:4702937-4702956 | MS.gene56256:intron | 30.0% |
| !!! | TCTGGGAATAGGTTTTATTA+GGG | + | chr3.1:4701101-4701120 | MS.gene56256:intron | 30.0% |
| !!! | TTCTGGGAATAGGTTTTATT+AGG | + | chr3.1:4701100-4701119 | MS.gene56256:intron | 30.0% |
| AAAATCGCATAGGAAGATAC+TGG | - | chr3.1:4700463-4700482 | None:intergenic | 35.0% | |
| AAACATCTTTCTCAAGAAGC+TGG | - | chr3.1:4704179-4704198 | None:intergenic | 35.0% | |
| AAATTGGCAGCAACTACAAA+AGG | - | chr3.1:4701245-4701264 | None:intergenic | 35.0% | |
| AAGGATGAAGAAGATTCAGA+GGG | + | chr3.1:4703264-4703283 | MS.gene56256:CDS | 35.0% | |
| ACTTCCCTGAGTAACTTATA+AGG | + | chr3.1:4702901-4702920 | MS.gene56256:intron | 35.0% | |
| AGATCCATCATTCAATCAGA+TGG | + | chr3.1:4701567-4701586 | MS.gene56256:CDS | 35.0% | |
| AGCTTTCCATATCATGATAG+TGG | + | chr3.1:4701213-4701232 | MS.gene56256:intron | 35.0% | |
| AGTACTCTGCAAAATATGGA+TGG | + | chr3.1:4704105-4704124 | MS.gene56256:intron | 35.0% | |
| ATAAACCTCATCATTACAGC+AGG | - | chr3.1:4701961-4701980 | None:intergenic | 35.0% | |
| ATACCACTACAACAAGATGT+AGG | - | chr3.1:4704036-4704055 | None:intergenic | 35.0% | |
| ATATGCTCCTGATATATTCC+AGG | + | chr3.1:4703811-4703830 | MS.gene56256:intron | 35.0% | |
| ATCCTCCTTATAAGTTACTC+AGG | - | chr3.1:4702909-4702928 | None:intergenic | 35.0% | |
| ATCTAGATACTGGAATGATG+AGG | + | chr3.1:4702080-4702099 | MS.gene56256:intron | 35.0% | |
| ATGTATATGCTGTCTATCAC+AGG | + | chr3.1:4701804-4701823 | MS.gene56256:intron | 35.0% | |
| CTCATTGCTGAGAAATCAAA+AGG | - | chr3.1:4700865-4700884 | None:intergenic | 35.0% | |
| CTCTTCAAGCTGAACTTTAT+TGG | - | chr3.1:4701872-4701891 | None:intergenic | 35.0% | |
| CTGATTCCACTATCATGATA+TGG | - | chr3.1:4701222-4701241 | None:intergenic | 35.0% | |
| GACAAATTTGTAGTTGTGCT+TGG | + | chr3.1:4702315-4702334 | MS.gene56256:intron | 35.0% | |
| GACACTAGTAAAAATCGCAT+AGG | - | chr3.1:4700473-4700492 | None:intergenic | 35.0% | |
| GCCATATATATACAAGAACC+AGG | - | chr3.1:4703661-4703680 | None:intergenic | 35.0% | |
| GTAATATATGTAACACCGAC+AGG | - | chr3.1:4700434-4700453 | None:intergenic | 35.0% | |
| GTAATTAATTGTCTCGCAGT+TGG | + | chr3.1:4702423-4702442 | MS.gene56256:intron | 35.0% | |
| GTACTCTGCAAAATATGGAT+GGG | + | chr3.1:4704106-4704125 | MS.gene56256:intron | 35.0% | |
| TAAGGATGAAGAAGATTCAG+AGG | + | chr3.1:4703263-4703282 | MS.gene56256:CDS | 35.0% | |
| TCAAGCTGAACTTTATTGGA+CGG | - | chr3.1:4701868-4701887 | None:intergenic | 35.0% | |
| TCAGCCATGGTCATAAAATT+AGG | - | chr3.1:4701700-4701719 | None:intergenic | 35.0% | |
| TCCTCCTTATAAGTTACTCA+GGG | - | chr3.1:4702908-4702927 | None:intergenic | 35.0% | |
| TCTCAAAAGGATATTCCTTC+TGG | + | chr3.1:4700006-4700025 | MS.gene56256:CDS | 35.0% | |
| TGAACTAAACCTAACCACAT+CGG | - | chr3.1:4702368-4702387 | None:intergenic | 35.0% | |
| TGTCATCGTACAATGATTCT+GGG | + | chr3.1:4701084-4701103 | MS.gene56256:intron | 35.0% | |
| TTAGATGAGATAGAGAATGG+CGG | + | chr3.1:4701934-4701953 | MS.gene56256:CDS | 35.0% | |
| TTCTATTCCAAACAACTCCT+TGG | + | chr3.1:4702685-4702704 | MS.gene56256:intron | 35.0% | |
| TTGCAGTACTCTGCAAAATA+TGG | + | chr3.1:4704101-4704120 | MS.gene56256:intron | 35.0% | |
| TTTCAAACCAAGGAGTTGTT+TGG | - | chr3.1:4702695-4702714 | None:intergenic | 35.0% | |
| ! | ACTGCTTTACATTTTGCTTG+TGG | + | chr3.1:4703291-4703310 | MS.gene56256:CDS | 35.0% |
| ! | CATCTTGTTGTAGTGGTATT+TGG | + | chr3.1:4704037-4704056 | MS.gene56256:intron | 35.0% |
| ! | CCCAAAAAATTGTGTTTTGC+TGG | - | chr3.1:4702940-4702959 | None:intergenic | 35.0% |
| ! | CTGCTTCTTCTGAAAATTCT+GGG | + | chr3.1:4702160-4702179 | MS.gene56256:CDS | 35.0% |
| ! | GCCTGGTTCTTGTATATATA+TGG | + | chr3.1:4703657-4703676 | MS.gene56256:intron | 35.0% |
| ! | TTTGATTTCTCAGCAATGAG+TGG | + | chr3.1:4700865-4700884 | MS.gene56256:CDS | 35.0% |
| ! | TTTTGTAGTTGCTGCCAATT+TGG | + | chr3.1:4701244-4701263 | MS.gene56256:intron | 35.0% |
| !!! | GCCAGCAAAACACAATTTTT+TGG | + | chr3.1:4702936-4702955 | MS.gene56256:intron | 35.0% |
| !!! | GCGGGTGTTTTATTTCTTTA+AGG | - | chr3.1:4702766-4702785 | None:intergenic | 35.0% |
| !!! | TATTGTCGTCTTGGTTTTGT+TGG | + | chr3.1:4700304-4700323 | MS.gene56256:intron | 35.0% |
| AAGCATGCAACCTTTACACA+AGG | - | chr3.1:4703019-4703038 | None:intergenic | 40.0% | |
| ACAATGCTGCTATGCTCATT+TGG | + | chr3.1:4703614-4703633 | MS.gene56256:intron | 40.0% | |
| ACAGGCTGCAAAATTGCAAA+TGG | - | chr3.1:4701067-4701086 | None:intergenic | 40.0% | |
| AGCAAGTGAAGAATGTAACG+AGG | + | chr3.1:4703437-4703456 | MS.gene56256:intron | 40.0% | |
| AGCATGCAACCTTTACACAA+GGG | - | chr3.1:4703018-4703037 | None:intergenic | 40.0% | |
| AGTAATGTAGTCCACTAGGT+TGG | + | chr3.1:4702738-4702757 | MS.gene56256:intron | 40.0% | |
| AGTTCAGCTTGAAGAGAGAA+TGG | + | chr3.1:4701876-4701895 | MS.gene56256:CDS | 40.0% | |
| CACTTCACCTGGAATATATC+AGG | - | chr3.1:4703821-4703840 | None:intergenic | 40.0% | |
| CAGAATCATTGTACGATGAC+AGG | - | chr3.1:4701085-4701104 | None:intergenic | 40.0% | |
| CAGCTTCAGAAAACTTTGCA+TGG | + | chr3.1:4701595-4701614 | MS.gene56256:CDS | 40.0% | |
| CAGTAGTGTCATCATTGAGT+CGG | - | chr3.1:4703591-4703610 | None:intergenic | 40.0% | |
| CCAGATGAAACAGAAGATGT+GGG | + | chr3.1:4702183-4702202 | MS.gene56256:CDS | 40.0% | |
| CGGACAGTATTCATAATGCT+TGG | + | chr3.1:4703521-4703540 | MS.gene56256:intron | 40.0% | |
| CTGAACTTTATTGGACGGAT+TGG | - | chr3.1:4701863-4701882 | None:intergenic | 40.0% | |
| CTGTCATCGTACAATGATTC+TGG | + | chr3.1:4701083-4701102 | MS.gene56256:intron | 40.0% | |
| CTTCAGAAAACTTTGCATGG+AGG | + | chr3.1:4701598-4701617 | MS.gene56256:CDS | 40.0% | |
| CTTCATTATGCAGCAGGTTA+TGG | + | chr3.1:4703905-4703924 | MS.gene56256:CDS | 40.0% | |
| GAAATTGGCATGAACAGTTG+AGG | - | chr3.1:4704011-4704030 | None:intergenic | 40.0% | |
| GACTCAATGATGACACTACT+GGG | + | chr3.1:4703590-4703609 | MS.gene56256:intron | 40.0% | |
| GCAAAAAAAACTTCTGCAGC+GGG | - | chr3.1:4702784-4702803 | None:intergenic | 40.0% | |
| GGATCCAAGTATCAAGGAAT+TGG | + | chr3.1:4701528-4701547 | MS.gene56256:intron | 40.0% | |
| GGCAAAAAAAACTTCTGCAG+CGG | - | chr3.1:4702785-4702804 | None:intergenic | 40.0% | |
| GTATCTTTCATCCATGCAAC+AGG | + | chr3.1:4701663-4701682 | MS.gene56256:CDS | 40.0% | |
| GTTCATCATACTGCTAGTGT+TGG | + | chr3.1:4702225-4702244 | MS.gene56256:CDS | 40.0% | |
| TAGATACTGGAATGATGAGG+AGG | + | chr3.1:4702083-4702102 | MS.gene56256:intron | 40.0% | |
| TCAGCCAATTCCTTGATACT+TGG | - | chr3.1:4701535-4701554 | None:intergenic | 40.0% | |
| TCAGCCATCTGATTGAATGA+TGG | - | chr3.1:4701574-4701593 | None:intergenic | 40.0% | |
| TCCCTGAGTAACTTATAAGG+AGG | + | chr3.1:4702904-4702923 | MS.gene56256:intron | 40.0% | |
| TCTTCACTTGCTTTACACCA+TGG | - | chr3.1:4703429-4703448 | None:intergenic | 40.0% | |
| TGCTGAGAAATCAAAAGGGT+TGG | - | chr3.1:4700860-4700879 | None:intergenic | 40.0% | |
| TGGAGCAAAAGTAGATGCTT+TGG | + | chr3.1:4703862-4703881 | MS.gene56256:CDS | 40.0% | |
| TTGTGTATGCCCTTGTGTAA+AGG | + | chr3.1:4703006-4703025 | MS.gene56256:intron | 40.0% | |
| TTTATAAGCTGGTCATGCGT+TGG | + | chr3.1:4701034-4701053 | MS.gene56256:intron | 40.0% | |
| ! | CGTACAATGATTCTGGGAAT+AGG | + | chr3.1:4701090-4701109 | MS.gene56256:intron | 40.0% |
| ! | CTTCCTACATCTTGTTGTAG+TGG | + | chr3.1:4704030-4704049 | MS.gene56256:intron | 40.0% |
| ! | GCTGCTTCTTCTGAAAATTC+TGG | + | chr3.1:4702159-4702178 | MS.gene56256:CDS | 40.0% |
| ! | GGACTTTTGAACTCATCGTA+TGG | + | chr3.1:4701371-4701390 | MS.gene56256:intron | 40.0% |
| !! | AGCTTTTGGGAGCTTCATAT+TGG | + | chr3.1:4702543-4702562 | MS.gene56256:intron | 40.0% |
| !! | GCTTTTGGGAGCTTCATATT+GGG | + | chr3.1:4702544-4702563 | MS.gene56256:intron | 40.0% |
| !! | TAAAGAACGCTTTTTGCCGA+CGG | - | chr3.1:4701161-4701180 | None:intergenic | 40.0% |
| !! | TCTTTAAGGTACCAACCTAG+TGG | - | chr3.1:4702752-4702771 | None:intergenic | 40.0% |
| !!! | GAGGAGGTTTTGAAGAAGTT+GGG | + | chr3.1:4702099-4702118 | MS.gene56256:CDS | 40.0% |
| !!! | TGAGGAGGTTTTGAAGAAGT+TGG | + | chr3.1:4702098-4702117 | MS.gene56256:CDS | 40.0% |
| AAGTTACTCAGGGAAGTCTG+TGG | - | chr3.1:4702898-4702917 | None:intergenic | 45.0% | |
| AATACTGTCCGAGTTCACTG+TGG | - | chr3.1:4703512-4703531 | None:intergenic | 45.0% | |
| ACAGCTCTTCATTATGCAGC+AGG | + | chr3.1:4703899-4703918 | MS.gene56256:CDS | 45.0% | |
| AGAGAGAATGGCACGCATAA+AGG | + | chr3.1:4701888-4701907 | MS.gene56256:CDS | 45.0% | |
| ATTATGCAGCAGGTTATGGC+AGG | + | chr3.1:4703909-4703928 | MS.gene56256:CDS | 45.0% | |
| ATTTGCCATGACCTGTTGCA+TGG | - | chr3.1:4701677-4701696 | None:intergenic | 45.0% | |
| CAAGCATGGAAGACATCGAT+GGG | - | chr3.1:4701831-4701850 | None:intergenic | 45.0% | |
| CATCTTTCTCAAGAAGCTGG+AGG | - | chr3.1:4704176-4704195 | None:intergenic | 45.0% | |
| CCCACATCTTCTGTTTCATC+TGG | - | chr3.1:4702186-4702205 | None:intergenic | 45.0% | |
| CGACTCAATGATGACACTAC+TGG | + | chr3.1:4703589-4703608 | MS.gene56256:intron | 45.0% | |
| GCCAGATGAAACAGAAGATG+TGG | + | chr3.1:4702182-4702201 | MS.gene56256:CDS | 45.0% | |
| GTCACAGGATCCAAGTATCA+AGG | + | chr3.1:4701522-4701541 | MS.gene56256:intron | 45.0% | |
| GTGAAGAATGTAACGAGGCT+CGG | + | chr3.1:4703442-4703461 | MS.gene56256:intron | 45.0% | |
| GTGCAGTACACCCTAAGTAA+AGG | - | chr3.1:4700575-4700594 | None:intergenic | 45.0% | |
| TCAAGCATGGAAGACATCGA+TGG | - | chr3.1:4701832-4701851 | None:intergenic | 45.0% | |
| TCTAACAAGCCCTCTCTAGA+AGG | - | chr3.1:4703715-4703734 | None:intergenic | 45.0% | |
| TGAAGAATGTAACGAGGCTC+GGG | + | chr3.1:4703443-4703462 | MS.gene56256:intron | 45.0% | |
| TTATGGCAGGAAGGAATGTG+TGG | + | chr3.1:4703922-4703941 | MS.gene56256:CDS | 45.0% | |
| TTCATCCATGCAACAGGTCA+TGG | + | chr3.1:4701669-4701688 | MS.gene56256:CDS | 45.0% | |
| TTCATCCTTATCAGCACCAG+AGG | - | chr3.1:4703253-4703272 | None:intergenic | 45.0% | |
| TTCTTCCACCACAGTGAACT+CGG | + | chr3.1:4703501-4703520 | MS.gene56256:intron | 45.0% | |
| ! | CAATGGTGGAACTTCACAAC+AGG | - | chr3.1:4703144-4703163 | None:intergenic | 45.0% |
| ! | GAGAAATCAAAAGGGTTGGC+TGG | - | chr3.1:4700856-4700875 | None:intergenic | 45.0% |
| !! | AAAGAACGCTTTTTGCCGAC+GGG | - | chr3.1:4701160-4701179 | None:intergenic | 45.0% |
| !! | AAGAAGTTGGGACTAGCCAT+GGG | + | chr3.1:4702111-4702130 | MS.gene56256:CDS | 45.0% |
| !! | CACAGGTGTTATTGTCGTCT+TGG | + | chr3.1:4700295-4700314 | MS.gene56256:intron | 45.0% |
| !! | TGCTAGTGTTGGTGACATTG+AGG | + | chr3.1:4702236-4702255 | MS.gene56256:CDS | 45.0% |
| !! | TTGAATAGAAGGTGCCGATG+TGG | + | chr3.1:4702351-4702370 | MS.gene56256:intron | 45.0% |
| !!! | CGTCTTGGTTTTGTTGGTGT+TGG | + | chr3.1:4700310-4700329 | MS.gene56256:intron | 45.0% |
| AGAAGGAGGAGAGGGCTAAA+TGG | - | chr3.1:4703698-4703717 | None:intergenic | 50.0% | |
| AGCTGGTCATGCGTTGGATT+TGG | + | chr3.1:4701040-4701059 | MS.gene56256:intron | 50.0% | |
| ATATGTAACACCGACAGGCG+TGG | - | chr3.1:4700429-4700448 | None:intergenic | 50.0% | |
| CCTGCATCAATGCATTACCC+AGG | - | chr3.1:4701726-4701745 | None:intergenic | 50.0% | |
| ! | AACAAGCCCTCTCTAGAAGG+AGG | - | chr3.1:4703712-4703731 | None:intergenic | 50.0% |
| ! | ACACTGCAGCACCGTTTTCA+AGG | - | chr3.1:4703955-4703974 | None:intergenic | 50.0% |
| ! | AGACGAGAAAGCTGGTTCAG+CGG | + | chr3.1:4700750-4700769 | MS.gene56256:intron | 50.0% |
| ! | CCTGGGTAATGCATTGATGC+AGG | + | chr3.1:4701723-4701742 | MS.gene56256:CDS | 50.0% |
| ! | GTGGCCTTGCTCCTTGAAAA+CGG | + | chr3.1:4703941-4703960 | MS.gene56256:CDS | 50.0% |
| ! | TTTTGCTTGTGGTTACGGCG+AGG | + | chr3.1:4703302-4703321 | MS.gene56256:CDS | 50.0% |
| !! | AGCACCGTTTTCAAGGAGCA+AGG | - | chr3.1:4703948-4703967 | None:intergenic | 50.0% |
| !! | CTACTTTTGCTCCAGCCTCA+AGG | - | chr3.1:4703856-4703875 | None:intergenic | 50.0% |
| !! | GAAGAAGTTGGGACTAGCCA+TGG | + | chr3.1:4702110-4702129 | MS.gene56256:CDS | 50.0% |
| !! | TAGAAGGTGCCGATGTGGTT+AGG | + | chr3.1:4702356-4702375 | MS.gene56256:intron | 50.0% |
| ACATCCTCGAACGCAACTCC+CGG | + | chr3.1:4700796-4700815 | MS.gene56256:CDS | 55.0% | |
| ACCAGTCCCAGGTGGAAAAC+CGG | - | chr3.1:4700830-4700849 | None:intergenic | 55.0% | |
| ACTGTCCGAGTTCACTGTGG+TGG | - | chr3.1:4703509-4703528 | None:intergenic | 55.0% | |
| AGAAGCAGCTGCATCTCCAG+AGG | - | chr3.1:4702148-4702167 | None:intergenic | 55.0% | |
| AGAGGTTGGAGGAATGCCCA+TGG | - | chr3.1:4702130-4702149 | None:intergenic | 55.0% | |
| ATGGGCATTCCTCCAACCTC+TGG | + | chr3.1:4702129-4702148 | MS.gene56256:CDS | 55.0% | |
| ATGTTGGACACCACGCCTGT+CGG | + | chr3.1:4700416-4700435 | MS.gene56256:intron | 55.0% | |
| GCGGTCCTGCTGTAATGATG+AGG | + | chr3.1:4701953-4701972 | MS.gene56256:CDS | 55.0% | |
| TCAGAGGTCTTCACACCCGT+CGG | + | chr3.1:4701142-4701161 | MS.gene56256:intron | 55.0% | |
| TGCAGCAGGTTATGGCAGGA+AGG | + | chr3.1:4703913-4703932 | MS.gene56256:CDS | 55.0% | |
| TTAGGGAGACCACCATCCTG+TGG | - | chr3.1:4701628-4701647 | None:intergenic | 55.0% | |
| TTGGCTGGAAAACCAGTCCC+AGG | - | chr3.1:4700841-4700860 | None:intergenic | 55.0% | |
| ! | CCCTCTCCTCCTTCTAGAGA+GGG | + | chr3.1:4703703-4703722 | MS.gene56256:intron | 55.0% |
| ! | CCCTCTCTAGAAGGAGGAGA+GGG | - | chr3.1:4703706-4703725 | None:intergenic | 55.0% |
| ! | TTGAAAGCTGCGCTAGCCTC+TGG | + | chr3.1:4703234-4703253 | MS.gene56256:CDS | 55.0% |
| !! | GCTAGCCTCTGGTGCTGATA+AGG | + | chr3.1:4703245-4703264 | MS.gene56256:CDS | 55.0% |
| !! | TTTGCATGGAGGAGCACCAC+AGG | + | chr3.1:4701609-4701628 | MS.gene56256:CDS | 55.0% |
| ATGACCATGGCTGAGCGCCT+GGG | + | chr3.1:4701706-4701725 | MS.gene56256:CDS | 60.0% | |
| ATTACCCAGGCGCTCAGCCA+TGG | - | chr3.1:4701713-4701732 | None:intergenic | 60.0% | |
| GAGCTTGCGCACACTTCACC+TGG | - | chr3.1:4703832-4703851 | None:intergenic | 60.0% | |
| GCAGCTGCATCTCCAGAGGT+TGG | - | chr3.1:4702144-4702163 | None:intergenic | 60.0% | |
| GCTGCATCTCCAGAGGTTGG+AGG | - | chr3.1:4702141-4702160 | None:intergenic | 60.0% | |
| GCTGGAAAACCAGTCCCAGG+TGG | - | chr3.1:4700838-4700857 | None:intergenic | 60.0% | |
| GTGTGCGCAAGCTCTCCTTG+AGG | + | chr3.1:4703838-4703857 | MS.gene56256:CDS | 60.0% | |
| TATGACCATGGCTGAGCGCC+TGG | + | chr3.1:4701705-4701724 | MS.gene56256:CDS | 60.0% | |
| TGGAAAACCGGTCCCAGGTC+CGG | - | chr3.1:4700818-4700837 | None:intergenic | 60.0% | |
| ! | GCCCTCTCCTCCTTCTAGAG+AGG | + | chr3.1:4703702-4703721 | MS.gene56256:intron | 60.0% |
| ! | GCCCTCTCTAGAAGGAGGAG+AGG | - | chr3.1:4703707-4703726 | None:intergenic | 60.0% |
| !! | ACCGGTTTTCCACCTGGGAC+TGG | + | chr3.1:4700826-4700845 | MS.gene56256:CDS | 60.0% |
| !! | CATGGAGGAGCACCACAGGA+TGG | + | chr3.1:4701613-4701632 | MS.gene56256:CDS | 60.0% |
| !! | CTGGGACCGGTTTTCCACCT+GGG | + | chr3.1:4700821-4700840 | MS.gene56256:CDS | 60.0% |
| AGGTCCGGGAGTTGCGTTCG+AGG | - | chr3.1:4700803-4700822 | None:intergenic | 65.0% | |
| CCAGGTGGAAAACCGGTCCC+AGG | - | chr3.1:4700823-4700842 | None:intergenic | 65.0% | |
| CGAACGCAACTCCCGGACCT+GGG | + | chr3.1:4700803-4700822 | MS.gene56256:CDS | 65.0% | |
| GCGCAAGCTCTCCTTGAGGC+TGG | + | chr3.1:4703842-4703861 | MS.gene56256:CDS | 65.0% | |
| GGAAAACCGGTCCCAGGTCC+GGG | - | chr3.1:4700817-4700836 | None:intergenic | 65.0% | |
| TCGAACGCAACTCCCGGACC+TGG | + | chr3.1:4700802-4700821 | MS.gene56256:CDS | 65.0% | |
| !! | CCTGGGACCGGTTTTCCACC+TGG | + | chr3.1:4700820-4700839 | MS.gene56256:CDS | 65.0% |
| !! | GGAGGAGCACCACAGGATGG+TGG | + | chr3.1:4701616-4701635 | MS.gene56256:CDS | 65.0% |
| GCAACTCCCGGACCTGGGAC+CGG | + | chr3.1:4700808-4700827 | MS.gene56256:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 4699994 | 4704206 | 4699994 | ID=MS.gene56256 |
| chr3.1 | mRNA | 4699994 | 4704206 | 4699994 | ID=MS.gene56256.t1;Parent=MS.gene56256 |
| chr3.1 | exon | 4699994 | 4700027 | 4699994 | ID=MS.gene56256.t1.exon1;Parent=MS.gene56256.t1 |
| chr3.1 | CDS | 4699994 | 4700027 | 4699994 | ID=cds.MS.gene56256.t1;Parent=MS.gene56256.t1 |
| chr3.1 | exon | 4700752 | 4700897 | 4700752 | ID=MS.gene56256.t1.exon2;Parent=MS.gene56256.t1 |
| chr3.1 | CDS | 4700752 | 4700897 | 4700752 | ID=cds.MS.gene56256.t1;Parent=MS.gene56256.t1 |
| chr3.1 | exon | 4701529 | 4701744 | 4701529 | ID=MS.gene56256.t1.exon3;Parent=MS.gene56256.t1 |
| chr3.1 | CDS | 4701529 | 4701744 | 4701529 | ID=cds.MS.gene56256.t1;Parent=MS.gene56256.t1 |
| chr3.1 | exon | 4701826 | 4701974 | 4701826 | ID=MS.gene56256.t1.exon4;Parent=MS.gene56256.t1 |
| chr3.1 | CDS | 4701826 | 4701974 | 4701826 | ID=cds.MS.gene56256.t1;Parent=MS.gene56256.t1 |
| chr3.1 | exon | 4702086 | 4702257 | 4702086 | ID=MS.gene56256.t1.exon5;Parent=MS.gene56256.t1 |
| chr3.1 | CDS | 4702086 | 4702257 | 4702086 | ID=cds.MS.gene56256.t1;Parent=MS.gene56256.t1 |
| chr3.1 | exon | 4703231 | 4703323 | 4703231 | ID=MS.gene56256.t1.exon6;Parent=MS.gene56256.t1 |
| chr3.1 | CDS | 4703231 | 4703323 | 4703231 | ID=cds.MS.gene56256.t1;Parent=MS.gene56256.t1 |
| chr3.1 | exon | 4703833 | 4703972 | 4703833 | ID=MS.gene56256.t1.exon7;Parent=MS.gene56256.t1 |
| chr3.1 | CDS | 4703833 | 4703972 | 4703833 | ID=cds.MS.gene56256.t1;Parent=MS.gene56256.t1 |
| chr3.1 | exon | 4704107 | 4704206 | 4704107 | ID=MS.gene56256.t1.exon8;Parent=MS.gene56256.t1 |
| chr3.1 | CDS | 4704107 | 4704206 | 4704107 | ID=cds.MS.gene56256.t1;Parent=MS.gene56256.t1 |
| Gene Sequence |
| Protein sequence |
