Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013165.t1 | XP_003602786.1 | 93.2 | 382 | 25 | 1 | 113 | 493 | 111 | 492 | 8.10E-100 | 374.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013165.t1 | Q7TNV0 | 34.8 | 112 | 68 | 3 | 130 | 241 | 84 | 190 | 2.1e-08 | 62.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013165.t1 | G7J3D6 | 93.2 | 382 | 25 | 1 | 113 | 493 | 111 | 492 | 5.9e-100 | 374.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene021158 | MS.gene013165 | PPI |
| MS.gene003999 | MS.gene013165 | PPI |
| MS.gene30557 | MS.gene013165 | PPI |
| MS.gene013165 | MS.gene41129 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013165.t1 | MTR_3g098990 | 95.960 | 495 | 15 | 4 | 1 | 493 | 1 | 492 | 0.0 | 921 |
| MS.gene013165.t1 | MTR_5g095720 | 40.984 | 427 | 209 | 12 | 93 | 493 | 444 | 853 | 2.32e-69 | 238 |
| MS.gene013165.t1 | MTR_3g058970 | 40.334 | 419 | 215 | 9 | 93 | 489 | 371 | 776 | 9.25e-67 | 229 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013165.t1 | AT3G48710 | 48.499 | 433 | 191 | 12 | 69 | 493 | 30 | 438 | 1.39e-109 | 333 |
| MS.gene013165.t1 | AT5G63550 | 48.792 | 414 | 172 | 10 | 94 | 493 | 94 | 481 | 1.20e-96 | 302 |
| MS.gene013165.t1 | AT5G63550 | 48.301 | 412 | 176 | 9 | 94 | 493 | 94 | 480 | 2.22e-95 | 299 |
| MS.gene013165.t1 | AT5G55660 | 52.632 | 171 | 73 | 4 | 93 | 261 | 323 | 487 | 7.43e-46 | 171 |
| MS.gene013165.t1 | AT4G26630 | 43.509 | 285 | 128 | 5 | 12 | 268 | 207 | 486 | 3.98e-42 | 160 |
| MS.gene013165.t1 | AT4G26630 | 43.509 | 285 | 128 | 5 | 12 | 268 | 207 | 486 | 3.98e-42 | 160 |
Find 94 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAAAGCTGTTGGAATTTC+TGG | 0.096765 | 3.3:-81418074 | MS.gene013165:CDS |
| TTCACACTACTCTTGTTTAT+TGG | 0.122133 | 3.3:+81418203 | None:intergenic |
| TTCTGGTTTGGGTTCATCTT+TGG | 0.192982 | 3.3:+81420248 | None:intergenic |
| TTCAACTTCTTCTTCTGGTT+TGG | 0.223760 | 3.3:+81420236 | None:intergenic |
| TTCAATTATCAGTCCTTTAC+TGG | 0.245498 | 3.3:+81419930 | None:intergenic |
| ATGTTGACAGGTAAACATTT+TGG | 0.262420 | 3.3:-81415707 | MS.gene013165:intron |
| TCAACTTCTTCTTCTGGTTT+GGG | 0.267047 | 3.3:+81420237 | None:intergenic |
| GAACCTTCACCTTCGAAGTT+TGG | 0.300483 | 3.3:-81419964 | MS.gene013165:CDS |
| GTTACTTCAACTTCTTCTTC+TGG | 0.304574 | 3.3:+81420231 | None:intergenic |
| ACCGTCTTCCTTTCCCTAGT+TGG | 0.341819 | 3.3:+81420000 | None:intergenic |
| AACTGCAAAGGCTGCGGTTA+AGG | 0.346132 | 3.3:-81416317 | MS.gene013165:CDS |
| GAAGTACTCTTGTGAGCTTT+TGG | 0.351465 | 3.3:+81416574 | None:intergenic |
| TTCATCATCGTCATCTTTCT+CGG | 0.352005 | 3.3:+81420146 | None:intergenic |
| CACTGCAACATCTTCATCTT+GGG | 0.358494 | 3.3:+81416651 | None:intergenic |
| GGAAGATGCTGGTGAGAAGA+AGG | 0.360035 | 3.3:-81420082 | MS.gene013165:CDS |
| TAAGGAAGTAGATTTCAATA+AGG | 0.361423 | 3.3:-81415925 | MS.gene013165:intron |
| TCTTCCCAAACAGTATACTA+TGG | 0.363218 | 3.3:+81418632 | None:intergenic |
| CCACTGCAACATCTTCATCT+TGG | 0.375147 | 3.3:+81416650 | None:intergenic |
| ATGCTCCATAGTATACTGTT+TGG | 0.382079 | 3.3:-81418637 | MS.gene013165:CDS |
| TTTGGTATCGTCTAGGGTTT+CGG | 0.386462 | 3.3:+81420293 | None:intergenic |
| CTATCACTCGTAGGAGTAAC+CGG | 0.404690 | 3.3:+81420024 | None:intergenic |
| AACAATCTAAAGAGGAATAT+AGG | 0.417865 | 3.3:-81418507 | MS.gene013165:CDS |
| TGCTCCATAGTATACTGTTT+GGG | 0.420968 | 3.3:-81418636 | MS.gene013165:CDS |
| CCCACACATAACCAGAAAAC+TGG | 0.422298 | 3.3:+81418484 | None:intergenic |
| ACCTTTGCAGGTGTTTCTCC+AGG | 0.429504 | 3.3:+81417630 | None:intergenic |
| CGGTTACTCCTACGAGTGAT+AGG | 0.435368 | 3.3:-81420023 | MS.gene013165:CDS |
| AAAGGAAAAGCAAGATACTA+AGG | 0.439714 | 3.3:-81416356 | MS.gene013165:CDS |
| AGCATATGCAGGTTGTCATC+AGG | 0.452386 | 3.3:+81418655 | None:intergenic |
| AGTTGTAGTTGAGATTCTTA+AGG | 0.454398 | 3.3:-81415943 | MS.gene013165:CDS |
| CAGCTCAAGGATATTCCTAA+TGG | 0.456524 | 3.3:-81419805 | MS.gene013165:intron |
| CTGCCTACTCGGCTCTACCT+TGG | 0.468843 | 3.3:+81415977 | None:intergenic |
| TAAAGGACTGATAATTGAAA+AGG | 0.476582 | 3.3:-81419926 | MS.gene013165:intron |
| GGAAGGTCTTCTTCCAGTAA+AGG | 0.477738 | 3.3:-81419943 | MS.gene013165:CDS |
| CTACGAGTGATAGGCCAACT+AGG | 0.481938 | 3.3:-81420014 | MS.gene013165:CDS |
| GATGTTGCAGTGGCAAATAA+TGG | 0.486223 | 3.3:-81416640 | MS.gene013165:CDS |
| AAAACAGAGAACAAGGGTAA+AGG | 0.493647 | 3.3:-81418285 | MS.gene013165:CDS |
| GGTTGCAGGTTGATCTGACT+TGG | 0.495113 | 3.3:+81416396 | None:intergenic |
| CTTCACCTTCGAAGTTTGGA+AGG | 0.500580 | 3.3:-81419960 | MS.gene013165:CDS |
| GCAACCTCTAGCAAATCTCC+TGG | 0.500613 | 3.3:-81417648 | MS.gene013165:CDS |
| GAAGATGCTGGTGAGAAGAA+GGG | 0.505112 | 3.3:-81420081 | MS.gene013165:CDS |
| CAAGGTAGAGCCGAGTAGGC+AGG | 0.505315 | 3.3:-81415976 | MS.gene013165:CDS |
| GGAACTGTCTGCAAAGCTGT+TGG | 0.508885 | 3.3:-81418083 | MS.gene013165:CDS |
| GCGTGCATGTCCTGCCTACT+CGG | 0.511396 | 3.3:+81415966 | None:intergenic |
| TGTGATATCCTCCGCCAACT+TGG | 0.519770 | 3.3:-81415803 | MS.gene013165:intron |
| AAAGATGACGATGATGAAGA+TGG | 0.520845 | 3.3:-81420141 | MS.gene013165:CDS |
| GATGAGGAGGAGGAAGATGC+TGG | 0.524251 | 3.3:-81420093 | MS.gene013165:CDS |
| GTCTAGGGTTTCGGTAGCCA+TGG | 0.528885 | 3.3:+81420302 | None:intergenic |
| CTTCCAAACTTCGAAGGTGA+AGG | 0.533904 | 3.3:+81419961 | None:intergenic |
| AAACAAGAGTAGTGTGAAGA+AGG | 0.535530 | 3.3:-81418198 | MS.gene013165:intron |
| AAGGCTGCGGTTAAGGATCA+AGG | 0.539742 | 3.3:-81416310 | MS.gene013165:intron |
| GTATACTATGGAGCATATGC+AGG | 0.541768 | 3.3:+81418644 | None:intergenic |
| GGTGGGTAAATCAGAGGGAG+AGG | 0.543397 | 3.3:-81416605 | MS.gene013165:CDS |
| TCATCCTCTTCAACATCAGA+AGG | 0.546993 | 3.3:+81416706 | None:intergenic |
| GCATAGAAAAGCAGAGGTGA+AGG | 0.548691 | 3.3:-81415672 | MS.gene013165:CDS |
| AAGCAAAACTGCAAAGGCTG+CGG | 0.555092 | 3.3:-81416323 | MS.gene013165:CDS |
| GGCTGCAAGCAAAACTGCAA+AGG | 0.556180 | 3.3:-81416329 | MS.gene013165:CDS |
| AGACCAAGGTAGAGCCGAGT+AGG | 0.561195 | 3.3:-81415980 | MS.gene013165:CDS |
| GTCAGGTTAACAATCTAAAG+AGG | 0.562124 | 3.3:-81418515 | MS.gene013165:intron |
| TCCTGGAGAAACACCTGCAA+AGG | 0.568341 | 3.3:-81417631 | MS.gene013165:intron |
| AGAGGTCTTCTTAACAGATG+TGG | 0.571409 | 3.3:+81416504 | None:intergenic |
| AGATCGTACCAAGTTGGCGG+AGG | 0.575455 | 3.3:+81415795 | None:intergenic |
| AATGGAAGTGATAACGAGGT+GGG | 0.578180 | 3.3:-81416622 | MS.gene013165:CDS |
| GTCGTCAGAGAAGAAGAGTC+CGG | 0.583062 | 3.3:-81420043 | MS.gene013165:CDS |
| AAAGCCTTCTGATGTTGAAG+AGG | 0.584119 | 3.3:-81416710 | MS.gene013165:CDS |
| TTGCATCAGAAAGTTCAGCT+TGG | 0.584847 | 3.3:+81416683 | None:intergenic |
| TACGAGTGATAGGCCAACTA+GGG | 0.587833 | 3.3:-81420013 | MS.gene013165:CDS |
| AAAGCAAGATACTAAGGGAA+AGG | 0.596671 | 3.3:-81416350 | MS.gene013165:CDS |
| AACGAGGTGGGTAAATCAGA+GGG | 0.602782 | 3.3:-81416610 | MS.gene013165:CDS |
| AAAAGATCGTACCAAGTTGG+CGG | 0.607538 | 3.3:+81415792 | None:intergenic |
| GCCAACTAGGGAAAGGAAGA+CGG | 0.609544 | 3.3:-81420001 | MS.gene013165:CDS |
| CTAGTTGGCCTATCACTCGT+AGG | 0.611965 | 3.3:+81420015 | None:intergenic |
| GGGACGTGGTACTCAGCTCA+AGG | 0.613257 | 3.3:-81419818 | MS.gene013165:CDS |
| GTGATAGGCCAACTAGGGAA+AGG | 0.614124 | 3.3:-81420008 | MS.gene013165:CDS |
| AAGGAAAAGCAAGATACTAA+GGG | 0.616103 | 3.3:-81416355 | MS.gene013165:CDS |
| TGATGCTGATGATGAGGAGG+AGG | 0.619807 | 3.3:-81420103 | MS.gene013165:CDS |
| GAACATCAGTAGTAGCATGT+GGG | 0.620057 | 3.3:+81418047 | None:intergenic |
| TTATGTGTGGGCTGAAAATG+AGG | 0.621414 | 3.3:-81418472 | MS.gene013165:intron |
| TTTAATGCATAGAAAAGCAG+AGG | 0.621749 | 3.3:-81415678 | MS.gene013165:CDS |
| GAAGACCTTCCAAACTTCGA+AGG | 0.621788 | 3.3:+81419955 | None:intergenic |
| AGAACATCAGTAGTAGCATG+TGG | 0.622938 | 3.3:+81418046 | None:intergenic |
| TTCTCCAGGAGATTTGCTAG+AGG | 0.624862 | 3.3:+81417644 | None:intergenic |
| AGAGAACAAGGGTAAAGGAG+AGG | 0.625869 | 3.3:-81418280 | MS.gene013165:CDS |
| TAATGGAAGTGATAACGAGG+TGG | 0.625907 | 3.3:-81416623 | MS.gene013165:CDS |
| TAACGAGGTGGGTAAATCAG+AGG | 0.626281 | 3.3:-81416611 | MS.gene013165:CDS |
| AACATCAGTAGTAGCATGTG+GGG | 0.636718 | 3.3:+81418048 | None:intergenic |
| TAAAAGTAGTAAGAAGACCA+AGG | 0.637365 | 3.3:-81415994 | MS.gene013165:CDS |
| CCAAGATGAAGATGTTGCAG+TGG | 0.642055 | 3.3:-81416650 | MS.gene013165:CDS |
| TGCTGATGCTGATGATGAGG+AGG | 0.650159 | 3.3:-81420106 | MS.gene013165:CDS |
| CGATGCTGATGCTGATGATG+AGG | 0.652325 | 3.3:-81420109 | MS.gene013165:CDS |
| AAGAGAAGCAGAATCCTGCT+CGG | 0.653130 | 3.3:+81416420 | None:intergenic |
| AACTAGGGAAAGGAAGACGG+TGG | 0.691004 | 3.3:-81419998 | MS.gene013165:CDS |
| ACTGTTTGGGAAGAAAACAA+AGG | 0.691158 | 3.3:-81418623 | MS.gene013165:intron |
| TGAAGTAACTGAACAAGACG+CGG | 0.710408 | 3.3:-81420217 | MS.gene013165:CDS |
| AAATAATGGAAGTGATAACG+AGG | 0.765529 | 3.3:-81416626 | MS.gene013165:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATTTATTTCATTTATTTAA+AGG | - | chr3.3:81417092-81417111 | MS.gene013165:intron | 10.0% |
| !!! | GTTTGTTATTTAATATAAAT+GGG | - | chr3.3:81417664-81417683 | MS.gene013165:CDS | 10.0% |
| !!! | TGTTTTTATTTTATTCATTT+TGG | - | chr3.3:81418063-81418082 | MS.gene013165:CDS | 10.0% |
| !!! | TTTTTTTCTCAATTTTTTAT+CGG | - | chr3.3:81416153-81416172 | MS.gene013165:intron | 10.0% |
| !! | GAGAAAACTTAATTAATATT+TGG | - | chr3.3:81418506-81418525 | MS.gene013165:CDS | 15.0% |
| !! | TTCAGAATAACAAAAAATTA+GGG | + | chr3.3:81419533-81419552 | None:intergenic | 15.0% |
| !!! | AATATCAATTTTAGAATACT+TGG | + | chr3.3:81417858-81417877 | None:intergenic | 15.0% |
| !!! | GGTTTGTTATTTAATATAAA+TGG | - | chr3.3:81417663-81417682 | MS.gene013165:CDS | 15.0% |
| !!! | GTTTTTGATTAATTTGATTT+TGG | - | chr3.3:81415816-81415835 | MS.gene013165:intron | 15.0% |
| !!! | TTTTTTGGTATTGATTTTTT+TGG | + | chr3.3:81419220-81419239 | None:intergenic | 15.0% |
| !! | AATGAAATAAATCTTTGCAA+AGG | + | chr3.3:81417085-81417104 | None:intergenic | 20.0% |
| !! | AATTAATAATATGTCTGATG+AGG | - | chr3.3:81420035-81420054 | MS.gene013165:CDS | 20.0% |
| !! | ACAATTAAAATCATACATAC+AGG | + | chr3.3:81416036-81416055 | None:intergenic | 20.0% |
| !! | ATGAAAATAAAATTTAGCTG+TGG | + | chr3.3:81420218-81420237 | None:intergenic | 20.0% |
| !! | GAAATGCAAAAAAAAGAAAA+AGG | + | chr3.3:81416014-81416033 | None:intergenic | 20.0% |
| !! | GTTCAGAATAACAAAAAATT+AGG | + | chr3.3:81419534-81419553 | None:intergenic | 20.0% |
| !! | TCAGAATAACAAAAAATTAG+GGG | + | chr3.3:81419532-81419551 | None:intergenic | 20.0% |
| !! | TGAAAATAAAATTTAGCTGT+GGG | + | chr3.3:81420217-81420236 | None:intergenic | 20.0% |
| !!! | AATAAAAAAGATGATTTGTC+TGG | + | chr3.3:81417810-81417829 | None:intergenic | 20.0% |
| !!! | AGACAAATCATCTTTTTTAT+TGG | - | chr3.3:81417809-81417828 | MS.gene013165:intron | 20.0% |
| !!! | ATAAATGGGTTAATATCATT+TGG | - | chr3.3:81417678-81417697 | MS.gene013165:intron | 20.0% |
| !!! | ATTTTTTTCTCTCTCAATTT+TGG | - | chr3.3:81415774-81415793 | MS.gene013165:intron | 20.0% |
| !!! | TATATCATTTTTGAATCCAA+AGG | - | chr3.3:81417503-81417522 | MS.gene013165:intron | 20.0% |
| !!! | TGATTTTGGTTATTTTTTCA+GGG | - | chr3.3:81415830-81415849 | MS.gene013165:intron | 20.0% |
| !!! | TTCTAACAAAACATGTTTTA+AGG | - | chr3.3:81417561-81417580 | MS.gene013165:intron | 20.0% |
| !!! | TTGATTTTGGTTATTTTTTC+AGG | - | chr3.3:81415829-81415848 | MS.gene013165:intron | 20.0% |
| !!! | TTTATTTTCCATTTTAGAAG+TGG | + | chr3.3:81417539-81417558 | None:intergenic | 20.0% |
| ! | AACAATCTAAAGAGGAATAT+AGG | - | chr3.3:81417161-81417180 | MS.gene013165:intron | 25.0% |
| ! | AACTAAAGGTTTAAAAACTG+TGG | + | chr3.3:81419480-81419499 | None:intergenic | 25.0% |
| ! | AACTATATTAGACAACACTA+AGG | + | chr3.3:81416946-81416965 | None:intergenic | 25.0% |
| ! | AAGATCATCAAACATAAAGA+GGG | + | chr3.3:81419401-81419420 | None:intergenic | 25.0% |
| ! | AATAAAAACAATACCTTTGC+AGG | + | chr3.3:81418053-81418072 | None:intergenic | 25.0% |
| ! | AATAGATATGAATCTTTGTG+AGG | - | chr3.3:81417258-81417277 | MS.gene013165:intron | 25.0% |
| ! | AATTATAAGTCACGCATATT+GGG | + | chr3.3:81416620-81416639 | None:intergenic | 25.0% |
| ! | AGAATAACAAAAAATTAGGG+GGG | + | chr3.3:81419530-81419549 | None:intergenic | 25.0% |
| ! | ATAGATATGAATCTTTGTGA+GGG | - | chr3.3:81417259-81417278 | MS.gene013165:intron | 25.0% |
| ! | ATCTACATCTTCACAATTAT+TGG | - | chr3.3:81417355-81417374 | MS.gene013165:intron | 25.0% |
| ! | ATTTATTCGCTAAAATGAAC+AGG | + | chr3.3:81418726-81418745 | None:intergenic | 25.0% |
| ! | CAGAATAACAAAAAATTAGG+GGG | + | chr3.3:81419531-81419550 | None:intergenic | 25.0% |
| ! | GAAGATATCTTCATACAAAT+TGG | + | chr3.3:81418633-81418652 | None:intergenic | 25.0% |
| ! | GAATATATGTGATGTATTTG+AGG | + | chr3.3:81418406-81418425 | None:intergenic | 25.0% |
| ! | GATTCTAATTAAAGTCAATC+AGG | + | chr3.3:81418704-81418723 | None:intergenic | 25.0% |
| ! | GCAAACAAAAATAAACATGT+GGG | + | chr3.3:81416781-81416800 | None:intergenic | 25.0% |
| ! | TAAAGGACTGATAATTGAAA+AGG | - | chr3.3:81415742-81415761 | MS.gene013165:intron | 25.0% |
| ! | TAAGGAAGTAGATTTCAATA+AGG | - | chr3.3:81419743-81419762 | MS.gene013165:intron | 25.0% |
| ! | TGATAAAATTTCTTCCTTCA+GGG | - | chr3.3:81419902-81419921 | MS.gene013165:intron | 25.0% |
| ! | TTCAAGATAGTTCCATAAAA+AGG | - | chr3.3:81418476-81418495 | MS.gene013165:CDS | 25.0% |
| ! | TTGAACATAATCACATATGT+TGG | + | chr3.3:81416125-81416144 | None:intergenic | 25.0% |
| ! | TTTATGGAACTATCTTGAAT+GGG | + | chr3.3:81418475-81418494 | None:intergenic | 25.0% |
| ! | TTTATTGCAAACTATTTCAG+TGG | - | chr3.3:81416967-81416986 | MS.gene013165:intron | 25.0% |
| ! | TTTCAATAACCAAAATGGTA+TGG | + | chr3.3:81416855-81416874 | None:intergenic | 25.0% |
| !! | AAAATTTTTAACCTGCAAAC+TGG | + | chr3.3:81419796-81419815 | None:intergenic | 25.0% |
| !! | AAGTAATTGGTTTCAACAAA+AGG | + | chr3.3:81416754-81416773 | None:intergenic | 25.0% |
| !! | CTTTTCTATGCATTAAATCA+AGG | + | chr3.3:81419987-81420006 | None:intergenic | 25.0% |
| !! | TATAGTTGATTGAAGTATCA+TGG | - | chr3.3:81416525-81416544 | MS.gene013165:CDS | 25.0% |
| !! | TTCTCATTGTTTCCTTTTTA+TGG | + | chr3.3:81418491-81418510 | None:intergenic | 25.0% |
| !! | TTTTATGGAACTATCTTGAA+TGG | + | chr3.3:81418476-81418495 | None:intergenic | 25.0% |
| !! | TTTTGCAATTAAATGTTGAC+AGG | - | chr3.3:81419949-81419968 | MS.gene013165:CDS | 25.0% |
| !!! | ACTGACTTTCATTAATCTTT+TGG | - | chr3.3:81416876-81416895 | MS.gene013165:intron | 25.0% |
| !!! | TAACAAAACATGTTTTAAGG+AGG | - | chr3.3:81417564-81417583 | MS.gene013165:intron | 25.0% |
| !!! | TATCATCCTTTTATTTCCTT+TGG | - | chr3.3:81418799-81418818 | MS.gene013165:intron | 25.0% |
| !!! | TCTAGAGTTTGACTTTTTTT+GGG | - | chr3.3:81418217-81418236 | MS.gene013165:CDS | 25.0% |
| !!! | TTCTAGAGTTTGACTTTTTT+TGG | - | chr3.3:81418216-81418235 | MS.gene013165:CDS | 25.0% |
| !!! | TTGCTTTTATGTTAACAGAA+AGG | - | chr3.3:81417978-81417997 | MS.gene013165:intron | 25.0% |
| AAAAAGCAAACTTCAGAATC+TGG | - | chr3.3:81418926-81418945 | MS.gene013165:intron | 30.0% | |
| AAAGGAAAAGCAAGATACTA+AGG | - | chr3.3:81419312-81419331 | MS.gene013165:intron | 30.0% | |
| AAGGAAAAGCAAGATACTAA+GGG | - | chr3.3:81419313-81419332 | MS.gene013165:intron | 30.0% | |
| AATCCTCCAAAGGAAATAAA+AGG | + | chr3.3:81418808-81418827 | None:intergenic | 30.0% | |
| ACAAAAGGTTGCTTATATGT+TGG | + | chr3.3:81416739-81416758 | None:intergenic | 30.0% | |
| AGACTTCAATGCTTAATCTA+GGG | - | chr3.3:81419430-81419449 | MS.gene013165:intron | 30.0% | |
| AGTTGTAGTTGAGATTCTTA+AGG | - | chr3.3:81419725-81419744 | MS.gene013165:intron | 30.0% | |
| ATAAAATTTCTTCCTTCAGG+GGG | - | chr3.3:81419904-81419923 | MS.gene013165:intron | 30.0% | |
| ATGCGTGACTTATAATTCTA+GGG | - | chr3.3:81416623-81416642 | MS.gene013165:CDS | 30.0% | |
| CAAACACTAAAGATACCATT+CGG | - | chr3.3:81418380-81418399 | MS.gene013165:intron | 30.0% | |
| CAAGATACAAAAAACTGGAA+AGG | - | chr3.3:81419294-81419313 | MS.gene013165:intron | 30.0% | |
| CAAGATCATCAAACATAAAG+AGG | + | chr3.3:81419402-81419421 | None:intergenic | 30.0% | |
| CAGTGTTTCAATAACCAAAA+TGG | + | chr3.3:81416860-81416879 | None:intergenic | 30.0% | |
| CTGATAAAATTTCTTCCTTC+AGG | - | chr3.3:81419901-81419920 | MS.gene013165:intron | 30.0% | |
| GAAGATATCGTGTGAATTTA+GGG | - | chr3.3:81415930-81415949 | MS.gene013165:CDS | 30.0% | |
| GAAGATGTAGATTTAATTGC+AGG | + | chr3.3:81417347-81417366 | None:intergenic | 30.0% | |
| GAATAACAAAAAATTAGGGG+GGG | + | chr3.3:81419529-81419548 | None:intergenic | 30.0% | |
| GAATTATAAGTCACGCATAT+TGG | + | chr3.3:81416621-81416640 | None:intergenic | 30.0% | |
| GATAAAATTTCTTCCTTCAG+GGG | - | chr3.3:81419903-81419922 | MS.gene013165:intron | 30.0% | |
| GGCAAACAAAAATAAACATG+TGG | + | chr3.3:81416782-81416801 | None:intergenic | 30.0% | |
| GTTACTTGTAATATGCTGTT+TGG | - | chr3.3:81418550-81418569 | MS.gene013165:intron | 30.0% | |
| TAAAAGTAGTAAGAAGACCA+AGG | - | chr3.3:81419674-81419693 | MS.gene013165:intron | 30.0% | |
| TAAACAAGACTTCCAAATAC+TGG | + | chr3.3:81416464-81416483 | None:intergenic | 30.0% | |
| TACTTCCAAAAAATCTGTGA+AGG | - | chr3.3:81419111-81419130 | MS.gene013165:intron | 30.0% | |
| TAGACTTCAATGCTTAATCT+AGG | - | chr3.3:81419429-81419448 | MS.gene013165:intron | 30.0% | |
| TAGATATGAATCTTTGTGAG+GGG | - | chr3.3:81417260-81417279 | MS.gene013165:intron | 30.0% | |
| TATGCGTGACTTATAATTCT+AGG | - | chr3.3:81416622-81416641 | MS.gene013165:CDS | 30.0% | |
| TCATCAATCAGTTAAGACAA+AGG | + | chr3.3:81417779-81417798 | None:intergenic | 30.0% | |
| TGAAGATATCGTGTGAATTT+AGG | - | chr3.3:81415929-81415948 | MS.gene013165:CDS | 30.0% | |
| TGACAAGTATTATGCATGTA+CGG | + | chr3.3:81416803-81416822 | None:intergenic | 30.0% | |
| TGCAGAAAATAGAATCTTGT+GGG | - | chr3.3:81420187-81420206 | MS.gene013165:CDS | 30.0% | |
| TGCTCAAAAGTAACTATGTA+AGG | + | chr3.3:81415901-81415920 | None:intergenic | 30.0% | |
| TGTTATGTGTATGGTATTAG+TGG | - | chr3.3:81416901-81416920 | MS.gene013165:intron | 30.0% | |
| TTCAATTATCAGTCCTTTAC+TGG | + | chr3.3:81415741-81415760 | None:intergenic | 30.0% | |
| TTTAATGCATAGAAAAGCAG+AGG | - | chr3.3:81419990-81420009 | MS.gene013165:CDS | 30.0% | |
| ! | AAAGCTTTGGTAGGTATATT+TGG | - | chr3.3:81420264-81420283 | MS.gene013165:CDS | 30.0% |
| ! | AAATAATGGAAGTGATAACG+AGG | - | chr3.3:81419042-81419061 | MS.gene013165:intron | 30.0% |
| ! | ATGTTGACAGGTAAACATTT+TGG | - | chr3.3:81419961-81419980 | MS.gene013165:CDS | 30.0% |
| ! | CTGAAGGAAGAAATTTTATC+AGG | + | chr3.3:81419903-81419922 | None:intergenic | 30.0% |
| ! | CTTTTACCTTTACCTACAAT+TGG | + | chr3.3:81419660-81419679 | None:intergenic | 30.0% |
| ! | TAGAGCATCTATCATAGAAA+AGG | + | chr3.3:81420302-81420321 | None:intergenic | 30.0% |
| ! | TGATTTGGATAGTTGTATTG+TGG | - | chr3.3:81418302-81418321 | MS.gene013165:intron | 30.0% |
| ! | TTCAAGTACCACTTCTAAAA+TGG | - | chr3.3:81417528-81417547 | MS.gene013165:intron | 30.0% |
| ! | TTCACACTACTCTTGTTTAT+TGG | + | chr3.3:81417468-81417487 | None:intergenic | 30.0% |
| ! | TTTTGAATATGTCTTGATGC+AGG | - | chr3.3:81419834-81419853 | MS.gene013165:intron | 30.0% |
| !! | GACATCTGTCTTTTTCATTA+TGG | - | chr3.3:81416400-81416419 | MS.gene013165:CDS | 30.0% |
| !! | TTAAGCATTGAAGTCTATAG+AGG | + | chr3.3:81419426-81419445 | None:intergenic | 30.0% |
| !!! | CTTTCCAGTTTTTTGTATCT+TGG | + | chr3.3:81419296-81419315 | None:intergenic | 30.0% |
| !!! | TCTCTCAATTTTGGTTTTTG+AGG | - | chr3.3:81415783-81415802 | MS.gene013165:intron | 30.0% |
| AAAAAAGTCAATTACCGAGC+AGG | - | chr3.3:81419234-81419253 | MS.gene013165:intron | 35.0% | |
| AAAACAGAGAACAAGGGTAA+AGG | - | chr3.3:81417383-81417402 | MS.gene013165:intron | 35.0% | |
| AAACAAGAGTAGTGTGAAGA+AGG | - | chr3.3:81417470-81417489 | MS.gene013165:intron | 35.0% | |
| AAAGATGACGATGATGAAGA+TGG | - | chr3.3:81415527-81415546 | MS.gene013165:intron | 35.0% | |
| AAAGCAAGATACTAAGGGAA+AGG | - | chr3.3:81419318-81419337 | MS.gene013165:intron | 35.0% | |
| AAGTGGTACTTGAATTCCTT+TGG | + | chr3.3:81417522-81417541 | None:intergenic | 35.0% | |
| AATGTCAGAACCTGATTGAA+AGG | - | chr3.3:81418127-81418146 | MS.gene013165:intron | 35.0% | |
| ACAAATATGTGTCACCAGTA+TGG | + | chr3.3:81416088-81416107 | None:intergenic | 35.0% | |
| ACATCTTCACAATTATTGGC+AGG | - | chr3.3:81417359-81417378 | MS.gene013165:intron | 35.0% | |
| ACATGATGATCTGATCCTTA+TGG | - | chr3.3:81417311-81417330 | MS.gene013165:intron | 35.0% | |
| ACTGAATTGTCGTCAAATCT+AGG | + | chr3.3:81416342-81416361 | None:intergenic | 35.0% | |
| ACTGTTTGGGAAGAAAACAA+AGG | - | chr3.3:81417045-81417064 | MS.gene013165:intron | 35.0% | |
| AGGCAATTAGACATACCATT+AGG | + | chr3.3:81415881-81415900 | None:intergenic | 35.0% | |
| ATACTCACATGACCAGTATT+TGG | - | chr3.3:81416449-81416468 | MS.gene013165:CDS | 35.0% | |
| ATCACCATCACAACATTGAA+AGG | + | chr3.3:81418286-81418305 | None:intergenic | 35.0% | |
| ATGCTCCATAGTATACTGTT+TGG | - | chr3.3:81417031-81417050 | MS.gene013165:intron | 35.0% | |
| ATTGCAGCTGTTAAGAACAA+TGG | - | chr3.3:81416548-81416567 | MS.gene013165:CDS | 35.0% | |
| CAATAACCAAAATGGTATGG+CGG | + | chr3.3:81416852-81416871 | None:intergenic | 35.0% | |
| CTGAATTGTCGTCAAATCTA+GGG | + | chr3.3:81416341-81416360 | None:intergenic | 35.0% | |
| CTGCAGAAAATAGAATCTTG+TGG | - | chr3.3:81420186-81420205 | MS.gene013165:CDS | 35.0% | |
| GACTTCAATGCTTAATCTAG+GGG | - | chr3.3:81419431-81419450 | MS.gene013165:intron | 35.0% | |
| GCAACCAAGATACAAAAAAC+TGG | - | chr3.3:81419289-81419308 | MS.gene013165:intron | 35.0% | |
| GTCAGGTTAACAATCTAAAG+AGG | - | chr3.3:81417153-81417172 | MS.gene013165:intron | 35.0% | |
| GTCTATACAGGTTAAAGCTT+TGG | - | chr3.3:81420251-81420270 | MS.gene013165:CDS | 35.0% | |
| GTCTGTTTGTGTTTGTTCAT+TGG | - | chr3.3:81415962-81415981 | MS.gene013165:CDS | 35.0% | |
| GTTACTTCAACTTCTTCTTC+TGG | + | chr3.3:81415440-81415459 | None:intergenic | 35.0% | |
| TACATAACAATAGTGCACTG+CGG | + | chr3.3:81418101-81418120 | None:intergenic | 35.0% | |
| TCACTTATTTCACACACACT+AGG | + | chr3.3:81418854-81418873 | None:intergenic | 35.0% | |
| TCAGAAAGAACTAAGTAAGC+AGG | + | chr3.3:81419635-81419654 | None:intergenic | 35.0% | |
| TCATAACAGAAATCCTCCAA+AGG | + | chr3.3:81418818-81418837 | None:intergenic | 35.0% | |
| TCCAAAAAATCTGTGAAGGA+GGG | - | chr3.3:81419115-81419134 | MS.gene013165:intron | 35.0% | |
| TCTTCCCAAACAGTATACTA+TGG | + | chr3.3:81417039-81417058 | None:intergenic | 35.0% | |
| TCTTCTTGCTGAAAAAGAAC+AGG | - | chr3.3:81417642-81417661 | MS.gene013165:CDS | 35.0% | |
| TGCGTGACTTATAATTCTAG+GGG | - | chr3.3:81416624-81416643 | MS.gene013165:CDS | 35.0% | |
| TGCTCCATAGTATACTGTTT+GGG | - | chr3.3:81417032-81417051 | MS.gene013165:intron | 35.0% | |
| TGTATTGTGGATTTCTTACC+TGG | - | chr3.3:81418315-81418334 | MS.gene013165:intron | 35.0% | |
| TTACTCTTCATCTTCATCAC+TGG | + | chr3.3:81420145-81420164 | None:intergenic | 35.0% | |
| TTCACATGCATACATCTGTA+GGG | - | chr3.3:81416371-81416390 | MS.gene013165:CDS | 35.0% | |
| TTCATCATCGTCATCTTTCT+CGG | + | chr3.3:81415525-81415544 | None:intergenic | 35.0% | |
| TTCCAAAAAATCTGTGAAGG+AGG | - | chr3.3:81419114-81419133 | MS.gene013165:intron | 35.0% | |
| TTCTTTCTGATGCCAATTGT+AGG | - | chr3.3:81419645-81419664 | MS.gene013165:intron | 35.0% | |
| TTTCACATGCATACATCTGT+AGG | - | chr3.3:81416370-81416389 | MS.gene013165:CDS | 35.0% | |
| ! | ACATGTGGGCTATAAGTAAT+TGG | + | chr3.3:81416767-81416786 | None:intergenic | 35.0% |
| ! | ATACAGGTTAAAGCTTTGGT+AGG | - | chr3.3:81420255-81420274 | MS.gene013165:CDS | 35.0% |
| ! | GATTTCTTACCTGGTTTGTA+AGG | - | chr3.3:81418324-81418343 | MS.gene013165:intron | 35.0% |
| ! | TATCTAATTGACTCTACCTG+TGG | - | chr3.3:81416654-81416673 | MS.gene013165:CDS | 35.0% |
| ! | TCAATGTTGTGATGGTGATT+TGG | - | chr3.3:81418287-81418306 | MS.gene013165:CDS | 35.0% |
| ! | TTCAACTTCTTCTTCTGGTT+TGG | + | chr3.3:81415435-81415454 | None:intergenic | 35.0% |
| ! | TTTTATGACCATAAGTCCAC+AGG | + | chr3.3:81416673-81416692 | None:intergenic | 35.0% |
| ! | TTTTCCTATGTTACGAGCAT+AGG | - | chr3.3:81416493-81416512 | MS.gene013165:CDS | 35.0% |
| !! | CATCCTTTTATTTCCTTTGG+AGG | - | chr3.3:81418802-81418821 | MS.gene013165:intron | 35.0% |
| !! | TCAACTTCTTCTTCTGGTTT+GGG | + | chr3.3:81415434-81415453 | None:intergenic | 35.0% |
| !! | TTGGAAGTCTTGTTTACATC+TGG | - | chr3.3:81416468-81416487 | MS.gene013165:CDS | 35.0% |
| !! | TTTACAGAAAGTGTCATCCA+AGG | + | chr3.3:81418452-81418471 | None:intergenic | 35.0% |
| !!! | CTGAAGTTTGCTTTTTCTTC+TGG | + | chr3.3:81418922-81418941 | None:intergenic | 35.0% |
| !!! | GTTTTCGACTTGTTTTGGTT+TGG | + | chr3.3:81415396-81415415 | None:intergenic | 35.0% |
| !!! | GTTTTTTGTATCTTGGTTGC+AGG | + | chr3.3:81419289-81419308 | None:intergenic | 35.0% |
| !!! | TGCTCGGTAATTGACTTTTT+TGG | + | chr3.3:81419235-81419254 | None:intergenic | 35.0% |
| !!! | TGGAGTTTTTTCACTGCTTT+TGG | + | chr3.3:81419200-81419219 | None:intergenic | 35.0% |
| !!! | TTTTGGTTTGGTATCGTCTA+GGG | + | chr3.3:81415384-81415403 | None:intergenic | 35.0% |
| AAAGATGATGCGGGTAAAGA+TGG | - | chr3.3:81420114-81420133 | MS.gene013165:CDS | 40.0% | |
| AAAGCCTTCTGATGTTGAAG+AGG | - | chr3.3:81418958-81418977 | MS.gene013165:intron | 40.0% | |
| AACATCAGTAGTAGCATGTG+GGG | + | chr3.3:81417623-81417642 | None:intergenic | 40.0% | |
| AACCTGTATAGACAGCTAAC+AGG | + | chr3.3:81420244-81420263 | None:intergenic | 40.0% | |
| AGAACATCAGTAGTAGCATG+TGG | + | chr3.3:81417625-81417644 | None:intergenic | 40.0% | |
| AGAGGTCTTCTTAACAGATG+TGG | + | chr3.3:81419167-81419186 | None:intergenic | 40.0% | |
| ATGTCTGATGAGGAAGATGA+AGG | - | chr3.3:81420045-81420064 | MS.gene013165:CDS | 40.0% | |
| ATTGTGCTTGATCACGACTT+TGG | - | chr3.3:81418242-81418261 | MS.gene013165:CDS | 40.0% | |
| CAAGAAATTATTCCCCCTGA+AGG | + | chr3.3:81419919-81419938 | None:intergenic | 40.0% | |
| CACTGCAACATCTTCATCTT+GGG | + | chr3.3:81419020-81419039 | None:intergenic | 40.0% | |
| CAGCTCAAGGATATTCCTAA+TGG | - | chr3.3:81415863-81415882 | MS.gene013165:intron | 40.0% | |
| CAGTTCAGCATGACAACTAA+AGG | + | chr3.3:81419494-81419513 | None:intergenic | 40.0% | |
| CTGATGCCAATTGTAGGTAA+AGG | - | chr3.3:81419651-81419670 | MS.gene013165:intron | 40.0% | |
| GAACATCAGTAGTAGCATGT+GGG | + | chr3.3:81417624-81417643 | None:intergenic | 40.0% | |
| GACACCTTTCAATGTTGTGA+TGG | - | chr3.3:81418279-81418298 | MS.gene013165:CDS | 40.0% | |
| GATGTTGCAGTGGCAAATAA+TGG | - | chr3.3:81419028-81419047 | MS.gene013165:intron | 40.0% | |
| GCAATTCATTACCAGTTTGC+AGG | - | chr3.3:81419782-81419801 | MS.gene013165:intron | 40.0% | |
| GCAGGAAAAACAGAGAACAA+GGG | - | chr3.3:81417377-81417396 | MS.gene013165:intron | 40.0% | |
| GCAGGTTAATATCAGCCATA+AGG | + | chr3.3:81417329-81417348 | None:intergenic | 40.0% | |
| GCGTGACTTATAATTCTAGG+GGG | - | chr3.3:81416625-81416644 | MS.gene013165:CDS | 40.0% | |
| GGAAAAAGATCGTACCAAGT+TGG | + | chr3.3:81419882-81419901 | None:intergenic | 40.0% | |
| GTATACTATGGAGCATATGC+AGG | + | chr3.3:81417027-81417046 | None:intergenic | 40.0% | |
| TAAGAAGCTGCAGAAAGAAC+TGG | + | chr3.3:81418761-81418780 | None:intergenic | 40.0% | |
| TCATCCTCTTCAACATCAGA+AGG | + | chr3.3:81418965-81418984 | None:intergenic | 40.0% | |
| TGAAGTAACTGAACAAGACG+CGG | - | chr3.3:81415451-81415470 | MS.gene013165:intron | 40.0% | |
| TGCAAAGCTGTTGGAATTTC+TGG | - | chr3.3:81417594-81417613 | MS.gene013165:intron | 40.0% | |
| TTGACGTGTTTGTGTTGTGT+CGG | - | chr3.3:81416178-81416197 | MS.gene013165:intron | 40.0% | |
| TTGCATCAGAAAGTTCAGCT+TGG | + | chr3.3:81418988-81419007 | None:intergenic | 40.0% | |
| ! | AAAAGATCGTACCAAGTTGG+CGG | + | chr3.3:81419879-81419898 | None:intergenic | 40.0% |
| ! | AATGGAAGTGATAACGAGGT+GGG | - | chr3.3:81419046-81419065 | MS.gene013165:intron | 40.0% |
| ! | AGGAATATAGGCCAGTTTTC+TGG | - | chr3.3:81417173-81417192 | MS.gene013165:intron | 40.0% |
| ! | CTTTTGGCGTGTTATGTGTA+TGG | - | chr3.3:81416892-81416911 | MS.gene013165:intron | 40.0% |
| ! | GTACTTGTTACTCTACTGGT+TGG | - | chr3.3:81419453-81419472 | MS.gene013165:intron | 40.0% |
| ! | TAATGGAAGTGATAACGAGG+TGG | - | chr3.3:81419045-81419064 | MS.gene013165:intron | 40.0% |
| ! | TGTTGTGTCGGTGCTTTAAA+GGG | - | chr3.3:81416190-81416209 | MS.gene013165:intron | 40.0% |
| ! | TTACCTGGTTTGTAAGGTCA+AGG | - | chr3.3:81418330-81418349 | MS.gene013165:intron | 40.0% |
| ! | TTATGTGTGGGCTGAAAATG+AGG | - | chr3.3:81417196-81417215 | MS.gene013165:intron | 40.0% |
| ! | TTTGGTATCGTCTAGGGTTT+CGG | + | chr3.3:81415378-81415397 | None:intergenic | 40.0% |
| ! | TTTTGTCCGCCATACCATTT+TGG | - | chr3.3:81416843-81416862 | MS.gene013165:intron | 40.0% |
| !! | ACACCTTTGCTATTCCTGAA+TGG | - | chr3.3:81417128-81417147 | MS.gene013165:intron | 40.0% |
| !! | GAAGTACTCTTGTGAGCTTT+TGG | + | chr3.3:81419097-81419116 | None:intergenic | 40.0% |
| !! | GCTTCGTTTTCGACTTGTTT+TGG | + | chr3.3:81415401-81415420 | None:intergenic | 40.0% |
| !! | TCAGGAATAGCAAAGGTGTT+AGG | + | chr3.3:81417127-81417146 | None:intergenic | 40.0% |
| !! | TTCTGGTTTGGGTTCATCTT+TGG | + | chr3.3:81415423-81415442 | None:intergenic | 40.0% |
| !!! | ACCCTCCTTCACAGATTTTT+TGG | + | chr3.3:81419119-81419138 | None:intergenic | 40.0% |
| !!! | CCAGTTTTCTGGTTATGTGT+GGG | - | chr3.3:81417184-81417203 | MS.gene013165:intron | 40.0% |
| !!! | GTTTTGGTTTGGTATCGTCT+AGG | + | chr3.3:81415385-81415404 | None:intergenic | 40.0% |
| !!! | TGGTTATTTTTTCAGGGACG+TGG | - | chr3.3:81415836-81415855 | MS.gene013165:intron | 40.0% |
| AAATTAGGGGGGGAACAAAC+AGG | + | chr3.3:81419519-81419538 | None:intergenic | 45.0% | |
| AACGAGGTGGGTAAATCAGA+GGG | - | chr3.3:81419058-81419077 | MS.gene013165:intron | 45.0% | |
| AAGAGAAGCAGAATCCTGCT+CGG | + | chr3.3:81419251-81419270 | None:intergenic | 45.0% | |
| AAGTGTCATCCAAGGCAGAA+TGG | + | chr3.3:81418444-81418463 | None:intergenic | 45.0% | |
| AGAGAACAAGGGTAAAGGAG+AGG | - | chr3.3:81417388-81417407 | MS.gene013165:intron | 45.0% | |
| AGCATATGCAGGTTGTCATC+AGG | + | chr3.3:81417016-81417035 | None:intergenic | 45.0% | |
| CCAAGATGAAGATGTTGCAG+TGG | - | chr3.3:81419018-81419037 | MS.gene013165:intron | 45.0% | |
| CCACCATTCAGGAATAGCAA+AGG | + | chr3.3:81417134-81417153 | None:intergenic | 45.0% | |
| CCACTGCAACATCTTCATCT+TGG | + | chr3.3:81419021-81419040 | None:intergenic | 45.0% | |
| CCCACACATAACCAGAAAAC+TGG | + | chr3.3:81417187-81417206 | None:intergenic | 45.0% | |
| CTATCACTCGTAGGAGTAAC+CGG | + | chr3.3:81415647-81415666 | None:intergenic | 45.0% | |
| CTCCTGTTAGCTGTCTATAC+AGG | - | chr3.3:81420239-81420258 | MS.gene013165:CDS | 45.0% | |
| CTTCACCTTCGAAGTTTGGA+AGG | - | chr3.3:81415708-81415727 | MS.gene013165:intron | 45.0% | |
| CTTCCAAACTTCGAAGGTGA+AGG | + | chr3.3:81415710-81415729 | None:intergenic | 45.0% | |
| GAACCTTCACCTTCGAAGTT+TGG | - | chr3.3:81415704-81415723 | MS.gene013165:intron | 45.0% | |
| GAAGACCTTCCAAACTTCGA+AGG | + | chr3.3:81415716-81415735 | None:intergenic | 45.0% | |
| GAAGATGCTGGTGAGAAGAA+GGG | - | chr3.3:81415587-81415606 | MS.gene013165:intron | 45.0% | |
| GCATAGAAAAGCAGAGGTGA+AGG | - | chr3.3:81419996-81420015 | MS.gene013165:CDS | 45.0% | |
| GGAAGGTCTTCTTCCAGTAA+AGG | - | chr3.3:81415725-81415744 | MS.gene013165:intron | 45.0% | |
| GGCAGGAAAAACAGAGAACA+AGG | - | chr3.3:81417376-81417395 | MS.gene013165:intron | 45.0% | |
| TAACGAGGTGGGTAAATCAG+AGG | - | chr3.3:81419057-81419076 | MS.gene013165:intron | 45.0% | |
| TACGAGTGATAGGCCAACTA+GGG | - | chr3.3:81415655-81415674 | MS.gene013165:intron | 45.0% | |
| TCATCCAAGGCAGAATGGTT+GGG | + | chr3.3:81418439-81418458 | None:intergenic | 45.0% | |
| TGACCTTGACCTTACAAACC+AGG | + | chr3.3:81418336-81418355 | None:intergenic | 45.0% | |
| TGACTCTACCTGTGGACTTA+TGG | - | chr3.3:81416662-81416681 | MS.gene013165:CDS | 45.0% | |
| TGATGAGGAAGATGAAGGTG+AGG | - | chr3.3:81420050-81420069 | MS.gene013165:CDS | 45.0% | |
| TGTGCCTATGCTCGTAACAT+AGG | + | chr3.3:81416500-81416519 | None:intergenic | 45.0% | |
| TGTTAACCTGACCACCATTC+AGG | + | chr3.3:81417145-81417164 | None:intergenic | 45.0% | |
| ! | AAGCTGATAGTGATGGCGAT+GGG | - | chr3.3:81420076-81420095 | MS.gene013165:CDS | 45.0% |
| ! | GAGGAAGAAGCTGATAGTGA+TGG | - | chr3.3:81420069-81420088 | MS.gene013165:CDS | 45.0% |
| ! | GTGATGTATTTGAGGCCGAA+TGG | + | chr3.3:81418398-81418417 | None:intergenic | 45.0% |
| ! | GTGTTGTGTCGGTGCTTTAA+AGG | - | chr3.3:81416189-81416208 | MS.gene013165:intron | 45.0% |
| !! | AGGGGTACTTGTTACTCTAC+TGG | - | chr3.3:81419449-81419468 | MS.gene013165:intron | 45.0% |
| !! | CCTTTGCTATTCCTGAATGG+TGG | - | chr3.3:81417131-81417150 | MS.gene013165:intron | 45.0% |
| !! | TTCTCCAGGAGATTTGCTAG+AGG | + | chr3.3:81418027-81418046 | None:intergenic | 45.0% |
| !!! | GCCAGTTTTCTGGTTATGTG+TGG | - | chr3.3:81417183-81417202 | MS.gene013165:intron | 45.0% |
| !!! | ATATTTTTCTTTTTTATATA+TGG | - | chr3.3:81419587-81419606 | MS.gene013165:intron | 5.0% |
| AACTAGGGAAAGGAAGACGG+TGG | - | chr3.3:81415670-81415689 | MS.gene013165:CDS | 50.0% | |
| ACCGTCTTCCTTTCCCTAGT+TGG | + | chr3.3:81415671-81415690 | None:intergenic | 50.0% | |
| ACCTTTGCAGGTGTTTCTCC+AGG | + | chr3.3:81418041-81418060 | None:intergenic | 50.0% | |
| CCACGTGCAACCTTTCAATC+AGG | + | chr3.3:81418140-81418159 | None:intergenic | 50.0% | |
| CCTGATTGAAAGGTTGCACG+TGG | - | chr3.3:81418137-81418156 | MS.gene013165:intron | 50.0% | |
| CGATGCGGGTAAAGATGATG+CGG | - | chr3.3:81420104-81420123 | MS.gene013165:CDS | 50.0% | |
| CGGTTACTCCTACGAGTGAT+AGG | - | chr3.3:81415645-81415664 | MS.gene013165:intron | 50.0% | |
| CTACGAGTGATAGGCCAACT+AGG | - | chr3.3:81415654-81415673 | MS.gene013165:intron | 50.0% | |
| GATGCGGGTAAAGATGATGC+GGG | - | chr3.3:81420105-81420124 | MS.gene013165:CDS | 50.0% | |
| GCAACCTCTAGCAAATCTCC+TGG | - | chr3.3:81418020-81418039 | MS.gene013165:intron | 50.0% | |
| GCCAACTAGGGAAAGGAAGA+CGG | - | chr3.3:81415667-81415686 | MS.gene013165:CDS | 50.0% | |
| GCTATTCCTGAATGGTGGTC+AGG | - | chr3.3:81417136-81417155 | MS.gene013165:intron | 50.0% | |
| GGAACTGTCTGCAAAGCTGT+TGG | - | chr3.3:81417585-81417604 | MS.gene013165:intron | 50.0% | |
| GGAAGATGCTGGTGAGAAGA+AGG | - | chr3.3:81415586-81415605 | MS.gene013165:intron | 50.0% | |
| GGCTGCAAGCAAAACTGCAA+AGG | - | chr3.3:81419339-81419358 | MS.gene013165:intron | 50.0% | |
| GTCATCCAAGGCAGAATGGT+TGG | + | chr3.3:81418440-81418459 | None:intergenic | 50.0% | |
| GTCGTCAGAGAAGAAGAGTC+CGG | - | chr3.3:81415625-81415644 | MS.gene013165:intron | 50.0% | |
| GTGATAGGCCAACTAGGGAA+AGG | - | chr3.3:81415660-81415679 | MS.gene013165:CDS | 50.0% | |
| TACTCCCAACCATTCTGCCT+TGG | - | chr3.3:81418432-81418451 | MS.gene013165:intron | 50.0% | |
| TCCTGGAGAAACACCTGCAA+AGG | - | chr3.3:81418037-81418056 | MS.gene013165:CDS | 50.0% | |
| TGTCACCAGTATGGCGAGTT+CGG | + | chr3.3:81416079-81416098 | None:intergenic | 50.0% | |
| TGTGATATCCTCCGCCAACT+TGG | - | chr3.3:81419865-81419884 | MS.gene013165:intron | 50.0% | |
| ! | AGCTGATAGTGATGGCGATG+GGG | - | chr3.3:81420077-81420096 | MS.gene013165:CDS | 50.0% |
| ! | CGATGCTGATGCTGATGATG+AGG | - | chr3.3:81415559-81415578 | MS.gene013165:intron | 50.0% |
| ! | CTAGTTGGCCTATCACTCGT+AGG | + | chr3.3:81415656-81415675 | None:intergenic | 50.0% |
| ! | GAAGCTGATAGTGATGGCGA+TGG | - | chr3.3:81420075-81420094 | MS.gene013165:CDS | 50.0% |
| ! | GCTTTTGGCAGCTTTTGCAG+AGG | + | chr3.3:81419185-81419204 | None:intergenic | 50.0% |
| ! | TGATGCTGATGATGAGGAGG+AGG | - | chr3.3:81415565-81415584 | MS.gene013165:intron | 50.0% |
| ! | TGCTGATGCTGATGATGAGG+AGG | - | chr3.3:81415562-81415581 | MS.gene013165:intron | 50.0% |
| !! | AGTTCGGTGTGTGACACGTT+GGG | + | chr3.3:81416063-81416082 | None:intergenic | 50.0% |
| !! | GGTTGCAGGTTGATCTGACT+TGG | + | chr3.3:81419275-81419294 | None:intergenic | 50.0% |
| ACACACCGAACTCGCCATAC+TGG | - | chr3.3:81416071-81416090 | MS.gene013165:intron | 55.0% | |
| AGACCAAGGTAGAGCCGAGT+AGG | - | chr3.3:81419688-81419707 | MS.gene013165:intron | 55.0% | |
| GATGAGGAGGAGGAAGATGC+TGG | - | chr3.3:81415575-81415594 | MS.gene013165:intron | 55.0% | |
| GGTGGGTAAATCAGAGGGAG+AGG | - | chr3.3:81419063-81419082 | MS.gene013165:intron | 55.0% | |
| ! | AGATCGTACCAAGTTGGCGG+AGG | + | chr3.3:81419876-81419895 | None:intergenic | 55.0% |
| !! | GAGTTCGGTGTGTGACACGT+TGG | + | chr3.3:81416064-81416083 | None:intergenic | 55.0% |
| !! | GTTCGGTGTGTGACACGTTG+GGG | + | chr3.3:81416062-81416081 | None:intergenic | 55.0% |
| CAAGGTAGAGCCGAGTAGGC+AGG | - | chr3.3:81419692-81419711 | MS.gene013165:intron | 60.0% | |
| CTGCCTACTCGGCTCTACCT+TGG | + | chr3.3:81419694-81419713 | None:intergenic | 60.0% | |
| GCGTGCATGTCCTGCCTACT+CGG | + | chr3.3:81419705-81419724 | None:intergenic | 60.0% | |
| GGGACGTGGTACTCAGCTCA+AGG | - | chr3.3:81415850-81415869 | MS.gene013165:intron | 60.0% | |
| TGGCGATGGGGATGTCGATG+CGG | - | chr3.3:81420089-81420108 | MS.gene013165:CDS | 60.0% | |
| GGCGATGGGGATGTCGATGC+GGG | - | chr3.3:81420090-81420109 | MS.gene013165:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 81415368 | 81420322 | 81415368 | ID=MS.gene013165 |
| chr3.3 | mRNA | 81415368 | 81420322 | 81415368 | ID=MS.gene013165.t1;Parent=MS.gene013165 |
| chr3.3 | exon | 81419927 | 81420322 | 81419927 | ID=MS.gene013165.t1.exon1;Parent=MS.gene013165.t1 |
| chr3.3 | CDS | 81419927 | 81420322 | 81419927 | ID=cds.MS.gene013165.t1;Parent=MS.gene013165.t1 |
| chr3.3 | exon | 81419806 | 81419839 | 81419806 | ID=MS.gene013165.t1.exon2;Parent=MS.gene013165.t1 |
| chr3.3 | CDS | 81419806 | 81419839 | 81419806 | ID=cds.MS.gene013165.t1;Parent=MS.gene013165.t1 |
| chr3.3 | exon | 81418624 | 81418703 | 81418624 | ID=MS.gene013165.t1.exon3;Parent=MS.gene013165.t1 |
| chr3.3 | CDS | 81418624 | 81418703 | 81418624 | ID=cds.MS.gene013165.t1;Parent=MS.gene013165.t1 |
| chr3.3 | exon | 81418473 | 81418532 | 81418473 | ID=MS.gene013165.t1.exon4;Parent=MS.gene013165.t1 |
| chr3.3 | CDS | 81418473 | 81418532 | 81418473 | ID=cds.MS.gene013165.t1;Parent=MS.gene013165.t1 |
| chr3.3 | exon | 81418199 | 81418309 | 81418199 | ID=MS.gene013165.t1.exon5;Parent=MS.gene013165.t1 |
| chr3.3 | CDS | 81418199 | 81418309 | 81418199 | ID=cds.MS.gene013165.t1;Parent=MS.gene013165.t1 |
| chr3.3 | exon | 81418027 | 81418107 | 81418027 | ID=MS.gene013165.t1.exon6;Parent=MS.gene013165.t1 |
| chr3.3 | CDS | 81418027 | 81418107 | 81418027 | ID=cds.MS.gene013165.t1;Parent=MS.gene013165.t1 |
| chr3.3 | exon | 81417632 | 81417694 | 81417632 | ID=MS.gene013165.t1.exon7;Parent=MS.gene013165.t1 |
| chr3.3 | CDS | 81417632 | 81417694 | 81417632 | ID=cds.MS.gene013165.t1;Parent=MS.gene013165.t1 |
| chr3.3 | exon | 81416311 | 81416767 | 81416311 | ID=MS.gene013165.t1.exon8;Parent=MS.gene013165.t1 |
| chr3.3 | CDS | 81416311 | 81416767 | 81416311 | ID=cds.MS.gene013165.t1;Parent=MS.gene013165.t1 |
| chr3.3 | exon | 81415926 | 81416023 | 81415926 | ID=MS.gene013165.t1.exon9;Parent=MS.gene013165.t1 |
| chr3.3 | CDS | 81415926 | 81416023 | 81415926 | ID=cds.MS.gene013165.t1;Parent=MS.gene013165.t1 |
| chr3.3 | exon | 81415804 | 81415834 | 81415804 | ID=MS.gene013165.t1.exon10;Parent=MS.gene013165.t1 |
| chr3.3 | CDS | 81415804 | 81415834 | 81415804 | ID=cds.MS.gene013165.t1;Parent=MS.gene013165.t1 |
| chr3.3 | exon | 81415658 | 81415719 | 81415658 | ID=MS.gene013165.t1.exon11;Parent=MS.gene013165.t1 |
| chr3.3 | CDS | 81415658 | 81415719 | 81415658 | ID=cds.MS.gene013165.t1;Parent=MS.gene013165.t1 |
| chr3.3 | exon | 81415368 | 81415376 | 81415368 | ID=MS.gene013165.t1.exon12;Parent=MS.gene013165.t1 |
| chr3.3 | CDS | 81415368 | 81415376 | 81415368 | ID=cds.MS.gene013165.t1;Parent=MS.gene013165.t1 |
| Gene Sequence |
| Protein sequence |
