Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021158.t1 | XP_003606715.2 | 95.2 | 913 | 36 | 4 | 1 | 907 | 1 | 911 | 6.60E-273 | 950.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021158.t1 | Q52KI8 | 56.6 | 143 | 61 | 1 | 1 | 142 | 1 | 143 | 1.6e-38 | 162.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021158.t1 | G7JCF1 | 95.2 | 913 | 36 | 4 | 1 | 907 | 1 | 911 | 4.8e-273 | 950.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene021158 | MS.gene013165 | PPI |
| MS.gene021158 | MS.gene75866 | PPI |
| MS.gene069519 | MS.gene021158 | PPI |
| MS.gene009274 | MS.gene021158 | PPI |
| MS.gene021158 | MS.gene21685 | PPI |
| MS.gene021158 | MS.gene058768 | PPI |
| MS.gene021158 | MS.gene033864 | PPI |
| MS.gene21943 | MS.gene021158 | PPI |
| MS.gene021158 | MS.gene024706 | PPI |
| MS.gene021158 | MS.gene22282 | PPI |
| MS.gene021158 | MS.gene53233 | PPI |
| MS.gene021158 | MS.gene055513 | PPI |
| MS.gene021158 | MS.gene06238 | PPI |
| MS.gene41678 | MS.gene021158 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021158.t1 | MTR_4g064740 | 96.166 | 913 | 27 | 4 | 1 | 907 | 1 | 911 | 0.0 | 1704 |
| MS.gene021158.t1 | MTR_4g064740 | 94.633 | 913 | 27 | 4 | 1 | 907 | 1 | 897 | 0.0 | 1348 |
| MS.gene021158.t1 | MTR_4g064740 | 90.539 | 909 | 20 | 4 | 1 | 907 | 1 | 845 | 0.0 | 1249 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene021158.t1 | AT2G29210 | 58.893 | 253 | 94 | 3 | 1 | 252 | 1 | 244 | 3.49e-84 | 289 |
| MS.gene021158.t1 | AT2G29210 | 58.893 | 253 | 94 | 3 | 1 | 252 | 1 | 244 | 3.70e-84 | 289 |
Find 239 sgRNAs with CRISPR-Local
Find 421 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATGGTCTGTTGGCTTCTT+TGG | 0.135375 | 4.4:+41608714 | None:intergenic |
| TATGGTCTGTTGGCTTCTTT+GGG | 0.166124 | 4.4:+41608715 | None:intergenic |
| CTCATCCTCGTGATGAAATT+TGG | 0.210053 | 4.4:+41608423 | None:intergenic |
| GGATGTCATGGCTAGGTTTA+TGG | 0.238409 | 4.4:+41608697 | None:intergenic |
| ACTTTGAAGTCCAGGGATTC+AGG | 0.246504 | 4.4:-41611614 | MS.gene021158:CDS |
| ACTATCATACCTTCGCATTA+TGG | 0.249458 | 4.4:+41609750 | None:intergenic |
| GGGAAGAGAGACGGCGAAAA+AGG | 0.256769 | 4.4:-41607789 | MS.gene021158:CDS |
| AAGTCCTGTGCAGTCTTCTA+TGG | 0.258541 | 4.4:-41609548 | MS.gene021158:CDS |
| AGCTCAATCTCAAGCTTCTT+TGG | 0.264195 | 4.4:+41607652 | None:intergenic |
| TCTGCTCCTTCACTCGTCTC+TGG | 0.265737 | 4.4:+41608675 | None:intergenic |
| CATGCTCTTCTTTGCTTTGA+GGG | 0.276810 | 4.4:+41607609 | None:intergenic |
| TCATGAGAAGGAGACCTCTT+AGG | 0.281842 | 4.4:+41609646 | None:intergenic |
| GGAATTCGAAAATGATTTAC+TGG | 0.282450 | 4.4:+41610621 | None:intergenic |
| CAGCATAGATCACCTGTTTC+GGG | 0.285960 | 4.4:-41609694 | MS.gene021158:CDS |
| GAAATTCAAATACAAATTAC+TGG | 0.289351 | 4.4:-41612142 | MS.gene021158:CDS |
| TGGTGTTCCTCAGCAGTTCT+TGG | 0.291429 | 4.4:-41612044 | MS.gene021158:CDS |
| CAGAAGAAGCATATTATTCT+AGG | 0.297335 | 4.4:-41608656 | MS.gene021158:intron |
| GAACCTATTCGCTTACTAAC+TGG | 0.299039 | 4.4:+41608451 | None:intergenic |
| CTTGAGTGCCTTCTGATTTG+TGG | 0.303451 | 4.4:+41608052 | None:intergenic |
| AGATGACTAGCTGCCCTTTC+AGG | 0.304384 | 4.4:+41608394 | None:intergenic |
| ACAGAAGTTTGCACCGGAAT+TGG | 0.310132 | 4.4:-41613007 | MS.gene021158:CDS |
| CTATCATACCTTCGCATTAT+GGG | 0.312064 | 4.4:+41609751 | None:intergenic |
| TAACTTCATACATGGTCTTC+TGG | 0.314039 | 4.4:-41612544 | MS.gene021158:CDS |
| AAGACTGCACAGGACTTCTT+TGG | 0.314046 | 4.4:+41609554 | None:intergenic |
| AATACAAATTACTGGATTCA+TGG | 0.319893 | 4.4:-41612134 | MS.gene021158:CDS |
| AGGATAGGAGAAAGCATAAA+AGG | 0.322404 | 4.4:-41607942 | MS.gene021158:CDS |
| AGAGGCCAAGAGGAGGAAAA+AGG | 0.328053 | 4.4:-41607854 | MS.gene021158:CDS |
| TGAGATTGAGCTGCGTAATA+AGG | 0.334168 | 4.4:-41607641 | MS.gene021158:CDS |
| GGTGATCTGCGTCGTCGTAC+TGG | 0.335851 | 4.4:+41610042 | None:intergenic |
| GATCGGATTGGAGACTTATC+TGG | 0.337789 | 4.4:+41608953 | None:intergenic |
| AAGAAAGTGGCAAGCATAGA+AGG | 0.346706 | 4.4:-41607972 | MS.gene021158:CDS |
| TTTGGCAGTGATAAATCTTC+TGG | 0.349282 | 4.4:-41608228 | MS.gene021158:intron |
| GGACATGACAAAGGTGAATA+TGG | 0.355949 | 4.4:-41612634 | MS.gene021158:CDS |
| GCAGCATAGATCACCTGTTT+CGG | 0.356772 | 4.4:-41609695 | MS.gene021158:CDS |
| TCATGCTCTTCTTTGCTTTG+AGG | 0.359216 | 4.4:+41607608 | None:intergenic |
| TACTAGGAGATCTCTGTTGC+AGG | 0.361598 | 4.4:+41609851 | None:intergenic |
| AGAAAGGCCAGGATATAAAA+TGG | 0.364329 | 4.4:-41608330 | MS.gene021158:intron |
| GATTTACTGGTTGCCCTTGC+AGG | 0.368060 | 4.4:+41610634 | None:intergenic |
| ACAGGACTTCTTTGGAGTCT+TGG | 0.369222 | 4.4:+41609562 | None:intergenic |
| CAAACCAGATGCTCCAATTC+CGG | 0.371274 | 4.4:+41612994 | None:intergenic |
| TGCACCGGAATTGGAGCATC+TGG | 0.375069 | 4.4:-41612998 | MS.gene021158:intron |
| TGGCTAGGTTTATGGTCTGT+TGG | 0.380139 | 4.4:+41608705 | None:intergenic |
| ATCAACCCTCTAGTCCTTTG+CGG | 0.382879 | 4.4:-41609039 | MS.gene021158:CDS |
| GAAAAGTGACCGAGCTTCTT+GGG | 0.391597 | 4.4:-41612587 | MS.gene021158:CDS |
| AAGCTCTTTCATGAACTTAC+CGG | 0.392718 | 4.4:+41612102 | None:intergenic |
| GAGGGTGACCTTCGTCTAAT+AGG | 0.395608 | 4.4:+41609877 | None:intergenic |
| TAAGGAGAGTAAAGATATCA+TGG | 0.397290 | 4.4:-41611839 | MS.gene021158:CDS |
| GGTGATCTACGTCGTCGTAT+AGG | 0.402707 | 4.4:+41609931 | None:intergenic |
| CATGAGAAGGAGACCTCTTA+GGG | 0.404136 | 4.4:+41609647 | None:intergenic |
| GTGATCTGCGTCGTCGTACT+GGG | 0.406823 | 4.4:+41610043 | None:intergenic |
| ATGGAACGCCCTCGACCCTT+TGG | 0.410183 | 4.4:+41610351 | None:intergenic |
| AGAAAAGTGACCGAGCTTCT+TGG | 0.412238 | 4.4:-41612588 | MS.gene021158:CDS |
| GGTGATCTGCGTTGTCGTAC+TGG | 0.413128 | 4.4:+41610012 | None:intergenic |
| CTGCGTCTCCGTGCAGGATA+AGG | 0.413723 | 4.4:+41609991 | None:intergenic |
| CTGTATCCTTTCAGAAGAAA+TGG | 0.415338 | 4.4:+41610332 | None:intergenic |
| GAGGGCGATCTCCGTCTAAC+AGG | 0.415650 | 4.4:+41610123 | None:intergenic |
| AGATCTCTGTTGCAGGGGTG+AGG | 0.421202 | 4.4:+41609858 | None:intergenic |
| GGAAGAGAGGCTGAAGAAAC+TGG | 0.422262 | 4.4:-41611818 | MS.gene021158:intron |
| CTGCTCCTTCACTCGTCTCT+GGG | 0.422657 | 4.4:+41608676 | None:intergenic |
| GGGACTCAAGCTTCCTTCAA+TGG | 0.423755 | 4.4:+41608737 | None:intergenic |
| GACCTCCGTCCACGGCTTAG+TGG | 0.424037 | 4.4:+41609793 | None:intergenic |
| GGATTCAGGGCACTACATTC+AGG | 0.425295 | 4.4:-41611600 | MS.gene021158:CDS |
| GGTGTTCTGCGTCTTTGAAC+AGG | 0.425400 | 4.4:+41610150 | None:intergenic |
| CGAATTCCCGAAGTTATTCA+AGG | 0.427764 | 4.4:-41610606 | MS.gene021158:intron |
| GAAGGCACTCAAGATTTAGT+TGG | 0.429516 | 4.4:-41608042 | MS.gene021158:CDS |
| GTGGTGCTGATCACTACTTT+TGG | 0.430067 | 4.4:+41608071 | None:intergenic |
| GTAAGTTCATGAAAGAGCTT+TGG | 0.430325 | 4.4:-41612099 | MS.gene021158:CDS |
| AGAGAGAAATTGACCATTGA+AGG | 0.434146 | 4.4:-41608750 | MS.gene021158:CDS |
| GGTGACCTGCGCCGCATACT+AGG | 0.436692 | 4.4:+41609835 | None:intergenic |
| GGTGTTCTGCGTCGACGAAA+TGG | 0.439002 | 4.4:+41610177 | None:intergenic |
| CAGATCCAACTTTGAAGTCC+AGG | 0.450428 | 4.4:-41611622 | MS.gene021158:CDS |
| TTCTCTCTTGTTTGCCTCAG+AGG | 0.451538 | 4.4:+41608765 | None:intergenic |
| TCTCTCTTGTTTGCCTCAGA+GGG | 0.451933 | 4.4:+41608766 | None:intergenic |
| CTAGAGGGTTGATAAACTTC+CGG | 0.454350 | 4.4:+41609049 | None:intergenic |
| TCAAGCTTCTTTGGATCGTA+TGG | 0.456459 | 4.4:+41607661 | None:intergenic |
| CTTTGAAGTCCAGGGATTCA+GGG | 0.458452 | 4.4:-41611613 | MS.gene021158:CDS |
| GGTGATCTGCGTCGTCGTAC+TGG | 0.460733 | 4.4:+41610072 | None:intergenic |
| CTGCAAGTGCCTCCCCTAAG+AGG | 0.462910 | 4.4:-41609660 | MS.gene021158:CDS |
| AATGTAGTGCCCTGAATCCC+TGG | 0.465080 | 4.4:+41611604 | None:intergenic |
| GGCAAGGGAGGCGAGTCTCC+TGG | 0.466974 | 4.4:-41608207 | MS.gene021158:CDS |
| GAATCCCTGGACTTCAAAGT+TGG | 0.474942 | 4.4:+41611617 | None:intergenic |
| AGCGGACCTTGAATAACTTC+GGG | 0.477075 | 4.4:+41610600 | None:intergenic |
| ATAGGAGGCCATCTTATTCA+AGG | 0.477162 | 4.4:-41610251 | MS.gene021158:CDS |
| TAATGATGCAGAAAGTGAAC+GGG | 0.480070 | 4.4:-41612168 | MS.gene021158:intron |
| GATCTTCTCCTTGAATAAGA+TGG | 0.481430 | 4.4:+41610243 | None:intergenic |
| GATTCTGTTTCTGAAGAAAG+TGG | 0.489143 | 4.4:-41607985 | MS.gene021158:CDS |
| ATATGGACGTAATGAGGCCT+TGG | 0.489542 | 4.4:-41612617 | MS.gene021158:CDS |
| CTCCTATGAGGAGATCTTTG+TGG | 0.490568 | 4.4:+41610267 | None:intergenic |
| AAGCGGACCTTGAATAACTT+CGG | 0.491825 | 4.4:+41610599 | None:intergenic |
| GGTGATCTTCGTCGTCGCAC+TGG | 0.494165 | 4.4:+41610099 | None:intergenic |
| GGCGTTCCATTTCTTCTGAA+AGG | 0.495811 | 4.4:-41610338 | MS.gene021158:CDS |
| TTGCTTGTGGTGATATTGAT+CGG | 0.498595 | 4.4:+41608936 | None:intergenic |
| AACCTATTCGCTTACTAACT+GGG | 0.499232 | 4.4:+41608452 | None:intergenic |
| GGAGGAGAAGCATCGAAAGC+GGG | 0.501336 | 4.4:-41607809 | MS.gene021158:CDS |
| GGAGATCTGCGTCTCCGTGC+AGG | 0.505031 | 4.4:+41609985 | None:intergenic |
| GGTCTCCTTCTCATGATGAA+TGG | 0.507530 | 4.4:-41609639 | MS.gene021158:CDS |
| CACTCGTCTCTGGGATGTCA+TGG | 0.508313 | 4.4:+41608685 | None:intergenic |
| TGAAAGGGCAGCTAGTCATC+TGG | 0.509913 | 4.4:-41608392 | MS.gene021158:CDS |
| CTTCGTCGTCGCACTGGAGA+GGG | 0.511910 | 4.4:+41610105 | None:intergenic |
| GGTATTCGACGCATCGGTGA+AGG | 0.512792 | 4.4:+41609814 | None:intergenic |
| CTGCGTCTTCGCACAGGAGA+GGG | 0.514178 | 4.4:+41609964 | None:intergenic |
| TCATCGTCTGAAATATAGCC+TGG | 0.514329 | 4.4:+41607727 | None:intergenic |
| GGTGAAGTTCTCCTTCTGAC+TGG | 0.515094 | 4.4:+41609583 | None:intergenic |
| GTGTTATGGTGGTACCGATA+AGG | 0.515482 | 4.4:+41610735 | None:intergenic |
| CTGCGTCGTCGTACTGGGGA+AGG | 0.515506 | 4.4:+41610048 | None:intergenic |
| AGATCCAACTTTGAAGTCCA+GGG | 0.516379 | 4.4:-41611621 | MS.gene021158:CDS |
| GAATAAGATGGCCTCCTATG+AGG | 0.522443 | 4.4:+41610255 | None:intergenic |
| CTTTGTGGTGAACGTCTTCG+AGG | 0.524203 | 4.4:+41610282 | None:intergenic |
| TCTCGCCGTCACAACATGTC+AGG | 0.524525 | 4.4:-41613412 | None:intergenic |
| GATCTATGCTGCAAAGGAGA+TGG | 0.525694 | 4.4:+41609706 | None:intergenic |
| ATGGTGTTAGAGCAAGGAAC+AGG | 0.526411 | 4.4:-41611556 | MS.gene021158:intron |
| TGCCTCAGAGGGATTTCATG+TGG | 0.527285 | 4.4:+41608777 | None:intergenic |
| AATAATGAAAGGAATAAGAA+AGG | 0.530279 | 4.4:-41608346 | MS.gene021158:CDS |
| TGGTCTGTTGGCTTCTTTGG+GGG | 0.531174 | 4.4:+41608717 | None:intergenic |
| AATTCAGAGGAAGAAAGATA+AGG | 0.532772 | 4.4:-41611857 | MS.gene021158:CDS |
| ATGGTTCTTCACCATCACTT+TGG | 0.533818 | 4.4:+41607680 | None:intergenic |
| TATCATACCTTCGCATTATG+GGG | 0.534876 | 4.4:+41609752 | None:intergenic |
| GAAGAAGAAGCTGCGAAAGG+AGG | 0.535503 | 4.4:-41607827 | MS.gene021158:CDS |
| GATCTCTGTTGCAGGGGTGA+GGG | 0.537291 | 4.4:+41609859 | None:intergenic |
| CACCACAAAGATCTCCTCAT+AGG | 0.537344 | 4.4:-41610269 | MS.gene021158:CDS |
| TGCAGATCTCCAAAGGGTCG+AGG | 0.538902 | 4.4:-41610360 | MS.gene021158:intron |
| GTCTTCAAACCCAAGAAGCT+CGG | 0.539593 | 4.4:+41612578 | None:intergenic |
| TGTGGTGATATTGATCGGAT+TGG | 0.543477 | 4.4:+41608941 | None:intergenic |
| GATCTCCTAGTATGCGGCGC+AGG | 0.544212 | 4.4:-41609840 | MS.gene021158:CDS |
| TCCCCAGTTAGTAAGCGAAT+AGG | 0.546444 | 4.4:-41608454 | MS.gene021158:CDS |
| TTGACAGAGGCTCACCTGCA+AGG | 0.546463 | 4.4:-41610648 | MS.gene021158:intron |
| TTGAAAACTGCAGGTGAATG+TGG | 0.546556 | 4.4:+41610762 | None:intergenic |
| ACTGGTGACTTCTGTTGACC+AGG | 0.547027 | 4.4:+41608189 | None:intergenic |
| TGACAGAGGCTCACCTGCAA+GGG | 0.547216 | 4.4:-41610647 | MS.gene021158:intron |
| CTGCGTCTTTGAACAGGAGA+GGG | 0.548291 | 4.4:+41610156 | None:intergenic |
| TAAGGTGAATTGAAAACTGC+AGG | 0.548365 | 4.4:+41610753 | None:intergenic |
| AGTCCTGTGCAGTCTTCTAT+GGG | 0.549704 | 4.4:-41609547 | MS.gene021158:CDS |
| ATCGAAAGCGGGAAGAGAGA+CGG | 0.550323 | 4.4:-41607798 | MS.gene021158:CDS |
| ATGGTCTGTTGGCTTCTTTG+GGG | 0.552334 | 4.4:+41608716 | None:intergenic |
| GTTCTCCTTCTGACTGGAGA+TGG | 0.552568 | 4.4:+41609589 | None:intergenic |
| GGTGATCTGCGTCTTCGCAC+AGG | 0.555011 | 4.4:+41609958 | None:intergenic |
| AGTCTTCTATGGGAAGAGTC+AGG | 0.555275 | 4.4:-41609537 | MS.gene021158:intron |
| ATAGAAGGGATGGAAAGGAT+AGG | 0.555910 | 4.4:-41607957 | MS.gene021158:CDS |
| CTGCGTCGTCGTACTGGAGA+GGG | 0.556617 | 4.4:+41610078 | None:intergenic |
| CTGAAAATGAAGAGTAAACC+AGG | 0.557310 | 4.4:-41607745 | MS.gene021158:CDS |
| CAGTGATAAATCTTCTGGCA+AGG | 0.559732 | 4.4:-41608223 | MS.gene021158:CDS |
| GGTGATCTACGTCGGTGCAT+TGG | 0.560342 | 4.4:+41609904 | None:intergenic |
| ATAGTAGAACTCCACGGCGC+AGG | 0.561138 | 4.4:-41609732 | MS.gene021158:CDS |
| CTGCGTTGTCGTACTGGAGA+AGG | 0.562594 | 4.4:+41610018 | None:intergenic |
| CTACGTCGGTGCATTGGAGA+AGG | 0.562699 | 4.4:+41609910 | None:intergenic |
| GAATGCATTCCACGTCGGAT+AGG | 0.562702 | 4.4:+41610201 | None:intergenic |
| GAGTATATGCAGATCTCCAA+AGG | 0.566273 | 4.4:-41610367 | MS.gene021158:intron |
| AGGAGGAGAAGCATCGAAAG+CGG | 0.568565 | 4.4:-41607810 | MS.gene021158:CDS |
| ACTAGGAGATCTCTGTTGCA+GGG | 0.573359 | 4.4:+41609852 | None:intergenic |
| AGGTGAATATGGACGTAATG+AGG | 0.574170 | 4.4:-41612623 | MS.gene021158:CDS |
| GTAATGATGCAGAAAGTGAA+CGG | 0.574593 | 4.4:-41612169 | MS.gene021158:intron |
| TGAAAGGAATAAGAAAGGCC+AGG | 0.574897 | 4.4:-41608341 | MS.gene021158:CDS |
| CGTCGTCGTACTGGGGAAGG+TGG | 0.575213 | 4.4:+41610051 | None:intergenic |
| CTGGTCTTACTTCTTGCTTG+TGG | 0.575834 | 4.4:+41608923 | None:intergenic |
| CGATGAGGAAGCTGAACGAA+GGG | 0.577929 | 4.4:-41607710 | MS.gene021158:CDS |
| AGGATGGAAAACAAACTGAC+AGG | 0.578708 | 4.4:-41611580 | MS.gene021158:CDS |
| GTGCTTATTAACTTCATACA+TGG | 0.580754 | 4.4:-41612552 | MS.gene021158:CDS |
| GACCTTCGTCTAATAGGTGA+TGG | 0.581463 | 4.4:+41609883 | None:intergenic |
| AGTGGCAAGCATAGAAGGGA+TGG | 0.582926 | 4.4:-41607967 | MS.gene021158:CDS |
| TGGATTAGGCTGAAAGCGAT+AGG | 0.583442 | 4.4:-41611891 | MS.gene021158:intron |
| TCTTCGTCGTCGCACTGGAG+AGG | 0.583498 | 4.4:+41610104 | None:intergenic |
| ATGATTCTGAGTTAGAAGAC+AGG | 0.586623 | 4.4:-41607879 | MS.gene021158:CDS |
| GTAAAGATATCATGGAAGAG+AGG | 0.588000 | 4.4:-41611831 | MS.gene021158:CDS |
| ACAGAAGTCACCAGTGAACA+AGG | 0.589806 | 4.4:-41608181 | MS.gene021158:CDS |
| ACATGGTCTTCTGGAAGCGA+AGG | 0.592482 | 4.4:-41612535 | MS.gene021158:intron |
| AGCATTATGATAATAATGAA+AGG | 0.592936 | 4.4:-41608357 | MS.gene021158:CDS |
| GGAGATGGAGATACACGTGC+AGG | 0.593789 | 4.4:+41609604 | None:intergenic |
| CTACGTCGTCGTATAGGAGA+AGG | 0.596511 | 4.4:+41609937 | None:intergenic |
| GTCTCTGGGATGTCATGGCT+AGG | 0.596624 | 4.4:+41608690 | None:intergenic |
| GACATCCCAGAGACGAGTGA+AGG | 0.597887 | 4.4:-41608681 | MS.gene021158:CDS |
| GCAGATCTCCAAAGGGTCGA+GGG | 0.599101 | 4.4:-41610359 | MS.gene021158:intron |
| CACAAAGATCTCCTCATAGG+AGG | 0.599164 | 4.4:-41610266 | MS.gene021158:CDS |
| TCTGCGTCTTTGAACAGGAG+AGG | 0.599370 | 4.4:+41610155 | None:intergenic |
| TGAGTTAGAAGACAGGAAAG+AGG | 0.599489 | 4.4:-41607872 | MS.gene021158:CDS |
| TACAGACCGCAAAGGACTAG+AGG | 0.599929 | 4.4:+41609033 | None:intergenic |
| AGTGATAAATCTTCTGGCAA+GGG | 0.600108 | 4.4:-41608222 | MS.gene021158:CDS |
| GAGGAAGCTGAACGAAGGGA+TGG | 0.600904 | 4.4:-41607706 | MS.gene021158:CDS |
| GAACACCCTCTCCTGTTAGA+CGG | 0.602336 | 4.4:-41610134 | MS.gene021158:CDS |
| TAAGTCACAGAAGTTTGCAC+CGG | 0.605355 | 4.4:-41613013 | MS.gene021158:CDS |
| GAGAGCTTGACCTCCGTCCA+CGG | 0.605834 | 4.4:+41609785 | None:intergenic |
| GGAGAAGAAGAAGCTGCGAA+AGG | 0.606850 | 4.4:-41607830 | MS.gene021158:CDS |
| CAAGCATAGAAGGGATGGAA+AGG | 0.610084 | 4.4:-41607962 | MS.gene021158:CDS |
| ACAGGTGATCTATGCTGCAA+AGG | 0.611103 | 4.4:+41609700 | None:intergenic |
| CTAGGAGATCTCTGTTGCAG+GGG | 0.611845 | 4.4:+41609853 | None:intergenic |
| ACGATGAGGAAGCTGAACGA+AGG | 0.612999 | 4.4:-41607711 | MS.gene021158:CDS |
| ATCTGCCAAATTTCATCACG+AGG | 0.613155 | 4.4:-41608428 | MS.gene021158:CDS |
| GAACTCCATTCATCATGAGA+AGG | 0.615832 | 4.4:+41609634 | None:intergenic |
| AGTATATGCAGATCTCCAAA+GGG | 0.617919 | 4.4:-41610366 | MS.gene021158:intron |
| ATCATACCTTCGCATTATGG+GGG | 0.620361 | 4.4:+41609753 | None:intergenic |
| TATCTCCATCTCCAGTCAGA+AGG | 0.621299 | 4.4:-41609594 | MS.gene021158:CDS |
| GATAAATCTTCTGGCAAGGG+AGG | 0.621601 | 4.4:-41608219 | MS.gene021158:CDS |
| GGATAACAAGTGAAATTCAG+AGG | 0.624286 | 4.4:-41611870 | MS.gene021158:CDS |
| CGATCTCCGTCTAACAGGAG+AGG | 0.624447 | 4.4:+41610128 | None:intergenic |
| GGAAAACAAACTGACAGGAA+TGG | 0.624597 | 4.4:-41611575 | MS.gene021158:CDS |
| TCTGCGTCGTCGTACTGGAG+AGG | 0.626382 | 4.4:+41610077 | None:intergenic |
| TCAGGGCACTACATTCAGGA+TGG | 0.627377 | 4.4:-41611596 | MS.gene021158:CDS |
| AGGGATGGTCACCAAAGTGA+TGG | 0.628743 | 4.4:-41607691 | MS.gene021158:CDS |
| TTAGCATCCAAGAACTGCTG+AGG | 0.629191 | 4.4:+41612037 | None:intergenic |
| GGACGGAGGATTAGATGCGA+AGG | 0.629390 | 4.4:-41611660 | MS.gene021158:CDS |
| AGAAAGTGGCAAGCATAGAA+GGG | 0.631893 | 4.4:-41607971 | MS.gene021158:CDS |
| GAACTGCTGAGGAACACCAC+TGG | 0.634456 | 4.4:+41612048 | None:intergenic |
| ACAGGAATGGTGTTAGAGCA+AGG | 0.635476 | 4.4:-41611562 | MS.gene021158:CDS |
| CGCCGTCACAACATGTCAGG+CGG | 0.637769 | 4.4:-41613409 | None:intergenic |
| ACAGGAAAGAGGCCAAGAGG+AGG | 0.638857 | 4.4:-41607861 | MS.gene021158:CDS |
| AAGACAGGAAAGAGGCCAAG+AGG | 0.640404 | 4.4:-41607864 | MS.gene021158:CDS |
| GATCAGCACCACAAATCAGA+AGG | 0.640722 | 4.4:-41608060 | MS.gene021158:CDS |
| GATCTCCGTCTAACAGGAGA+GGG | 0.642163 | 4.4:+41610129 | None:intergenic |
| CATCTGCGGATCAAGACACT+CGG | 0.642784 | 4.4:-41613062 | MS.gene021158:CDS |
| TCTGCGTCTTCGCACAGGAG+AGG | 0.644756 | 4.4:+41609963 | None:intergenic |
| GATTGGAGACTTATCTGGTG+TGG | 0.644922 | 4.4:+41608958 | None:intergenic |
| GAATACCACTAAGCCGTGGA+CGG | 0.647906 | 4.4:-41609798 | MS.gene021158:CDS |
| CGTTGTCGTACTGGAGAAGG+TGG | 0.649650 | 4.4:+41610021 | None:intergenic |
| AGGCTATATTTCAGACGATG+AGG | 0.652893 | 4.4:-41607725 | MS.gene021158:CDS |
| TACCACTAAGCCGTGGACGG+AGG | 0.653994 | 4.4:-41609795 | MS.gene021158:CDS |
| TGATCTGCGTCGTCGTACTG+GGG | 0.659410 | 4.4:+41610044 | None:intergenic |
| CTTAGTGGTATTCGACGCAT+CGG | 0.660302 | 4.4:+41609808 | None:intergenic |
| GCAGATCACCTTATCCTGCA+CGG | 0.663082 | 4.4:-41609999 | MS.gene021158:CDS |
| CTTCCCATAGAAGACTGCAC+AGG | 0.663283 | 4.4:+41609544 | None:intergenic |
| AACAGAGATCTCCTAGTATG+CGG | 0.664203 | 4.4:-41609846 | MS.gene021158:CDS |
| GGATACAGCGGTCTTCACGA+CGG | 0.664510 | 4.4:-41610317 | MS.gene021158:CDS |
| ACCTATTCGCTTACTAACTG+GGG | 0.667629 | 4.4:+41608453 | None:intergenic |
| AGAAGGAGACCTCTTAGGGG+AGG | 0.669972 | 4.4:+41609651 | None:intergenic |
| ACAGACCGCAAAGGACTAGA+GGG | 0.670912 | 4.4:+41609034 | None:intergenic |
| ATGGAGAATGCATTCCACGT+CGG | 0.671570 | 4.4:+41610196 | None:intergenic |
| GGAGATGGAGACCTGCGCCG+TGG | 0.671901 | 4.4:+41609721 | None:intergenic |
| CACCATCACCTATTAGACGA+AGG | 0.685718 | 4.4:-41609885 | MS.gene021158:CDS |
| TCTGCAGCATAAGAATCGCG+AGG | 0.686337 | 4.4:+41608138 | None:intergenic |
| TAGGTGATGGTGATCTACGT+CGG | 0.690454 | 4.4:+41609896 | None:intergenic |
| GATGCAGAAAGTGAACGGGA+AGG | 0.691146 | 4.4:-41612164 | MS.gene021158:intron |
| CGTCGAATACCACTAAGCCG+TGG | 0.697725 | 4.4:-41609802 | MS.gene021158:CDS |
| TTGGATGTAGGGTACATCTG+CGG | 0.702200 | 4.4:-41613076 | MS.gene021158:intron |
| ATGAGAAGGAGACCTCTTAG+GGG | 0.707295 | 4.4:+41609648 | None:intergenic |
| TTTGTAGGTGGACATGACAA+AGG | 0.709049 | 4.4:-41612643 | MS.gene021158:intron |
| CTCAAACTACTGTAGGACGG+AGG | 0.719978 | 4.4:-41611674 | MS.gene021158:intron |
| TCATCTTCTCCTATCCGACG+TGG | 0.725643 | 4.4:-41610210 | MS.gene021158:CDS |
| TCTCTCTGTACAGACCGCAA+AGG | 0.728007 | 4.4:+41609025 | None:intergenic |
| TTTCTTCTGAAAGGATACAG+CGG | 0.730863 | 4.4:-41610329 | MS.gene021158:CDS |
| GTCCACATGAAATCCCTCTG+AGG | 0.742228 | 4.4:-41608779 | MS.gene021158:CDS |
| GGTATGATAGTAGAACTCCA+CGG | 0.784949 | 4.4:-41609738 | MS.gene021158:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATTACTCATTAATAA+AGG | + | chr4.4:41610563-41610582 | None:intergenic | 10.0% |
| !! | ATATAAAATGGTAATATGAT+TGG | - | chr4.4:41612679-41612698 | MS.gene021158:intron | 15.0% |
| !! | GAATACAAAAATTTAAAAAC+AGG | + | chr4.4:41607846-41607865 | None:intergenic | 15.0% |
| !! | TACAAAATATCAAAAAACAA+TGG | + | chr4.4:41610015-41610034 | None:intergenic | 15.0% |
| !!! | AAATATAACATGTTGAATTT+TGG | - | chr4.4:41607902-41607921 | MS.gene021158:CDS | 15.0% |
| !!! | AACAAACCTTATTTAAAAAA+TGG | + | chr4.4:41611864-41611883 | None:intergenic | 15.0% |
| !!! | ACAAACCTTATTTAAAAAAT+GGG | + | chr4.4:41611863-41611882 | None:intergenic | 15.0% |
| !!! | ATTCGTTGATTTTTTTTATA+GGG | - | chr4.4:41608048-41608067 | MS.gene021158:CDS | 15.0% |
| !!! | ATTTTATTCAATTTTGAAGT+AGG | - | chr4.4:41611595-41611614 | MS.gene021158:CDS | 15.0% |
| !!! | TAGTTTATGCATATTTATTT+TGG | - | chr4.4:41612179-41612198 | MS.gene021158:intron | 15.0% |
| !!! | TTATTGTTTTTGAACTATTT+TGG | - | chr4.4:41608489-41608508 | MS.gene021158:CDS | 15.0% |
| !!! | TTGCACATTTAATTTTTATT+TGG | - | chr4.4:41610581-41610600 | MS.gene021158:intron | 15.0% |
| !!! | TTTCTATTTCATTTTCTTAT+TGG | - | chr4.4:41609512-41609531 | MS.gene021158:intron | 15.0% |
| !!! | TTTGCAGAATAATTTTTTAA+GGG | - | chr4.4:41611684-41611703 | MS.gene021158:intron | 15.0% |
| !!! | TTTTGCAGAATAATTTTTTA+AGG | - | chr4.4:41611683-41611702 | MS.gene021158:intron | 15.0% |
| !! | AAGCAAATGAATAATTGAAA+TGG | + | chr4.4:41607652-41607671 | None:intergenic | 20.0% |
| !! | AATAACCAGAATTACTATTA+TGG | - | chr4.4:41611628-41611647 | MS.gene021158:CDS | 20.0% |
| !! | AATAATGAAAGGAATAAGAA+AGG | - | chr4.4:41612651-41612670 | MS.gene021158:intron | 20.0% |
| !! | AATGAAATAGAAACAAACAT+CGG | + | chr4.4:41609505-41609524 | None:intergenic | 20.0% |
| !! | ACTTTATAAAATCATAACAC+AGG | + | chr4.4:41609604-41609623 | None:intergenic | 20.0% |
| !! | AGCATTATGATAATAATGAA+AGG | - | chr4.4:41612640-41612659 | MS.gene021158:intron | 20.0% |
| !! | ATGATTAAAAAAGAAGGAAT+CGG | + | chr4.4:41609476-41609495 | None:intergenic | 20.0% |
| !! | CACATAATGATTAAAAAAGA+AGG | + | chr4.4:41609482-41609501 | None:intergenic | 20.0% |
| !! | GAAATTCAAATACAAATTAC+TGG | - | chr4.4:41608855-41608874 | MS.gene021158:intron | 20.0% |
| !! | GAATCTAAATTAATCAATCA+AGG | + | chr4.4:41608032-41608051 | None:intergenic | 20.0% |
| !! | GTAAAAAACTTTATTCAGAA+AGG | + | chr4.4:41609080-41609099 | None:intergenic | 20.0% |
| !! | TATGCATACATAATATATAC+AGG | - | chr4.4:41609679-41609698 | MS.gene021158:CDS | 20.0% |
| !!! | AAACTCTATTATTTTGTTGT+TGG | - | chr4.4:41610091-41610110 | MS.gene021158:CDS | 20.0% |
| !!! | AACTCTATTATTTTGTTGTT+GGG | - | chr4.4:41610092-41610111 | MS.gene021158:CDS | 20.0% |
| !!! | AACTTGTTATAGTGATTTTT+TGG | - | chr4.4:41607820-41607839 | MS.gene021158:CDS | 20.0% |
| !!! | AAGTTTGTTTGATTTTTCTT+TGG | - | chr4.4:41611512-41611531 | MS.gene021158:intron | 20.0% |
| !!! | CAAATGTAGAAACTTATTTT+TGG | - | chr4.4:41611746-41611765 | MS.gene021158:intron | 20.0% |
| !!! | GATTCGTTGATTTTTTTTAT+AGG | - | chr4.4:41608047-41608066 | MS.gene021158:CDS | 20.0% |
| !!! | TAGTTATGCATATTTTTGTT+GGG | + | chr4.4:41609749-41609768 | None:intergenic | 20.0% |
| !!! | TCTACAAAATTTGTTTTTGT+TGG | + | chr4.4:41609820-41609839 | None:intergenic | 20.0% |
| !!! | TTAGTTATGCATATTTTTGT+TGG | + | chr4.4:41609750-41609769 | None:intergenic | 20.0% |
| !!! | TTTGAACTATTTTGGTTATA+CGG | - | chr4.4:41608497-41608516 | MS.gene021158:CDS | 20.0% |
| !!! | TTTTCAGATGAATTTGATTT+AGG | + | chr4.4:41612510-41612529 | None:intergenic | 20.0% |
| ! | AAAATTGAAAAACTGAACAG+AGG | + | chr4.4:41610061-41610080 | None:intergenic | 25.0% |
| ! | AACAAAAAAAACTGATGACA+AGG | - | chr4.4:41612882-41612901 | MS.gene021158:intron | 25.0% |
| ! | AATACAAATTACTGGATTCA+TGG | - | chr4.4:41608863-41608882 | MS.gene021158:intron | 25.0% |
| ! | AATTGAAATGGTGAATTCAA+CGG | + | chr4.4:41607640-41607659 | None:intergenic | 25.0% |
| ! | ACTCATTAATAAAGGCTAAA+AGG | + | chr4.4:41610555-41610574 | None:intergenic | 25.0% |
| ! | ATCTATGATAGTTCATTTAG+AGG | + | chr4.4:41608750-41608769 | None:intergenic | 25.0% |
| ! | ATTCAAGAACTCATTTAACA+GGG | + | chr4.4:41610169-41610188 | None:intergenic | 25.0% |
| ! | CAAGGTAAAAAATAAAAGCA+TGG | + | chr4.4:41608795-41608814 | None:intergenic | 25.0% |
| ! | CTCATTAATAAAGGCTAAAA+GGG | + | chr4.4:41610554-41610573 | None:intergenic | 25.0% |
| ! | TAATTGTTAATGCAAAGCAT+TGG | - | chr4.4:41609938-41609957 | MS.gene021158:CDS | 25.0% |
| ! | TACTGTATGCTATGAAATTA+GGG | - | chr4.4:41607742-41607761 | MS.gene021158:CDS | 25.0% |
| ! | TAGAACCATAATAGTAATTC+TGG | + | chr4.4:41611636-41611655 | None:intergenic | 25.0% |
| ! | TCATTAATAAAGGCTAAAAG+GGG | + | chr4.4:41610553-41610572 | None:intergenic | 25.0% |
| ! | TTAAAAAATGGGTCATGTTA+AGG | + | chr4.4:41611852-41611871 | None:intergenic | 25.0% |
| ! | TTGTATGTTGTATTAGATGT+TGG | - | chr4.4:41610030-41610049 | MS.gene021158:CDS | 25.0% |
| ! | TTTCAATCCAATATACAAGA+TGG | + | chr4.4:41610303-41610322 | None:intergenic | 25.0% |
| !! | AAAAAAAGTGCAAGGATAAA+AGG | + | chr4.4:41609054-41609073 | None:intergenic | 25.0% |
| !! | AATTGTTAATGCAAAGCATT+GGG | - | chr4.4:41609939-41609958 | MS.gene021158:CDS | 25.0% |
| !! | ACATTTTCCATCTTGTATAT+TGG | - | chr4.4:41610293-41610312 | MS.gene021158:CDS | 25.0% |
| !! | CATATTACCATTTTATATCC+TGG | + | chr4.4:41612677-41612696 | None:intergenic | 25.0% |
| !! | TGATTTTATAAAGTGAGACA+TGG | - | chr4.4:41609610-41609629 | MS.gene021158:CDS | 25.0% |
| !! | TTAAAAGAACCTTCTTTTTC+AGG | + | chr4.4:41608998-41609017 | None:intergenic | 25.0% |
| !!! | AAATGTGTTAAGAAGTGTTA+TGG | + | chr4.4:41610279-41610298 | None:intergenic | 25.0% |
| !!! | ATAAAGTTTTTTACTGTCGA+TGG | - | chr4.4:41609086-41609105 | MS.gene021158:intron | 25.0% |
| !!! | ATTAGCTTTTACTCTCTTAT+AGG | - | chr4.4:41610200-41610219 | MS.gene021158:CDS | 25.0% |
| !!! | ATTTTTTACCTTGCAACATT+CGG | - | chr4.4:41608802-41608821 | MS.gene021158:intron | 25.0% |
| !!! | CATGACCCATTTTTTAAATA+AGG | - | chr4.4:41611855-41611874 | MS.gene021158:CDS | 25.0% |
| !!! | CATGATTTTAATGTGATGAT+AGG | - | chr4.4:41611539-41611558 | MS.gene021158:intron | 25.0% |
| !!! | CCATTTTTCCTAATTATTAC+CGG | - | chr4.4:41608139-41608158 | MS.gene021158:CDS | 25.0% |
| !!! | TTTATCCTTGCACTTTTTTT+TGG | - | chr4.4:41609054-41609073 | MS.gene021158:CDS | 25.0% |
| AAAAATAAAGATCCGTTAGC+AGG | + | chr4.4:41610522-41610541 | None:intergenic | 30.0% | |
| AATTCAGAGGAAGAAAGATA+AGG | - | chr4.4:41609140-41609159 | MS.gene021158:intron | 30.0% | |
| AGTAAGCATATATGCAAAAG+CGG | + | chr4.4:41610418-41610437 | None:intergenic | 30.0% | |
| AGTCTTGATTTACCATTCAT+TGG | - | chr4.4:41609017-41609036 | MS.gene021158:CDS | 30.0% | |
| ATCCAATTCTATAGTTGTCA+AGG | + | chr4.4:41609914-41609933 | None:intergenic | 30.0% | |
| ATTAATAAAGGCTAAAAGGG+GGG | + | chr4.4:41610551-41610570 | None:intergenic | 30.0% | |
| ATTCAGTAGCATAATCTGAT+GGG | - | chr4.4:41610477-41610496 | MS.gene021158:intron | 30.0% | |
| CATTAATAAAGGCTAAAAGG+GGG | + | chr4.4:41610552-41610571 | None:intergenic | 30.0% | |
| CCGGTAATAATTAGGAAAAA+TGG | + | chr4.4:41608142-41608161 | None:intergenic | 30.0% | |
| GATTCAAGAACTCATTTAAC+AGG | + | chr4.4:41610170-41610189 | None:intergenic | 30.0% | |
| GGAATTCGAAAATGATTTAC+TGG | + | chr4.4:41610379-41610398 | None:intergenic | 30.0% | |
| GTACTGTATGCTATGAAATT+AGG | - | chr4.4:41607741-41607760 | MS.gene021158:CDS | 30.0% | |
| GTCTTGATTTACCATTCATT+GGG | - | chr4.4:41609018-41609037 | MS.gene021158:CDS | 30.0% | |
| GTGCTTATTAACTTCATACA+TGG | - | chr4.4:41608445-41608464 | MS.gene021158:CDS | 30.0% | |
| TAAGGAGAGTAAAGATATCA+TGG | - | chr4.4:41609158-41609177 | MS.gene021158:intron | 30.0% | |
| TAATACTATTTGTTCGTTGC+TGG | - | chr4.4:41609202-41609221 | MS.gene021158:intron | 30.0% | |
| TATGCTTACTTAGTTTCGTT+TGG | - | chr4.4:41610428-41610447 | MS.gene021158:intron | 30.0% | |
| TCACATCAAAAAAATAGCAG+AGG | + | chr4.4:41608316-41608335 | None:intergenic | 30.0% | |
| TCTGTACAGAGAGATAAAAA+TGG | - | chr4.4:41611981-41612000 | MS.gene021158:intron | 30.0% | |
| TTCATAACACAGTAGTTTGA+GGG | + | chr4.4:41609715-41609734 | None:intergenic | 30.0% | |
| TTCCAAATTTCAAAAGCAGT+TGG | + | chr4.4:41608229-41608248 | None:intergenic | 30.0% | |
| TTCCTTGACAACTATAGAAT+TGG | - | chr4.4:41609909-41609928 | MS.gene021158:CDS | 30.0% | |
| TTCTAGGTTTGAATACGAAT+TGG | - | chr4.4:41612357-41612376 | MS.gene021158:intron | 30.0% | |
| TTGAATGTAATCACGTTTGT+CGG | + | chr4.4:41608114-41608133 | None:intergenic | 30.0% | |
| ! | ACATGTTGAATTTTGGATGT+AGG | - | chr4.4:41607909-41607928 | MS.gene021158:CDS | 30.0% |
| ! | ACTCATTTAACAGGGTTTTT+AGG | + | chr4.4:41610161-41610180 | None:intergenic | 30.0% |
| ! | ATGTTTTCAGCTTCTTAAAG+TGG | - | chr4.4:41609573-41609592 | MS.gene021158:CDS | 30.0% |
| ! | CAGAAGAAGCATATTATTCT+AGG | - | chr4.4:41612341-41612360 | MS.gene021158:intron | 30.0% |
| ! | CAGTTTTCAATTCACCTTAT+CGG | - | chr4.4:41610248-41610267 | MS.gene021158:CDS | 30.0% |
| ! | CATGTTGAATTTTGGATGTA+GGG | - | chr4.4:41607910-41607929 | MS.gene021158:CDS | 30.0% |
| ! | CTTGAAAAATGATTTGTAGG+TGG | - | chr4.4:41608342-41608361 | MS.gene021158:CDS | 30.0% |
| ! | GTGCTTGAAAAATGATTTGT+AGG | - | chr4.4:41608339-41608358 | MS.gene021158:CDS | 30.0% |
| ! | TTGCTGGATTACGTTTTATA+GGG | - | chr4.4:41609218-41609237 | MS.gene021158:intron | 30.0% |
| ! | TTTTATAAAGTGAGACATGG+TGG | - | chr4.4:41609613-41609632 | MS.gene021158:CDS | 30.0% |
| !! | GTCATTTTGAACTAATGTCA+AGG | - | chr4.4:41610608-41610627 | MS.gene021158:CDS | 30.0% |
| !! | TTTCTTATTGGTTTCACAGT+GGG | - | chr4.4:41609524-41609543 | MS.gene021158:intron | 30.0% |
| !! | TTTTGGTTATACGGTAATCT+TGG | - | chr4.4:41608506-41608525 | MS.gene021158:CDS | 30.0% |
| !!! | GTATTTTGATACCCAATGAA+TGG | + | chr4.4:41609032-41609051 | None:intergenic | 30.0% |
| !!! | TTACCTTCTATTTTTACTGC+TGG | + | chr4.4:41612096-41612115 | None:intergenic | 30.0% |
| !!! | TTCCAACTGCTTTTGAAATT+TGG | - | chr4.4:41608224-41608243 | MS.gene021158:intron | 30.0% |
| !!! | TTTTCTTATTGGTTTCACAG+TGG | - | chr4.4:41609523-41609542 | MS.gene021158:intron | 30.0% |
| !!! | TTTTTTACTGTCGATGGATT+AGG | - | chr4.4:41609092-41609111 | MS.gene021158:intron | 30.0% |
| AAAATTTCACAGCTCCAAAC+AGG | + | chr4.4:41611667-41611686 | None:intergenic | 35.0% | |
| AACCTATTCGCTTACTAACT+GGG | + | chr4.4:41612548-41612567 | None:intergenic | 35.0% | |
| AAGAGTTGTATGAGAAGTCA+AGG | + | chr4.4:41612123-41612142 | None:intergenic | 35.0% | |
| AAGCTCTTTCATGAACTTAC+CGG | + | chr4.4:41608898-41608917 | None:intergenic | 35.0% | |
| ACACTGTACATCTCTGATAA+TGG | - | chr4.4:41612738-41612757 | MS.gene021158:intron | 35.0% | |
| ACGGTAATCTTGGAGATTAA+TGG | - | chr4.4:41608516-41608535 | MS.gene021158:intron | 35.0% | |
| ACTATCATACCTTCGCATTA+TGG | + | chr4.4:41611250-41611269 | None:intergenic | 35.0% | |
| ACTTCTAAACTTGTGCCTTA+AGG | + | chr4.4:41611726-41611745 | None:intergenic | 35.0% | |
| AGAAAGGCCAGGATATAAAA+TGG | - | chr4.4:41612667-41612686 | MS.gene021158:intron | 35.0% | |
| AGAAGAACTCCTGAAAAAGA+AGG | - | chr4.4:41608986-41609005 | MS.gene021158:CDS | 35.0% | |
| AGAAGATTTATCACTGCCAA+AGG | + | chr4.4:41612770-41612789 | None:intergenic | 35.0% | |
| AGACCAGCAGTAAAAATAGA+AGG | - | chr4.4:41612090-41612109 | MS.gene021158:CDS | 35.0% | |
| AGAGAGAAATTGACCATTGA+AGG | - | chr4.4:41612247-41612266 | MS.gene021158:intron | 35.0% | |
| AGTATATGCAGATCTCCAAA+GGG | - | chr4.4:41610631-41610650 | MS.gene021158:CDS | 35.0% | |
| AGTGATAAATCTTCTGGCAA+GGG | - | chr4.4:41612775-41612794 | MS.gene021158:intron | 35.0% | |
| ATGATTCTGAGTTAGAAGAC+AGG | - | chr4.4:41613118-41613137 | MS.gene021158:intron | 35.0% | |
| ATGCATAAACTAACTACTGC+AGG | + | chr4.4:41612171-41612190 | None:intergenic | 35.0% | |
| ATTACAAACCGAATGTTGCA+AGG | + | chr4.4:41608813-41608832 | None:intergenic | 35.0% | |
| CATATACACCATGATGTTTG+AGG | + | chr4.4:41608252-41608271 | None:intergenic | 35.0% | |
| CATTCAGTAGCATAATCTGA+TGG | - | chr4.4:41610476-41610495 | MS.gene021158:intron | 35.0% | |
| CTATCATACCTTCGCATTAT+GGG | + | chr4.4:41611249-41611268 | None:intergenic | 35.0% | |
| CTGAAAATGAAGAGTAAACC+AGG | - | chr4.4:41613252-41613271 | MS.gene021158:intron | 35.0% | |
| CTGTATCCTTTCAGAAGAAA+TGG | + | chr4.4:41610668-41610687 | None:intergenic | 35.0% | |
| CTTCATAACACAGTAGTTTG+AGG | + | chr4.4:41609716-41609735 | None:intergenic | 35.0% | |
| CTTCTAAACTTGTGCCTTAA+GGG | + | chr4.4:41611725-41611744 | None:intergenic | 35.0% | |
| GAAAAAAACTCCTTGTTCAC+TGG | + | chr4.4:41612829-41612848 | None:intergenic | 35.0% | |
| GATAAAAATGGCAAAGCTTC+AGG | - | chr4.4:41611993-41612012 | MS.gene021158:intron | 35.0% | |
| GATCTTCTCCTTGAATAAGA+TGG | + | chr4.4:41610757-41610776 | None:intergenic | 35.0% | |
| GGATAACAAGTGAAATTCAG+AGG | - | chr4.4:41609127-41609146 | MS.gene021158:intron | 35.0% | |
| GGATTCATGGAAAAAAACAC+CGG | - | chr4.4:41608876-41608895 | MS.gene021158:intron | 35.0% | |
| GGTGCAAAAAATATTGTCAC+CGG | - | chr4.4:41611929-41611948 | MS.gene021158:intron | 35.0% | |
| GTAAAGATATCATGGAAGAG+AGG | - | chr4.4:41609166-41609185 | MS.gene021158:intron | 35.0% | |
| GTAAGTTCATGAAAGAGCTT+TGG | - | chr4.4:41608898-41608917 | MS.gene021158:intron | 35.0% | |
| GTAATGATGCAGAAAGTGAA+CGG | - | chr4.4:41608828-41608847 | MS.gene021158:intron | 35.0% | |
| TAACTTCATACATGGTCTTC+TGG | - | chr4.4:41608453-41608472 | MS.gene021158:CDS | 35.0% | |
| TAAGGTGAATTGAAAACTGC+AGG | + | chr4.4:41610247-41610266 | None:intergenic | 35.0% | |
| TAATGATGCAGAAAGTGAAC+GGG | - | chr4.4:41608829-41608848 | MS.gene021158:intron | 35.0% | |
| TATCATACCTTCGCATTATG+GGG | + | chr4.4:41611248-41611267 | None:intergenic | 35.0% | |
| TGTGCATTCAATGTCTTGAA+AGG | - | chr4.4:41611773-41611792 | MS.gene021158:intron | 35.0% | |
| TTGCTTGTGGTGATATTGAT+CGG | + | chr4.4:41612064-41612083 | None:intergenic | 35.0% | |
| TTTCAGCTTCTTAAAGTGGA+TGG | - | chr4.4:41609577-41609596 | MS.gene021158:CDS | 35.0% | |
| TTTGGCAGTGATAAATCTTC+TGG | - | chr4.4:41612769-41612788 | MS.gene021158:intron | 35.0% | |
| ! | AAAGGCCAAAAAAAAGTGCA+AGG | + | chr4.4:41609062-41609081 | None:intergenic | 35.0% |
| ! | ACAACTCTTTTATCTGCTCA+TGG | - | chr4.4:41612134-41612153 | MS.gene021158:CDS | 35.0% |
| ! | AGCTAGCTTCTGCAATTATT+TGG | - | chr4.4:41609285-41609304 | MS.gene021158:intron | 35.0% |
| ! | AGGATAGGAGAAAGCATAAA+AGG | - | chr4.4:41613055-41613074 | MS.gene021158:CDS | 35.0% |
| ! | ATTTGGAACCTCAAACATCA+TGG | - | chr4.4:41608241-41608260 | MS.gene021158:intron | 35.0% |
| ! | GCTAGCTTCTGCAATTATTT+GGG | - | chr4.4:41609286-41609305 | MS.gene021158:intron | 35.0% |
| ! | GTGTCTGCTATCAAAAGTAT+CGG | + | chr4.4:41608092-41608111 | None:intergenic | 35.0% |
| ! | GTTGCTGGATTACGTTTTAT+AGG | - | chr4.4:41609217-41609236 | MS.gene021158:intron | 35.0% |
| ! | GTTTTATAGGGCTGAGATTT+TGG | - | chr4.4:41609230-41609249 | MS.gene021158:intron | 35.0% |
| ! | TTTCTTCTGAAAGGATACAG+CGG | - | chr4.4:41610668-41610687 | MS.gene021158:intron | 35.0% |
| !! | AATGTTAACTTGTGCCCTTA+AGG | - | chr4.4:41611708-41611727 | MS.gene021158:intron | 35.0% |
| !! | AGGATGAGTTTTATCCTGAA+AGG | - | chr4.4:41612589-41612608 | MS.gene021158:CDS | 35.0% |
| !! | CTGATAATGGTAAACTCCTT+TGG | - | chr4.4:41612751-41612770 | MS.gene021158:intron | 35.0% |
| !! | GATTCTGTTTCTGAAGAAAG+TGG | - | chr4.4:41613012-41613031 | MS.gene021158:CDS | 35.0% |
| !! | GGATGAGTTTTATCCTGAAA+GGG | - | chr4.4:41612590-41612609 | MS.gene021158:CDS | 35.0% |
| !! | GTATTTGCTATCTTTGACAG+AGG | - | chr4.4:41610336-41610355 | MS.gene021158:CDS | 35.0% |
| !! | TGTGTTAAGAAGTGTTATGG+TGG | + | chr4.4:41610276-41610295 | None:intergenic | 35.0% |
| !!! | GTCACTTTTCTAGTAATCCA+AGG | + | chr4.4:41608400-41608419 | None:intergenic | 35.0% |
| !!! | GTGAACAAGGAGTTTTTTTC+TGG | - | chr4.4:41612829-41612848 | MS.gene021158:intron | 35.0% |
| AACAGAGATCTCCTAGTATG+CGG | - | chr4.4:41611151-41611170 | MS.gene021158:intron | 40.0% | |
| AAGAAAGTGGCAAGCATAGA+AGG | - | chr4.4:41613025-41613044 | MS.gene021158:CDS | 40.0% | |
| AAGCGGACCTTGAATAACTT+CGG | + | chr4.4:41610401-41610420 | None:intergenic | 40.0% | |
| ACCTATTCGCTTACTAACTG+GGG | + | chr4.4:41612547-41612566 | None:intergenic | 40.0% | |
| AGAAAGTGGCAAGCATAGAA+GGG | - | chr4.4:41613026-41613045 | MS.gene021158:CDS | 40.0% | |
| AGCTCAATCTCAAGCTTCTT+TGG | + | chr4.4:41613348-41613367 | None:intergenic | 40.0% | |
| AGGATGGAAAACAAACTGAC+AGG | - | chr4.4:41609417-41609436 | MS.gene021158:intron | 40.0% | |
| AGGCTATATTTCAGACGATG+AGG | - | chr4.4:41613272-41613291 | MS.gene021158:intron | 40.0% | |
| AGGTGAATATGGACGTAATG+AGG | - | chr4.4:41608374-41608393 | MS.gene021158:CDS | 40.0% | |
| ATAAACTAACTACTGCAGGC+AGG | + | chr4.4:41612167-41612186 | None:intergenic | 40.0% | |
| ATAGAAGGGATGGAAAGGAT+AGG | - | chr4.4:41613040-41613059 | MS.gene021158:CDS | 40.0% | |
| ATAGGAGGCCATCTTATTCA+AGG | - | chr4.4:41610746-41610765 | MS.gene021158:intron | 40.0% | |
| ATCATACCTTCGCATTATGG+GGG | + | chr4.4:41611247-41611266 | None:intergenic | 40.0% | |
| ATCTGCCAAATTTCATCACG+AGG | - | chr4.4:41612569-41612588 | MS.gene021158:CDS | 40.0% | |
| ATGGTTCTTCACCATCACTT+TGG | + | chr4.4:41613320-41613339 | None:intergenic | 40.0% | |
| CAGTGATAAATCTTCTGGCA+AGG | - | chr4.4:41612774-41612793 | MS.gene021158:intron | 40.0% | |
| CATGCTCTTCTTTGCTTTGA+GGG | + | chr4.4:41613391-41613410 | None:intergenic | 40.0% | |
| CCCACTAGAAAGACTTCATA+CGG | + | chr4.4:41609857-41609876 | None:intergenic | 40.0% | |
| CCTTTACCTCAAACTACTGT+AGG | - | chr4.4:41609316-41609335 | MS.gene021158:intron | 40.0% | |
| CGAATTCCCGAAGTTATTCA+AGG | - | chr4.4:41610391-41610410 | MS.gene021158:intron | 40.0% | |
| CGTTGACACCGGTAATAATT+AGG | + | chr4.4:41608150-41608169 | None:intergenic | 40.0% | |
| CTCATCCTCGTGATGAAATT+TGG | + | chr4.4:41612577-41612596 | None:intergenic | 40.0% | |
| GAACCTATTCGCTTACTAAC+TGG | + | chr4.4:41612549-41612568 | None:intergenic | 40.0% | |
| GAACTCCATTCATCATGAGA+AGG | + | chr4.4:41611366-41611385 | None:intergenic | 40.0% | |
| GAGCAAGGAACAGGTAAAAT+CGG | - | chr4.4:41609450-41609469 | MS.gene021158:intron | 40.0% | |
| GAGTATATGCAGATCTCCAA+AGG | - | chr4.4:41610630-41610649 | MS.gene021158:CDS | 40.0% | |
| GGAAAACAAACTGACAGGAA+TGG | - | chr4.4:41609422-41609441 | MS.gene021158:intron | 40.0% | |
| GGACATGACAAAGGTGAATA+TGG | - | chr4.4:41608363-41608382 | MS.gene021158:CDS | 40.0% | |
| GGTATGATAGTAGAACTCCA+CGG | - | chr4.4:41611259-41611278 | MS.gene021158:intron | 40.0% | |
| GTTCTACTCCATATCCTGTT+TGG | - | chr4.4:41611650-41611669 | MS.gene021158:CDS | 40.0% | |
| TAAGTCACAGAAGTTTGCAC+CGG | - | chr4.4:41607984-41608003 | MS.gene021158:CDS | 40.0% | |
| TAATATATACAGGCCCTCAC+TGG | - | chr4.4:41609689-41609708 | MS.gene021158:CDS | 40.0% | |
| TACCTCAAACTACTGTAGGA+CGG | - | chr4.4:41609320-41609339 | MS.gene021158:intron | 40.0% | |
| TCAAGCTTCTTTGGATCGTA+TGG | + | chr4.4:41613339-41613358 | None:intergenic | 40.0% | |
| TCATGCTCTTCTTTGCTTTG+AGG | + | chr4.4:41613392-41613411 | None:intergenic | 40.0% | |
| TGAAAGGAATAAGAAAGGCC+AGG | - | chr4.4:41612656-41612675 | MS.gene021158:intron | 40.0% | |
| TGAGATTGAGCTGCGTAATA+AGG | - | chr4.4:41613356-41613375 | MS.gene021158:intron | 40.0% | |
| TGAGTTAGAAGACAGGAAAG+AGG | - | chr4.4:41613125-41613144 | MS.gene021158:intron | 40.0% | |
| TGTGGTGATATTGATCGGAT+TGG | + | chr4.4:41612059-41612078 | None:intergenic | 40.0% | |
| TTGAAAACTGCAGGTGAATG+TGG | + | chr4.4:41610238-41610257 | None:intergenic | 40.0% | |
| TTTGTAGGTGGACATGACAA+AGG | - | chr4.4:41608354-41608373 | MS.gene021158:CDS | 40.0% | |
| ! | CCGTATGAAGTCTTTCTAGT+GGG | - | chr4.4:41609854-41609873 | MS.gene021158:CDS | 40.0% |
| ! | CCTACAGTAGTTTGAGGTAA+AGG | + | chr4.4:41609319-41609338 | None:intergenic | 40.0% |
| ! | GAAGTCTTTCTAGTGGGATA+AGG | - | chr4.4:41609860-41609879 | MS.gene021158:CDS | 40.0% |
| ! | TCATCGTCTGAAATATAGCC+TGG | + | chr4.4:41613273-41613292 | None:intergenic | 40.0% |
| !! | AGATCCAACTTTGAAGTCCA+GGG | - | chr4.4:41609376-41609395 | MS.gene021158:intron | 40.0% |
| !! | CTAGAGGGTTGATAAACTTC+CGG | + | chr4.4:41611951-41611970 | None:intergenic | 40.0% |
| !! | GAAGGCACTCAAGATTTAGT+TGG | - | chr4.4:41612955-41612974 | MS.gene021158:intron | 40.0% |
| !! | TATGGTCTGTTGGCTTCTTT+GGG | + | chr4.4:41612285-41612304 | None:intergenic | 40.0% |
| !! | TTATGGTCTGTTGGCTTCTT+TGG | + | chr4.4:41612286-41612305 | None:intergenic | 40.0% |
| !!! | ATTTTTTGCACCCTGCAACA+TGG | + | chr4.4:41611921-41611940 | None:intergenic | 40.0% |
| !!! | TTTTTTGCACCCTGCAACAT+GGG | + | chr4.4:41611920-41611939 | None:intergenic | 40.0% |
| AAGACTGCACAGGACTTCTT+TGG | + | chr4.4:41611446-41611465 | None:intergenic | 45.0% | |
| AAGACTTCATACGGCGACTT+AGG | + | chr4.4:41609848-41609867 | None:intergenic | 45.0% | |
| AAGTCCTGTGCAGTCTTCTA+TGG | - | chr4.4:41611449-41611468 | MS.gene021158:intron | 45.0% | |
| AATAAAGGCTAAAAGGGGGG+CGG | + | chr4.4:41610548-41610567 | None:intergenic | 45.0% | |
| ACAGAAGTCACCAGTGAACA+AGG | - | chr4.4:41612816-41612835 | MS.gene021158:intron | 45.0% | |
| ACAGAAGTTTGCACCGGAAT+TGG | - | chr4.4:41607990-41608009 | MS.gene021158:CDS | 45.0% | |
| ACAGGTGATCTATGCTGCAA+AGG | + | chr4.4:41611300-41611319 | None:intergenic | 45.0% | |
| ACTAGGAGATCTCTGTTGCA+GGG | + | chr4.4:41611148-41611167 | None:intergenic | 45.0% | |
| AGAAAAGTGACCGAGCTTCT+TGG | - | chr4.4:41608409-41608428 | MS.gene021158:CDS | 45.0% | |
| AGCGGACCTTGAATAACTTC+GGG | + | chr4.4:41610400-41610419 | None:intergenic | 45.0% | |
| AGTCCTGTGCAGTCTTCTAT+GGG | - | chr4.4:41611450-41611469 | MS.gene021158:intron | 45.0% | |
| AGTCTTCTATGGGAAGAGTC+AGG | - | chr4.4:41611460-41611479 | MS.gene021158:intron | 45.0% | |
| AGTGCACAGAAAAATGCCAG+TGG | - | chr4.4:41608933-41608952 | MS.gene021158:CDS | 45.0% | |
| ATATGGACGTAATGAGGCCT+TGG | - | chr4.4:41608380-41608399 | MS.gene021158:CDS | 45.0% | |
| ATCAACCCTCTAGTCCTTTG+CGG | - | chr4.4:41611958-41611977 | MS.gene021158:intron | 45.0% | |
| ATGAGAAGGAGACCTCTTAG+GGG | + | chr4.4:41611352-41611371 | None:intergenic | 45.0% | |
| ATGGAGAATGCATTCCACGT+CGG | + | chr4.4:41610804-41610823 | None:intergenic | 45.0% | |
| CAAACCAGATGCTCCAATTC+CGG | + | chr4.4:41608006-41608025 | None:intergenic | 45.0% | |
| CAAGCATAGAAGGGATGGAA+AGG | - | chr4.4:41613035-41613054 | MS.gene021158:CDS | 45.0% | |
| CACAAAGATCTCCTCATAGG+AGG | - | chr4.4:41610731-41610750 | MS.gene021158:intron | 45.0% | |
| CACCACAAAGATCTCCTCAT+AGG | - | chr4.4:41610728-41610747 | MS.gene021158:intron | 45.0% | |
| CACCATCACCTATTAGACGA+AGG | - | chr4.4:41611112-41611131 | MS.gene021158:intron | 45.0% | |
| CAGCATAGATCACCTGTTTC+GGG | - | chr4.4:41611303-41611322 | MS.gene021158:intron | 45.0% | |
| CATGAGAAGGAGACCTCTTA+GGG | + | chr4.4:41611353-41611372 | None:intergenic | 45.0% | |
| CTCCTATGAGGAGATCTTTG+TGG | + | chr4.4:41610733-41610752 | None:intergenic | 45.0% | |
| CTTAGTGGTATTCGACGCAT+CGG | + | chr4.4:41611192-41611211 | None:intergenic | 45.0% | |
| GAAAAGTGACCGAGCTTCTT+GGG | - | chr4.4:41608410-41608429 | MS.gene021158:CDS | 45.0% | |
| GAATAAGATGGCCTCCTATG+AGG | + | chr4.4:41610745-41610764 | None:intergenic | 45.0% | |
| GAATCCCTGGACTTCAAAGT+TGG | + | chr4.4:41609383-41609402 | None:intergenic | 45.0% | |
| GACCTTCGTCTAATAGGTGA+TGG | + | chr4.4:41611117-41611136 | None:intergenic | 45.0% | |
| GATAAATCTTCTGGCAAGGG+AGG | - | chr4.4:41612778-41612797 | MS.gene021158:intron | 45.0% | |
| GATCAGCACCACAAATCAGA+AGG | - | chr4.4:41612937-41612956 | MS.gene021158:intron | 45.0% | |
| GATCTATGCTGCAAAGGAGA+TGG | + | chr4.4:41611294-41611313 | None:intergenic | 45.0% | |
| GATTGGAGACTTATCTGGTG+TGG | + | chr4.4:41612042-41612061 | None:intergenic | 45.0% | |
| GCAGCATAGATCACCTGTTT+CGG | - | chr4.4:41611302-41611321 | MS.gene021158:intron | 45.0% | |
| GCCGTATGAAGTCTTTCTAG+TGG | - | chr4.4:41609853-41609872 | MS.gene021158:CDS | 45.0% | |
| GCGCTCTCTACAAGAGAAAT+AGG | + | chr4.4:41612481-41612500 | None:intergenic | 45.0% | |
| GGATGTCATGGCTAGGTTTA+TGG | + | chr4.4:41612303-41612322 | None:intergenic | 45.0% | |
| GGCGTTCCATTTCTTCTGAA+AGG | - | chr4.4:41610659-41610678 | MS.gene021158:intron | 45.0% | |
| GGTCTCCTTCTCATGATGAA+TGG | - | chr4.4:41611358-41611377 | MS.gene021158:intron | 45.0% | |
| GTCTTCAAACCCAAGAAGCT+CGG | + | chr4.4:41608422-41608441 | None:intergenic | 45.0% | |
| TACTAGGAGATCTCTGTTGC+AGG | + | chr4.4:41611149-41611168 | None:intergenic | 45.0% | |
| TATCTCCATCTCCAGTCAGA+AGG | - | chr4.4:41611403-41611422 | MS.gene021158:intron | 45.0% | |
| TCACAGCTCCAAACAGGATA+TGG | + | chr4.4:41611661-41611680 | None:intergenic | 45.0% | |
| TCAGGTACAGTGACACTTGA+GGG | - | chr4.4:41611478-41611497 | MS.gene021158:intron | 45.0% | |
| TCATGAGAAGGAGACCTCTT+AGG | + | chr4.4:41611354-41611373 | None:intergenic | 45.0% | |
| TCCCCAGTTAGTAAGCGAAT+AGG | - | chr4.4:41612543-41612562 | MS.gene021158:CDS | 45.0% | |
| TGGCTAGGTTTATGGTCTGT+TGG | + | chr4.4:41612295-41612314 | None:intergenic | 45.0% | |
| TGTTCAGCTTTGCCTGCTAA+CGG | - | chr4.4:41610507-41610526 | MS.gene021158:intron | 45.0% | |
| TTAGCATCCAAGAACTGCTG+AGG | + | chr4.4:41608963-41608982 | None:intergenic | 45.0% | |
| TTGGATGTAGGGTACATCTG+CGG | - | chr4.4:41607921-41607940 | MS.gene021158:CDS | 45.0% | |
| ! | AAAGTGAGACATGGTGGAAG+TGG | - | chr4.4:41609619-41609638 | MS.gene021158:CDS | 45.0% |
| ! | ACAGGAATGGTGTTAGAGCA+AGG | - | chr4.4:41609435-41609454 | MS.gene021158:intron | 45.0% |
| ! | ATGGTGTTAGAGCAAGGAAC+AGG | - | chr4.4:41609441-41609460 | MS.gene021158:intron | 45.0% |
| ! | CTTGAGTGCCTTCTGATTTG+TGG | + | chr4.4:41612948-41612967 | None:intergenic | 45.0% |
| ! | CTTTCTAGTGGGATAAGGCT+TGG | - | chr4.4:41609865-41609884 | MS.gene021158:CDS | 45.0% |
| ! | GATCGGATTGGAGACTTATC+TGG | + | chr4.4:41612047-41612066 | None:intergenic | 45.0% |
| ! | GATCTTTTCTTGCCCGAAAC+AGG | + | chr4.4:41611318-41611337 | None:intergenic | 45.0% |
| ! | TAGGTGATGGTGATCTACGT+CGG | + | chr4.4:41611104-41611123 | None:intergenic | 45.0% |
| ! | TCTCTCTTGTTTGCCTCAGA+GGG | + | chr4.4:41612234-41612253 | None:intergenic | 45.0% |
| ! | TGGATTAGGCTGAAAGCGAT+AGG | - | chr4.4:41609106-41609125 | MS.gene021158:intron | 45.0% |
| ! | TTCTCTCTTGTTTGCCTCAG+AGG | + | chr4.4:41612235-41612254 | None:intergenic | 45.0% |
| ! | TTGTTGTTGGGCCAGTGTTT+GGG | - | chr4.4:41610104-41610123 | MS.gene021158:CDS | 45.0% |
| !! | ACAGGACTTCTTTGGAGTCT+TGG | + | chr4.4:41611438-41611457 | None:intergenic | 45.0% |
| !! | ACTTTGAAGTCCAGGGATTC+AGG | - | chr4.4:41609383-41609402 | MS.gene021158:intron | 45.0% |
| !! | AGAGAGCATCTTGGTGAACT+CGG | - | chr4.4:41610128-41610147 | MS.gene021158:CDS | 45.0% |
| !! | ATGGTCTGTTGGCTTCTTTG+GGG | + | chr4.4:41612284-41612303 | None:intergenic | 45.0% |
| !! | CAGATCCAACTTTGAAGTCC+AGG | - | chr4.4:41609375-41609394 | MS.gene021158:intron | 45.0% |
| !! | CTGGTCTTACTTCTTGCTTG+TGG | + | chr4.4:41612077-41612096 | None:intergenic | 45.0% |
| !! | CTTTGAAGTCCAGGGATTCA+GGG | - | chr4.4:41609384-41609403 | MS.gene021158:intron | 45.0% |
| !! | GTGTTATGGTGGTACCGATA+AGG | + | chr4.4:41610265-41610284 | None:intergenic | 45.0% |
| !! | TTTGTTGTTGGGCCAGTGTT+TGG | - | chr4.4:41610103-41610122 | MS.gene021158:CDS | 45.0% |
| !!! | GTGGTGCTGATCACTACTTT+TGG | + | chr4.4:41612929-41612948 | None:intergenic | 45.0% |
| AAGACAGGAAAGAGGCCAAG+AGG | - | chr4.4:41613133-41613152 | MS.gene021158:intron | 50.0% | |
| AATGTAGTGCCCTGAATCCC+TGG | + | chr4.4:41609396-41609415 | None:intergenic | 50.0% | |
| ACAGACCGCAAAGGACTAGA+GGG | + | chr4.4:41611966-41611985 | None:intergenic | 50.0% | |
| ACGATGAGGAAGCTGAACGA+AGG | - | chr4.4:41613286-41613305 | MS.gene021158:intron | 50.0% | |
| ACTGGTGACTTCTGTTGACC+AGG | + | chr4.4:41612811-41612830 | None:intergenic | 50.0% | |
| AGAGGCCAAGAGGAGGAAAA+AGG | - | chr4.4:41613143-41613162 | MS.gene021158:intron | 50.0% | |
| AGGGATGGTCACCAAAGTGA+TGG | - | chr4.4:41613306-41613325 | MS.gene021158:intron | 50.0% | |
| AGTAGTTTGAGGGCCAGTGA+GGG | + | chr4.4:41609705-41609724 | None:intergenic | 50.0% | |
| AGTGGCAAGCATAGAAGGGA+TGG | - | chr4.4:41613030-41613049 | MS.gene021158:CDS | 50.0% | |
| ATAAAGGCTAAAAGGGGGGC+GGG | + | chr4.4:41610547-41610566 | None:intergenic | 50.0% | |
| ATCGAAAGCGGGAAGAGAGA+CGG | - | chr4.4:41613199-41613218 | MS.gene021158:intron | 50.0% | |
| CAACGTGTTAGTGTGGTGTC+TGG | - | chr4.4:41608165-41608184 | MS.gene021158:CDS | 50.0% | |
| CATCTGCGGATCAAGACACT+CGG | - | chr4.4:41607935-41607954 | MS.gene021158:CDS | 50.0% | |
| CCACACTAACACGTTGACAC+CGG | + | chr4.4:41608161-41608180 | None:intergenic | 50.0% | |
| CGATGAGGAAGCTGAACGAA+GGG | - | chr4.4:41613287-41613306 | MS.gene021158:intron | 50.0% | |
| CGCATTATGGGGGATTGCAT+TGG | + | chr4.4:41611237-41611256 | None:intergenic | 50.0% | |
| CTACGTCGTCGTATAGGAGA+AGG | + | chr4.4:41611063-41611082 | None:intergenic | 50.0% | |
| CTAGGAGATCTCTGTTGCAG+GGG | + | chr4.4:41611147-41611166 | None:intergenic | 50.0% | |
| CTCAAACTACTGTAGGACGG+AGG | - | chr4.4:41609323-41609342 | MS.gene021158:intron | 50.0% | |
| CTCCGTCCTACAGTAGTTTG+AGG | + | chr4.4:41609325-41609344 | None:intergenic | 50.0% | |
| CTGCGTCTTTGAACAGGAGA+GGG | + | chr4.4:41610844-41610863 | None:intergenic | 50.0% | |
| CTTCATACGGCGACTTAGGA+AGG | + | chr4.4:41609844-41609863 | None:intergenic | 50.0% | |
| CTTCCCATAGAAGACTGCAC+AGG | + | chr4.4:41611456-41611475 | None:intergenic | 50.0% | |
| CTTTGTGGTGAACGTCTTCG+AGG | + | chr4.4:41610718-41610737 | None:intergenic | 50.0% | |
| GAACACCCTCTCCTGTTAGA+CGG | - | chr4.4:41610863-41610882 | MS.gene021158:intron | 50.0% | |
| GAAGAAGAAGCTGCGAAAGG+AGG | - | chr4.4:41613170-41613189 | MS.gene021158:intron | 50.0% | |
| GAATACCACTAAGCCGTGGA+CGG | - | chr4.4:41611199-41611218 | MS.gene021158:intron | 50.0% | |
| GAATGCATTCCACGTCGGAT+AGG | + | chr4.4:41610799-41610818 | None:intergenic | 50.0% | |
| GAGGGTGACCTTCGTCTAAT+AGG | + | chr4.4:41611123-41611142 | None:intergenic | 50.0% | |
| GATCTCCGTCTAACAGGAGA+GGG | + | chr4.4:41610871-41610890 | None:intergenic | 50.0% | |
| GATGCAGAAAGTGAACGGGA+AGG | - | chr4.4:41608833-41608852 | MS.gene021158:intron | 50.0% | |
| GCAGATCACCTTATCCTGCA+CGG | - | chr4.4:41610998-41611017 | MS.gene021158:intron | 50.0% | |
| GGAAGAGAGACGGCGAAAAA+GGG | - | chr4.4:41613209-41613228 | MS.gene021158:intron | 50.0% | |
| GGAAGAGAGGCTGAAGAAAC+TGG | - | chr4.4:41609179-41609198 | MS.gene021158:intron | 50.0% | |
| GGAGAAGAAGAAGCTGCGAA+AGG | - | chr4.4:41613167-41613186 | MS.gene021158:intron | 50.0% | |
| GGGACTCAAGCTTCCTTCAA+TGG | + | chr4.4:41612263-41612282 | None:intergenic | 50.0% | |
| GGTGAAGTTCTCCTTCTGAC+TGG | + | chr4.4:41611417-41611436 | None:intergenic | 50.0% | |
| GGTGATCTACGTCGTCGTAT+AGG | + | chr4.4:41611069-41611088 | None:intergenic | 50.0% | |
| GGTGTTCTGCGTCTTTGAAC+AGG | + | chr4.4:41610850-41610869 | None:intergenic | 50.0% | |
| GTCAGGTACAGTGACACTTG+AGG | - | chr4.4:41611477-41611496 | MS.gene021158:intron | 50.0% | |
| GTCCACATGAAATCCCTCTG+AGG | - | chr4.4:41612218-41612237 | MS.gene021158:intron | 50.0% | |
| GTGGTGATACCCATGTTGCA+GGG | - | chr4.4:41611908-41611927 | MS.gene021158:intron | 50.0% | |
| GTTCTCCTTCTGACTGGAGA+TGG | + | chr4.4:41611411-41611430 | None:intergenic | 50.0% | |
| TACAGACCGCAAAGGACTAG+AGG | + | chr4.4:41611967-41611986 | None:intergenic | 50.0% | |
| TCATCTTCTCCTATCCGACG+TGG | - | chr4.4:41610787-41610806 | MS.gene021158:intron | 50.0% | |
| TCTCTCTGTACAGACCGCAA+AGG | + | chr4.4:41611975-41611994 | None:intergenic | 50.0% | |
| TCTGCAGCATAAGAATCGCG+AGG | + | chr4.4:41612862-41612881 | None:intergenic | 50.0% | |
| TCTGCGTCTTTGAACAGGAG+AGG | + | chr4.4:41610845-41610864 | None:intergenic | 50.0% | |
| TGAAAGGGCAGCTAGTCATC+TGG | - | chr4.4:41612605-41612624 | MS.gene021158:CDS | 50.0% | |
| TGCAATCCCCCATAATGCGA+AGG | - | chr4.4:41611238-41611257 | MS.gene021158:intron | 50.0% | |
| TGCCTCAGAGGGATTTCATG+TGG | + | chr4.4:41612223-41612242 | None:intergenic | 50.0% | |
| TGGTGTTCCTCAGCAGTTCT+TGG | - | chr4.4:41608953-41608972 | MS.gene021158:CDS | 50.0% | |
| TGTGGTGATACCCATGTTGC+AGG | - | chr4.4:41611907-41611926 | MS.gene021158:intron | 50.0% | |
| ! | ACATGGTCTTCTGGAAGCGA+AGG | - | chr4.4:41608462-41608481 | MS.gene021158:CDS | 50.0% |
| ! | AGATGACTAGCTGCCCTTTC+AGG | + | chr4.4:41612606-41612625 | None:intergenic | 50.0% |
| ! | CTCCTCCTTTTTCCTCCTCT+TGG | + | chr4.4:41613151-41613170 | None:intergenic | 50.0% |
| ! | GAGACATGGTGGAAGTGGTT+AGG | - | chr4.4:41609624-41609643 | MS.gene021158:CDS | 50.0% |
| ! | GATTTACTGGTTGCCCTTGC+AGG | + | chr4.4:41610366-41610385 | None:intergenic | 50.0% |
| ! | GGATTCAGGGCACTACATTC+AGG | - | chr4.4:41609397-41609416 | MS.gene021158:intron | 50.0% |
| ! | TCAGGGCACTACATTCAGGA+TGG | - | chr4.4:41609401-41609420 | MS.gene021158:intron | 50.0% |
| !! | AGGAGGAGAAGCATCGAAAG+CGG | - | chr4.4:41613187-41613206 | MS.gene021158:intron | 50.0% |
| !! | TGGTCTGTTGGCTTCTTTGG+GGG | + | chr4.4:41612283-41612302 | None:intergenic | 50.0% |
| !! | TGTTTGGGCAGAGAGCATCT+TGG | - | chr4.4:41610119-41610138 | MS.gene021158:CDS | 50.0% |
| ACAGGAAAGAGGCCAAGAGG+AGG | - | chr4.4:41613136-41613155 | MS.gene021158:intron | 55.0% | |
| ACTAACTACTGCAGGCAGGC+AGG | + | chr4.4:41612163-41612182 | None:intergenic | 55.0% | |
| AGAAGGAGACCTCTTAGGGG+AGG | + | chr4.4:41611349-41611368 | None:intergenic | 55.0% | |
| AGATCTCTGTTGCAGGGGTG+AGG | + | chr4.4:41611142-41611161 | None:intergenic | 55.0% | |
| ATAGTAGAACTCCACGGCGC+AGG | - | chr4.4:41611265-41611284 | MS.gene021158:intron | 55.0% | |
| CAGTAGTTTGAGGGCCAGTG+AGG | + | chr4.4:41609706-41609725 | None:intergenic | 55.0% | |
| CGATCTCCGTCTAACAGGAG+AGG | + | chr4.4:41610872-41610891 | None:intergenic | 55.0% | |
| CGTCGAATACCACTAAGCCG+TGG | - | chr4.4:41611195-41611214 | MS.gene021158:intron | 55.0% | |
| CGTTGTCGTACTGGAGAAGG+TGG | + | chr4.4:41610979-41610998 | None:intergenic | 55.0% | |
| CTACGTCGGTGCATTGGAGA+AGG | + | chr4.4:41611090-41611109 | None:intergenic | 55.0% | |
| CTGCGTTGTCGTACTGGAGA+AGG | + | chr4.4:41610982-41611001 | None:intergenic | 55.0% | |
| CTGCTCCTTCACTCGTCTCT+GGG | + | chr4.4:41612324-41612343 | None:intergenic | 55.0% | |
| GAACTGCTGAGGAACACCAC+TGG | + | chr4.4:41608952-41608971 | None:intergenic | 55.0% | |
| GACATCCCAGAGACGAGTGA+AGG | - | chr4.4:41612316-41612335 | MS.gene021158:intron | 55.0% | |
| GACGGCGAAAAAGGGAAGAG+CGG | - | chr4.4:41613217-41613236 | MS.gene021158:intron | 55.0% | |
| GAGGAAGCTGAACGAAGGGA+TGG | - | chr4.4:41613291-41613310 | MS.gene021158:intron | 55.0% | |
| GATCTCTGTTGCAGGGGTGA+GGG | + | chr4.4:41611141-41611160 | None:intergenic | 55.0% | |
| GATGCTCTCTGCCCAAACAC+TGG | + | chr4.4:41610118-41610137 | None:intergenic | 55.0% | |
| GCAGATCTCCAAAGGGTCGA+GGG | - | chr4.4:41610638-41610657 | MS.gene021158:CDS | 55.0% | |
| GGACGGAGGATTAGATGCGA+AGG | - | chr4.4:41609337-41609356 | MS.gene021158:intron | 55.0% | |
| GGAGATGGAGATACACGTGC+AGG | + | chr4.4:41611396-41611415 | None:intergenic | 55.0% | |
| GGATACAGCGGTCTTCACGA+CGG | - | chr4.4:41610680-41610699 | MS.gene021158:intron | 55.0% | |
| GGCCAAGAGGAGGAAAAAGG+AGG | - | chr4.4:41613146-41613165 | MS.gene021158:intron | 55.0% | |
| GGGAAGAGAGACGGCGAAAA+AGG | - | chr4.4:41613208-41613227 | MS.gene021158:intron | 55.0% | |
| GGTGATCTACGTCGGTGCAT+TGG | + | chr4.4:41611096-41611115 | None:intergenic | 55.0% | |
| GGTGATCTGCGTTGTCGTAC+TGG | + | chr4.4:41610988-41611007 | None:intergenic | 55.0% | |
| GTGATCTGCGTCGTCGTACT+GGG | + | chr4.4:41610927-41610946 | None:intergenic | 55.0% | |
| TCTGCTCCTTCACTCGTCTC+TGG | + | chr4.4:41612325-41612344 | None:intergenic | 55.0% | |
| TGACAGAGGCTCACCTGCAA+GGG | - | chr4.4:41610350-41610369 | MS.gene021158:CDS | 55.0% | |
| TGATCTGCGTCGTCGTACTG+GGG | + | chr4.4:41610926-41610945 | None:intergenic | 55.0% | |
| TGCAGATCTCCAAAGGGTCG+AGG | - | chr4.4:41610637-41610656 | MS.gene021158:CDS | 55.0% | |
| TTGACAGAGGCTCACCTGCA+AGG | - | chr4.4:41610349-41610368 | MS.gene021158:CDS | 55.0% | |
| ! | CCGGTGTCAACGTGTTAGTG+TGG | - | chr4.4:41608158-41608177 | MS.gene021158:CDS | 55.0% |
| ! | GGTATTCGACGCATCGGTGA+AGG | + | chr4.4:41611186-41611205 | None:intergenic | 55.0% |
| ! | GGTGTTCTGCGTCGACGAAA+TGG | + | chr4.4:41610823-41610842 | None:intergenic | 55.0% |
| ! | TGCACCGGAATTGGAGCATC+TGG | - | chr4.4:41607999-41608018 | MS.gene021158:CDS | 55.0% |
| !! | CACTCGTCTCTGGGATGTCA+TGG | + | chr4.4:41612315-41612334 | None:intergenic | 55.0% |
| !! | GGAGGAGAAGCATCGAAAGC+GGG | - | chr4.4:41613188-41613207 | MS.gene021158:intron | 55.0% |
| !! | GTCTCTGGGATGTCATGGCT+AGG | + | chr4.4:41612310-41612329 | None:intergenic | 55.0% |
| ATGGAACGCCCTCGACCCTT+TGG | + | chr4.4:41610649-41610668 | None:intergenic | 60.0% | |
| CTGCAAGTGCCTCCCCTAAG+AGG | - | chr4.4:41611337-41611356 | MS.gene021158:intron | 60.0% | |
| CTGCGTCGTCGTACTGGAGA+GGG | + | chr4.4:41610922-41610941 | None:intergenic | 60.0% | |
| CTGCGTCTCCGTGCAGGATA+AGG | + | chr4.4:41611009-41611028 | None:intergenic | 60.0% | |
| CTGCGTCTTCGCACAGGAGA+GGG | + | chr4.4:41611036-41611055 | None:intergenic | 60.0% | |
| CTTCGTCGTCGCACTGGAGA+GGG | + | chr4.4:41610895-41610914 | None:intergenic | 60.0% | |
| GAGAGCTTGACCTCCGTCCA+CGG | + | chr4.4:41611215-41611234 | None:intergenic | 60.0% | |
| GAGGGCGATCTCCGTCTAAC+AGG | + | chr4.4:41610877-41610896 | None:intergenic | 60.0% | |
| GATCTCCTAGTATGCGGCGC+AGG | - | chr4.4:41611157-41611176 | MS.gene021158:intron | 60.0% | |
| GGTGATCTGCGTCGTCGTAC+TGG | + | chr4.4:41610928-41610947 | None:intergenic | 60.0% | |
| GGTGATCTGCGTCTTCGCAC+AGG | + | chr4.4:41611042-41611061 | None:intergenic | 60.0% | |
| GGTGATCTTCGTCGTCGCAC+TGG | + | chr4.4:41610901-41610920 | None:intergenic | 60.0% | |
| TACCACTAAGCCGTGGACGG+AGG | - | chr4.4:41611202-41611221 | MS.gene021158:intron | 60.0% | |
| TCTGCGTCGTCGTACTGGAG+AGG | + | chr4.4:41610923-41610942 | None:intergenic | 60.0% | |
| TCTGCGTCTTCGCACAGGAG+AGG | + | chr4.4:41611037-41611056 | None:intergenic | 60.0% | |
| TCTTCGTCGTCGCACTGGAG+AGG | + | chr4.4:41610896-41610915 | None:intergenic | 60.0% | |
| CGTCGTCGTACTGGGGAAGG+TGG | + | chr4.4:41610949-41610968 | None:intergenic | 65.0% | |
| CTGCGTCGTCGTACTGGGGA+AGG | + | chr4.4:41610952-41610971 | None:intergenic | 65.0% | |
| GACCTCCGTCCACGGCTTAG+TGG | + | chr4.4:41611207-41611226 | None:intergenic | 65.0% | |
| GGAGATCTGCGTCTCCGTGC+AGG | + | chr4.4:41611015-41611034 | None:intergenic | 65.0% | |
| GGTGACCTGCGCCGCATACT+AGG | + | chr4.4:41611165-41611184 | None:intergenic | 65.0% | |
| GGAGATGGAGACCTGCGCCG+TGG | + | chr4.4:41611279-41611298 | None:intergenic | 70.0% | |
| GGCAAGGGAGGCGAGTCTCC+TGG | - | chr4.4:41612790-41612809 | MS.gene021158:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 41607600 | 41613419 | 41607600 | ID=MS.gene021158 |
| chr4.4 | mRNA | 41607600 | 41613419 | 41607600 | ID=MS.gene021158.t1;Parent=MS.gene021158 |
| chr4.4 | exon | 41613399 | 41613419 | 41613399 | ID=MS.gene021158.t1.exon1;Parent=MS.gene021158.t1 |
| chr4.4 | CDS | 41613399 | 41613419 | 41613399 | ID=cds.MS.gene021158.t1;Parent=MS.gene021158.t1 |
| chr4.4 | exon | 41612999 | 41613088 | 41612999 | ID=MS.gene021158.t1.exon2;Parent=MS.gene021158.t1 |
| chr4.4 | CDS | 41612999 | 41613088 | 41612999 | ID=cds.MS.gene021158.t1;Parent=MS.gene021158.t1 |
| chr4.4 | exon | 41612536 | 41612658 | 41612536 | ID=MS.gene021158.t1.exon3;Parent=MS.gene021158.t1 |
| chr4.4 | CDS | 41612536 | 41612658 | 41612536 | ID=cds.MS.gene021158.t1;Parent=MS.gene021158.t1 |
| chr4.4 | exon | 41612012 | 41612179 | 41612012 | ID=MS.gene021158.t1.exon4;Parent=MS.gene021158.t1 |
| chr4.4 | CDS | 41612012 | 41612179 | 41612012 | ID=cds.MS.gene021158.t1;Parent=MS.gene021158.t1 |
| chr4.4 | exon | 41611819 | 41611905 | 41611819 | ID=MS.gene021158.t1.exon5;Parent=MS.gene021158.t1 |
| chr4.4 | CDS | 41611819 | 41611905 | 41611819 | ID=cds.MS.gene021158.t1;Parent=MS.gene021158.t1 |
| chr4.4 | exon | 41611557 | 41611681 | 41611557 | ID=MS.gene021158.t1.exon6;Parent=MS.gene021158.t1 |
| chr4.4 | CDS | 41611557 | 41611681 | 41611557 | ID=cds.MS.gene021158.t1;Parent=MS.gene021158.t1 |
| chr4.4 | exon | 41610750 | 41610797 | 41610750 | ID=MS.gene021158.t1.exon7;Parent=MS.gene021158.t1 |
| chr4.4 | CDS | 41610750 | 41610797 | 41610750 | ID=cds.MS.gene021158.t1;Parent=MS.gene021158.t1 |
| chr4.4 | exon | 41610607 | 41610663 | 41610607 | ID=MS.gene021158.t1.exon8;Parent=MS.gene021158.t1 |
| chr4.4 | CDS | 41610607 | 41610663 | 41610607 | ID=cds.MS.gene021158.t1;Parent=MS.gene021158.t1 |
| chr4.4 | exon | 41609538 | 41610377 | 41609538 | ID=MS.gene021158.t1.exon9;Parent=MS.gene021158.t1 |
| chr4.4 | CDS | 41609538 | 41610377 | 41609538 | ID=cds.MS.gene021158.t1;Parent=MS.gene021158.t1 |
| chr4.4 | exon | 41608908 | 41609090 | 41608908 | ID=MS.gene021158.t1.exon10;Parent=MS.gene021158.t1 |
| chr4.4 | CDS | 41608908 | 41609090 | 41608908 | ID=cds.MS.gene021158.t1;Parent=MS.gene021158.t1 |
| chr4.4 | exon | 41608657 | 41608800 | 41608657 | ID=MS.gene021158.t1.exon11;Parent=MS.gene021158.t1 |
| chr4.4 | CDS | 41608657 | 41608800 | 41608657 | ID=cds.MS.gene021158.t1;Parent=MS.gene021158.t1 |
| chr4.4 | exon | 41608331 | 41608525 | 41608331 | ID=MS.gene021158.t1.exon12;Parent=MS.gene021158.t1 |
| chr4.4 | CDS | 41608331 | 41608525 | 41608331 | ID=cds.MS.gene021158.t1;Parent=MS.gene021158.t1 |
| chr4.4 | exon | 41607600 | 41608242 | 41607600 | ID=MS.gene021158.t1.exon13;Parent=MS.gene021158.t1 |
| chr4.4 | CDS | 41607600 | 41608242 | 41607600 | ID=cds.MS.gene021158.t1;Parent=MS.gene021158.t1 |
| Gene Sequence |
| Protein sequence |
