Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013451.t1 | XP_013461475.1 | 99.4 | 346 | 2 | 0 | 26 | 371 | 1 | 346 | 1.10E-189 | 672.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013451.t1 | A7RK30 | 40.5 | 336 | 182 | 7 | 28 | 360 | 41 | 361 | 4.1e-60 | 233.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013451.t1 | A0A072VBF3 | 99.4 | 346 | 2 | 0 | 26 | 371 | 1 | 346 | 7.8e-190 | 672.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013451 | MS.gene01763 | PPI |
| MS.gene002379 | MS.gene013451 | PPI |
| MS.gene013451 | MS.gene002381 | PPI |
| MS.gene01359 | MS.gene013451 | PPI |
| MS.gene013451 | MS.gene047518 | PPI |
| MS.gene013451 | MS.gene01357 | PPI |
| MS.gene01765 | MS.gene013451 | PPI |
| MS.gene047515 | MS.gene013451 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013451.t1 | MTR_3g093620 | 99.422 | 346 | 2 | 0 | 26 | 371 | 1 | 346 | 0.0 | 695 |
| MS.gene013451.t1 | MTR_2g012420 | 30.233 | 344 | 212 | 8 | 26 | 361 | 1 | 324 | 5.37e-34 | 128 |
| MS.gene013451.t1 | MTR_4g086410 | 31.190 | 311 | 183 | 9 | 69 | 363 | 328 | 623 | 7.78e-33 | 129 |
| MS.gene013451.t1 | MTR_4g050760 | 30.795 | 302 | 197 | 4 | 65 | 361 | 30 | 324 | 1.74e-31 | 121 |
| MS.gene013451.t1 | MTR_2g012380 | 30.795 | 302 | 197 | 4 | 65 | 361 | 30 | 324 | 1.74e-31 | 121 |
| MS.gene013451.t1 | MTR_4g086400 | 31.270 | 307 | 188 | 9 | 69 | 363 | 188 | 483 | 4.59e-31 | 123 |
| MS.gene013451.t1 | MTR_4g086400 | 31.270 | 307 | 188 | 9 | 69 | 363 | 328 | 623 | 1.11e-30 | 123 |
| MS.gene013451.t1 | MTR_4g029500 | 30.100 | 299 | 201 | 5 | 65 | 361 | 81 | 373 | 1.18e-28 | 115 |
| MS.gene013451.t1 | MTR_2g012380 | 32.927 | 246 | 153 | 4 | 65 | 305 | 30 | 268 | 1.31e-28 | 112 |
| MS.gene013451.t1 | MTR_8g064610 | 28.803 | 309 | 173 | 10 | 65 | 360 | 106 | 380 | 8.64e-24 | 101 |
| MS.gene013451.t1 | MTR_2g012420 | 28.745 | 247 | 172 | 2 | 116 | 361 | 10 | 253 | 5.58e-20 | 88.6 |
| MS.gene013451.t1 | MTR_4g050710 | 28.745 | 247 | 172 | 2 | 116 | 361 | 4 | 247 | 6.10e-20 | 88.6 |
| MS.gene013451.t1 | MTR_6g012170 | 28.213 | 319 | 179 | 11 | 55 | 360 | 35 | 316 | 5.66e-18 | 84.0 |
| MS.gene013451.t1 | MTR_6g012160 | 32.099 | 243 | 138 | 8 | 55 | 286 | 35 | 261 | 1.12e-17 | 83.2 |
| MS.gene013451.t1 | MTR_7g034395 | 29.012 | 324 | 176 | 11 | 53 | 360 | 28 | 313 | 3.79e-16 | 79.0 |
| MS.gene013451.t1 | MTR_7g406860 | 26.335 | 281 | 183 | 8 | 93 | 360 | 72 | 341 | 4.55e-16 | 79.0 |
| MS.gene013451.t1 | MTR_8g095220 | 25.301 | 249 | 168 | 8 | 117 | 360 | 187 | 422 | 2.32e-14 | 74.3 |
| MS.gene013451.t1 | MTR_2g012420 | 28.497 | 193 | 134 | 2 | 170 | 361 | 3 | 192 | 6.08e-14 | 70.1 |
| MS.gene013451.t1 | MTR_4g036310 | 33.149 | 181 | 107 | 5 | 55 | 225 | 29 | 205 | 9.17e-14 | 72.0 |
| MS.gene013451.t1 | MTR_2g095840 | 27.407 | 270 | 179 | 5 | 42 | 301 | 46 | 308 | 4.77e-13 | 70.1 |
| MS.gene013451.t1 | MTR_4g033205 | 30.601 | 183 | 109 | 6 | 55 | 225 | 29 | 205 | 4.01e-12 | 67.0 |
| MS.gene013451.t1 | MTR_4g032995 | 30.601 | 183 | 109 | 6 | 55 | 225 | 29 | 205 | 4.09e-12 | 67.0 |
| MS.gene013451.t1 | MTR_0001s0660 | 23.664 | 393 | 221 | 13 | 21 | 360 | 5 | 371 | 8.23e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013451.t1 | AT3G56460 | 77.101 | 345 | 78 | 1 | 26 | 369 | 1 | 345 | 0.0 | 523 |
| MS.gene013451.t1 | AT1G49670 | 31.546 | 317 | 184 | 10 | 69 | 368 | 328 | 628 | 3.11e-31 | 125 |
| MS.gene013451.t1 | AT1G49670 | 30.088 | 339 | 183 | 12 | 69 | 368 | 328 | 651 | 2.08e-29 | 120 |
| MS.gene013451.t1 | AT4G21580 | 29.866 | 298 | 203 | 4 | 65 | 360 | 30 | 323 | 2.21e-28 | 113 |
| MS.gene013451.t1 | AT5G61510 | 29.431 | 299 | 203 | 5 | 65 | 361 | 56 | 348 | 1.27e-25 | 106 |
| MS.gene013451.t1 | AT4G21580 | 29.195 | 298 | 199 | 5 | 65 | 360 | 30 | 317 | 2.59e-25 | 104 |
| MS.gene013451.t1 | AT5G61510 | 29.431 | 299 | 203 | 5 | 65 | 361 | 113 | 405 | 2.65e-25 | 106 |
| MS.gene013451.t1 | AT4G21580 | 28.328 | 293 | 206 | 2 | 69 | 360 | 1 | 290 | 7.23e-25 | 103 |
| MS.gene013451.t1 | AT1G23740 | 26.852 | 324 | 189 | 11 | 50 | 360 | 94 | 382 | 2.21e-23 | 100 |
| MS.gene013451.t1 | AT3G15090 | 27.353 | 340 | 199 | 13 | 50 | 362 | 48 | 366 | 2.05e-17 | 83.2 |
| MS.gene013451.t1 | AT3G45770 | 25.325 | 308 | 215 | 8 | 6 | 305 | 17 | 317 | 7.88e-14 | 72.4 |
| MS.gene013451.t1 | AT4G13010 | 35.359 | 181 | 105 | 6 | 55 | 225 | 27 | 205 | 9.43e-14 | 72.0 |
| MS.gene013451.t1 | AT5G63620 | 25.000 | 236 | 164 | 5 | 125 | 357 | 196 | 421 | 1.31e-12 | 68.9 |
| MS.gene013451.t1 | AT5G63620 | 25.000 | 236 | 164 | 5 | 125 | 357 | 196 | 421 | 3.01e-12 | 68.2 |
| MS.gene013451.t1 | AT3G45770 | 26.667 | 240 | 168 | 4 | 71 | 305 | 3 | 239 | 5.24e-12 | 66.2 |
Find 104 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGCGAACATTCTAATAAT+TGG | 0.169619 | 3.4:-85373797 | MS.gene013451:CDS |
| GCTAATTACTTGCAGATTCT+TGG | 0.190783 | 3.4:-85375540 | MS.gene013451:CDS |
| CTTAAGGTCAAAAGGCTTAA+AGG | 0.221379 | 3.4:-85373887 | MS.gene013451:CDS |
| GGACAGTACATGGACTTTAT+TGG | 0.229971 | 3.4:-85372051 | MS.gene013451:CDS |
| GACAGTACATGGACTTTATT+GGG | 0.241684 | 3.4:-85372050 | MS.gene013451:CDS |
| GTTTGTTCCTTTGCTGCTCT+TGG | 0.265097 | 3.4:-85375411 | MS.gene013451:CDS |
| GGAGCACTTGCTGTGGCATT+TGG | 0.265900 | 3.4:-85374763 | MS.gene013451:CDS |
| TTCATGAGCTTGCCTCCTAC+TGG | 0.267191 | 3.4:+85373845 | None:intergenic |
| AGGATCCCCAACACGGAAAT+TGG | 0.273023 | 3.4:+85375434 | None:intergenic |
| TGATTCTTGGATATGATTAT+TGG | 0.274610 | 3.4:+85375630 | None:intergenic |
| TTTGTAGGTATTGCTAGTTT+TGG | 0.301867 | 3.4:-85374601 | MS.gene013451:intron |
| TTGAGGGATTGGGTGATTCT+TGG | 0.308834 | 3.4:+85375617 | None:intergenic |
| GATTCTTGGATATGATTATT+GGG | 0.311570 | 3.4:+85375631 | None:intergenic |
| TGTTGATCATGTGGTGGACT+TGG | 0.319846 | 3.4:-85373945 | MS.gene013451:CDS |
| AATCTTTGCGGCTTCTGAAA+TGG | 0.328075 | 3.4:-85373820 | MS.gene013451:CDS |
| TTAAGGTCAAAAGGCTTAAA+GGG | 0.333113 | 3.4:-85373886 | MS.gene013451:CDS |
| CTCCTACATCGGTTAGAGTT+AGG | 0.333628 | 3.4:-85375587 | MS.gene013451:CDS |
| GAACAAAACGTGCGTTGAAA+TGG | 0.339912 | 3.4:-85375712 | MS.gene013451:CDS |
| ATCTTTGCGGCTTCTGAAAT+GGG | 0.343716 | 3.4:-85373819 | MS.gene013451:CDS |
| ATGTTACCAATTTCCGTGTT+GGG | 0.350600 | 3.4:-85375440 | MS.gene013451:CDS |
| GGTTGTGATTTGGTTGCTGC+TGG | 0.359205 | 3.4:-85374784 | MS.gene013451:CDS |
| CGTCTTCAACGCTCACCGTT+GGG | 0.366387 | 3.4:+85375661 | None:intergenic |
| TTCCTTACCTTATATGGTTG+TGG | 0.368077 | 3.4:-85375781 | None:intergenic |
| ATCAGAGATAGGAAAGCTAT+AGG | 0.384250 | 3.4:-85371171 | MS.gene013451:CDS |
| GAGCGAACATTCTAATAATT+GGG | 0.396914 | 3.4:-85373796 | MS.gene013451:CDS |
| GGTCTTGCAGCTGTGCAAAT+TGG | 0.397069 | 3.4:-85374561 | MS.gene013451:CDS |
| GAATCACCCAATCCCTCAAT+TGG | 0.407761 | 3.4:-85375613 | MS.gene013451:CDS |
| CCTTCACTGCCATCAGAGAT+AGG | 0.409182 | 3.4:-85371182 | MS.gene013451:CDS |
| GGAGAATCCAATTGAGGGAT+TGG | 0.416502 | 3.4:+85375606 | None:intergenic |
| CATAGAGCTCAGTTGAAATC+TGG | 0.418835 | 3.4:-85374718 | MS.gene013451:CDS |
| CGTGCCGGAGGGTTGTGATT+TGG | 0.423686 | 3.4:-85374794 | MS.gene013451:CDS |
| GTTCACATTTCTCATTCTTA+CGG | 0.428188 | 3.4:-85371944 | MS.gene013451:CDS |
| AATTTGAAGGTTTCGCGTGC+CGG | 0.428781 | 3.4:-85374809 | MS.gene013451:intron |
| AGAGAATCTTCAAGAACAGC+TGG | 0.435112 | 3.4:+85372007 | None:intergenic |
| TCGTCTTCAACGCTCACCGT+TGG | 0.443222 | 3.4:+85375660 | None:intergenic |
| TCAATTGGATTCTCCTACAT+CGG | 0.456528 | 3.4:-85375598 | MS.gene013451:CDS |
| TTGGGTGCAGCAGGAGGTGT+GGG | 0.460493 | 3.4:-85374582 | MS.gene013451:CDS |
| AAGAGTTCCTTAAGGTCAAA+AGG | 0.464102 | 3.4:-85373895 | MS.gene013451:CDS |
| TCAGGCATCGTTGATTCCGT+TGG | 0.466758 | 3.4:-85375468 | MS.gene013451:CDS |
| GGTGCAGCTCTTGAAATCAA+TGG | 0.469140 | 3.4:-85373969 | MS.gene013451:CDS |
| CTACTGTCTTGGTTGGCAAA+AGG | 0.470601 | 3.4:-85371977 | MS.gene013451:CDS |
| TCAGAGATAGGAAAGCTATA+GGG | 0.473276 | 3.4:-85371170 | MS.gene013451:CDS |
| TTAACAAGAGCTATGTTAGC+AGG | 0.478741 | 3.4:+85373746 | None:intergenic |
| TCATGAGCTTGCCTCCTACT+GGG | 0.478839 | 3.4:+85373846 | None:intergenic |
| GCTATGTTAGCAGGGATGAC+AGG | 0.479328 | 3.4:+85373755 | None:intergenic |
| GTGCAGCTCTTGAAATCAAT+GGG | 0.486437 | 3.4:-85373968 | MS.gene013451:CDS |
| AGCTCAGTTGAAATCTGGTC+AGG | 0.487489 | 3.4:-85374713 | MS.gene013451:intron |
| CTAATAATTGGGTTTGCTAG+TGG | 0.490521 | 3.4:-85373785 | MS.gene013451:CDS |
| TGCCTCCTACTGGGTCATAC+AGG | 0.492735 | 3.4:+85373855 | None:intergenic |
| TGCTAACATAGCTCTTGTTA+AGG | 0.494266 | 3.4:-85373744 | MS.gene013451:intron |
| GATGGCAGTGAAGGCGAGGT+TGG | 0.495840 | 3.4:+85371191 | None:intergenic |
| CTCTCAAGGAGCTACTGTCT+TGG | 0.497731 | 3.4:-85371988 | MS.gene013451:CDS |
| GTTTCATTACATAACAGAAT+CGG | 0.505113 | 3.4:-85375742 | MS.gene013451:CDS |
| GCATTTGGCACTTCACATGT+TGG | 0.508528 | 3.4:-85374748 | MS.gene013451:CDS |
| TGCTGCTGGAGCACTTGCTG+TGG | 0.510040 | 3.4:-85374770 | MS.gene013451:CDS |
| AAATCGGATCCAGGAATGAA+TGG | 0.510104 | 3.4:+85375492 | None:intergenic |
| AATGTTACCAATTTCCGTGT+TGG | 0.511111 | 3.4:-85375441 | MS.gene013451:CDS |
| GTTGATCATGTGGTGGACTT+GGG | 0.511415 | 3.4:-85373944 | MS.gene013451:CDS |
| TTTGGGTGCAGCAGGAGGTG+TGG | 0.512176 | 3.4:-85374583 | MS.gene013451:CDS |
| AGAGCAGCAAAGGAACAAAC+AGG | 0.514377 | 3.4:+85375414 | None:intergenic |
| CTATTGTCATTGCTGTTGCT+AGG | 0.516037 | 3.4:-85374524 | MS.gene013451:intron |
| ATCCAGGAATGAATGGCAAA+GGG | 0.516185 | 3.4:+85375499 | None:intergenic |
| TTGAAGGTTTCGCGTGCCGG+AGG | 0.517340 | 3.4:-85374806 | MS.gene013451:intron |
| GAGAATCCAATTGAGGGATT+GGG | 0.524650 | 3.4:+85375607 | None:intergenic |
| AACACGGAAATTGGTAACAT+TGG | 0.526095 | 3.4:+85375443 | None:intergenic |
| TGGCAGAATTGGACAGTACA+TGG | 0.526179 | 3.4:-85372061 | MS.gene013451:intron |
| TGAAGGTTTCGCGTGCCGGA+GGG | 0.526484 | 3.4:-85374805 | MS.gene013451:intron |
| TATAGCTTTCCTATCTCTGA+TGG | 0.527406 | 3.4:+85371173 | None:intergenic |
| TGTTACCAATTTCCGTGTTG+GGG | 0.536179 | 3.4:-85375439 | MS.gene013451:CDS |
| ATCCTAACTCTAACCGATGT+AGG | 0.537658 | 3.4:+85375585 | None:intergenic |
| ATGTAGGAGAATCCAATTGA+GGG | 0.540400 | 3.4:+85375601 | None:intergenic |
| AGCTCATGAAAGAATCTTTG+CGG | 0.548659 | 3.4:-85373832 | MS.gene013451:CDS |
| ATTAGCGAAATTCAAGCTTG+TGG | 0.550287 | 3.4:+85375557 | None:intergenic |
| ATAAGATCCAAGAGCAGCAA+AGG | 0.551039 | 3.4:+85375404 | None:intergenic |
| CCTATCTCTGATGGCAGTGA+AGG | 0.555242 | 3.4:+85371182 | None:intergenic |
| CTCTGATGGCAGTGAAGGCG+AGG | 0.567574 | 3.4:+85371187 | None:intergenic |
| CAAGGAGCTACTGTCTTGGT+TGG | 0.572684 | 3.4:-85371984 | MS.gene013451:CDS |
| TGTTCTTGAAGATTCTCTCA+AGG | 0.573910 | 3.4:-85372002 | MS.gene013451:CDS |
| ATTGGTAACATTGGAACCAA+CGG | 0.576019 | 3.4:+85375452 | None:intergenic |
| CCAGGAATGAATGGCAAAGG+GGG | 0.576042 | 3.4:+85375501 | None:intergenic |
| GAGTGTGAAAGAGTTCCTTA+AGG | 0.578196 | 3.4:-85373903 | MS.gene013451:CDS |
| GATCCAGGAATGAATGGCAA+AGG | 0.580454 | 3.4:+85375498 | None:intergenic |
| TGCAAATTGGAAAAGCATGT+GGG | 0.585981 | 3.4:-85374548 | MS.gene013451:CDS |
| TCATTCTTACGGCCTGTCAG+AGG | 0.586401 | 3.4:-85371933 | MS.gene013451:intron |
| GCAGATTCTTGGAAAATACC+AGG | 0.591611 | 3.4:-85375529 | MS.gene013451:CDS |
| TCTTTGCGGCTTCTGAAATG+GGG | 0.609441 | 3.4:-85373818 | MS.gene013451:CDS |
| TAACAAGAGCTATGTTAGCA+GGG | 0.614061 | 3.4:+85373747 | None:intergenic |
| GCAACCAAATCACAACCCTC+CGG | 0.621624 | 3.4:+85374790 | None:intergenic |
| CAGAAAATTGGGTGACCCAA+CGG | 0.628219 | 3.4:-85375676 | MS.gene013451:CDS |
| ATCAATGGGTGTTGATCATG+TGG | 0.629567 | 3.4:-85373954 | MS.gene013451:CDS |
| AACAAACAGGATCCCCAACA+CGG | 0.633492 | 3.4:+85375427 | None:intergenic |
| GATGTAGGAGAATCCAATTG+AGG | 0.636037 | 3.4:+85375600 | None:intergenic |
| AGATAGGAAAGCTATAGGGA+AGG | 0.636916 | 3.4:-85371166 | MS.gene013451:CDS |
| GTCCTGTATGACCCAGTAGG+AGG | 0.637191 | 3.4:-85373857 | MS.gene013451:CDS |
| GTGCAAATTGGAAAAGCATG+TGG | 0.641885 | 3.4:-85374549 | MS.gene013451:CDS |
| GATGTCCTGTATGACCCAGT+AGG | 0.653197 | 3.4:-85373860 | MS.gene013451:CDS |
| GAGAATCTTCAAGAACAGCT+GGG | 0.655056 | 3.4:+85372008 | None:intergenic |
| TCCAGGAATGAATGGCAAAG+GGG | 0.677910 | 3.4:+85375500 | None:intergenic |
| AATGGGTGTTGATCATGTGG+TGG | 0.686665 | 3.4:-85373951 | MS.gene013451:CDS |
| ACAGTACATGGACTTTATTG+GGG | 0.692527 | 3.4:-85372049 | MS.gene013451:CDS |
| GTAAGAATGAGAAATGTGAA+CGG | 0.692858 | 3.4:+85371946 | None:intergenic |
| TATGTAATGAAACTGTGCAA+CGG | 0.714820 | 3.4:+85375752 | None:intergenic |
| GCAAATTGGAAAAGCATGTG+GGG | 0.732786 | 3.4:-85374547 | MS.gene013451:CDS |
| AATCTTCAAGAACAGCTGGG+CGG | 0.762499 | 3.4:+85372011 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAAAATTTTATTTCGTT+AGG | - | chr3.4:85372022-85372041 | MS.gene013451:CDS | 10.0% |
| !!! | TTACTAAATCTTTTTTTTTT+GGG | - | chr3.4:85375135-85375154 | MS.gene013451:intron | 10.0% |
| !!! | TTTACTAAATCTTTTTTTTT+TGG | - | chr3.4:85375134-85375153 | MS.gene013451:intron | 10.0% |
| !! | AAATACACAAATTATTAGAA+CGG | + | chr3.4:85375004-85375023 | None:intergenic | 15.0% |
| !! | TATTTGGTATATAATGAAAA+AGG | - | chr3.4:85374157-85374176 | MS.gene013451:intron | 15.0% |
| !! | TTATGTATGTAGTTTAAATT+AGG | + | chr3.4:85374421-85374440 | None:intergenic | 15.0% |
| !!! | AAATATTTTATGGATTATGT+TGG | - | chr3.4:85375463-85375482 | MS.gene013451:CDS | 15.0% |
| !!! | AATTTTGGTGAAATATTTTA+TGG | - | chr3.4:85375453-85375472 | MS.gene013451:CDS | 15.0% |
| !!! | ATAATCAATTTGGAATTAAT+TGG | - | chr3.4:85373306-85373325 | MS.gene013451:intron | 15.0% |
| !!! | TAAAATTTTAAATACTCGTT+TGG | + | chr3.4:85372015-85372034 | None:intergenic | 15.0% |
| !!! | TAAAGTTATAGTTGTTTTAT+GGG | - | chr3.4:85372648-85372667 | MS.gene013451:intron | 15.0% |
| !!! | TAATCAATTTGGAATTAATT+GGG | - | chr3.4:85373307-85373326 | MS.gene013451:intron | 15.0% |
| !! | AAACAGAACAATATATACAT+TGG | + | chr3.4:85372239-85372258 | None:intergenic | 20.0% |
| !! | AAATAAATGCACAAATTGTA+TGG | + | chr3.4:85373515-85373534 | None:intergenic | 20.0% |
| !! | AAATAGATATGTACTAAACA+TGG | - | chr3.4:85373759-85373778 | MS.gene013451:CDS | 20.0% |
| !! | AATAAATGCACAAATTGTAT+GGG | + | chr3.4:85373514-85373533 | None:intergenic | 20.0% |
| !! | AATTTGATATACTGTATACT+TGG | - | chr3.4:85375521-85375540 | MS.gene013451:CDS | 20.0% |
| !! | ACAAAAAATGACAATATGAA+TGG | - | chr3.4:85373682-85373701 | MS.gene013451:intron | 20.0% |
| !! | ACATTCTATGATAATCAATT+TGG | - | chr3.4:85373296-85373315 | MS.gene013451:intron | 20.0% |
| !! | ATATAAAATGTCATATACGA+TGG | - | chr3.4:85371821-85371840 | MS.gene013451:intron | 20.0% |
| !! | ATTTGATATACTGTATACTT+GGG | - | chr3.4:85375522-85375541 | MS.gene013451:CDS | 20.0% |
| !! | CAAAAAATGACAATATGAAT+GGG | - | chr3.4:85373683-85373702 | MS.gene013451:intron | 20.0% |
| !! | TAAAATTCAATGTACATTCA+AGG | - | chr3.4:85375036-85375055 | MS.gene013451:intron | 20.0% |
| !! | TAGAATATATATCACAACTT+TGG | + | chr3.4:85374121-85374140 | None:intergenic | 20.0% |
| !! | TCATTATATACCAAATATGT+AGG | + | chr3.4:85374154-85374173 | None:intergenic | 20.0% |
| !! | TCCCATATAAATAAAAGAAA+AGG | - | chr3.4:85374360-85374379 | MS.gene013451:intron | 20.0% |
| !! | TGTAAATTCTTTGAATTTGA+AGG | - | chr3.4:85372068-85372087 | MS.gene013451:intron | 20.0% |
| !! | TTAATGTAAATATGCAATGT+GGG | + | chr3.4:85374564-85374583 | None:intergenic | 20.0% |
| !!! | AGATTGATTTTTGTATGTTT+GGG | + | chr3.4:85371954-85371973 | None:intergenic | 20.0% |
| !!! | AGTGATTTTAACAAACAAAA+AGG | + | chr3.4:85374808-85374827 | None:intergenic | 20.0% |
| !!! | CTCATTAGTTTTTGAAATTT+TGG | - | chr3.4:85375438-85375457 | MS.gene013451:CDS | 20.0% |
| !!! | GCCTTTTCTTTTATTTATAT+GGG | + | chr3.4:85374364-85374383 | None:intergenic | 20.0% |
| !!! | GTAAAGTTATAGTTGTTTTA+TGG | - | chr3.4:85372647-85372666 | MS.gene013451:intron | 20.0% |
| !!! | TTTGTTTGTTAAAATCACTA+TGG | - | chr3.4:85374809-85374828 | MS.gene013451:intron | 20.0% |
| ! | AAACAATTTCTTATTGTTGC+AGG | - | chr3.4:85375676-85375695 | MS.gene013451:CDS | 25.0% |
| ! | AAGAAACATATTGAATACCT+AGG | - | chr3.4:85374262-85374281 | MS.gene013451:intron | 25.0% |
| ! | AAGACTACATTAGACAATAA+AGG | - | chr3.4:85374220-85374239 | MS.gene013451:intron | 25.0% |
| ! | AATAGTTTCAACTCTCAAAA+AGG | + | chr3.4:85375584-85375603 | None:intergenic | 25.0% |
| ! | AGACATATTCACGTAAAAAT+GGG | - | chr3.4:85371679-85371698 | MS.gene013451:intron | 25.0% |
| ! | AGATACATAGCATAAAGTAA+CGG | + | chr3.4:85374004-85374023 | None:intergenic | 25.0% |
| ! | ATCAATGCTGAAAAATATAC+AGG | - | chr3.4:85373644-85373663 | MS.gene013451:intron | 25.0% |
| ! | CAAAAACTAATGAGAATAGA+AGG | + | chr3.4:85375432-85375451 | None:intergenic | 25.0% |
| ! | CTTAATGTAAATATGCAATG+TGG | + | chr3.4:85374565-85374584 | None:intergenic | 25.0% |
| ! | GATTCTTGGATATGATTATT+GGG | + | chr3.4:85371262-85371281 | None:intergenic | 25.0% |
| ! | GTATATATTGTTCTGTTTGT+TGG | - | chr3.4:85372241-85372260 | MS.gene013451:intron | 25.0% |
| ! | GTTTCATTACATAACAGAAT+CGG | - | chr3.4:85371148-85371167 | MS.gene013451:CDS | 25.0% |
| ! | TAGACATATTCACGTAAAAA+TGG | - | chr3.4:85371678-85371697 | MS.gene013451:intron | 25.0% |
| ! | TCAATGCTGAAAAATATACA+GGG | - | chr3.4:85373645-85373664 | MS.gene013451:intron | 25.0% |
| ! | TGATTCTTGGATATGATTAT+TGG | + | chr3.4:85371263-85371282 | None:intergenic | 25.0% |
| ! | TTAAAATTAGTGAGTGGTTA+GGG | - | chr3.4:85375268-85375287 | MS.gene013451:intron | 25.0% |
| ! | TTTACATTAAGAGAAATGCT+AGG | - | chr3.4:85374574-85374593 | MS.gene013451:CDS | 25.0% |
| !! | AATTTGGAATTAATTGGGAA+GGG | - | chr3.4:85373312-85373331 | MS.gene013451:intron | 25.0% |
| !! | AGTTCAATGTTCATTTTCTT+GGG | - | chr3.4:85375229-85375248 | MS.gene013451:intron | 25.0% |
| !! | GCTTAGCTAAAATGAATTTT+GGG | - | chr3.4:85372602-85372621 | MS.gene013451:intron | 25.0% |
| !! | TAGTTCAATGTTCATTTTCT+TGG | - | chr3.4:85375228-85375247 | MS.gene013451:intron | 25.0% |
| !! | TGTAACTGATGACATTATTT+TGG | + | chr3.4:85373467-85373486 | None:intergenic | 25.0% |
| !! | TTGTAGCTTCTTAATTTTCA+CGG | - | chr3.4:85372531-85372550 | MS.gene013451:intron | 25.0% |
| !!! | AAATTAGGTTCTAAGAATCA+AGG | + | chr3.4:85374406-85374425 | None:intergenic | 25.0% |
| !!! | ACTTTTGTTTAAATACACAC+AGG | - | chr3.4:85372737-85372756 | MS.gene013451:intron | 25.0% |
| !!! | AGTTTTTTCAAGGTTAGTTA+GGG | + | chr3.4:85373889-85373908 | None:intergenic | 25.0% |
| !!! | CGTAAAAATGGGTTAAATAA+TGG | - | chr3.4:85371690-85371709 | MS.gene013451:intron | 25.0% |
| !!! | GAGATTGATTTTTGTATGTT+TGG | + | chr3.4:85371955-85371974 | None:intergenic | 25.0% |
| !!! | GGCCTTTTCTTTTATTTATA+TGG | + | chr3.4:85374365-85374384 | None:intergenic | 25.0% |
| !!! | TAGTTTTTTCAAGGTTAGTT+AGG | + | chr3.4:85373890-85373909 | None:intergenic | 25.0% |
| AAACATATTGAATACCTAGG+TGG | - | chr3.4:85374265-85374284 | MS.gene013451:intron | 30.0% | |
| AAATCGCTACAATACTCTAA+TGG | - | chr3.4:85374455-85374474 | MS.gene013451:intron | 30.0% | |
| AACTAAACTAGTGAGATCTT+TGG | - | chr3.4:85374500-85374519 | MS.gene013451:intron | 30.0% | |
| AATATGTTTCTTAGATGTCG+TGG | + | chr3.4:85374254-85374273 | None:intergenic | 30.0% | |
| ACCAAATGACATCAAAATGT+TGG | + | chr3.4:85371734-85371753 | None:intergenic | 30.0% | |
| CAAACACACACTAAATAAAC+GGG | + | chr3.4:85371566-85371585 | None:intergenic | 30.0% | |
| CCAAACACACACTAAATAAA+CGG | + | chr3.4:85371567-85371586 | None:intergenic | 30.0% | |
| CTACTGTTGTAACTCTTTAA+AGG | - | chr3.4:85375087-85375106 | MS.gene013451:intron | 30.0% | |
| GAGCGAACATTCTAATAATT+GGG | - | chr3.4:85373094-85373113 | MS.gene013451:intron | 30.0% | |
| GCAAATCAACAATGACTAAA+AGG | + | chr3.4:85373549-85373568 | None:intergenic | 30.0% | |
| GTAAGAATGAGAAATGTGAA+CGG | + | chr3.4:85374947-85374966 | None:intergenic | 30.0% | |
| GTTAAAATTAGTGAGTGGTT+AGG | - | chr3.4:85375267-85375286 | MS.gene013451:intron | 30.0% | |
| GTTCACATTTCTCATTCTTA+CGG | - | chr3.4:85374946-85374965 | MS.gene013451:intron | 30.0% | |
| TAAAATCACTATGGCAGAAT+TGG | - | chr3.4:85374818-85374837 | MS.gene013451:intron | 30.0% | |
| TATAGCAGAACTAACATAAG+AGG | + | chr3.4:85374759-85374778 | None:intergenic | 30.0% | |
| TATGTAATGAAACTGTGCAA+CGG | + | chr3.4:85371141-85371160 | None:intergenic | 30.0% | |
| TATTAGAACGGATAAGACAA+GGG | + | chr3.4:85374992-85375011 | None:intergenic | 30.0% | |
| TCATATTTACTAATGCCCAT+TGG | + | chr3.4:85375395-85375414 | None:intergenic | 30.0% | |
| TCATGAGAAATTGTCATATG+TGG | + | chr3.4:85373349-85373368 | None:intergenic | 30.0% | |
| TCTAACACTCATTCTCTTAT+TGG | + | chr3.4:85374704-85374723 | None:intergenic | 30.0% | |
| TGTTATTATCTTGTCTTGCT+TGG | - | chr3.4:85373194-85373213 | MS.gene013451:intron | 30.0% | |
| TTAAGGTCAAAAGGCTTAAA+GGG | - | chr3.4:85373004-85373023 | MS.gene013451:intron | 30.0% | |
| TTATTAGAACGGATAAGACA+AGG | + | chr3.4:85374993-85375012 | None:intergenic | 30.0% | |
| TTATTGGATGAAATCCATGT+AGG | + | chr3.4:85374688-85374707 | None:intergenic | 30.0% | |
| TTGTAGCGATTTAATCACAA+TGG | + | chr3.4:85374447-85374466 | None:intergenic | 30.0% | |
| TTTCAGCTTCACTATCTAAA+AGG | + | chr3.4:85373963-85373982 | None:intergenic | 30.0% | |
| ! | AAAGATCTCACTAGTTTAGT+TGG | + | chr3.4:85374501-85374520 | None:intergenic | 30.0% |
| ! | AAGATCTCACTAGTTTAGTT+GGG | + | chr3.4:85374500-85374519 | None:intergenic | 30.0% |
| ! | ATATTGTTCTGTTTGTTGGT+GGG | - | chr3.4:85372245-85372264 | MS.gene013451:intron | 30.0% |
| ! | CAATTTGGAATTAATTGGGA+AGG | - | chr3.4:85373311-85373330 | MS.gene013451:intron | 30.0% |
| ! | CATATACGATGGATGTATTT+TGG | - | chr3.4:85371832-85371851 | MS.gene013451:intron | 30.0% |
| ! | CGCTTAGCTAAAATGAATTT+TGG | - | chr3.4:85372601-85372620 | MS.gene013451:intron | 30.0% |
| ! | GTTCAATGTTCATTTTCTTG+GGG | - | chr3.4:85375230-85375249 | MS.gene013451:intron | 30.0% |
| ! | TATATTGTTCTGTTTGTTGG+TGG | - | chr3.4:85372244-85372263 | MS.gene013451:intron | 30.0% |
| ! | TCCTTCCAAATGTGATTTTT+AGG | + | chr3.4:85371893-85371912 | None:intergenic | 30.0% |
| ! | TGGGTTAAATAATGGAGAAA+TGG | - | chr3.4:85371698-85371717 | MS.gene013451:intron | 30.0% |
| ! | TGTTTCTTGTTTGCATAATC+TGG | - | chr3.4:85372880-85372899 | MS.gene013451:intron | 30.0% |
| !! | AAGTCTTTAGAATCACTTCT+GGG | - | chr3.4:85371975-85371994 | MS.gene013451:CDS | 30.0% |
| !! | ACCAACATTTTGATGTCATT+TGG | - | chr3.4:85371730-85371749 | MS.gene013451:intron | 30.0% |
| !! | GGATTTTACATTGCTTTTCA+GGG | + | chr3.4:85374343-85374362 | None:intergenic | 30.0% |
| !! | TCGCATTTTAATCTCTAACT+TGG | - | chr3.4:85372832-85372851 | MS.gene013451:intron | 30.0% |
| !! | TTAGTGCTGACTTAAGTAAT+AGG | - | chr3.4:85375191-85375210 | MS.gene013451:intron | 30.0% |
| !! | TTTGTAGGTATTGCTAGTTT+TGG | - | chr3.4:85372289-85372308 | MS.gene013451:intron | 30.0% |
| !!! | GATGACATTATTTTGGAAGT+GGG | + | chr3.4:85373460-85373479 | None:intergenic | 30.0% |
| !!! | GTTTGCATAATCTGGTTTTA+GGG | - | chr3.4:85372888-85372907 | MS.gene013451:intron | 30.0% |
| !!! | TGATGACATTATTTTGGAAG+TGG | + | chr3.4:85373461-85373480 | None:intergenic | 30.0% |
| !!! | TGTTTGCATAATCTGGTTTT+AGG | - | chr3.4:85372887-85372906 | MS.gene013451:intron | 30.0% |
| !!! | TTGTAGGTATTGCTAGTTTT+GGG | - | chr3.4:85372290-85372309 | MS.gene013451:intron | 30.0% |
| !!! | TTTGCATAATCTGGTTTTAG+GGG | - | chr3.4:85372889-85372908 | MS.gene013451:intron | 30.0% |
| AAAATGGATCCCACATAAAG+TGG | + | chr3.4:85374653-85374672 | None:intergenic | 35.0% | |
| AAATATGCAATGTGGGCAAA+AGG | + | chr3.4:85374557-85374576 | None:intergenic | 35.0% | |
| AAATCTAGCAAACTGTGAAG+CGG | + | chr3.4:85373860-85373879 | None:intergenic | 35.0% | |
| AACATAGACTAAGAAGCTCA+TGG | + | chr3.4:85372470-85372489 | None:intergenic | 35.0% | |
| AAGAGTTCCTTAAGGTCAAA+AGG | - | chr3.4:85372995-85373014 | MS.gene013451:intron | 35.0% | |
| AATATGCAATGTGGGCAAAA+GGG | + | chr3.4:85374556-85374575 | None:intergenic | 35.0% | |
| AATGTTACCAATTTCCGTGT+TGG | - | chr3.4:85371449-85371468 | MS.gene013451:intron | 35.0% | |
| ACAGTACATGGACTTTATTG+GGG | - | chr3.4:85374841-85374860 | MS.gene013451:intron | 35.0% | |
| ACATAGACTAAGAAGCTCAT+GGG | + | chr3.4:85372469-85372488 | None:intergenic | 35.0% | |
| ACATGTTGCATAATACATGC+AGG | + | chr3.4:85373917-85373936 | None:intergenic | 35.0% | |
| ACTAAGAAACAACTGACCTA+TGG | - | chr3.4:85374088-85374107 | MS.gene013451:intron | 35.0% | |
| ACTTGGGTCATTATAACAGT+TGG | - | chr3.4:85375538-85375557 | MS.gene013451:CDS | 35.0% | |
| AGATCAAGCAACAAACAATC+AGG | + | chr3.4:85373238-85373257 | None:intergenic | 35.0% | |
| AGCTCATGAAAGAATCTTTG+CGG | - | chr3.4:85373058-85373077 | MS.gene013451:intron | 35.0% | |
| AGGATTTAGTCATATGTACG+TGG | + | chr3.4:85374386-85374405 | None:intergenic | 35.0% | |
| AGTAACGGTAGTATTTAAGC+AGG | + | chr3.4:85373989-85374008 | None:intergenic | 35.0% | |
| ATCAACGATGCCTGAAAAAT+CGG | + | chr3.4:85371417-85371436 | None:intergenic | 35.0% | |
| ATCAGAGATAGGAAAGCTAT+AGG | - | chr3.4:85375719-85375738 | MS.gene013451:CDS | 35.0% | |
| ATGTAGGAGAATCCAATTGA+GGG | + | chr3.4:85371292-85371311 | None:intergenic | 35.0% | |
| ATGTTACCAATTTCCGTGTT+GGG | - | chr3.4:85371450-85371469 | MS.gene013451:intron | 35.0% | |
| ATTAGCGAAATTCAAGCTTG+TGG | + | chr3.4:85371336-85371355 | None:intergenic | 35.0% | |
| ATTGGCAAACAACAAGTGAA+GGG | + | chr3.4:85372221-85372240 | None:intergenic | 35.0% | |
| CAAAAGCAACAGTCATGATA+TGG | + | chr3.4:85373414-85373433 | None:intergenic | 35.0% | |
| CCGTTTATTTAGTGTGTGTT+TGG | - | chr3.4:85371564-85371583 | MS.gene013451:intron | 35.0% | |
| CTAAGAAACAACTGACCTAT+GGG | - | chr3.4:85374089-85374108 | MS.gene013451:intron | 35.0% | |
| CTTAAGGTCAAAAGGCTTAA+AGG | - | chr3.4:85373003-85373022 | MS.gene013451:intron | 35.0% | |
| GACAGTACATGGACTTTATT+GGG | - | chr3.4:85374840-85374859 | MS.gene013451:intron | 35.0% | |
| GCCTAAAAATCACATTTGGA+AGG | - | chr3.4:85371889-85371908 | MS.gene013451:intron | 35.0% | |
| GCTAATTACTTGCAGATTCT+TGG | - | chr3.4:85371350-85371369 | MS.gene013451:intron | 35.0% | |
| GGAGCGAACATTCTAATAAT+TGG | - | chr3.4:85373093-85373112 | MS.gene013451:intron | 35.0% | |
| GGATAAATCAGCATGTTTAC+TGG | - | chr3.4:85375156-85375175 | MS.gene013451:intron | 35.0% | |
| GTGAGCCTAAAAATCACATT+TGG | - | chr3.4:85371885-85371904 | MS.gene013451:intron | 35.0% | |
| TAACAAGAGCTATGTTAGCA+GGG | + | chr3.4:85373146-85373165 | None:intergenic | 35.0% | |
| TAGGTCTCACACTTAGAAAA+TGG | + | chr3.4:85374669-85374688 | None:intergenic | 35.0% | |
| TAGTCCTCATTGAACATCAA+TGG | + | chr3.4:85375639-85375658 | None:intergenic | 35.0% | |
| TATAGCTTTCCTATCTCTGA+TGG | + | chr3.4:85375720-85375739 | None:intergenic | 35.0% | |
| TCAATTGGATTCTCCTACAT+CGG | - | chr3.4:85371292-85371311 | MS.gene013451:intron | 35.0% | |
| TCAGAGATAGGAAAGCTATA+GGG | - | chr3.4:85375720-85375739 | MS.gene013451:CDS | 35.0% | |
| TCTACACACACCTACATATT+TGG | - | chr3.4:85374141-85374160 | MS.gene013451:intron | 35.0% | |
| TCTTAGCATATTAAACACCC+TGG | + | chr3.4:85373575-85373594 | None:intergenic | 35.0% | |
| TCTTAGTGATGAGATAGAGA+AGG | + | chr3.4:85374075-85374094 | None:intergenic | 35.0% | |
| TGAACATCAATGGAGCATAT+AGG | + | chr3.4:85375629-85375648 | None:intergenic | 35.0% | |
| TGCTAACATAGCTCTTGTTA+AGG | - | chr3.4:85373146-85373165 | MS.gene013451:intron | 35.0% | |
| TGTTCTTGAAGATTCTCTCA+AGG | - | chr3.4:85374888-85374907 | MS.gene013451:intron | 35.0% | |
| TTAACAAGAGCTATGTTAGC+AGG | + | chr3.4:85373147-85373166 | None:intergenic | 35.0% | |
| TTATTGAGTGAATCCCATGT+GGG | - | chr3.4:85374622-85374641 | MS.gene013451:intron | 35.0% | |
| TTGTGACATCAATGACCAAT+GGG | - | chr3.4:85375377-85375396 | MS.gene013451:CDS | 35.0% | |
| TTTGTGACATCAATGACCAA+TGG | - | chr3.4:85375376-85375395 | MS.gene013451:CDS | 35.0% | |
| ! | AACACGGAAATTGGTAACAT+TGG | + | chr3.4:85371450-85371469 | None:intergenic | 35.0% |
| ! | AGCACTTTTGTGCAGAAAAT+TGG | - | chr3.4:85371202-85371221 | MS.gene013451:intron | 35.0% |
| ! | ATTGGTAACATTGGAACCAA+CGG | + | chr3.4:85371441-85371460 | None:intergenic | 35.0% |
| ! | CATCATACTGGCATTTTGTT+TGG | + | chr3.4:85374048-85374067 | None:intergenic | 35.0% |
| ! | CATTTTCTTGGGGTTCTATT+TGG | - | chr3.4:85375240-85375259 | MS.gene013451:intron | 35.0% |
| ! | CTTTAAGCCTTTTGACCTTA+AGG | + | chr3.4:85373005-85373024 | None:intergenic | 35.0% |
| ! | GCACTTTTGTGCAGAAAATT+GGG | - | chr3.4:85371203-85371222 | MS.gene013451:intron | 35.0% |
| ! | GGTACATCAGGAATAGATTT+TGG | - | chr3.4:85373167-85373186 | MS.gene013451:intron | 35.0% |
| ! | TACTCGTTTGGATTCACTTT+TGG | + | chr3.4:85372003-85372022 | None:intergenic | 35.0% |
| ! | TATTGTTCTGTTTGTTGGTG+GGG | - | chr3.4:85372246-85372265 | MS.gene013451:intron | 35.0% |
| ! | TGAGGACTAGTATTATACGA+TGG | - | chr3.4:85375650-85375669 | MS.gene013451:CDS | 35.0% |
| ! | TGCAAATTGGAAAAGCATGT+GGG | - | chr3.4:85372342-85372361 | MS.gene013451:intron | 35.0% |
| ! | TTGGATCTGCAAACTTTTGT+TGG | - | chr3.4:85374519-85374538 | MS.gene013451:intron | 35.0% |
| !! | ACCACTCACTAATTTTAACC+TGG | + | chr3.4:85375266-85375285 | None:intergenic | 35.0% |
| !! | CAAGTCTTTAGAATCACTTC+TGG | - | chr3.4:85371974-85371993 | MS.gene013451:CDS | 35.0% |
| !! | CATTGTTGATTTGCTTACCA+GGG | - | chr3.4:85373555-85373574 | MS.gene013451:intron | 35.0% |
| !! | CTAATAATTGGGTTTGCTAG+TGG | - | chr3.4:85373105-85373124 | MS.gene013451:intron | 35.0% |
| !! | GGGATTTTACATTGCTTTTC+AGG | + | chr3.4:85374344-85374363 | None:intergenic | 35.0% |
| !! | TATGTTAGTTCTGCTATAGC+TGG | - | chr3.4:85374761-85374780 | MS.gene013451:CDS | 35.0% |
| !! | TCATTGTTGATTTGCTTACC+AGG | - | chr3.4:85373554-85373573 | MS.gene013451:intron | 35.0% |
| !! | TTAGTGTGTGTTTGGTTCTA+TGG | - | chr3.4:85371572-85371591 | MS.gene013451:intron | 35.0% |
| !!! | CATTGATTTTCACTTGACAG+TGG | + | chr3.4:85373631-85373650 | None:intergenic | 35.0% |
| !!! | CTTCACAGTTTGCTAGATTT+TGG | - | chr3.4:85373860-85373879 | MS.gene013451:CDS | 35.0% |
| AAATCGGATCCAGGAATGAA+TGG | + | chr3.4:85371401-85371420 | None:intergenic | 40.0% | |
| AAATTAGTGAGTGGTTAGGG+TGG | - | chr3.4:85375271-85375290 | MS.gene013451:intron | 40.0% | |
| AATTAGTGAGTGGTTAGGGT+GGG | - | chr3.4:85375272-85375291 | MS.gene013451:intron | 40.0% | |
| ACTCAACTCCAACTTTCCAA+GGG | + | chr3.4:85372861-85372880 | None:intergenic | 40.0% | |
| AGAGAAGGACTACATCATAC+TGG | + | chr3.4:85374060-85374079 | None:intergenic | 40.0% | |
| AGAGAATCTTCAAGAACAGC+TGG | + | chr3.4:85374886-85374905 | None:intergenic | 40.0% | |
| AGATAGGAAAGCTATAGGGA+AGG | - | chr3.4:85375724-85375743 | MS.gene013451:CDS | 40.0% | |
| AGCTCTTGTTAAGGTACATC+AGG | - | chr3.4:85373155-85373174 | MS.gene013451:intron | 40.0% | |
| ATAAGATCCAAGAGCAGCAA+AGG | + | chr3.4:85371489-85371508 | None:intergenic | 40.0% | |
| ATCCAGGAATGAATGGCAAA+GGG | + | chr3.4:85371394-85371413 | None:intergenic | 40.0% | |
| ATCCTAACTCTAACCGATGT+AGG | + | chr3.4:85371308-85371327 | None:intergenic | 40.0% | |
| ATCTCTAACTTGGTATCCCT+TGG | - | chr3.4:85372842-85372861 | MS.gene013451:intron | 40.0% | |
| ATGCCATTATGCCTTTGAGT+TGG | - | chr3.4:85372418-85372437 | MS.gene013451:intron | 40.0% | |
| ATTGAATACCTAGGTGGACA+GGG | - | chr3.4:85374271-85374290 | MS.gene013451:intron | 40.0% | |
| CACACTAAATAAACGGGAAG+AGG | + | chr3.4:85371560-85371579 | None:intergenic | 40.0% | |
| CATAGAGCTCAGTTGAAATC+TGG | - | chr3.4:85372172-85372191 | MS.gene013451:intron | 40.0% | |
| CATTGGCAAACAACAAGTGA+AGG | + | chr3.4:85372222-85372241 | None:intergenic | 40.0% | |
| CCAAAATGAACCCAACTCAA+AGG | + | chr3.4:85372432-85372451 | None:intergenic | 40.0% | |
| CTTATTGAGTGAATCCCATG+TGG | - | chr3.4:85374621-85374640 | MS.gene013451:intron | 40.0% | |
| GAACAAAACGTGCGTTGAAA+TGG | - | chr3.4:85371178-85371197 | MS.gene013451:CDS | 40.0% | |
| GAGAATCCAATTGAGGGATT+GGG | + | chr3.4:85371286-85371305 | None:intergenic | 40.0% | |
| GAGAATCTTCAAGAACAGCT+GGG | + | chr3.4:85374885-85374904 | None:intergenic | 40.0% | |
| GAGTGTGAAAGAGTTCCTTA+AGG | - | chr3.4:85372987-85373006 | MS.gene013451:intron | 40.0% | |
| GATGTAGGAGAATCCAATTG+AGG | + | chr3.4:85371293-85371312 | None:intergenic | 40.0% | |
| GCAGATTCTTGGAAAATACC+AGG | - | chr3.4:85371361-85371380 | MS.gene013451:intron | 40.0% | |
| GCCAGGTTAAAATTAGTGAG+TGG | - | chr3.4:85375262-85375281 | MS.gene013451:intron | 40.0% | |
| GGACAGTACATGGACTTTAT+TGG | - | chr3.4:85374839-85374858 | MS.gene013451:intron | 40.0% | |
| GTGCAGCTCTTGAAATCAAT+GGG | - | chr3.4:85372922-85372941 | MS.gene013451:intron | 40.0% | |
| TAATTGGGAAGGGATATCGA+GGG | - | chr3.4:85373322-85373341 | MS.gene013451:intron | 40.0% | |
| TATTGAATACCTAGGTGGAC+AGG | - | chr3.4:85374270-85374289 | MS.gene013451:intron | 40.0% | |
| TGCTCCATTGATGTTCAATG+AGG | - | chr3.4:85375632-85375651 | MS.gene013451:CDS | 40.0% | |
| TGGGTTGTGGAATTGTTTGT+AGG | - | chr3.4:85372274-85372293 | MS.gene013451:intron | 40.0% | |
| TGTTACCAATTTCCGTGTTG+GGG | - | chr3.4:85371451-85371470 | MS.gene013451:intron | 40.0% | |
| TTAATTGGGAAGGGATATCG+AGG | - | chr3.4:85373321-85373340 | MS.gene013451:intron | 40.0% | |
| TTCTAAGTGTGAGACCTACA+TGG | - | chr3.4:85374671-85374690 | MS.gene013451:intron | 40.0% | |
| ! | AACCCAACTCAAAGGCATAA+TGG | + | chr3.4:85372424-85372443 | None:intergenic | 40.0% |
| ! | AATCTTTGCGGCTTCTGAAA+TGG | - | chr3.4:85373070-85373089 | MS.gene013451:intron | 40.0% |
| ! | ATAAACGGGAAGAGGAGTAT+CGG | + | chr3.4:85371552-85371571 | None:intergenic | 40.0% |
| ! | ATGGGAAGAGAATTTTGAGC+AGG | - | chr3.4:85373701-85373720 | MS.gene013451:intron | 40.0% |
| ! | ATTCCTGGATCCGATTTTTC+AGG | - | chr3.4:85371404-85371423 | MS.gene013451:intron | 40.0% |
| ! | CTATTGTCATTGCTGTTGCT+AGG | - | chr3.4:85372366-85372385 | MS.gene013451:intron | 40.0% |
| ! | GCAAATTGGAAAAGCATGTG+GGG | - | chr3.4:85372343-85372362 | MS.gene013451:intron | 40.0% |
| ! | GTGCAAATTGGAAAAGCATG+TGG | - | chr3.4:85372341-85372360 | MS.gene013451:intron | 40.0% |
| ! | TGCCATTATGCCTTTGAGTT+GGG | - | chr3.4:85372419-85372438 | MS.gene013451:intron | 40.0% |
| ! | TTTTCACGGTGCAATCACAT+CGG | - | chr3.4:85372545-85372564 | MS.gene013451:intron | 40.0% |
| !! | ATCAATGGGTGTTGATCATG+TGG | - | chr3.4:85372936-85372955 | MS.gene013451:intron | 40.0% |
| !! | ATCTTTGCGGCTTCTGAAAT+GGG | - | chr3.4:85373071-85373090 | MS.gene013451:intron | 40.0% |
| !! | CAACTTTGGAATAGACCCAT+AGG | + | chr3.4:85374107-85374126 | None:intergenic | 40.0% |
| !! | CTAACATAAGAGGAGTGCTA+TGG | + | chr3.4:85374749-85374768 | None:intergenic | 40.0% |
| !!! | CCTTTGAGTTGGGTTCATTT+TGG | - | chr3.4:85372429-85372448 | MS.gene013451:intron | 40.0% |
| !!! | CTGGCATTTTGTTTGGCTTT+TGG | + | chr3.4:85374041-85374060 | None:intergenic | 40.0% |
| !!! | GCAGGCTGTTAGTTTTTTCA+AGG | + | chr3.4:85373899-85373918 | None:intergenic | 40.0% |
| !!! | TGACTGTTGCTTTTGCTGTT+CGG | - | chr3.4:85373419-85373438 | MS.gene013451:intron | 40.0% |
| AACAAACAGGATCCCCAACA+CGG | + | chr3.4:85371466-85371485 | None:intergenic | 45.0% | |
| AATCTTCAAGAACAGCTGGG+CGG | + | chr3.4:85374882-85374901 | None:intergenic | 45.0% | |
| AATTTGAAGGTTTCGCGTGC+CGG | - | chr3.4:85372081-85372100 | MS.gene013451:intron | 45.0% | |
| AGAGCAGCAAAGGAACAAAC+AGG | + | chr3.4:85371479-85371498 | None:intergenic | 45.0% | |
| AGCAGTTGCTAAATGTGCTG+CGG | + | chr3.4:85372506-85372525 | None:intergenic | 45.0% | |
| AGCTCAGTTGAAATCTGGTC+AGG | - | chr3.4:85372177-85372196 | MS.gene013451:intron | 45.0% | |
| AGTTACATGCACCCGTAGTA+GGG | - | chr3.4:85373480-85373499 | MS.gene013451:intron | 45.0% | |
| ATGAAACTGAGAGCTGAGAC+TGG | - | chr3.4:85374180-85374199 | MS.gene013451:intron | 45.0% | |
| ATGCCTGAAAAATCGGATCC+AGG | + | chr3.4:85371410-85371429 | None:intergenic | 45.0% | |
| CACTCAACTCCAACTTTCCA+AGG | + | chr3.4:85372862-85372881 | None:intergenic | 45.0% | |
| CAGAAAATTGGGTGACCCAA+CGG | - | chr3.4:85371214-85371233 | MS.gene013451:intron | 45.0% | |
| CTACTGTCTTGGTTGGCAAA+AGG | - | chr3.4:85374913-85374932 | MS.gene013451:intron | 45.0% | |
| CTTGGTATCCCTTGGAAAGT+TGG | - | chr3.4:85372850-85372869 | MS.gene013451:intron | 45.0% | |
| GAATCACCCAATCCCTCAAT+TGG | - | chr3.4:85371277-85371296 | MS.gene013451:intron | 45.0% | |
| GATCCAGGAATGAATGGCAA+AGG | + | chr3.4:85371395-85371414 | None:intergenic | 45.0% | |
| GCATTTGGCACTTCACATGT+TGG | - | chr3.4:85372142-85372161 | MS.gene013451:intron | 45.0% | |
| GGAGAATCCAATTGAGGGAT+TGG | + | chr3.4:85371287-85371306 | None:intergenic | 45.0% | |
| GGTGCAGCTCTTGAAATCAA+TGG | - | chr3.4:85372921-85372940 | MS.gene013451:intron | 45.0% | |
| GTCAGCACTAAACCTGAACA+AGG | + | chr3.4:85375182-85375201 | None:intergenic | 45.0% | |
| GTTTGTTCCTTTGCTGCTCT+TGG | - | chr3.4:85371479-85371498 | MS.gene013451:intron | 45.0% | |
| TCCAGGAATGAATGGCAAAG+GGG | + | chr3.4:85371393-85371412 | None:intergenic | 45.0% | |
| TGAAACTGAGAGCTGAGACT+GGG | - | chr3.4:85374181-85374200 | MS.gene013451:intron | 45.0% | |
| TGGCAGAATTGGACAGTACA+TGG | - | chr3.4:85374829-85374848 | MS.gene013451:intron | 45.0% | |
| TTGAGGGATTGGGTGATTCT+TGG | + | chr3.4:85371276-85371295 | None:intergenic | 45.0% | |
| ! | CTCCTACATCGGTTAGAGTT+AGG | - | chr3.4:85371303-85371322 | MS.gene013451:intron | 45.0% |
| ! | GTTTGTTGGTGGGGTTAAGT+GGG | - | chr3.4:85372255-85372274 | MS.gene013451:intron | 45.0% |
| ! | TGTTTGTTGGTGGGGTTAAG+TGG | - | chr3.4:85372254-85372273 | MS.gene013451:intron | 45.0% |
| !! | AATGGGTGTTGATCATGTGG+TGG | - | chr3.4:85372939-85372958 | MS.gene013451:intron | 45.0% |
| !! | CATGTTTACTGGCCTTGTTC+AGG | - | chr3.4:85375167-85375186 | MS.gene013451:intron | 45.0% |
| !! | GTTGATCATGTGGTGGACTT+GGG | - | chr3.4:85372946-85372965 | MS.gene013451:intron | 45.0% |
| !! | TCTTTGCGGCTTCTGAAATG+GGG | - | chr3.4:85373072-85373091 | MS.gene013451:intron | 45.0% |
| !! | TGTTGATCATGTGGTGGACT+TGG | - | chr3.4:85372945-85372964 | MS.gene013451:intron | 45.0% |
| !!! | TGGTTTTAGGGGAGCTGAAA+AGG | - | chr3.4:85372900-85372919 | MS.gene013451:intron | 45.0% |
| !! | AAATTTAAACTAAAAAAAAT+AGG | + | chr3.4:85375506-85375525 | None:intergenic | 5.0% |
| !! | AATTTAAACTAAAAAAAATA+GGG | + | chr3.4:85375505-85375524 | None:intergenic | 5.0% |
| AGGATCCCCAACACGGAAAT+TGG | + | chr3.4:85371459-85371478 | None:intergenic | 50.0% | |
| AGTGGTTAGGGTGGGAAAGT+TGG | - | chr3.4:85375280-85375299 | MS.gene013451:intron | 50.0% | |
| ATAAAGTGGCGAGACCCACA+TGG | + | chr3.4:85374639-85374658 | None:intergenic | 50.0% | |
| CAAGGAGCTACTGTCTTGGT+TGG | - | chr3.4:85374906-85374925 | MS.gene013451:intron | 50.0% | |
| CAGTTACATGCACCCGTAGT+AGG | - | chr3.4:85373479-85373498 | MS.gene013451:intron | 50.0% | |
| CCAGGAATGAATGGCAAAGG+GGG | + | chr3.4:85371392-85371411 | None:intergenic | 50.0% | |
| CCTATCTCTGATGGCAGTGA+AGG | + | chr3.4:85375711-85375730 | None:intergenic | 50.0% | |
| CCTTCACTGCCATCAGAGAT+AGG | - | chr3.4:85375708-85375727 | MS.gene013451:CDS | 50.0% | |
| CTCTCAAGGAGCTACTGTCT+TGG | - | chr3.4:85374902-85374921 | MS.gene013451:intron | 50.0% | |
| GAAACTGAGAGCTGAGACTG+GGG | - | chr3.4:85374182-85374201 | MS.gene013451:intron | 50.0% | |
| GATGTCCTGTATGACCCAGT+AGG | - | chr3.4:85373030-85373049 | MS.gene013451:intron | 50.0% | |
| GCAACCAAATCACAACCCTC+CGG | + | chr3.4:85372103-85372122 | None:intergenic | 50.0% | |
| GCTATGTTAGCAGGGATGAC+AGG | + | chr3.4:85373138-85373157 | None:intergenic | 50.0% | |
| GGTCTTGCAGCTGTGCAAAT+TGG | - | chr3.4:85372329-85372348 | MS.gene013451:intron | 50.0% | |
| TAAAGTGGCGAGACCCACAT+GGG | + | chr3.4:85374638-85374657 | None:intergenic | 50.0% | |
| TCATGAGCTTGCCTCCTACT+GGG | + | chr3.4:85373047-85373066 | None:intergenic | 50.0% | |
| TCATTCTTACGGCCTGTCAG+AGG | - | chr3.4:85374957-85374976 | MS.gene013451:intron | 50.0% | |
| TCTTGGGGTTCTATTTGGCC+AGG | - | chr3.4:85375245-85375264 | MS.gene013451:intron | 50.0% | |
| TTCATGAGCTTGCCTCCTAC+TGG | + | chr3.4:85373048-85373067 | None:intergenic | 50.0% | |
| ! | GGGATTTTCTGACCTCTGAC+AGG | + | chr3.4:85374972-85374991 | None:intergenic | 50.0% |
| ! | TGGGTCTCGCCACTTTATGT+GGG | - | chr3.4:85374641-85374660 | MS.gene013451:intron | 50.0% |
| !! | GGTTGTGATTTGGTTGCTGC+TGG | - | chr3.4:85372106-85372125 | MS.gene013451:intron | 50.0% |
| !! | TCAGGCATCGTTGATTCCGT+TGG | - | chr3.4:85371422-85371441 | MS.gene013451:intron | 50.0% |
| !!! | TTGCTAGTTTTGGGTGCAGC+AGG | - | chr3.4:85372299-85372318 | MS.gene013451:intron | 50.0% |
| ATGGCAAAGGGGGTTTCTCC+TGG | + | chr3.4:85371382-85371401 | None:intergenic | 55.0% | |
| CCCCCTTTGCCATTCATTCC+TGG | - | chr3.4:85371389-85371408 | MS.gene013451:intron | 55.0% | |
| CGTCTTCAACGCTCACCGTT+GGG | + | chr3.4:85371232-85371251 | None:intergenic | 55.0% | |
| GTCCTGTATGACCCAGTAGG+AGG | - | chr3.4:85373033-85373052 | MS.gene013451:intron | 55.0% | |
| TCGTCTTCAACGCTCACCGT+TGG | + | chr3.4:85371233-85371252 | None:intergenic | 55.0% | |
| TGAGAGAACCCTGTCCACCT+AGG | + | chr3.4:85374282-85374301 | None:intergenic | 55.0% | |
| TGCCTCCTACTGGGTCATAC+AGG | + | chr3.4:85373038-85373057 | None:intergenic | 55.0% | |
| TGGGTCTGCTAGCCCTACTA+CGG | + | chr3.4:85373495-85373514 | None:intergenic | 55.0% | |
| ! | GTGGGTCTCGCCACTTTATG+TGG | - | chr3.4:85374640-85374659 | MS.gene013451:intron | 55.0% |
| !! | GGAGCACTTGCTGTGGCATT+TGG | - | chr3.4:85372127-85372146 | MS.gene013451:intron | 55.0% |
| !! | TGGTGGGGTTAAGTGGGTTG+TGG | - | chr3.4:85372261-85372280 | MS.gene013451:intron | 55.0% |
| !!! | CTAGTTTTGGGTGCAGCAGG+AGG | - | chr3.4:85372302-85372321 | MS.gene013451:intron | 55.0% |
| CGTGCCGGAGGGTTGTGATT+TGG | - | chr3.4:85372096-85372115 | MS.gene013451:intron | 60.0% | |
| CTCTGATGGCAGTGAAGGCG+AGG | + | chr3.4:85375706-85375725 | None:intergenic | 60.0% | |
| GATGGCAGTGAAGGCGAGGT+TGG | + | chr3.4:85375702-85375721 | None:intergenic | 60.0% | |
| GGGTCTGCTAGCCCTACTAC+GGG | + | chr3.4:85373494-85373513 | None:intergenic | 60.0% | |
| TGAAGGTTTCGCGTGCCGGA+GGG | - | chr3.4:85372085-85372104 | MS.gene013451:intron | 60.0% | |
| TTGAAGGTTTCGCGTGCCGG+AGG | - | chr3.4:85372084-85372103 | MS.gene013451:intron | 60.0% | |
| TTTGGGTGCAGCAGGAGGTG+TGG | - | chr3.4:85372307-85372326 | MS.gene013451:intron | 60.0% | |
| ! | TGCTGCTGGAGCACTTGCTG+TGG | - | chr3.4:85372120-85372139 | MS.gene013451:intron | 60.0% |
| ! | TTGGGTGCAGCAGGAGGTGT+GGG | - | chr3.4:85372308-85372327 | MS.gene013451:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 85371122 | 85375790 | 85371122 | ID=MS.gene013451 |
| chr3.4 | mRNA | 85371122 | 85375790 | 85371122 | ID=MS.gene013451.t1;Parent=MS.gene013451 |
| chr3.4 | exon | 85375372 | 85375790 | 85375372 | ID=MS.gene013451.t1.exon1;Parent=MS.gene013451.t1 |
| chr3.4 | CDS | 85375372 | 85375790 | 85375372 | ID=cds.MS.gene013451.t1;Parent=MS.gene013451.t1 |
| chr3.4 | exon | 85374714 | 85374822 | 85374714 | ID=MS.gene013451.t1.exon2;Parent=MS.gene013451.t1 |
| chr3.4 | CDS | 85374714 | 85374822 | 85374714 | ID=cds.MS.gene013451.t1;Parent=MS.gene013451.t1 |
| chr3.4 | exon | 85374525 | 85374616 | 85374525 | ID=MS.gene013451.t1.exon3;Parent=MS.gene013451.t1 |
| chr3.4 | CDS | 85374525 | 85374616 | 85374525 | ID=cds.MS.gene013451.t1;Parent=MS.gene013451.t1 |
| chr3.4 | exon | 85373745 | 85374003 | 85373745 | ID=MS.gene013451.t1.exon4;Parent=MS.gene013451.t1 |
| chr3.4 | CDS | 85373745 | 85374003 | 85373745 | ID=cds.MS.gene013451.t1;Parent=MS.gene013451.t1 |
| chr3.4 | exon | 85371934 | 85372077 | 85371934 | ID=MS.gene013451.t1.exon5;Parent=MS.gene013451.t1 |
| chr3.4 | CDS | 85371934 | 85372077 | 85371934 | ID=cds.MS.gene013451.t1;Parent=MS.gene013451.t1 |
| chr3.4 | exon | 85371122 | 85371214 | 85371122 | ID=MS.gene013451.t1.exon6;Parent=MS.gene013451.t1 |
| chr3.4 | CDS | 85371122 | 85371214 | 85371122 | ID=cds.MS.gene013451.t1;Parent=MS.gene013451.t1 |
| Gene Sequence |
| Protein sequence |
