Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013209.t1 | XP_003602734.1 | 97.7 | 483 | 11 | 0 | 1 | 483 | 1 | 483 | 3.10E-277 | 963.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013209.t1 | Q9FI43 | 71.3 | 477 | 130 | 3 | 9 | 483 | 16 | 487 | 1.1e-198 | 694.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013209.t1 | G7J2S0 | 97.7 | 483 | 11 | 0 | 1 | 483 | 1 | 483 | 2.2e-277 | 963.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene013209 | MS.gene58411 | PPI |
MS.gene013209 | MS.gene030630 | PPI |
MS.gene013209 | MS.gene89324 | PPI |
MS.gene013209 | MS.gene055205 | PPI |
MS.gene013209 | MS.gene033106 | PPI |
MS.gene013810 | MS.gene013209 | PPI |
MS.gene013209 | MS.gene46108 | PPI |
MS.gene045060 | MS.gene013209 | PPI |
MS.gene013209 | MS.gene91577 | PPI |
MS.gene013209 | MS.gene89800 | PPI |
MS.gene013209 | MS.gene28396 | PPI |
MS.gene013209 | MS.gene044401 | PPI |
MS.gene013209 | MS.gene57378 | PPI |
MS.gene013209 | MS.gene57380 | PPI |
MS.gene013209 | MS.gene75421 | PPI |
MS.gene013209 | MS.gene061737 | PPI |
MS.gene013209 | MS.gene70227 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013209.t1 | MTR_3g098460 | 97.723 | 483 | 11 | 0 | 1 | 483 | 1 | 483 | 0.0 | 986 |
MS.gene013209.t1 | MTR_8g096050 | 79.455 | 477 | 98 | 0 | 7 | 483 | 29 | 505 | 0.0 | 803 |
MS.gene013209.t1 | MTR_7g084400 | 68.323 | 483 | 140 | 3 | 9 | 483 | 11 | 488 | 0.0 | 697 |
MS.gene013209.t1 | MTR_7g084400 | 64.039 | 406 | 143 | 2 | 9 | 412 | 11 | 415 | 0.0 | 548 |
MS.gene013209.t1 | MTR_7g084400 | 29.949 | 197 | 123 | 4 | 288 | 478 | 196 | 383 | 6.75e-20 | 92.0 |
MS.gene013209.t1 | MTR_8g027975 | 40.777 | 309 | 154 | 8 | 203 | 483 | 49 | 356 | 1.88e-67 | 221 |
MS.gene013209.t1 | MTR_5g009500 | 42.020 | 307 | 151 | 8 | 203 | 483 | 36 | 341 | 6.86e-66 | 216 |
MS.gene013209.t1 | MTR_3g107510 | 36.594 | 276 | 171 | 3 | 205 | 480 | 122 | 393 | 5.39e-53 | 184 |
MS.gene013209.t1 | MTR_3g107510 | 32.609 | 184 | 110 | 5 | 298 | 478 | 121 | 293 | 2.52e-23 | 102 |
MS.gene013209.t1 | MTR_1g012030 | 36.331 | 278 | 173 | 2 | 203 | 480 | 137 | 410 | 3.65e-52 | 182 |
MS.gene013209.t1 | MTR_1g012030 | 30.939 | 181 | 122 | 3 | 202 | 380 | 230 | 409 | 1.95e-17 | 84.7 |
MS.gene013209.t1 | MTR_4g114320 | 36.201 | 279 | 172 | 4 | 203 | 480 | 121 | 394 | 9.24e-50 | 175 |
MS.gene013209.t1 | MTR_6g091800 | 32.432 | 296 | 178 | 6 | 202 | 480 | 16 | 306 | 2.60e-45 | 161 |
MS.gene013209.t1 | MTR_7g064980 | 30.696 | 316 | 192 | 8 | 186 | 481 | 7 | 315 | 3.07e-45 | 161 |
MS.gene013209.t1 | MTR_7g064980 | 29.130 | 230 | 143 | 7 | 165 | 384 | 98 | 317 | 6.53e-22 | 96.7 |
MS.gene013209.t1 | MTR_3g104600 | 30.945 | 307 | 177 | 7 | 203 | 482 | 33 | 331 | 3.39e-44 | 159 |
MS.gene013209.t1 | MTR_3g104600 | 27.184 | 206 | 122 | 5 | 299 | 483 | 35 | 233 | 9.40e-16 | 79.0 |
MS.gene013209.t1 | MTR_6g091800 | 30.312 | 320 | 177 | 7 | 202 | 480 | 16 | 330 | 5.06e-43 | 155 |
MS.gene013209.t1 | MTR_2g436930 | 31.475 | 305 | 169 | 6 | 207 | 474 | 17 | 318 | 2.43e-41 | 150 |
MS.gene013209.t1 | MTR_2g436930 | 29.381 | 194 | 118 | 4 | 301 | 478 | 17 | 207 | 9.36e-20 | 90.5 |
MS.gene013209.t1 | MTR_5g081150 | 33.788 | 293 | 172 | 9 | 205 | 480 | 34 | 321 | 3.92e-41 | 150 |
MS.gene013209.t1 | MTR_5g081150 | 29.958 | 237 | 141 | 7 | 157 | 378 | 92 | 318 | 6.77e-19 | 88.2 |
MS.gene013209.t1 | MTR_5g081150 | 32.663 | 199 | 115 | 5 | 292 | 477 | 27 | 219 | 1.30e-14 | 75.1 |
MS.gene013209.t1 | MTR_7g068340 | 31.502 | 273 | 161 | 7 | 216 | 478 | 98 | 354 | 3.22e-38 | 143 |
MS.gene013209.t1 | MTR_7g068340 | 29.545 | 176 | 111 | 4 | 310 | 480 | 98 | 265 | 2.76e-17 | 84.0 |
MS.gene013209.t1 | MTR_7g068340 | 24.713 | 174 | 124 | 2 | 207 | 380 | 189 | 355 | 3.85e-14 | 74.3 |
MS.gene013209.t1 | MTR_4g119770 | 28.662 | 314 | 182 | 6 | 207 | 481 | 16 | 326 | 2.31e-37 | 140 |
MS.gene013209.t1 | MTR_4g119770 | 23.671 | 207 | 130 | 6 | 198 | 379 | 120 | 323 | 2.09e-11 | 65.5 |
MS.gene013209.t1 | MTR_6g091800 | 29.139 | 302 | 168 | 7 | 202 | 462 | 16 | 312 | 3.00e-36 | 136 |
MS.gene013209.t1 | MTR_7g109135 | 30.928 | 291 | 176 | 7 | 207 | 480 | 24 | 306 | 5.80e-36 | 135 |
MS.gene013209.t1 | MTR_1g087840 | 31.673 | 281 | 167 | 6 | 217 | 480 | 31 | 303 | 3.13e-34 | 131 |
MS.gene013209.t1 | MTR_6g091800 | 29.252 | 294 | 149 | 6 | 202 | 480 | 16 | 265 | 3.93e-34 | 129 |
MS.gene013209.t1 | MTR_6g034145 | 29.921 | 254 | 159 | 4 | 241 | 480 | 4 | 252 | 6.74e-34 | 129 |
MS.gene013209.t1 | MTR_6g034145 | 25.510 | 196 | 119 | 5 | 205 | 379 | 61 | 250 | 4.63e-13 | 69.7 |
MS.gene013209.t1 | MTR_6g091800 | 32.203 | 236 | 140 | 5 | 202 | 422 | 16 | 246 | 1.40e-33 | 128 |
MS.gene013209.t1 | MTR_6g091800 | 33.500 | 200 | 112 | 4 | 296 | 480 | 16 | 209 | 9.21e-26 | 106 |
MS.gene013209.t1 | MTR_3g074490 | 31.908 | 304 | 179 | 8 | 200 | 483 | 111 | 406 | 2.79e-32 | 127 |
MS.gene013209.t1 | MTR_6g092210 | 29.032 | 248 | 163 | 4 | 241 | 480 | 4 | 246 | 3.99e-32 | 124 |
MS.gene013209.t1 | MTR_6g092210 | 25.789 | 190 | 120 | 5 | 205 | 379 | 61 | 244 | 2.67e-12 | 67.4 |
MS.gene013209.t1 | MTR_6g091800 | 27.358 | 318 | 148 | 7 | 202 | 480 | 16 | 289 | 4.18e-32 | 125 |
MS.gene013209.t1 | MTR_8g090210 | 31.013 | 316 | 184 | 9 | 193 | 483 | 94 | 400 | 4.21e-32 | 127 |
MS.gene013209.t1 | MTR_6g091800 | 29.615 | 260 | 139 | 6 | 202 | 422 | 16 | 270 | 1.65e-31 | 123 |
MS.gene013209.t1 | MTR_6g091800 | 30.804 | 224 | 110 | 5 | 296 | 480 | 16 | 233 | 9.02e-23 | 98.6 |
MS.gene013209.t1 | MTR_4g016730 | 29.316 | 307 | 175 | 8 | 185 | 478 | 76 | 353 | 1.06e-30 | 122 |
MS.gene013209.t1 | MTR_7g109135 | 29.553 | 291 | 173 | 8 | 207 | 480 | 24 | 299 | 2.56e-30 | 120 |
MS.gene013209.t1 | MTR_3g104500 | 26.367 | 311 | 193 | 8 | 196 | 482 | 25 | 323 | 1.06e-29 | 119 |
MS.gene013209.t1 | MTR_7g109135 | 31.915 | 235 | 143 | 6 | 255 | 480 | 2 | 228 | 1.57e-29 | 116 |
MS.gene013209.t1 | MTR_4g005330 | 28.571 | 301 | 183 | 8 | 205 | 483 | 66 | 356 | 2.40e-29 | 118 |
MS.gene013209.t1 | MTR_5g055410 | 32.734 | 278 | 168 | 10 | 217 | 480 | 33 | 305 | 4.59e-29 | 117 |
MS.gene013209.t1 | MTR_4g005330 | 28.333 | 300 | 183 | 8 | 206 | 483 | 1 | 290 | 1.88e-28 | 114 |
MS.gene013209.t1 | MTR_2g436930 | 29.825 | 228 | 141 | 4 | 265 | 474 | 2 | 228 | 2.53e-27 | 110 |
MS.gene013209.t1 | MTR_2g436930 | 24.638 | 207 | 128 | 7 | 198 | 379 | 29 | 232 | 8.13e-12 | 65.5 |
MS.gene013209.t1 | MTR_7g109135 | 35.057 | 174 | 99 | 4 | 315 | 480 | 40 | 207 | 1.26e-26 | 107 |
MS.gene013209.t1 | MTR_4g012850 | 26.389 | 288 | 201 | 6 | 192 | 474 | 5 | 286 | 2.07e-26 | 109 |
MS.gene013209.t1 | MTR_3g025800 | 28.221 | 326 | 191 | 9 | 192 | 481 | 14 | 332 | 3.70e-26 | 109 |
MS.gene013209.t1 | MTR_6g091910 | 30.808 | 198 | 119 | 4 | 296 | 480 | 16 | 208 | 9.99e-26 | 105 |
MS.gene013209.t1 | MTR_6g091910 | 27.179 | 195 | 121 | 4 | 202 | 379 | 16 | 206 | 6.61e-18 | 82.8 |
MS.gene013209.t1 | MTR_1g095780 | 21.286 | 451 | 326 | 10 | 35 | 481 | 360 | 785 | 5.96e-25 | 108 |
MS.gene013209.t1 | MTR_8g076760 | 29.537 | 281 | 176 | 7 | 221 | 482 | 30 | 307 | 3.44e-24 | 103 |
MS.gene013209.t1 | MTR_8g076760 | 27.326 | 172 | 118 | 4 | 313 | 480 | 28 | 196 | 4.62e-16 | 79.3 |
MS.gene013209.t1 | MTR_8g107270 | 26.596 | 282 | 187 | 6 | 203 | 468 | 16 | 293 | 4.04e-24 | 102 |
MS.gene013209.t1 | MTR_4g119770 | 27.823 | 248 | 146 | 5 | 207 | 424 | 16 | 260 | 1.11e-23 | 100 |
MS.gene013209.t1 | MTR_4g119770 | 29.082 | 196 | 118 | 4 | 301 | 478 | 16 | 208 | 1.04e-20 | 92.0 |
MS.gene013209.t1 | MTR_5g081150 | 32.273 | 220 | 129 | 7 | 205 | 409 | 34 | 248 | 1.33e-22 | 97.4 |
MS.gene013209.t1 | MTR_5g081150 | 32.500 | 200 | 116 | 5 | 292 | 478 | 27 | 220 | 3.94e-15 | 75.9 |
MS.gene013209.t1 | MTR_5g081150 | 32.273 | 220 | 129 | 7 | 205 | 409 | 34 | 248 | 1.72e-22 | 96.7 |
MS.gene013209.t1 | MTR_5g081150 | 32.500 | 200 | 116 | 5 | 292 | 478 | 27 | 220 | 3.40e-15 | 75.9 |
MS.gene013209.t1 | MTR_5g073040 | 27.972 | 286 | 184 | 8 | 203 | 477 | 37 | 311 | 4.12e-22 | 97.4 |
MS.gene013209.t1 | MTR_5g073040 | 28.962 | 183 | 122 | 2 | 299 | 481 | 39 | 213 | 1.32e-19 | 90.1 |
MS.gene013209.t1 | MTR_6g091800 | 33.714 | 175 | 95 | 4 | 296 | 455 | 16 | 184 | 4.03e-20 | 88.6 |
MS.gene013209.t1 | MTR_6g091800 | 38.400 | 125 | 73 | 3 | 202 | 323 | 16 | 139 | 3.42e-19 | 85.9 |
MS.gene013209.t1 | MTR_2g102010 | 26.481 | 287 | 203 | 4 | 200 | 481 | 12 | 295 | 8.47e-20 | 90.1 |
MS.gene013209.t1 | MTR_8g098240 | 26.027 | 292 | 190 | 8 | 201 | 483 | 316 | 590 | 2.37e-19 | 91.7 |
MS.gene013209.t1 | MTR_3g028590 | 27.907 | 301 | 184 | 10 | 192 | 468 | 77 | 368 | 3.35e-19 | 89.7 |
MS.gene013209.t1 | MTR_3g028590 | 27.907 | 301 | 184 | 10 | 192 | 468 | 81 | 372 | 3.70e-19 | 89.7 |
MS.gene013209.t1 | MTR_6g091800 | 38.400 | 125 | 73 | 3 | 202 | 323 | 16 | 139 | 5.21e-19 | 85.9 |
MS.gene013209.t1 | MTR_6g091800 | 30.653 | 199 | 93 | 5 | 296 | 455 | 16 | 208 | 3.57e-17 | 80.5 |
MS.gene013209.t1 | MTR_5g030530 | 27.815 | 302 | 185 | 10 | 202 | 480 | 5 | 296 | 1.76e-18 | 86.3 |
MS.gene013209.t1 | MTR_1g097890 | 26.259 | 278 | 177 | 7 | 206 | 480 | 52 | 304 | 1.88e-18 | 86.7 |
MS.gene013209.t1 | MTR_8g066975 | 26.797 | 306 | 183 | 7 | 202 | 480 | 5 | 296 | 1.95e-18 | 86.3 |
MS.gene013209.t1 | MTR_5g081910 | 26.792 | 265 | 158 | 9 | 245 | 476 | 54 | 315 | 1.03e-17 | 84.7 |
MS.gene013209.t1 | MTR_5g081910 | 29.858 | 211 | 119 | 8 | 292 | 476 | 34 | 241 | 1.31e-17 | 83.2 |
MS.gene013209.t1 | MTR_8g036880 | 26.690 | 281 | 185 | 6 | 205 | 468 | 102 | 378 | 1.45e-17 | 85.1 |
MS.gene013209.t1 | MTR_8g092080 | 26.619 | 278 | 176 | 6 | 206 | 480 | 53 | 305 | 4.14e-17 | 82.8 |
MS.gene013209.t1 | MTR_8g092080 | 30.556 | 180 | 100 | 6 | 299 | 477 | 52 | 207 | 1.92e-14 | 74.7 |
MS.gene013209.t1 | MTR_4g057850 | 24.742 | 291 | 185 | 10 | 206 | 476 | 23 | 299 | 4.96e-17 | 82.4 |
MS.gene013209.t1 | MTR_1g090330 | 28.090 | 178 | 118 | 4 | 288 | 459 | 4 | 177 | 2.32e-16 | 80.1 |
MS.gene013209.t1 | MTR_1g090330 | 23.404 | 282 | 198 | 7 | 210 | 478 | 19 | 295 | 4.26e-16 | 79.3 |
MS.gene013209.t1 | MTR_1g088995 | 25.874 | 286 | 199 | 6 | 204 | 483 | 32 | 310 | 2.67e-16 | 80.1 |
MS.gene013209.t1 | MTR_4g078545 | 28.470 | 281 | 179 | 9 | 205 | 468 | 75 | 350 | 2.88e-16 | 80.9 |
MS.gene013209.t1 | MTR_1g036280 | 27.113 | 284 | 148 | 12 | 253 | 482 | 79 | 357 | 3.56e-16 | 80.5 |
MS.gene013209.t1 | MTR_6g015860 | 24.918 | 305 | 207 | 7 | 192 | 478 | 4 | 304 | 5.32e-16 | 79.3 |
MS.gene013209.t1 | MTR_6g015860 | 24.599 | 187 | 133 | 5 | 299 | 480 | 18 | 201 | 3.04e-11 | 65.1 |
MS.gene013209.t1 | MTR_4g018750 | 26.190 | 294 | 184 | 9 | 205 | 478 | 15 | 295 | 8.20e-16 | 78.6 |
MS.gene013209.t1 | MTR_2g098070 | 28.470 | 281 | 179 | 9 | 205 | 468 | 66 | 341 | 2.35e-15 | 77.8 |
MS.gene013209.t1 | MTR_6g034515 | 24.436 | 266 | 182 | 6 | 221 | 477 | 83 | 338 | 5.13e-15 | 77.0 |
MS.gene013209.t1 | MTR_3g100570 | 24.684 | 316 | 191 | 7 | 203 | 480 | 4 | 310 | 7.69e-15 | 75.9 |
MS.gene013209.t1 | MTR_7g015870 | 25.000 | 308 | 187 | 9 | 200 | 478 | 20 | 312 | 1.48e-14 | 75.1 |
MS.gene013209.t1 | MTR_7g015870 | 28.500 | 200 | 115 | 6 | 206 | 383 | 123 | 316 | 1.02e-11 | 66.2 |
MS.gene013209.t1 | MTR_7g015870 | 25.000 | 308 | 187 | 9 | 200 | 478 | 16 | 308 | 5.92e-14 | 73.2 |
MS.gene013209.t1 | MTR_7g066690 | 24.832 | 298 | 183 | 8 | 205 | 478 | 17 | 297 | 1.29e-13 | 72.0 |
MS.gene013209.t1 | MTR_8g099910 | 26.984 | 252 | 160 | 8 | 207 | 441 | 74 | 318 | 1.33e-13 | 72.4 |
MS.gene013209.t1 | MTR_3g462140 | 25.753 | 299 | 194 | 7 | 198 | 478 | 8 | 296 | 1.73e-13 | 71.6 |
MS.gene013209.t1 | MTR_1g088995 | 26.923 | 156 | 107 | 3 | 303 | 457 | 37 | 186 | 2.16e-13 | 70.1 |
MS.gene013209.t1 | MTR_6g033280 | 26.230 | 244 | 159 | 7 | 206 | 435 | 64 | 300 | 8.33e-13 | 70.1 |
MS.gene013209.t1 | MTR_4g088545 | 27.368 | 190 | 125 | 4 | 300 | 480 | 13 | 198 | 9.35e-13 | 68.2 |
MS.gene013209.t1 | MTR_8g086070 | 22.887 | 284 | 203 | 7 | 203 | 478 | 19 | 294 | 1.39e-12 | 68.9 |
MS.gene013209.t1 | MTR_4g132070 | 29.655 | 145 | 95 | 3 | 19 | 157 | 381 | 524 | 1.50e-12 | 70.1 |
MS.gene013209.t1 | MTR_7g083790 | 29.289 | 239 | 149 | 9 | 207 | 431 | 83 | 315 | 1.57e-12 | 69.3 |
MS.gene013209.t1 | MTR_3g104810 | 23.810 | 336 | 211 | 9 | 184 | 478 | 10 | 341 | 2.32e-12 | 68.6 |
MS.gene013209.t1 | MTR_3g104810 | 33.333 | 156 | 83 | 5 | 249 | 383 | 190 | 345 | 6.68e-12 | 67.4 |
MS.gene013209.t1 | MTR_1g026190 | 30.822 | 146 | 92 | 4 | 19 | 157 | 372 | 515 | 2.76e-12 | 69.3 |
MS.gene013209.t1 | MTR_8g086070 | 30.723 | 166 | 103 | 5 | 302 | 463 | 24 | 181 | 2.87e-12 | 66.2 |
MS.gene013209.t1 | MTR_4g088545 | 27.368 | 190 | 125 | 4 | 300 | 480 | 13 | 198 | 3.33e-12 | 67.4 |
MS.gene013209.t1 | MTR_4g088545 | 27.368 | 190 | 125 | 4 | 300 | 480 | 13 | 198 | 4.16e-12 | 67.4 |
MS.gene013209.t1 | MTR_2g032610 | 23.891 | 293 | 202 | 10 | 200 | 474 | 24 | 313 | 5.88e-12 | 67.0 |
MS.gene013209.t1 | MTR_5g092810 | 30.556 | 144 | 93 | 3 | 20 | 157 | 383 | 525 | 6.16e-12 | 68.2 |
MS.gene013209.t1 | MTR_4g094578 | 22.535 | 284 | 197 | 9 | 205 | 477 | 29 | 300 | 1.04e-11 | 66.2 |
MS.gene013209.t1 | MTR_5g009830 | 30.556 | 144 | 93 | 4 | 20 | 157 | 357 | 499 | 1.29e-11 | 67.0 |
MS.gene013209.t1 | MTR_7g117030 | 22.619 | 252 | 175 | 7 | 247 | 481 | 88 | 336 | 3.95e-11 | 64.7 |
MS.gene013209.t1 | MTR_1g046950 | 27.206 | 136 | 91 | 1 | 34 | 161 | 5 | 140 | 8.85e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene013209.t1 | AT5G51050 | 71.279 | 477 | 130 | 3 | 9 | 483 | 27 | 498 | 0.0 | 710 |
MS.gene013209.t1 | AT5G07320 | 70.737 | 475 | 131 | 2 | 9 | 483 | 13 | 479 | 0.0 | 704 |
MS.gene013209.t1 | AT5G61810 | 67.647 | 476 | 144 | 4 | 9 | 483 | 12 | 478 | 0.0 | 672 |
MS.gene013209.t1 | AT5G61810 | 69.767 | 344 | 94 | 4 | 141 | 483 | 1 | 335 | 1.36e-175 | 496 |
MS.gene013209.t1 | AT4G01100 | 40.952 | 315 | 145 | 8 | 203 | 483 | 40 | 347 | 4.06e-70 | 227 |
MS.gene013209.t1 | AT4G01100 | 39.877 | 326 | 147 | 8 | 203 | 483 | 40 | 361 | 1.39e-68 | 224 |
MS.gene013209.t1 | AT4G01100 | 40.594 | 303 | 139 | 8 | 215 | 483 | 2 | 297 | 5.61e-66 | 215 |
MS.gene013209.t1 | AT4G01100 | 26.857 | 175 | 123 | 1 | 308 | 477 | 1 | 175 | 1.91e-19 | 89.4 |
MS.gene013209.t1 | AT4G01100 | 27.919 | 197 | 119 | 4 | 207 | 380 | 97 | 293 | 3.53e-16 | 79.7 |
MS.gene013209.t1 | AT4G32400 | 37.413 | 286 | 172 | 5 | 197 | 480 | 105 | 385 | 5.20e-54 | 186 |
MS.gene013209.t1 | AT3G53940 | 34.114 | 299 | 179 | 7 | 198 | 481 | 66 | 361 | 4.83e-48 | 169 |
MS.gene013209.t1 | AT3G55640 | 33.444 | 302 | 183 | 7 | 191 | 477 | 24 | 322 | 1.41e-46 | 165 |
MS.gene013209.t1 | AT3G55640 | 33.444 | 302 | 183 | 7 | 191 | 477 | 24 | 322 | 1.41e-46 | 165 |
MS.gene013209.t1 | AT2G37890 | 31.429 | 315 | 186 | 8 | 188 | 480 | 26 | 332 | 1.80e-43 | 157 |
MS.gene013209.t1 | AT2G37890 | 30.603 | 232 | 150 | 5 | 157 | 380 | 103 | 331 | 3.22e-26 | 109 |
MS.gene013209.t1 | AT4G26180 | 30.435 | 299 | 185 | 6 | 202 | 482 | 18 | 311 | 3.02e-43 | 156 |
MS.gene013209.t1 | AT4G26180 | 35.149 | 202 | 112 | 4 | 296 | 483 | 18 | 214 | 7.05e-29 | 116 |
MS.gene013209.t1 | AT1G14560 | 31.010 | 287 | 166 | 8 | 216 | 477 | 38 | 317 | 3.59e-40 | 147 |
MS.gene013209.t1 | AT1G14560 | 29.474 | 190 | 113 | 4 | 310 | 483 | 38 | 222 | 9.24e-20 | 90.5 |
MS.gene013209.t1 | AT4G26180 | 29.749 | 279 | 173 | 6 | 202 | 462 | 18 | 291 | 1.76e-37 | 139 |
MS.gene013209.t1 | AT4G26180 | 35.149 | 202 | 112 | 4 | 296 | 483 | 18 | 214 | 3.26e-29 | 116 |
MS.gene013209.t1 | AT5G01500 | 31.502 | 273 | 161 | 9 | 216 | 478 | 130 | 386 | 3.08e-36 | 139 |
MS.gene013209.t1 | AT5G01500 | 30.114 | 176 | 110 | 4 | 310 | 480 | 130 | 297 | 8.63e-17 | 82.8 |
MS.gene013209.t1 | AT5G01500 | 27.586 | 174 | 119 | 2 | 207 | 380 | 221 | 387 | 5.10e-12 | 68.2 |
MS.gene013209.t1 | AT3G21390 | 29.545 | 308 | 173 | 6 | 207 | 474 | 21 | 324 | 5.73e-36 | 136 |
MS.gene013209.t1 | AT3G21390 | 30.729 | 192 | 116 | 5 | 301 | 478 | 21 | 209 | 3.29e-20 | 92.0 |
MS.gene013209.t1 | AT3G21390 | 29.545 | 308 | 173 | 6 | 207 | 474 | 43 | 346 | 6.46e-36 | 137 |
MS.gene013209.t1 | AT3G21390 | 30.729 | 192 | 116 | 5 | 301 | 478 | 43 | 231 | 4.10e-20 | 92.0 |
MS.gene013209.t1 | AT5G64970 | 31.975 | 319 | 177 | 9 | 191 | 483 | 121 | 425 | 6.17e-35 | 135 |
MS.gene013209.t1 | AT3G51870 | 29.044 | 272 | 169 | 7 | 216 | 478 | 102 | 358 | 9.83e-35 | 134 |
MS.gene013209.t1 | AT3G51870 | 27.807 | 187 | 125 | 3 | 207 | 390 | 193 | 372 | 7.95e-15 | 76.6 |
MS.gene013209.t1 | AT3G51870 | 27.933 | 179 | 116 | 4 | 310 | 483 | 102 | 272 | 3.58e-14 | 74.3 |
MS.gene013209.t1 | AT5G48970 | 28.710 | 310 | 174 | 8 | 207 | 474 | 24 | 328 | 5.66e-34 | 131 |
MS.gene013209.t1 | AT5G48970 | 30.612 | 196 | 113 | 6 | 301 | 478 | 24 | 214 | 6.45e-20 | 91.3 |
MS.gene013209.t1 | AT5G48970 | 22.967 | 209 | 132 | 5 | 198 | 379 | 126 | 332 | 1.56e-11 | 66.2 |
MS.gene013209.t1 | AT1G14560 | 29.779 | 272 | 159 | 8 | 216 | 462 | 38 | 302 | 7.38e-34 | 130 |
MS.gene013209.t1 | AT1G14560 | 29.474 | 190 | 113 | 4 | 310 | 483 | 38 | 222 | 4.80e-20 | 91.3 |
MS.gene013209.t1 | AT5G64970 | 31.908 | 304 | 167 | 9 | 206 | 483 | 12 | 301 | 2.02e-32 | 125 |
MS.gene013209.t1 | AT1G78180 | 31.683 | 303 | 181 | 6 | 200 | 483 | 123 | 418 | 2.02e-30 | 122 |
MS.gene013209.t1 | AT3G55640 | 31.897 | 232 | 142 | 5 | 191 | 409 | 24 | 252 | 2.14e-29 | 116 |
MS.gene013209.t1 | AT3G55640 | 28.571 | 203 | 130 | 4 | 287 | 478 | 26 | 224 | 7.53e-19 | 86.7 |
MS.gene013209.t1 | AT3G55640 | 31.897 | 232 | 142 | 5 | 191 | 409 | 24 | 252 | 2.14e-29 | 116 |
MS.gene013209.t1 | AT3G55640 | 28.571 | 203 | 130 | 4 | 287 | 478 | 26 | 224 | 7.53e-19 | 86.7 |
MS.gene013209.t1 | AT3G53940 | 33.333 | 225 | 134 | 5 | 198 | 409 | 66 | 287 | 7.80e-29 | 115 |
MS.gene013209.t1 | AT3G53940 | 32.367 | 207 | 126 | 5 | 280 | 477 | 57 | 258 | 2.81e-21 | 94.4 |
MS.gene013209.t1 | AT3G20240 | 27.213 | 305 | 190 | 8 | 198 | 480 | 45 | 339 | 1.93e-28 | 115 |
MS.gene013209.t1 | AT5G48970 | 28.295 | 258 | 163 | 5 | 238 | 474 | 1 | 257 | 2.19e-28 | 114 |
MS.gene013209.t1 | AT5G48970 | 31.944 | 144 | 88 | 3 | 340 | 478 | 5 | 143 | 6.02e-16 | 78.2 |
MS.gene013209.t1 | AT5G48970 | 22.967 | 209 | 132 | 5 | 198 | 379 | 55 | 261 | 2.37e-12 | 67.8 |
MS.gene013209.t1 | AT2G47490 | 30.072 | 276 | 177 | 5 | 217 | 480 | 29 | 300 | 2.95e-28 | 114 |
MS.gene013209.t1 | AT1G74240 | 28.852 | 305 | 184 | 6 | 205 | 480 | 36 | 336 | 4.23e-28 | 115 |
MS.gene013209.t1 | AT1G74240 | 29.126 | 206 | 119 | 4 | 299 | 481 | 36 | 237 | 9.28e-20 | 91.3 |
MS.gene013209.t1 | AT1G14560 | 32.663 | 199 | 110 | 5 | 299 | 477 | 25 | 219 | 5.01e-28 | 112 |
MS.gene013209.t1 | AT1G14560 | 27.500 | 200 | 116 | 5 | 205 | 379 | 25 | 220 | 1.17e-14 | 73.9 |
MS.gene013209.t1 | AT1G14560 | 27.273 | 121 | 72 | 2 | 379 | 483 | 4 | 124 | 3.08e-11 | 63.9 |
MS.gene013209.t1 | AT5G66380 | 30.241 | 291 | 184 | 7 | 207 | 480 | 12 | 300 | 6.39e-28 | 113 |
MS.gene013209.t1 | AT5G66380 | 28.571 | 189 | 119 | 4 | 211 | 384 | 116 | 303 | 4.28e-11 | 64.3 |
MS.gene013209.t1 | AT5G56450 | 25.497 | 302 | 195 | 6 | 203 | 481 | 32 | 326 | 1.01e-27 | 113 |
MS.gene013209.t1 | AT5G64970 | 30.537 | 298 | 167 | 9 | 191 | 462 | 121 | 404 | 3.77e-27 | 113 |
MS.gene013209.t1 | AT5G64970 | 28.492 | 179 | 120 | 3 | 299 | 477 | 135 | 305 | 1.26e-12 | 70.1 |
MS.gene013209.t1 | AT2G35800 | 21.978 | 455 | 323 | 12 | 35 | 481 | 380 | 810 | 3.80e-27 | 115 |
MS.gene013209.t1 | AT1G25380 | 28.261 | 276 | 176 | 7 | 217 | 476 | 33 | 302 | 6.13e-27 | 112 |
MS.gene013209.t1 | AT1G25380 | 28.261 | 276 | 176 | 7 | 217 | 476 | 33 | 302 | 6.13e-27 | 112 |
MS.gene013209.t1 | AT1G74240 | 28.028 | 289 | 175 | 6 | 221 | 480 | 4 | 288 | 1.79e-24 | 103 |
MS.gene013209.t1 | AT1G74240 | 28.646 | 192 | 110 | 5 | 313 | 481 | 2 | 189 | 1.82e-16 | 80.9 |
MS.gene013209.t1 | AT4G11440 | 26.733 | 303 | 196 | 8 | 192 | 482 | 317 | 605 | 8.15e-23 | 102 |
MS.gene013209.t1 | AT4G11440 | 26.733 | 303 | 196 | 8 | 192 | 482 | 317 | 605 | 8.15e-23 | 102 |
MS.gene013209.t1 | AT2G30160 | 28.720 | 289 | 182 | 8 | 203 | 477 | 40 | 318 | 1.51e-21 | 95.9 |
MS.gene013209.t1 | AT2G30160 | 27.322 | 183 | 123 | 4 | 299 | 480 | 42 | 215 | 1.46e-15 | 78.2 |
MS.gene013209.t1 | AT1G14140 | 24.161 | 298 | 205 | 8 | 195 | 477 | 6 | 297 | 1.88e-20 | 92.4 |
MS.gene013209.t1 | AT1G34065 | 26.689 | 296 | 187 | 8 | 191 | 481 | 59 | 329 | 2.75e-20 | 92.4 |
MS.gene013209.t1 | AT1G34065 | 26.689 | 296 | 187 | 8 | 191 | 481 | 66 | 336 | 2.92e-20 | 92.4 |
MS.gene013209.t1 | AT4G39460 | 28.520 | 277 | 174 | 6 | 205 | 480 | 58 | 311 | 5.59e-20 | 91.3 |
MS.gene013209.t1 | AT4G39460 | 28.520 | 277 | 174 | 6 | 205 | 480 | 58 | 311 | 5.59e-20 | 91.3 |
MS.gene013209.t1 | AT4G39460 | 28.520 | 277 | 174 | 6 | 205 | 480 | 58 | 311 | 5.59e-20 | 91.3 |
MS.gene013209.t1 | AT5G17400 | 25.517 | 290 | 196 | 6 | 195 | 468 | 4 | 289 | 6.68e-20 | 90.5 |
MS.gene013209.t1 | AT1G07030 | 28.421 | 285 | 185 | 8 | 203 | 477 | 38 | 313 | 8.66e-20 | 90.5 |
MS.gene013209.t1 | AT1G07030 | 28.962 | 183 | 120 | 4 | 299 | 480 | 40 | 213 | 6.14e-16 | 79.3 |
MS.gene013209.t1 | AT5G46800 | 26.230 | 305 | 195 | 8 | 199 | 480 | 2 | 299 | 1.23e-18 | 86.7 |
MS.gene013209.t1 | AT5G46800 | 26.230 | 305 | 195 | 8 | 199 | 480 | 2 | 299 | 1.23e-18 | 86.7 |
MS.gene013209.t1 | AT5G46800 | 26.230 | 305 | 195 | 8 | 199 | 480 | 2 | 299 | 1.23e-18 | 86.7 |
MS.gene013209.t1 | AT3G54110 | 27.551 | 294 | 184 | 9 | 203 | 478 | 13 | 295 | 1.85e-18 | 86.3 |
MS.gene013209.t1 | AT5G13490 | 27.273 | 286 | 177 | 7 | 205 | 468 | 88 | 364 | 1.06e-17 | 85.1 |
MS.gene013209.t1 | AT5G13490 | 27.273 | 286 | 177 | 7 | 205 | 468 | 88 | 364 | 1.06e-17 | 85.1 |
MS.gene013209.t1 | AT5G58970 | 26.962 | 293 | 183 | 9 | 205 | 478 | 16 | 296 | 1.17e-17 | 84.0 |
MS.gene013209.t1 | AT4G28390 | 27.758 | 281 | 181 | 9 | 205 | 468 | 83 | 358 | 1.22e-17 | 85.1 |
MS.gene013209.t1 | AT4G28390 | 27.758 | 281 | 181 | 9 | 205 | 468 | 83 | 358 | 1.22e-17 | 85.1 |
MS.gene013209.t1 | AT2G39970 | 27.511 | 229 | 134 | 8 | 280 | 482 | 101 | 323 | 3.26e-16 | 80.1 |
MS.gene013209.t1 | AT5G01340 | 24.390 | 287 | 192 | 10 | 206 | 476 | 18 | 295 | 3.81e-16 | 79.7 |
MS.gene013209.t1 | AT3G08580 | 25.267 | 281 | 189 | 6 | 205 | 468 | 84 | 360 | 7.46e-15 | 76.6 |
MS.gene013209.t1 | AT3G08580 | 25.267 | 281 | 189 | 6 | 205 | 468 | 84 | 360 | 7.46e-15 | 76.6 |
MS.gene013209.t1 | AT1G72820 | 23.676 | 321 | 212 | 7 | 191 | 478 | 16 | 336 | 8.57e-15 | 76.3 |
MS.gene013209.t1 | AT1G72820 | 26.512 | 215 | 122 | 7 | 208 | 388 | 131 | 343 | 5.87e-11 | 64.3 |
MS.gene013209.t1 | AT1G72820 | 23.676 | 321 | 212 | 7 | 191 | 478 | 16 | 336 | 8.57e-15 | 76.3 |
MS.gene013209.t1 | AT1G72820 | 26.512 | 215 | 122 | 7 | 208 | 388 | 131 | 343 | 5.87e-11 | 64.3 |
MS.gene013209.t1 | AT5G15640 | 24.759 | 311 | 206 | 9 | 195 | 483 | 11 | 315 | 8.70e-15 | 75.5 |
MS.gene013209.t1 | AT5G15640 | 30.952 | 210 | 122 | 8 | 190 | 380 | 106 | 311 | 2.76e-14 | 74.3 |
MS.gene013209.t1 | AT5G15640 | 30.952 | 210 | 122 | 8 | 190 | 380 | 113 | 318 | 3.21e-14 | 73.9 |
MS.gene013209.t1 | AT5G15640 | 24.510 | 306 | 203 | 9 | 200 | 483 | 23 | 322 | 4.55e-14 | 73.6 |
MS.gene013209.t1 | AT5G26200 | 24.752 | 303 | 203 | 7 | 200 | 478 | 34 | 335 | 4.35e-14 | 73.9 |
MS.gene013209.t1 | AT4G04720 | 31.944 | 144 | 91 | 3 | 20 | 157 | 370 | 512 | 6.75e-14 | 74.3 |
MS.gene013209.t1 | AT4G04720 | 31.944 | 144 | 91 | 3 | 20 | 157 | 370 | 512 | 6.75e-14 | 74.3 |
MS.gene013209.t1 | AT1G79900 | 22.593 | 270 | 201 | 2 | 211 | 480 | 22 | 283 | 7.50e-14 | 72.4 |
MS.gene013209.t1 | AT1G79900 | 28.402 | 169 | 117 | 3 | 208 | 375 | 112 | 277 | 9.20e-14 | 72.4 |
MS.gene013209.t1 | AT5G14040 | 29.032 | 248 | 158 | 9 | 208 | 441 | 84 | 327 | 5.43e-13 | 70.9 |
MS.gene013209.t1 | AT5G19760 | 23.860 | 285 | 199 | 8 | 203 | 478 | 16 | 291 | 5.64e-13 | 70.1 |
MS.gene013209.t1 | AT2G26360 | 23.571 | 280 | 196 | 6 | 203 | 480 | 113 | 376 | 8.39e-13 | 70.5 |
MS.gene013209.t1 | AT4G21940 | 30.556 | 144 | 93 | 3 | 20 | 157 | 392 | 534 | 1.60e-12 | 70.1 |
MS.gene013209.t1 | AT4G04740 | 31.690 | 142 | 90 | 3 | 26 | 161 | 365 | 505 | 1.62e-12 | 70.1 |
MS.gene013209.t1 | AT4G04740 | 31.690 | 142 | 90 | 3 | 26 | 161 | 365 | 505 | 1.62e-12 | 70.1 |
MS.gene013209.t1 | AT4G04740 | 31.690 | 142 | 90 | 3 | 26 | 161 | 365 | 505 | 1.62e-12 | 70.1 |
MS.gene013209.t1 | AT4G04740 | 31.690 | 142 | 90 | 3 | 26 | 161 | 365 | 505 | 1.62e-12 | 70.1 |
MS.gene013209.t1 | AT4G04740 | 31.690 | 142 | 90 | 3 | 26 | 161 | 365 | 505 | 1.62e-12 | 70.1 |
MS.gene013209.t1 | AT4G04740 | 31.690 | 142 | 90 | 3 | 26 | 161 | 365 | 505 | 1.62e-12 | 70.1 |
MS.gene013209.t1 | AT4G21940 | 30.556 | 144 | 93 | 3 | 20 | 157 | 392 | 534 | 1.67e-12 | 70.1 |
MS.gene013209.t1 | AT4G04695 | 29.730 | 148 | 97 | 3 | 20 | 161 | 322 | 468 | 4.93e-12 | 68.6 |
MS.gene013209.t1 | AT3G48850 | 27.237 | 257 | 162 | 9 | 204 | 441 | 66 | 316 | 1.50e-11 | 66.2 |
MS.gene013209.t1 | AT2G33820 | 23.607 | 305 | 198 | 12 | 203 | 483 | 16 | 309 | 2.30e-11 | 65.5 |
MS.gene013209.t1 | AT4G27940 | 27.727 | 220 | 128 | 8 | 193 | 387 | 195 | 408 | 3.23e-11 | 65.5 |
MS.gene013209.t1 | AT5G42130 | 25.094 | 267 | 180 | 8 | 221 | 477 | 134 | 390 | 5.89e-11 | 64.7 |
MS.gene013209.t1 | AT5G19360 | 31.111 | 135 | 87 | 3 | 28 | 157 | 368 | 501 | 8.17e-11 | 64.7 |
MS.gene013209.t1 | AT3G05290 | 24.662 | 296 | 184 | 12 | 207 | 476 | 13 | 295 | 8.75e-11 | 63.5 |
Find 109 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTAGGATGTGGGACAATTTC+TGG | 0.159419 | 3.2:-81671720 | MS.gene013209:CDS |
TTCTTTGATGGAGGGAATAA+TGG | 0.216426 | 3.2:-81674310 | MS.gene013209:CDS |
TAGAATTTGATTGCACTTTC+CGG | 0.232865 | 3.2:+81672231 | None:intergenic |
GAACAGTTCCGATGCTTATA+AGG | 0.241893 | 3.2:-81671500 | MS.gene013209:CDS |
ATCATGAATAATATATTTCT+TGG | 0.252850 | 3.2:+81671888 | None:intergenic |
GAACCCTCACAAAGAATATA+TGG | 0.303659 | 3.2:-81672020 | MS.gene013209:CDS |
CAATGAGTTTAGGAGATATA+TGG | 0.307264 | 3.2:-81674167 | MS.gene013209:CDS |
GGCACAACTTTGAGTAGATT+TGG | 0.313751 | 3.2:+81671409 | None:intergenic |
AGAGCATCCCAAAGCTCTTC+AGG | 0.318069 | 3.2:+81674076 | None:intergenic |
TTTCAGCATGAAGGCTTTAG+AGG | 0.319780 | 3.2:-81671451 | MS.gene013209:CDS |
CAAGGTAACAATTCGGATAT+TGG | 0.324252 | 3.2:-81672171 | MS.gene013209:CDS |
TATTCTTCCTGAAGAGCTTT+GGG | 0.324433 | 3.2:-81674083 | MS.gene013209:CDS |
TGATCTAGTGAAATGTTTCT+TGG | 0.329861 | 3.2:+81674397 | None:intergenic |
TATGGAAGCAAGATAATATA+CGG | 0.336371 | 3.2:-81672296 | MS.gene013209:CDS |
AGCTGCGAGCATTACTTATA+TGG | 0.341395 | 3.2:-81671386 | MS.gene013209:CDS |
GCGTGCTTGCTAATGTCTTC+AGG | 0.353904 | 3.2:+81672456 | None:intergenic |
GGGTTGATTACAATGAGTTT+AGG | 0.355020 | 3.2:-81674177 | MS.gene013209:CDS |
GGACTTCTTCCGTCTGTGAT+TGG | 0.367551 | 3.2:-81671967 | MS.gene013209:CDS |
GTATTCTTCCTGAAGAGCTT+TGG | 0.373610 | 3.2:-81674084 | MS.gene013209:CDS |
AGCTTTGGGATGCTCTTGAT+AGG | 0.382850 | 3.2:-81674069 | MS.gene013209:CDS |
TTTGTGAGGGTTCCAAGTTT+AGG | 0.385328 | 3.2:+81672030 | None:intergenic |
TTTCTTGGACATATCTTTCA+AGG | 0.392181 | 3.2:+81671903 | None:intergenic |
TTTCTGCAGTGACGACAATA+TGG | 0.399931 | 3.2:-81672314 | MS.gene013209:CDS |
AACAGTTCCGATGCTTATAA+GGG | 0.400067 | 3.2:-81671499 | MS.gene013209:CDS |
TCTTTGATGGAGGGAATAAT+GGG | 0.407756 | 3.2:-81674309 | MS.gene013209:CDS |
AATTCGGATATTGGTGCTGC+TGG | 0.411872 | 3.2:-81672162 | MS.gene013209:CDS |
GATCACGTGCTTGAGGCATT+AGG | 0.419468 | 3.2:-81674379 | MS.gene013209:CDS |
ATATATGGATGATAAGGAAT+TGG | 0.420302 | 3.2:-81674152 | MS.gene013209:CDS |
ATCAACCCTACCATCACTAT+TGG | 0.422211 | 3.2:+81674192 | None:intergenic |
CAATGCTGCAGGAATAGAAA+TGG | 0.442718 | 3.2:-81672655 | MS.gene013209:intron |
GATCTAGTGAAATGTTTCTT+GGG | 0.443011 | 3.2:+81674398 | None:intergenic |
ACATTAGCAAGCACGCTAAC+CGG | 0.449483 | 3.2:-81672449 | MS.gene013209:CDS |
GGTGGAAGGGCTCCTAAACT+TGG | 0.458284 | 3.2:-81672042 | MS.gene013209:CDS |
TGGGATGCTCTTGATAGGGC+TGG | 0.459417 | 3.2:-81674064 | MS.gene013209:intron |
TAGGAGATATATGGATGATA+AGG | 0.460917 | 3.2:-81674158 | MS.gene013209:CDS |
CTTGCATATTTATACTCCGC+TGG | 0.463043 | 3.2:+81674238 | None:intergenic |
GATTATGTTCAGATAGAGAA+AGG | 0.470841 | 3.2:-81674280 | MS.gene013209:CDS |
CACGTTGACAAGGACAATAA+TGG | 0.472418 | 3.2:-81672603 | MS.gene013209:CDS |
TTGAAAATATATATCACCAT+TGG | 0.474683 | 3.2:-81672521 | MS.gene013209:CDS |
CTCCATCAAAGAAATTGAAA+AGG | 0.478589 | 3.2:+81674320 | None:intergenic |
GCGAGATCAATGCCAGCATA+AGG | 0.481632 | 3.2:+81671937 | None:intergenic |
TGAAAATATATATCACCATT+GGG | 0.482057 | 3.2:-81672520 | MS.gene013209:CDS |
AAATATATTATTCATGATAG+TGG | 0.486766 | 3.2:-81671883 | MS.gene013209:intron |
AGAGGAGCTTGCTCGCTTTG+TGG | 0.489148 | 3.2:-81672628 | MS.gene013209:CDS |
GGGACAATTTCTGGAACCCT+TGG | 0.491674 | 3.2:-81671711 | MS.gene013209:CDS |
AGGTGAATCAAGAGAAGAAA+GGG | 0.492385 | 3.2:-81674359 | MS.gene013209:CDS |
CTATGGATCTTATCAAAACT+AGG | 0.493639 | 3.2:-81672086 | MS.gene013209:CDS |
CAGCGATAAAATATTTGCTC+CGG | 0.498497 | 3.2:+81672430 | None:intergenic |
TTTATCGCTGGAGGAATAGC+AGG | 0.510692 | 3.2:-81672417 | MS.gene013209:CDS |
CACTGCAGGTTATTCGTACT+AGG | 0.514009 | 3.2:-81671671 | MS.gene013209:intron |
CTTGGTCTCCAATGTCTACA+TGG | 0.514430 | 3.2:+81672487 | None:intergenic |
ATTATGTTCAGATAGAGAAA+GGG | 0.519083 | 3.2:-81674279 | MS.gene013209:CDS |
AATCCATATATTCTTTGTGA+GGG | 0.521242 | 3.2:+81672017 | None:intergenic |
ATTGGCATGATTCCTTATGC+TGG | 0.525188 | 3.2:-81671949 | MS.gene013209:CDS |
TACATGTGTCTATCCACTGC+AGG | 0.526699 | 3.2:-81671685 | MS.gene013209:CDS |
CCTAGTTGTACTAGAGGACC+AGG | 0.532372 | 3.2:+81671738 | None:intergenic |
AGATGCTCAAGGTAACAATT+CGG | 0.534432 | 3.2:-81672178 | MS.gene013209:CDS |
TGTCTTCAGGAATGACAGCT+TGG | 0.536068 | 3.2:+81672469 | None:intergenic |
CCTGGTCCTCTAGTACAACT+AGG | 0.536419 | 3.2:-81671738 | MS.gene013209:CDS |
CCTCTAGTACAACTAGGATG+TGG | 0.538045 | 3.2:-81671732 | MS.gene013209:CDS |
GCAGACCGCAATCTATCCTA+TGG | 0.541450 | 3.2:-81672103 | MS.gene013209:CDS |
GCTATTGATGTTGAACATAG+TGG | 0.542144 | 3.2:-81674109 | MS.gene013209:CDS |
AGGAGCCCTTCCACCTTCAG+AGG | 0.542507 | 3.2:+81672050 | None:intergenic |
ATATAAGTAATGCTCGCAGC+TGG | 0.542695 | 3.2:+81671388 | None:intergenic |
ATGGAAGCAAGATAATATAC+GGG | 0.544706 | 3.2:-81672295 | MS.gene013209:CDS |
GCTTTGGGATGCTCTTGATA+GGG | 0.545989 | 3.2:-81674068 | MS.gene013209:CDS |
GGCTTTAGAGGTTTCTACAA+AGG | 0.549054 | 3.2:-81671439 | MS.gene013209:CDS |
GTGATGCCAATAGTGATGGT+AGG | 0.551120 | 3.2:-81674198 | MS.gene013209:CDS |
AGGAATAGAAATGGATGAAG+AGG | 0.553086 | 3.2:-81672646 | MS.gene013209:CDS |
CAACTTTGAGTAGATTTGGA+AGG | 0.557888 | 3.2:+81671413 | None:intergenic |
TGCACCTCTCGATCGTCTGA+AGG | 0.558903 | 3.2:-81672373 | MS.gene013209:CDS |
CTTGTGCCTCTGAAGGTGGA+AGG | 0.560242 | 3.2:-81672056 | MS.gene013209:CDS |
CAGACTTGTGCCTCTGAAGG+TGG | 0.565219 | 3.2:-81672060 | MS.gene013209:CDS |
CTACAGACTTGTGCCTCTGA+AGG | 0.568315 | 3.2:-81672063 | MS.gene013209:CDS |
TAGGTGAATCAAGAGAAGAA+AGG | 0.568519 | 3.2:-81674360 | MS.gene013209:CDS |
TTAGCAGGTGGCGTGGCTGG+TGG | 0.570129 | 3.2:-81672132 | MS.gene013209:CDS |
TTGTGCCTCTGAAGGTGGAA+GGG | 0.574169 | 3.2:-81672055 | MS.gene013209:CDS |
CTAGTACGAATAACCTGCAG+TGG | 0.576215 | 3.2:+81671672 | None:intergenic |
TTCACTAGATCACGTGCTTG+AGG | 0.578433 | 3.2:-81674386 | MS.gene013209:CDS |
ATTCGGATATTGGTGCTGCT+GGG | 0.584583 | 3.2:-81672161 | MS.gene013209:CDS |
AAACATTCCCTTATAAGCAT+CGG | 0.584700 | 3.2:+81671492 | None:intergenic |
GAATCCATATATTCTTTGTG+AGG | 0.586586 | 3.2:+81672016 | None:intergenic |
AAGAATATATGGATTCAAGA+AGG | 0.587277 | 3.2:-81672009 | MS.gene013209:CDS |
GAATGTTGTGAAGGTAGCAC+CGG | 0.587546 | 3.2:-81672250 | MS.gene013209:CDS |
CTTTGTGGAGCACGTTGACA+AGG | 0.587754 | 3.2:-81672613 | MS.gene013209:CDS |
TGATGCCAATAGTGATGGTA+GGG | 0.593762 | 3.2:-81674197 | MS.gene013209:CDS |
CAAATCAACACAATGGGTGG+TGG | 0.594305 | 3.2:-81674439 | None:intergenic |
TTTCAATAGTTGCTTCATGA+GGG | 0.596353 | 3.2:+81672538 | None:intergenic |
GATAGACACATGTAGCTCCA+AGG | 0.598066 | 3.2:+81671694 | None:intergenic |
CTCTAGTACAACTAGGATGT+GGG | 0.600264 | 3.2:-81671731 | MS.gene013209:CDS |
CGGATATTGGTGCTGCTGGG+AGG | 0.600630 | 3.2:-81672158 | MS.gene013209:CDS |
AAAGTAATTGGAGATGCTCA+AGG | 0.602778 | 3.2:-81672189 | MS.gene013209:CDS |
AGAGTGTACCATGTAGACAT+TGG | 0.605955 | 3.2:-81672495 | MS.gene013209:CDS |
AACCAAATCAACACAATGGG+TGG | 0.607177 | 3.2:-81674442 | None:intergenic |
TAATGGATTGAATGTTGTGA+AGG | 0.610631 | 3.2:-81672259 | MS.gene013209:CDS |
CAACATTCAATCCATTACCT+CGG | 0.611488 | 3.2:+81672265 | None:intergenic |
ATCTGCATTGCAAATTCCAG+CGG | 0.612606 | 3.2:-81674254 | MS.gene013209:CDS |
CCACATCCTAGTTGTACTAG+AGG | 0.616859 | 3.2:+81671732 | None:intergenic |
CATGGTACACTCTCTCCCAA+TGG | 0.626001 | 3.2:+81672505 | None:intergenic |
GGAATCATGCCAATCACAGA+CGG | 0.632261 | 3.2:+81671958 | None:intergenic |
ATAGACACATGTAGCTCCAA+GGG | 0.639088 | 3.2:+81671695 | None:intergenic |
TCACAGACGGAAGAAGTCCT+CGG | 0.639212 | 3.2:+81671971 | None:intergenic |
GTTTGTGATGCCAATAGTGA+TGG | 0.647265 | 3.2:-81674202 | MS.gene013209:CDS |
ACGATCGAGAGGTGCAGTCG+CGG | 0.656594 | 3.2:+81672380 | None:intergenic |
ATCACCTTCAGACGATCGAG+AGG | 0.659545 | 3.2:+81672369 | None:intergenic |
GGACCTCGAGCTTTCTACCG+AGG | 0.662290 | 3.2:-81671988 | MS.gene013209:CDS |
AAGATCCATAGGATAGATTG+CGG | 0.679419 | 3.2:+81672098 | None:intergenic |
AGTCCTCGGTAGAAAGCTCG+AGG | 0.680432 | 3.2:+81671985 | None:intergenic |
TGGAAGCAAGATAATATACG+GGG | 0.738439 | 3.2:-81672294 | MS.gene013209:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAGAAATATTAAATGATGA+AGG | - | chr3.2:81672336-81672355 | MS.gene013209:CDS | 15.0% |
!! | AAATATATTATTCATGATAG+TGG | - | chr3.2:81673892-81673911 | MS.gene013209:intron | 15.0% |
!! | ATCATGAATAATATATTTCT+TGG | + | chr3.2:81673890-81673909 | None:intergenic | 15.0% |
!! | GTATTTATTCAAAAATAGAA+GGG | - | chr3.2:81672544-81672563 | MS.gene013209:CDS | 15.0% |
!! | TAGAAATAATTACTTTATGT+AGG | - | chr3.2:81671811-81671830 | MS.gene013209:intron | 15.0% |
!!! | AGTATTTAATGATTTTTAAG+AGG | - | chr3.2:81672056-81672075 | MS.gene013209:CDS | 15.0% |
!!! | GTTTTGTATTTGTTATTTTA+GGG | - | chr3.2:81674196-81674215 | MS.gene013209:CDS | 15.0% |
!! | AATGGAAAATGTATAAACTT+GGG | + | chr3.2:81672938-81672957 | None:intergenic | 20.0% |
!! | ACAATAAAACTTTCACAAAA+AGG | + | chr3.2:81673060-81673079 | None:intergenic | 20.0% |
!! | GAAATGTTGAAAAAAGTAAT+TGG | - | chr3.2:81673574-81673593 | MS.gene013209:intron | 20.0% |
!! | GGTATTTATTCAAAAATAGA+AGG | - | chr3.2:81672543-81672562 | MS.gene013209:CDS | 20.0% |
!! | TAAATGATGAAGGTTATTAT+AGG | - | chr3.2:81672346-81672365 | MS.gene013209:CDS | 20.0% |
!! | TGAAAATATATATCACCATT+GGG | - | chr3.2:81673255-81673274 | MS.gene013209:intron | 20.0% |
!! | TTGAAAATATATATCACCAT+TGG | - | chr3.2:81673254-81673273 | MS.gene013209:intron | 20.0% |
!!! | GGTTTTGTATTTGTTATTTT+AGG | - | chr3.2:81674195-81674214 | MS.gene013209:CDS | 20.0% |
!!! | GTAAAATGTAAATGTTTTCT+TGG | - | chr3.2:81672397-81672416 | MS.gene013209:CDS | 20.0% |
!!! | TGGTTATTTCTTACTATTTT+TGG | - | chr3.2:81671777-81671796 | MS.gene013209:intron | 20.0% |
!!! | TTACATTTTAATCCTTTTTC+AGG | - | chr3.2:81674235-81674254 | MS.gene013209:CDS | 20.0% |
! | AAGAATATATGGATTCAAGA+AGG | - | chr3.2:81673766-81673785 | MS.gene013209:intron | 25.0% |
! | AAGTGACAATTAAAAAGGAA+CGG | - | chr3.2:81672438-81672457 | MS.gene013209:CDS | 25.0% |
! | AAGTGACAATTAAAAAGGAA+CGG | + | chr3.2:81672457-81672438 | None:intergenic | 25.0% |
! | AATCCATATATTCTTTGTGA+GGG | + | chr3.2:81673761-81673780 | None:intergenic | 25.0% |
! | ACCAAAAAAGATTAAACTAG+AGG | + | chr3.2:81671761-81671780 | None:intergenic | 25.0% |
! | ATATATGGATGATAAGGAAT+TGG | - | chr3.2:81671623-81671642 | MS.gene013209:intron | 25.0% |
! | ATGATTCTGATCATTTCATT+TGG | + | chr3.2:81674158-81674177 | None:intergenic | 25.0% |
! | ATTATGTTCAGATAGAGAAA+GGG | - | chr3.2:81671496-81671515 | MS.gene013209:CDS | 25.0% |
! | GAATGGAAAATGTATAAACT+TGG | + | chr3.2:81672939-81672958 | None:intergenic | 25.0% |
! | GAGTACATAATAAATATAGG+GGG | + | chr3.2:81672176-81672195 | None:intergenic | 25.0% |
! | GGAGTACATAATAAATATAG+GGG | + | chr3.2:81672177-81672196 | None:intergenic | 25.0% |
! | GTAAATCAAGCTTGTAATAT+TGG | - | chr3.2:81672753-81672772 | MS.gene013209:intron | 25.0% |
! | GTAACAAACACAATATAGAA+TGG | + | chr3.2:81672956-81672975 | None:intergenic | 25.0% |
! | TAAATAACCAAGGGTAATAA+AGG | + | chr3.2:81672294-81672313 | None:intergenic | 25.0% |
! | TATGGAAGCAAGATAATATA+CGG | - | chr3.2:81673479-81673498 | MS.gene013209:intron | 25.0% |
! | TCTCAACAAATAACTATGAT+GGG | - | chr3.2:81672522-81672541 | MS.gene013209:CDS | 25.0% |
! | TGCAAAAGTGACAATTAAAA+AGG | + | chr3.2:81672207-81672226 | None:intergenic | 25.0% |
! | TGCTTATGATAAATACTATC+AGG | + | chr3.2:81673090-81673109 | None:intergenic | 25.0% |
! | TTCTCAACAAATAACTATGA+TGG | - | chr3.2:81672521-81672540 | MS.gene013209:CDS | 25.0% |
!! | AGGGAGTACATAATAAATAT+AGG | + | chr3.2:81672179-81672198 | None:intergenic | 25.0% |
!! | AGTTTAGGATAAATGGAAAT+TGG | - | chr3.2:81672791-81672810 | MS.gene013209:intron | 25.0% |
!! | CTTATGTAGTTTAGGATAAA+TGG | - | chr3.2:81672784-81672803 | MS.gene013209:intron | 25.0% |
!! | CTTTTAGACTTATGTAGTTT+AGG | - | chr3.2:81672776-81672795 | MS.gene013209:intron | 25.0% |
!! | GGGAGTACATAATAAATATA+GGG | + | chr3.2:81672178-81672197 | None:intergenic | 25.0% |
!! | TATATGCTTTGCCTTTTTAA+CGG | - | chr3.2:81672843-81672862 | MS.gene013209:intron | 25.0% |
!! | TTGTTACATCTTTGTTTGTT+TGG | - | chr3.2:81672969-81672988 | MS.gene013209:intron | 25.0% |
!! | TTTTCAATTTCTTTGATGGA+GGG | - | chr3.2:81671457-81671476 | MS.gene013209:CDS | 25.0% |
!!! | CCTTTTTAATTGTCACTTTT+GGG | + | chr3.2:81672223-81672204 | None:intergenic | 25.0% |
!!! | CTTTTTAATTGTCACTTTTG+GGG | + | chr3.2:81672224-81672205 | None:intergenic | 25.0% |
!!! | GAAATAGTTTCACTTTTCAA+AGG | + | chr3.2:81673989-81674008 | None:intergenic | 25.0% |
!!! | TAACTTTTCTACTTTAAGAC+TGG | + | chr3.2:81671897-81671916 | None:intergenic | 25.0% |
!!! | TAATGATTTTTAAGAGGAGA+TGG | - | chr3.2:81672062-81672081 | MS.gene013209:CDS | 25.0% |
!!! | TATTATTCATGATAGTGGTA+TGG | - | chr3.2:81673897-81673916 | MS.gene013209:intron | 25.0% |
!!! | TCATTTTTGTTTTTCAGAAC+TGG | - | chr3.2:81674174-81674193 | MS.gene013209:CDS | 25.0% |
!!! | TCCTTTTTAATTGTCACTTT+TGG | + | chr3.2:81672222-81672203 | None:intergenic | 25.0% |
!!! | TGTAGGTTGAGTTTTTTATT+AGG | - | chr3.2:81671828-81671847 | MS.gene013209:intron | 25.0% |
AAACATTCCCTTATAAGCAT+CGG | + | chr3.2:81674286-81674305 | None:intergenic | 30.0% | |
AAACTAGAGGCAAAACAAAA+AGG | + | chr3.2:81671748-81671767 | None:intergenic | 30.0% | |
ACATAATAAATATAGGGGGA+GGG | + | chr3.2:81672172-81672191 | None:intergenic | 30.0% | |
AGGTATGTTTAAATAGCACA+TGG | + | chr3.2:81672570-81672589 | None:intergenic | 30.0% | |
AGTATTGTGGATATTGAAGA+TGG | - | chr3.2:81673030-81673049 | MS.gene013209:intron | 30.0% | |
ATGGAAGCAAGATAATATAC+GGG | - | chr3.2:81673480-81673499 | MS.gene013209:intron | 30.0% | |
ATTGAAACATAATTGCAAGG+AGG | - | chr3.2:81672487-81672506 | MS.gene013209:CDS | 30.0% | |
CAATGAGTTTAGGAGATATA+TGG | - | chr3.2:81671608-81671627 | MS.gene013209:intron | 30.0% | |
CCCAAAAGTGACAATTAAAA+AGG | - | chr3.2:81672433-81672452 | MS.gene013209:CDS | 30.0% | |
CTATGGATCTTATCAAAACT+AGG | - | chr3.2:81673689-81673708 | MS.gene013209:intron | 30.0% | |
CTCCATCAAAGAAATTGAAA+AGG | + | chr3.2:81671458-81671477 | None:intergenic | 30.0% | |
CTGATCATTTCATTTGGATA+AGG | + | chr3.2:81674152-81674171 | None:intergenic | 30.0% | |
GAAAAGCCAAAGTTTGAATT+CGG | - | chr3.2:81671959-81671978 | MS.gene013209:CDS | 30.0% | |
GAAAATGTATAAACTTGGGA+AGG | + | chr3.2:81672934-81672953 | None:intergenic | 30.0% | |
GAATCCATATATTCTTTGTG+AGG | + | chr3.2:81673762-81673781 | None:intergenic | 30.0% | |
GATAAATGGAAATTGGATTG+TGG | - | chr3.2:81672798-81672817 | MS.gene013209:intron | 30.0% | |
GATCTAGTGAAATGTTTCTT+GGG | + | chr3.2:81671380-81671399 | None:intergenic | 30.0% | |
GATTATGTTCAGATAGAGAA+AGG | - | chr3.2:81671495-81671514 | MS.gene013209:CDS | 30.0% | |
GTGGATTCTATTATTGTGAA+GGG | - | chr3.2:81672817-81672836 | MS.gene013209:intron | 30.0% | |
GTTAAAATGTCCCGTTAAAA+AGG | + | chr3.2:81672857-81672876 | None:intergenic | 30.0% | |
TACATAATAAATATAGGGGG+AGG | + | chr3.2:81672173-81672192 | None:intergenic | 30.0% | |
TAGAATTTGATTGCACTTTC+CGG | + | chr3.2:81673547-81673566 | None:intergenic | 30.0% | |
TAGGAGATATATGGATGATA+AGG | - | chr3.2:81671617-81671636 | MS.gene013209:intron | 30.0% | |
TCCTTGCAATTATGTTTCAA+TGG | + | chr3.2:81672488-81672507 | None:intergenic | 30.0% | |
TCTCTGCAATAAATAACCAA+GGG | + | chr3.2:81672303-81672322 | None:intergenic | 30.0% | |
TGATCTAGTGAAATGTTTCT+TGG | + | chr3.2:81671381-81671400 | None:intergenic | 30.0% | |
TGTCTTACACAGAATAGTAT+GGG | + | chr3.2:81672126-81672145 | None:intergenic | 30.0% | |
TGTGGATTCTATTATTGTGA+AGG | - | chr3.2:81672816-81672835 | MS.gene013209:intron | 30.0% | |
TTGTCTTACACAGAATAGTA+TGG | + | chr3.2:81672127-81672146 | None:intergenic | 30.0% | |
TTTCAATAGTTGCTTCATGA+GGG | + | chr3.2:81673240-81673259 | None:intergenic | 30.0% | |
TTTCTTGGACATATCTTTCA+AGG | + | chr3.2:81673875-81673894 | None:intergenic | 30.0% | |
! | AGCCTTTTCAATTTCTTTGA+TGG | - | chr3.2:81671453-81671472 | MS.gene013209:CDS | 30.0% |
! | ATATGCTTTGCCTTTTTAAC+GGG | - | chr3.2:81672844-81672863 | MS.gene013209:intron | 30.0% |
! | CTTTTCAATTTCTTTGATGG+AGG | - | chr3.2:81671456-81671475 | MS.gene013209:CDS | 30.0% |
! | TTTTCAATAGTTGCTTCATG+AGG | + | chr3.2:81673241-81673260 | None:intergenic | 30.0% |
!! | GAACTATCACTTTTGAAGAA+TGG | - | chr3.2:81673194-81673213 | MS.gene013209:intron | 30.0% |
!! | TAATGGATTGAATGTTGTGA+AGG | - | chr3.2:81673516-81673535 | MS.gene013209:intron | 30.0% |
!!! | CTAGTTTTGATAAGATCCAT+AGG | + | chr3.2:81673691-81673710 | None:intergenic | 30.0% |
!!! | GCCTCTAGTTTAATCTTTTT+TGG | - | chr3.2:81671757-81671776 | MS.gene013209:intron | 30.0% |
AAAGTAATTGGAGATGCTCA+AGG | - | chr3.2:81673586-81673605 | MS.gene013209:intron | 35.0% | |
AACAGTTCCGATGCTTATAA+GGG | - | chr3.2:81674276-81674295 | MS.gene013209:CDS | 35.0% | |
AAGATCCATAGGATAGATTG+CGG | + | chr3.2:81673680-81673699 | None:intergenic | 35.0% | |
AGATGCTCAAGGTAACAATT+CGG | - | chr3.2:81673597-81673616 | MS.gene013209:intron | 35.0% | |
AGGAATAGAAATGGATGAAG+AGG | - | chr3.2:81673129-81673148 | MS.gene013209:intron | 35.0% | |
AGGTGAATCAAGAGAAGAAA+GGG | - | chr3.2:81671416-81671435 | MS.gene013209:CDS | 35.0% | |
ATTTAAGCACACCTCAAGAA+AGG | + | chr3.2:81672094-81672113 | None:intergenic | 35.0% | |
CAACATTCAATCCATTACCT+CGG | + | chr3.2:81673513-81673532 | None:intergenic | 35.0% | |
CAACTTTGAGTAGATTTGGA+AGG | + | chr3.2:81674365-81674384 | None:intergenic | 35.0% | |
CAAGGTAACAATTCGGATAT+TGG | - | chr3.2:81673604-81673623 | MS.gene013209:intron | 35.0% | |
CAGCGATAAAATATTTGCTC+CGG | + | chr3.2:81673348-81673367 | None:intergenic | 35.0% | |
CAGTTAGTCAACATTCTTCA+CGG | + | chr3.2:81672896-81672915 | None:intergenic | 35.0% | |
CATAATAAATATAGGGGGAG+GGG | + | chr3.2:81672171-81672190 | None:intergenic | 35.0% | |
CTCTCTGCAATAAATAACCA+AGG | + | chr3.2:81672304-81672323 | None:intergenic | 35.0% | |
GAACCCTCACAAAGAATATA+TGG | - | chr3.2:81673755-81673774 | MS.gene013209:intron | 35.0% | |
GAATTGAAGAGTGAAGACAT+CGG | + | chr3.2:81672672-81672691 | None:intergenic | 35.0% | |
GACAATTAAAAAGGAACGGA+GGG | - | chr3.2:81672442-81672461 | MS.gene013209:CDS | 35.0% | |
GACAATTAAAAAGGAACGGA+GGG | + | chr3.2:81672461-81672442 | None:intergenic | 35.0% | |
GCCATTGAAACATAATTGCA+AGG | - | chr3.2:81672484-81672503 | MS.gene013209:CDS | 35.0% | |
GCTATTGATGTTGAACATAG+TGG | - | chr3.2:81671666-81671685 | MS.gene013209:intron | 35.0% | |
TAAACATACCTTCTCACTAG+AGG | - | chr3.2:81672579-81672598 | MS.gene013209:CDS | 35.0% | |
TAGGTGAATCAAGAGAAGAA+AGG | - | chr3.2:81671415-81671434 | MS.gene013209:CDS | 35.0% | |
TATTCTTCCTGAAGAGCTTT+GGG | - | chr3.2:81671692-81671711 | MS.gene013209:CDS | 35.0% | |
TCTTTGATGGAGGGAATAAT+GGG | - | chr3.2:81671466-81671485 | MS.gene013209:CDS | 35.0% | |
TGACAATTAAAAAGGAACGG+AGG | - | chr3.2:81672441-81672460 | MS.gene013209:CDS | 35.0% | |
TGACAATTAAAAAGGAACGG+AGG | + | chr3.2:81672460-81672441 | None:intergenic | 35.0% | |
TGGAAGCAAGATAATATACG+GGG | - | chr3.2:81673481-81673500 | MS.gene013209:intron | 35.0% | |
TTCTTTGATGGAGGGAATAA+TGG | - | chr3.2:81671465-81671484 | MS.gene013209:CDS | 35.0% | |
! | AGCAAATATTTTATCGCTGG+AGG | - | chr3.2:81673349-81673368 | MS.gene013209:intron | 35.0% |
! | ATATGCAAGAGAGCTTTTCA+TGG | - | chr3.2:81671551-81671570 | MS.gene013209:intron | 35.0% |
! | GGGTTGATTACAATGAGTTT+AGG | - | chr3.2:81671598-81671617 | MS.gene013209:intron | 35.0% |
! | TGTAGAACTTTTCAGCATGA+AGG | - | chr3.2:81674315-81674334 | MS.gene013209:CDS | 35.0% |
! | TGTTTTGCCTTTATTACCCT+TGG | - | chr3.2:81672284-81672303 | MS.gene013209:CDS | 35.0% |
!!! | TTAATCCTTTTTCAGGCTTC+AGG | - | chr3.2:81674242-81674261 | MS.gene013209:CDS | 35.0% |
!!! | TTACCCAAGTGTTTTTTCCA+CGG | + | chr3.2:81672033-81672052 | None:intergenic | 35.0% |
AACCAGCCGAATTCAAACTT+TGG | + | chr3.2:81671968-81671987 | None:intergenic | 40.0% | |
AGAGTGTACCATGTAGACAT+TGG | - | chr3.2:81673280-81673299 | MS.gene013209:intron | 40.0% | |
AGCTGCGAGCATTACTTATA+TGG | - | chr3.2:81674389-81674408 | MS.gene013209:CDS | 40.0% | |
ATAGACACATGTAGCTCCAA+GGG | + | chr3.2:81674083-81674102 | None:intergenic | 40.0% | |
ATATAAGTAATGCTCGCAGC+TGG | + | chr3.2:81674390-81674409 | None:intergenic | 40.0% | |
ATCAACCCTACCATCACTAT+TGG | + | chr3.2:81671586-81671605 | None:intergenic | 40.0% | |
ATCTGCATTGCAAATTCCAG+CGG | - | chr3.2:81671521-81671540 | MS.gene013209:CDS | 40.0% | |
ATTGGCATGATTCCTTATGC+TGG | - | chr3.2:81673826-81673845 | MS.gene013209:intron | 40.0% | |
CAATATCCACAATACTGCAG+TGG | + | chr3.2:81673026-81673045 | None:intergenic | 40.0% | |
CAATGCTGCAGGAATAGAAA+TGG | - | chr3.2:81673120-81673139 | MS.gene013209:intron | 40.0% | |
CACGTTGACAAGGACAATAA+TGG | - | chr3.2:81673172-81673191 | MS.gene013209:intron | 40.0% | |
CACTCTTCAATTCACTGATC+AGG | - | chr3.2:81672679-81672698 | MS.gene013209:intron | 40.0% | |
CTCTAGTACAACTAGGATGT+GGG | - | chr3.2:81674044-81674063 | MS.gene013209:intron | 40.0% | |
CTTGCATATTTATACTCCGC+TGG | + | chr3.2:81671540-81671559 | None:intergenic | 40.0% | |
GAACAGTTCCGATGCTTATA+AGG | - | chr3.2:81674275-81674294 | MS.gene013209:CDS | 40.0% | |
GGCACAACTTTGAGTAGATT+TGG | + | chr3.2:81674369-81674388 | None:intergenic | 40.0% | |
GTATTCTTCCTGAAGAGCTT+TGG | - | chr3.2:81671691-81671710 | MS.gene013209:CDS | 40.0% | |
GTTTGTGATGCCAATAGTGA+TGG | - | chr3.2:81671573-81671592 | MS.gene013209:intron | 40.0% | |
TCACGGATAACTGTTACAAC+TGG | + | chr3.2:81672879-81672898 | None:intergenic | 40.0% | |
TGATGCCAATAGTGATGGTA+GGG | - | chr3.2:81671578-81671597 | MS.gene013209:intron | 40.0% | |
TTCGTGTCAGACACTAAATG+TGG | + | chr3.2:81671998-81672017 | None:intergenic | 40.0% | |
TTTAGTGTCTGACACGAACA+AGG | - | chr3.2:81672000-81672019 | MS.gene013209:CDS | 40.0% | |
TTTCTGCAGTGACGACAATA+TGG | - | chr3.2:81673461-81673480 | MS.gene013209:intron | 40.0% | |
TTTGTGAGGGTTCCAAGTTT+AGG | + | chr3.2:81673748-81673767 | None:intergenic | 40.0% | |
! | AACGGAGGGAGTATAAGTAT+AGG | - | chr3.2:81672456-81672475 | MS.gene013209:CDS | 40.0% |
! | AATATACGGGGATTTTTCCG+AGG | - | chr3.2:81673493-81673512 | MS.gene013209:intron | 40.0% |
! | ACGGAGGGAGTATAAGTATA+GGG | - | chr3.2:81672457-81672476 | MS.gene013209:CDS | 40.0% |
! | CGGAGCAAATATTTTATCGC+TGG | - | chr3.2:81673346-81673365 | MS.gene013209:intron | 40.0% |
! | TTTCAGCATGAAGGCTTTAG+AGG | - | chr3.2:81674324-81674343 | MS.gene013209:CDS | 40.0% |
!! | GGCTTTAGAGGTTTCTACAA+AGG | - | chr3.2:81674336-81674355 | MS.gene013209:CDS | 40.0% |
!!! | TACCCAAGTGTTTTTTCCAC+GGG | + | chr3.2:81672032-81672051 | None:intergenic | 40.0% |
AATAAATATAGGGGGAGGGG+AGG | + | chr3.2:81672168-81672187 | None:intergenic | 45.0% | |
ACATTAGCAAGCACGCTAAC+CGG | - | chr3.2:81673326-81673345 | MS.gene013209:intron | 45.0% | |
AGCCAAAGTTTGAATTCGGC+TGG | - | chr3.2:81671963-81671982 | MS.gene013209:CDS | 45.0% | |
ATAAATATAGGGGGAGGGGA+GGG | + | chr3.2:81672167-81672186 | None:intergenic | 45.0% | |
ATGAGCAGTTTCAATGCTGC+AGG | - | chr3.2:81673109-81673128 | MS.gene013209:intron | 45.0% | |
CACTGCAGGTTATTCGTACT+AGG | - | chr3.2:81674104-81674123 | MS.gene013209:CDS | 45.0% | |
CCACATCCTAGTTGTACTAG+AGG | + | chr3.2:81674046-81674065 | None:intergenic | 45.0% | |
CCTCTAGTACAACTAGGATG+TGG | - | chr3.2:81674043-81674062 | MS.gene013209:intron | 45.0% | |
CTAGGATGTGGGACAATTTC+TGG | - | chr3.2:81674055-81674074 | MS.gene013209:intron | 45.0% | |
CTAGTACGAATAACCTGCAG+TGG | + | chr3.2:81674106-81674125 | None:intergenic | 45.0% | |
CTCCCGTGGAAAAAACACTT+GGG | - | chr3.2:81672027-81672046 | MS.gene013209:CDS | 45.0% | |
CTTGGTCTCCAATGTCTACA+TGG | + | chr3.2:81673291-81673310 | None:intergenic | 45.0% | |
GAATGTTGTGAAGGTAGCAC+CGG | - | chr3.2:81673525-81673544 | MS.gene013209:intron | 45.0% | |
GATAGACACATGTAGCTCCA+AGG | + | chr3.2:81674084-81674103 | None:intergenic | 45.0% | |
GGAATCATGCCAATCACAGA+CGG | + | chr3.2:81673820-81673839 | None:intergenic | 45.0% | |
GTGATGCCAATAGTGATGGT+AGG | - | chr3.2:81671577-81671596 | MS.gene013209:intron | 45.0% | |
TACATGTGTCTATCCACTGC+AGG | - | chr3.2:81674090-81674109 | MS.gene013209:CDS | 45.0% | |
TAGAGGACCAGGATCTATGA+AGG | + | chr3.2:81674029-81674048 | None:intergenic | 45.0% | |
TGTCTTCAGGAATGACAGCT+TGG | + | chr3.2:81673309-81673328 | None:intergenic | 45.0% | |
TTCACTAGATCACGTGCTTG+AGG | - | chr3.2:81671389-81671408 | MS.gene013209:CDS | 45.0% | |
TTGTGCCTGAAGCCTGAAAA+AGG | + | chr3.2:81674250-81674269 | None:intergenic | 45.0% | |
TTTATCGCTGGAGGAATAGC+AGG | - | chr3.2:81673358-81673377 | MS.gene013209:intron | 45.0% | |
TTTCCCTCCTTCATAGATCC+TGG | - | chr3.2:81674019-81674038 | MS.gene013209:intron | 45.0% | |
! | AGTTTGAATTCGGCTGGTTG+AGG | - | chr3.2:81671969-81671988 | MS.gene013209:CDS | 45.0% |
! | CGGAGGGAGTATAAGTATAG+GGG | - | chr3.2:81672458-81672477 | MS.gene013209:CDS | 45.0% |
!! | AATTCGGATATTGGTGCTGC+TGG | - | chr3.2:81673613-81673632 | MS.gene013209:intron | 45.0% |
!! | AGCTTTGGGATGCTCTTGAT+AGG | - | chr3.2:81671706-81671725 | MS.gene013209:CDS | 45.0% |
!! | ATTCGGATATTGGTGCTGCT+GGG | - | chr3.2:81673614-81673633 | MS.gene013209:intron | 45.0% |
!! | GATGGTTCTGACCTTTCTTG+AGG | - | chr3.2:81672080-81672099 | MS.gene013209:CDS | 45.0% |
!! | GCTTTGGGATGCTCTTGATA+GGG | - | chr3.2:81671707-81671726 | MS.gene013209:CDS | 45.0% |
!! | TAATAACTTTAAATTAAAAA+GGG | + | chr3.2:81672617-81672636 | None:intergenic | 5.0% |
!! | TTAATAACTTTAAATTAAAA+AGG | + | chr3.2:81672618-81672637 | None:intergenic | 5.0% |
AGGACCAGGATCTATGAAGG+AGG | + | chr3.2:81674026-81674045 | None:intergenic | 50.0% | |
ATCACCTTCAGACGATCGAG+AGG | + | chr3.2:81673409-81673428 | None:intergenic | 50.0% | |
CATGGTACACTCTCTCCCAA+TGG | + | chr3.2:81673273-81673292 | None:intergenic | 50.0% | |
CCTAGTTGTACTAGAGGACC+AGG | + | chr3.2:81674040-81674059 | None:intergenic | 50.0% | |
CCTCCCGTGGAAAAAACACT+TGG | - | chr3.2:81672026-81672045 | MS.gene013209:CDS | 50.0% | |
CCTGGTCCTCTAGTACAACT+AGG | - | chr3.2:81674037-81674056 | MS.gene013209:intron | 50.0% | |
CGCATACACCTCTAGTGAGA+AGG | + | chr3.2:81672590-81672609 | None:intergenic | 50.0% | |
CTACAGACTTGTGCCTCTGA+AGG | - | chr3.2:81673712-81673731 | MS.gene013209:intron | 50.0% | |
CTCTGACCACTGCAGTATTG+TGG | - | chr3.2:81673017-81673036 | MS.gene013209:intron | 50.0% | |
CTTTGTGGAGCACGTTGACA+AGG | - | chr3.2:81673162-81673181 | MS.gene013209:intron | 50.0% | |
GCAGACCGCAATCTATCCTA+TGG | - | chr3.2:81673672-81673691 | MS.gene013209:intron | 50.0% | |
GCGAGATCAATGCCAGCATA+AGG | + | chr3.2:81673841-81673860 | None:intergenic | 50.0% | |
GGACCAGGATCTATGAAGGA+GGG | + | chr3.2:81674025-81674044 | None:intergenic | 50.0% | |
GGACTTCTTCCGTCTGTGAT+TGG | - | chr3.2:81673808-81673827 | MS.gene013209:intron | 50.0% | |
TCACAGACGGAAGAAGTCCT+CGG | + | chr3.2:81673807-81673826 | None:intergenic | 50.0% | |
! | AGAGCATCCCAAAGCTCTTC+AGG | + | chr3.2:81671702-81671721 | None:intergenic | 50.0% |
! | CGGGGATTTTTCCGAGGTAA+TGG | - | chr3.2:81673499-81673518 | MS.gene013209:intron | 50.0% |
! | GATCACGTGCTTGAGGCATT+AGG | - | chr3.2:81671396-81671415 | MS.gene013209:CDS | 50.0% |
! | GCGTGCTTGCTAATGTCTTC+AGG | + | chr3.2:81673322-81673341 | None:intergenic | 50.0% |
! | TTGTGCCTCTGAAGGTGGAA+GGG | - | chr3.2:81673720-81673739 | MS.gene013209:intron | 50.0% |
!! | GGGACAATTTCTGGAACCCT+TGG | - | chr3.2:81674064-81674083 | MS.gene013209:intron | 50.0% |
!!! | CCAAGTGTTTTTTCCACGGG+AGG | + | chr3.2:81672029-81672048 | None:intergenic | 50.0% |
ACGAACAAGGTTACCTCCCG+TGG | - | chr3.2:81672013-81672032 | MS.gene013209:CDS | 55.0% | |
AGTCCTCGGTAGAAAGCTCG+AGG | + | chr3.2:81673793-81673812 | None:intergenic | 55.0% | |
GGTGGAAGGGCTCCTAAACT+TGG | - | chr3.2:81673733-81673752 | MS.gene013209:intron | 55.0% | |
TGCACCTCTCGATCGTCTGA+AGG | - | chr3.2:81673402-81673421 | MS.gene013209:intron | 55.0% | |
TGGGATGCTCTTGATAGGGC+TGG | - | chr3.2:81671711-81671730 | MS.gene013209:CDS | 55.0% | |
! | AGAGGAGCTTGCTCGCTTTG+TGG | - | chr3.2:81673147-81673166 | MS.gene013209:intron | 55.0% |
! | CAGACTTGTGCCTCTGAAGG+TGG | - | chr3.2:81673715-81673734 | MS.gene013209:intron | 55.0% |
! | CTTGTGCCTCTGAAGGTGGA+AGG | - | chr3.2:81673719-81673738 | MS.gene013209:intron | 55.0% |
AGGAGCCCTTCCACCTTCAG+AGG | + | chr3.2:81673728-81673747 | None:intergenic | 60.0% | |
GGACCTCGAGCTTTCTACCG+AGG | - | chr3.2:81673787-81673806 | MS.gene013209:intron | 60.0% | |
GGGAGGGGAGGGAAATTGAG+GGG | + | chr3.2:81672156-81672175 | None:intergenic | 60.0% | |
GGGGAGGGGAGGGAAATTGA+GGG | + | chr3.2:81672157-81672176 | None:intergenic | 60.0% | |
! | ACGATCGAGAGGTGCAGTCG+CGG | + | chr3.2:81673398-81673417 | None:intergenic | 60.0% |
! | CTTTTAGCAGGTGGCGTGGC+TGG | - | chr3.2:81673640-81673659 | MS.gene013209:intron | 60.0% |
! | GAGGCTTTTAGCAGGTGGCG+TGG | - | chr3.2:81673636-81673655 | MS.gene013209:intron | 60.0% |
! | GCTGCTGGGAGGCTTTTAGC+AGG | - | chr3.2:81673628-81673647 | MS.gene013209:intron | 60.0% |
! | GCTGGGAGGCTTTTAGCAGG+TGG | - | chr3.2:81673631-81673650 | MS.gene013209:intron | 60.0% |
!! | CGGATATTGGTGCTGCTGGG+AGG | - | chr3.2:81673617-81673636 | MS.gene013209:intron | 60.0% |
GGGGGAGGGGAGGGAAATTG+AGG | + | chr3.2:81672158-81672177 | None:intergenic | 65.0% | |
TTAGCAGGTGGCGTGGCTGG+TGG | - | chr3.2:81673643-81673662 | MS.gene013209:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 81671348 | 81674449 | 81671348 | ID=MS.gene013209 |
chr3.2 | mRNA | 81671348 | 81674449 | 81671348 | ID=MS.gene013209.t1;Parent=MS.gene013209 |
chr3.2 | exon | 81674065 | 81674449 | 81674065 | ID=MS.gene013209.t1.exon1;Parent=MS.gene013209.t1 |
chr3.2 | CDS | 81674065 | 81674449 | 81674065 | ID=cds.MS.gene013209.t1;Parent=MS.gene013209.t1 |
chr3.2 | exon | 81671884 | 81672666 | 81671884 | ID=MS.gene013209.t1.exon2;Parent=MS.gene013209.t1 |
chr3.2 | CDS | 81671884 | 81672666 | 81671884 | ID=cds.MS.gene013209.t1;Parent=MS.gene013209.t1 |
chr3.2 | exon | 81671672 | 81671762 | 81671672 | ID=MS.gene013209.t1.exon3;Parent=MS.gene013209.t1 |
chr3.2 | CDS | 81671672 | 81671762 | 81671672 | ID=cds.MS.gene013209.t1;Parent=MS.gene013209.t1 |
chr3.2 | exon | 81671348 | 81671540 | 81671348 | ID=MS.gene013209.t1.exon4;Parent=MS.gene013209.t1 |
chr3.2 | CDS | 81671348 | 81671540 | 81671348 | ID=cds.MS.gene013209.t1;Parent=MS.gene013209.t1 |
Gene Sequence |
Protein sequence |