Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013129.t1 | XP_003602847.1 | 83.8 | 296 | 39 | 4 | 1 | 293 | 1 | 290 | 1.80E-126 | 462.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013129.t1 | Q08935 | 30.6 | 180 | 114 | 4 | 93 | 263 | 88 | 265 | 2.3e-18 | 94.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013129.t1 | G7J4G2 | 83.8 | 296 | 39 | 4 | 1 | 293 | 1 | 290 | 1.3e-126 | 462.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013129 | MS.gene56256 | PPI |
| MS.gene51627 | MS.gene013129 | PPI |
| MS.gene009458 | MS.gene013129 | PPI |
| MS.gene013129 | MS.gene63514 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013129.t1 | MTR_3g099590 | 86.824 | 296 | 30 | 4 | 1 | 293 | 1 | 290 | 2.56e-178 | 493 |
| MS.gene013129.t1 | MTR_5g030020 | 34.759 | 187 | 116 | 2 | 94 | 278 | 98 | 280 | 3.28e-26 | 105 |
| MS.gene013129.t1 | MTR_4g104470 | 32.787 | 183 | 108 | 7 | 83 | 259 | 116 | 289 | 5.74e-25 | 101 |
| MS.gene013129.t1 | MTR_1g045510 | 36.872 | 179 | 100 | 7 | 92 | 264 | 113 | 284 | 5.81e-25 | 101 |
| MS.gene013129.t1 | MTR_3g075500 | 27.917 | 240 | 154 | 8 | 33 | 260 | 48 | 280 | 3.65e-24 | 99.4 |
| MS.gene013129.t1 | MTR_3g075500 | 29.442 | 197 | 123 | 7 | 66 | 250 | 78 | 270 | 3.11e-21 | 91.3 |
| MS.gene013129.t1 | MTR_7g106440 | 28.270 | 237 | 140 | 9 | 45 | 259 | 57 | 285 | 3.71e-20 | 89.0 |
| MS.gene013129.t1 | MTR_1g056520 | 30.055 | 183 | 119 | 5 | 84 | 259 | 100 | 280 | 4.76e-20 | 88.6 |
| MS.gene013129.t1 | MTR_1g064230 | 28.000 | 250 | 147 | 8 | 34 | 262 | 35 | 272 | 4.02e-17 | 79.7 |
| MS.gene013129.t1 | MTR_3g027140 | 30.088 | 226 | 143 | 9 | 45 | 259 | 11 | 232 | 6.96e-17 | 78.6 |
| MS.gene013129.t1 | MTR_1g061870 | 27.586 | 174 | 118 | 5 | 92 | 259 | 194 | 365 | 3.20e-14 | 73.2 |
| MS.gene013129.t1 | MTR_1g061870 | 26.437 | 174 | 124 | 3 | 94 | 267 | 105 | 274 | 1.61e-11 | 64.7 |
| MS.gene013129.t1 | MTR_7g102730 | 25.683 | 183 | 124 | 5 | 92 | 264 | 189 | 369 | 4.10e-14 | 72.8 |
| MS.gene013129.t1 | MTR_7g094660 | 28.495 | 186 | 120 | 6 | 94 | 270 | 643 | 824 | 4.95e-14 | 72.8 |
| MS.gene013129.t1 | MTR_1g097440 | 28.649 | 185 | 117 | 6 | 92 | 264 | 209 | 390 | 7.86e-13 | 68.9 |
| MS.gene013129.t1 | MTR_6g040190 | 28.108 | 185 | 118 | 6 | 92 | 264 | 200 | 381 | 2.15e-12 | 67.8 |
| MS.gene013129.t1 | MTR_5g097580 | 26.380 | 163 | 108 | 5 | 91 | 244 | 5 | 164 | 7.55e-12 | 65.9 |
| MS.gene013129.t1 | MTR_5g097580 | 26.380 | 163 | 108 | 5 | 91 | 244 | 5 | 164 | 7.62e-12 | 65.9 |
| MS.gene013129.t1 | MTR_7g013730 | 34.444 | 90 | 55 | 2 | 89 | 177 | 37 | 123 | 2.31e-11 | 63.2 |
| MS.gene013129.t1 | MTR_2g026180 | 25.153 | 163 | 108 | 5 | 93 | 244 | 5 | 164 | 3.95e-11 | 63.5 |
| MS.gene013129.t1 | MTR_4g122650 | 28.571 | 161 | 103 | 7 | 93 | 249 | 89 | 241 | 4.30e-11 | 63.9 |
| MS.gene013129.t1 | MTR_1g019150 | 27.222 | 180 | 116 | 3 | 97 | 264 | 216 | 392 | 5.50e-11 | 63.5 |
| MS.gene013129.t1 | MTR_6g477870 | 36.585 | 82 | 51 | 1 | 92 | 172 | 95 | 176 | 8.61e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013129.t1 | AT4G09040 | 63.043 | 184 | 66 | 2 | 87 | 268 | 89 | 272 | 3.74e-78 | 240 |
| MS.gene013129.t1 | AT4G09040 | 58.000 | 200 | 82 | 2 | 71 | 268 | 13 | 212 | 1.37e-77 | 236 |
| MS.gene013129.t1 | AT2G35410 | 32.016 | 253 | 157 | 3 | 34 | 271 | 28 | 280 | 4.99e-37 | 134 |
| MS.gene013129.t1 | AT1G60000 | 33.702 | 181 | 106 | 6 | 92 | 265 | 85 | 258 | 5.30e-23 | 95.5 |
| MS.gene013129.t1 | AT3G52380 | 31.633 | 196 | 114 | 7 | 75 | 259 | 106 | 292 | 5.41e-23 | 97.1 |
| MS.gene013129.t1 | AT5G50250 | 32.370 | 173 | 105 | 6 | 93 | 259 | 114 | 280 | 3.76e-22 | 94.0 |
| MS.gene013129.t1 | AT4G24770 | 31.609 | 174 | 107 | 6 | 92 | 259 | 150 | 317 | 1.71e-21 | 92.8 |
| MS.gene013129.t1 | AT4G24770 | 31.609 | 174 | 107 | 6 | 92 | 259 | 150 | 317 | 1.71e-21 | 92.8 |
| MS.gene013129.t1 | AT2G37220 | 30.526 | 190 | 107 | 5 | 93 | 260 | 92 | 278 | 5.15e-18 | 82.4 |
| MS.gene013129.t1 | AT3G16380 | 30.055 | 183 | 117 | 4 | 91 | 264 | 201 | 381 | 1.96e-15 | 76.6 |
| MS.gene013129.t1 | AT4G34110 | 28.962 | 183 | 118 | 4 | 92 | 264 | 215 | 395 | 1.20e-14 | 74.3 |
| MS.gene013129.t1 | AT2G36660 | 26.776 | 183 | 122 | 5 | 92 | 264 | 201 | 381 | 4.77e-14 | 72.8 |
| MS.gene013129.t1 | AT2G36660 | 26.901 | 171 | 119 | 4 | 94 | 264 | 114 | 278 | 3.62e-11 | 63.9 |
| MS.gene013129.t1 | AT3G52150 | 29.545 | 176 | 113 | 5 | 93 | 259 | 77 | 250 | 2.27e-12 | 66.2 |
| MS.gene013129.t1 | AT3G52150 | 29.545 | 176 | 113 | 5 | 93 | 259 | 77 | 250 | 2.27e-12 | 66.2 |
| MS.gene013129.t1 | AT2G23350 | 27.411 | 197 | 121 | 5 | 83 | 264 | 216 | 405 | 2.44e-12 | 67.4 |
| MS.gene013129.t1 | AT1G01080 | 26.667 | 195 | 122 | 5 | 80 | 259 | 96 | 284 | 5.99e-12 | 65.5 |
| MS.gene013129.t1 | AT1G71770 | 27.568 | 185 | 122 | 4 | 90 | 264 | 237 | 419 | 1.66e-11 | 65.1 |
| MS.gene013129.t1 | AT1G71770 | 27.568 | 185 | 122 | 4 | 90 | 264 | 237 | 419 | 1.66e-11 | 65.1 |
| MS.gene013129.t1 | AT5G41690 | 28.767 | 219 | 118 | 7 | 65 | 251 | 34 | 246 | 2.81e-11 | 64.3 |
| MS.gene013129.t1 | AT5G41690 | 28.767 | 219 | 118 | 7 | 65 | 251 | 34 | 246 | 2.81e-11 | 64.3 |
| MS.gene013129.t1 | AT5G41690 | 28.767 | 219 | 118 | 7 | 65 | 251 | 34 | 246 | 2.81e-11 | 64.3 |
| MS.gene013129.t1 | AT4G19610 | 27.982 | 218 | 142 | 9 | 52 | 257 | 558 | 772 | 3.03e-11 | 64.3 |
| MS.gene013129.t1 | AT1G22760 | 28.351 | 194 | 123 | 7 | 83 | 264 | 220 | 409 | 5.70e-11 | 63.5 |
Find 0 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTAGAAAATAGTTATTATT+AGG | + | 21144:7206-7225 | MS.gene013129:intron | 15.0% |
| !!! | TTTTTTGTTTGTTTTTGTTT+TGG | + | 21144:6674-6693 | MS.gene013129:intron | 15.0% |
| !! | ACAAACAAGTTATATGTTAT+TGG | - | 21144:7620-7639 | MS.gene013129:intergenic | 20.0% |
| !! | AGATAATTATCTTAGTTACT+TGG | - | 21144:7295-7314 | MS.gene013129:intergenic | 20.0% |
| !! | AGTTATTATTAGGTGAAAAT+TGG | + | 21144:7216-7235 | MS.gene013129:intron | 20.0% |
| !! | ATTATTTAGTATTGTGACAT+TGG | + | 21144:7936-7955 | MS.gene013129:intron | 20.0% |
| !! | CATATTTGATATTTATTACG+CGG | - | 21144:7553-7572 | MS.gene013129:intergenic | 20.0% |
| !! | CCAAATTCAAATTAACAAAT+TGG | - | 21144:7847-7866 | MS.gene013129:intergenic | 20.0% |
| !! | TATTATGTTCAATTCATTTC+AGG | + | 21144:6622-6641 | MS.gene013129:intron | 20.0% |
| !!! | ATATTTCTGCAGAATTTTAT+GGG | + | 21144:7967-7986 | MS.gene013129:intron | 20.0% |
| !!! | CCAATTTGTTAATTTGAATT+TGG | + | 21144:7844-7863 | MS.gene013129:intron | 20.0% |
| ! | ATAAAAAAACCTCAACATCA+AGG | - | 21144:6588-6607 | MS.gene013129:intergenic | 25.0% |
| ! | CAAACATTTCTTATGAAGTA+AGG | + | 21144:7642-7661 | MS.gene013129:CDS | 25.0% |
| ! | CAGATAAACACATCAAATTA+AGG | - | 21144:7496-7515 | MS.gene013129:intergenic | 25.0% |
| ! | GAATATGATACAATTAGAGT+AGG | + | 21144:7254-7273 | MS.gene013129:intron | 25.0% |
| ! | GATTTGATAGAAATGGTTTA+CGG | - | 21144:7328-7347 | MS.gene013129:intergenic | 25.0% |
| ! | GTATAATAAGAACAGAAACA+GGG | + | 21144:6720-6739 | MS.gene013129:CDS | 25.0% |
| ! | TATAATAAGAACAGAAACAG+GGG | + | 21144:6721-6740 | MS.gene013129:CDS | 25.0% |
| ! | TGTATAATAAGAACAGAAAC+AGG | + | 21144:6719-6738 | MS.gene013129:CDS | 25.0% |
| ! | TGTTAGATATAGTTACTAGT+TGG | - | 21144:7352-7371 | MS.gene013129:intergenic | 25.0% |
| ! | TTGTTTGGTTGTGATAATAA+GGG | - | 21144:6395-6414 | MS.gene013129:intergenic | 25.0% |
| !! | AACGTGTGAATTTTATAGAT+AGG | + | 21144:6889-6908 | MS.gene013129:intron | 25.0% |
| !! | AAGAGTTGGTTATTATTACA+TGG | - | 21144:6294-6313 | MS.gene013129:intergenic | 25.0% |
| !! | ACGTGTGAATTTTATAGATA+GGG | + | 21144:6890-6909 | MS.gene013129:intron | 25.0% |
| !! | CGTTCTTTGTTTGAAAAATA+TGG | + | 21144:6556-6575 | MS.gene013129:CDS | 25.0% |
| !! | GATTTGATAGAATTGGTTTA+AGG | + | 21144:7181-7200 | MS.gene013129:intron | 25.0% |
| !! | GTAATTTTCTATGTCAAACT+CGG | + | 21144:7139-7158 | MS.gene013129:intron | 25.0% |
| !! | TATTATTACATGGTGTTTTG+TGG | - | 21144:6284-6303 | MS.gene013129:intergenic | 25.0% |
| !!! | AAATTTTAACCGCAATTTCT+TGG | + | 21144:7897-7916 | MS.gene013129:intron | 25.0% |
| !!! | AATTGTTGTTATTTCGCAAT+AGG | + | 21144:7004-7023 | MS.gene013129:intron | 25.0% |
| !!! | GATATTTCTGCAGAATTTTA+TGG | + | 21144:7966-7985 | MS.gene013129:intron | 25.0% |
| ACAAGACAAAAATCGAAAAG+AGG | - | 21144:6841-6860 | MS.gene013129:intergenic | 30.0% | |
| ACAGAGAGATTTGATAGAAT+TGG | + | 21144:7174-7193 | MS.gene013129:intron | 30.0% | |
| AGCCTAAAAAGGAGAAAATA+CGG | + | 21144:7576-7595 | MS.gene013129:CDS | 30.0% | |
| AGTTGGAGATTTGATAGAAA+TGG | - | 21144:7335-7354 | MS.gene013129:intergenic | 30.0% | |
| ATCAACAATGTTGTAACTTG+CGG | - | 21144:7109-7128 | MS.gene013129:intergenic | 30.0% | |
| ATGGATAAACGAAGAGAATA+AGG | - | 21144:6352-6371 | MS.gene013129:intergenic | 30.0% | |
| ATTGAAAGCTTAAACCCAAA+AGG | - | 21144:6700-6719 | MS.gene013129:intergenic | 30.0% | |
| CAAATATGCTAAGCCTAAAA+AGG | + | 21144:7565-7584 | MS.gene013129:CDS | 30.0% | |
| CAAGACAAAAATCGAAAAGA+GGG | - | 21144:6840-6859 | MS.gene013129:intergenic | 30.0% | |
| CTTAGTTACTTGGATTATGA+AGG | - | 21144:7285-7304 | MS.gene013129:intergenic | 30.0% | |
| GTTGTTTGGTTGTGATAATA+AGG | - | 21144:6396-6415 | MS.gene013129:intergenic | 30.0% | |
| TTTGTGGAAGATAATTGAGT+TGG | - | 21144:6268-6287 | MS.gene013129:intergenic | 30.0% | |
| ! | TGAAATTTTCACACCCATTA+GGG | + | 21144:7381-7400 | MS.gene013129:intron | 30.0% |
| ! | TTGATAGAATTGGTTTAAGG+TGG | + | 21144:7184-7203 | MS.gene013129:intron | 30.0% |
| ! | TTTTTATGTGTCTTCTGTTG+TGG | + | 21144:7443-7462 | MS.gene013129:intron | 30.0% |
| !!! | CTCAAGGAGTTTTTTGATTT+GGG | + | 21144:7674-7693 | MS.gene013129:CDS | 30.0% |
| !!! | TGTTTTTGTTTTGGCCTTTT+GGG | + | 21144:6683-6702 | MS.gene013129:intron | 30.0% |
| !!! | TTGTTTTTGTTTTGGCCTTT+TGG | + | 21144:6682-6701 | MS.gene013129:intron | 30.0% |
| AACGAAGAGAATAAGGATTG+AGG | - | 21144:6345-6364 | MS.gene013129:intergenic | 35.0% | |
| ACGAAGAGAATAAGGATTGA+GGG | - | 21144:6344-6363 | MS.gene013129:intergenic | 35.0% | |
| AGCTTCTTTCTTAGACTTGA+AGG | - | 21144:7774-7793 | MS.gene013129:intergenic | 35.0% | |
| AGTAGAATGAGAGAGTTGTT+TGG | - | 21144:6410-6429 | MS.gene013129:intergenic | 35.0% | |
| AGTTACCTTTCCTTCAAACT+CGG | - | 21144:7810-7829 | MS.gene013129:intergenic | 35.0% | |
| CAAAGAACGAATATCTTCAG+TGG | - | 21144:6545-6564 | MS.gene013129:intergenic | 35.0% | |
| CCAAATCAAAAAACTCCTTG+AGG | - | 21144:7676-7695 | MS.gene013129:intergenic | 35.0% | |
| CTTCTGTTGTGGAATTTACT+TGG | + | 21144:7454-7473 | MS.gene013129:intron | 35.0% | |
| GGAATTTACTTGGCATCTAT+AGG | + | 21144:7464-7483 | MS.gene013129:intron | 35.0% | |
| GTGTTATCTTATCCCCTAAT+GGG | - | 21144:7397-7416 | MS.gene013129:intergenic | 35.0% | |
| TATAGCACACTATAGCATAG+CGG | + | 21144:7068-7087 | MS.gene013129:intron | 35.0% | |
| TGTGTTATCTTATCCCCTAA+TGG | - | 21144:7398-7417 | MS.gene013129:intergenic | 35.0% | |
| TTACTTGGCATCTATAGGAA+GGG | + | 21144:7469-7488 | MS.gene013129:intron | 35.0% | |
| TTATTCTTTGAATGCTGCGT+AGG | + | 21144:7517-7536 | MS.gene013129:intron | 35.0% | |
| TTTACTTGGCATCTATAGGA+AGG | + | 21144:7468-7487 | MS.gene013129:intron | 35.0% | |
| ! | CTGAAATTTTCACACCCATT+AGG | + | 21144:7380-7399 | MS.gene013129:intron | 35.0% |
| ! | GAAATTTTCACACCCATTAG+GGG | + | 21144:7382-7401 | MS.gene013129:intron | 35.0% |
| ! | GCAACTGCTATTTGACAAAA+CGG | - | 21144:6967-6986 | MS.gene013129:intergenic | 35.0% |
| ! | TTCTGCAGAATTTTATGGGA+AGG | + | 21144:7971-7990 | MS.gene013129:intron | 35.0% |
| !! | GAAGATAATTGAGTTGGACA+TGG | - | 21144:6262-6281 | MS.gene013129:intergenic | 35.0% |
| !! | TACTTGGGTTTGTTGTTGTT+CGG | - | 21144:6452-6471 | MS.gene013129:intergenic | 35.0% |
| !!! | CCTCAAGGAGTTTTTTGATT+TGG | + | 21144:7673-7692 | MS.gene013129:CDS | 35.0% |
| !!! | GAGTTTTTTGATTTGGGAAC+TGG | + | 21144:7680-7699 | MS.gene013129:CDS | 35.0% |
| AACATTCTGAGCAAGTAACC+TGG | - | 21144:6509-6528 | MS.gene013129:intergenic | 40.0% | |
| ACCGCAATTTCTTGGAGTTA+CGG | + | 21144:7905-7924 | MS.gene013129:intron | 40.0% | |
| AGTAAGGTCTAAAGACCTCA+AGG | + | 21144:7658-7677 | MS.gene013129:CDS | 40.0% | |
| AGTTGAACAAACCGCTTACT+AGG | - | 21144:8012-8031 | MS.gene013129:intergenic | 40.0% | |
| CGAGCTTACATACATACGAT+TGG | - | 21144:6804-6823 | MS.gene013129:intergenic | 40.0% | |
| CTTGTCAAAGTCGAAAGAGT+TGG | - | 21144:6308-6327 | MS.gene013129:intergenic | 40.0% | |
| GACACAAATCCATAACCAGA+TGG | - | 21144:7752-7771 | MS.gene013129:intergenic | 40.0% | |
| GGGTGTGAAAATTTCAGTGA+TGG | - | 21144:7377-7396 | MS.gene013129:intergenic | 40.0% | |
| GGTTTAGCGTTTGTGGAAAT+GGG | + | 21144:6742-6761 | MS.gene013129:CDS | 40.0% | |
| TACTTGCTCAGAATGTTCCA+TGG | + | 21144:6512-6531 | MS.gene013129:CDS | 40.0% | |
| TCCGTAACTCCAAGAAATTG+CGG | - | 21144:7909-7928 | MS.gene013129:intergenic | 40.0% | |
| TCTTTCATGAGAACCCTAGA+CGG | + | 21144:7726-7745 | MS.gene013129:CDS | 40.0% | |
| TGGAAAAGTCCTTGATGTTG+AGG | + | 21144:6576-6595 | MS.gene013129:CDS | 40.0% | |
| TGGGGTATGAGTATGAGTAA+TGG | - | 21144:6371-6390 | MS.gene013129:intergenic | 40.0% | |
| TGGTTGTGATAATAAGGGCT+GGG | - | 21144:6390-6409 | MS.gene013129:intergenic | 40.0% | |
| TTGGTTGTGATAATAAGGGC+TGG | - | 21144:6391-6410 | MS.gene013129:intergenic | 40.0% | |
| ! | ATTTTATGGGAAGGCCACTA+AGG | + | 21144:7980-7999 | MS.gene013129:CDS | 40.0% |
| ! | GGCCGTATTTTCTCCTTTTT+AGG | - | 21144:7581-7600 | MS.gene013129:intergenic | 40.0% |
| ! | TAGTAAGCGGTTTGTTCAAC+TGG | + | 21144:8011-8030 | MS.gene013129:CDS | 40.0% |
| ! | TTGTTGTTGTTCGGAAGTAG+AGG | - | 21144:6443-6462 | MS.gene013129:intergenic | 40.0% |
| ! | TTTTATGGGAAGGCCACTAA+GGG | + | 21144:7981-8000 | MS.gene013129:CDS | 40.0% |
| !! | TGGTAAAGTTGTTTCTGCAG+AGG | + | 21144:7700-7719 | MS.gene013129:CDS | 40.0% |
| AAACAGGGGTTTAGCGTTTG+TGG | + | 21144:6735-6754 | MS.gene013129:CDS | 45.0% | |
| AAATACGGCCATCAGTGGAA+CGG | + | 21144:7591-7610 | MS.gene013129:CDS | 45.0% | |
| AATGCTGCGTAGGAGTTTGA+CGG | + | 21144:7527-7546 | MS.gene013129:intron | 45.0% | |
| CCTGGTAGTAGAGAACTCTT+CGG | - | 21144:6491-6510 | MS.gene013129:intergenic | 45.0% | |
| GCGTCAAATAGCAGTCATAG+TGG | + | 21144:7042-7061 | MS.gene013129:intron | 45.0% | |
| GGGTTTAGCGTTTGTGGAAA+TGG | + | 21144:6741-6760 | MS.gene013129:CDS | 45.0% | |
| GGTTGTGATAATAAGGGCTG+GGG | - | 21144:6389-6408 | MS.gene013129:intergenic | 45.0% | |
| TCTTCAGTGGTACTTGACCA+TGG | - | 21144:6532-6551 | MS.gene013129:intergenic | 45.0% | |
| TCTTGCCGAGTTTGAAGGAA+AGG | + | 21144:7802-7821 | MS.gene013129:CDS | 45.0% | |
| TTGTTCCTCGGTGGTTACTT+GGG | - | 21144:6467-6486 | MS.gene013129:intergenic | 45.0% | |
| TTTGTTCCTCGGTGGTTACT+TGG | - | 21144:6468-6487 | MS.gene013129:intergenic | 45.0% | |
| ! | GAACTCTTCGGTTTGTTCCT+CGG | - | 21144:6479-6498 | MS.gene013129:intergenic | 45.0% |
| ! | TAAGCGGTTTGTTCAACTGG+CGG | + | 21144:8014-8033 | MS.gene013129:CDS | 45.0% |
| ! | TTCTGAGTTGAGCGTCAATG+AGG | + | 21144:8065-8084 | MS.gene013129:CDS | 45.0% |
| ACAAACCCAAGTAACCACCG+AGG | + | 21144:6459-6478 | MS.gene013129:CDS | 50.0% | |
| AGAGCTGCAGAAGCTTCTTC+AGG | - | 21144:6772-6791 | MS.gene013129:intergenic | 50.0% | |
| CATAACCAGATGGCCGTCTA+GGG | - | 21144:7742-7761 | MS.gene013129:intergenic | 50.0% | |
| CCGAAGAGTTCTCTACTACC+AGG | + | 21144:6488-6507 | MS.gene013129:CDS | 50.0% | |
| GAAGCTCTTGCCGAGTTTGA+AGG | + | 21144:7797-7816 | MS.gene013129:CDS | 50.0% | |
| GGAGAAAATACGGCCATCAG+TGG | + | 21144:7586-7605 | MS.gene013129:CDS | 50.0% | |
| TAAGGGTGGCACCTAGTAAG+CGG | + | 21144:7998-8017 | MS.gene013129:CDS | 50.0% | |
| ! | ATTGGCTTCCGTTCCACTGA+TGG | - | 21144:7602-7621 | MS.gene013129:intergenic | 50.0% |
| ! | TTACTAGGTGCCACCCTTAG+TGG | - | 21144:7997-8016 | MS.gene013129:intergenic | 50.0% |
| CCATAACCAGATGGCCGTCT+AGG | - | 21144:7743-7762 | MS.gene013129:intergenic | 55.0% | |
| CCTAGACGGCCATCTGGTTA+TGG | + | 21144:7740-7759 | MS.gene013129:CDS | 55.0% | |
| TATGGGAAGGCCACTAAGGG+TGG | + | 21144:7984-8003 | MS.gene013129:CDS | 55.0% | |
| ! | CTCTTCGGTTTGTTCCTCGG+TGG | - | 21144:6476-6495 | MS.gene013129:intergenic | 55.0% |
| GAGAACCCTAGACGGCCATC+TGG | + | 21144:7734-7753 | MS.gene013129:CDS | 60.0% | |
| ! | AACTGGCGGAGGAGAGTGCA+GGG | + | 21144:8028-8047 | MS.gene013129:CDS | 60.0% |
| ! | GCGGTTTGTTCAACTGGCGG+AGG | + | 21144:8017-8036 | MS.gene013129:CDS | 60.0% |
| ! | CAACTGGCGGAGGAGAGTGC+AGG | + | 21144:8027-8046 | MS.gene013129:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 21144 | gene | 6232 | 8110 | 6232 | ID=MS.gene013129 |
| 21144 | mRNA | 6232 | 8110 | 6232 | ID=MS.gene013129.t1;Parent=MS.gene013129 |
| 21144 | exon | 6232 | 6597 | 6232 | ID=MS.gene013129.t1.exon1;Parent=MS.gene013129.t1 |
| 21144 | CDS | 6232 | 6597 | 6232 | ID=cds.MS.gene013129.t1;Parent=MS.gene013129.t1 |
| 21144 | exon | 6712 | 6810 | 6712 | ID=MS.gene013129.t1.exon2;Parent=MS.gene013129.t1 |
| 21144 | CDS | 6712 | 6810 | 6712 | ID=cds.MS.gene013129.t1;Parent=MS.gene013129.t1 |
| 21144 | exon | 7539 | 7823 | 7539 | ID=MS.gene013129.t1.exon3;Parent=MS.gene013129.t1 |
| 21144 | CDS | 7539 | 7823 | 7539 | ID=cds.MS.gene013129.t1;Parent=MS.gene013129.t1 |
| 21144 | exon | 7979 | 8110 | 7979 | ID=MS.gene013129.t1.exon4;Parent=MS.gene013129.t1 |
| 21144 | CDS | 7979 | 8110 | 7979 | ID=cds.MS.gene013129.t1;Parent=MS.gene013129.t1 |
| Gene Sequence |
| Protein sequence |
