Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014451.t1 | XP_003603733.1 | 97.4 | 387 | 9 | 1 | 1 | 387 | 1 | 386 | 1.90E-224 | 788.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014451.t1 | Q0J0A4 | 82.8 | 366 | 62 | 1 | 23 | 387 | 49 | 414 | 1.4e-188 | 660.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014451.t1 | G7J4P3 | 97.4 | 387 | 9 | 1 | 1 | 387 | 1 | 386 | 1.3e-224 | 788.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene51627 | MS.gene014451 | PPI |
| MS.gene009458 | MS.gene014451 | PPI |
| MS.gene014451 | MS.gene56256 | PPI |
| MS.gene014451 | MS.gene63514 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014451.t1 | MTR_3g113160 | 97.416 | 387 | 9 | 1 | 1 | 387 | 1 | 386 | 0.0 | 783 |
| MS.gene014451.t1 | MTR_1g023340 | 80.263 | 380 | 70 | 2 | 9 | 387 | 4 | 379 | 0.0 | 648 |
| MS.gene014451.t1 | MTR_1g023340 | 79.130 | 345 | 67 | 2 | 9 | 352 | 17 | 357 | 0.0 | 578 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene014451.t1 | AT4G24160 | 81.522 | 368 | 66 | 2 | 19 | 384 | 48 | 415 | 0.0 | 640 |
| MS.gene014451.t1 | AT4G24160 | 83.624 | 287 | 46 | 1 | 19 | 304 | 48 | 334 | 0.0 | 511 |
Find 99 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATGTACAACACTTAATTT+TGG | 0.224490 | 3.1:-89904974 | MS.gene014451:CDS |
| ACTGACCTTGAGCGCGTATT+TGG | 0.229778 | 3.1:+89905103 | None:intergenic |
| CCTACGCTTGTTATGGTTCA+TGG | 0.238094 | 3.1:-89905541 | MS.gene014451:CDS |
| TAGTACTACTTACTTGATAA+TGG | 0.269614 | 3.1:+89905771 | None:intergenic |
| AGGTTCCATGTGAAATTATC+AGG | 0.270422 | 3.1:-89902293 | MS.gene014451:CDS |
| TTAGTAACAAACTCAGTCTT+TGG | 0.271154 | 3.1:+89904919 | None:intergenic |
| ATACTGCTTGGACATTCTTT+TGG | 0.272412 | 3.1:-89905140 | MS.gene014451:CDS |
| GTGGCAGAGGTTTAGGTCCT+TGG | 0.277706 | 3.1:-89903662 | MS.gene014451:intron |
| GAGCCGTTCTGAACCATCTA+TGG | 0.283949 | 3.1:-89904876 | MS.gene014451:CDS |
| GAGAAAACGCGGCTCGTTAC+TGG | 0.289319 | 3.1:+89905597 | None:intergenic |
| TGCATTTGTGGCAGAGGTTT+AGG | 0.300561 | 3.1:-89903669 | MS.gene014451:intron |
| TGGCAGAGGTTTAGGTCCTT+GGG | 0.303425 | 3.1:-89903661 | MS.gene014451:intron |
| TCATATGCTTGCGAGCTTCT+TGG | 0.307279 | 3.1:+89902316 | None:intergenic |
| TCATGGATACGCTGCTTCTC+AGG | 0.312153 | 3.1:-89905524 | MS.gene014451:CDS |
| CTTCGAAATCTAAAAGCTTC+TGG | 0.316718 | 3.1:-89905858 | MS.gene014451:CDS |
| TCATATATGGTTACGAAGAT+TGG | 0.317405 | 3.1:-89902356 | MS.gene014451:CDS |
| CATATGCTTGCGAGCTTCTT+GGG | 0.332927 | 3.1:+89902317 | None:intergenic |
| GTATATTTGCGGACCATGTT+AGG | 0.355647 | 3.1:+89903636 | None:intergenic |
| TAAAATTAGATTCCCATAGA+TGG | 0.360134 | 3.1:+89904863 | None:intergenic |
| AAGGTTTCTTACCCCAAATT+CGG | 0.374235 | 3.1:-89902113 | MS.gene014451:CDS |
| TGATTCTCCTACGCTTGTTA+TGG | 0.377711 | 3.1:-89905548 | MS.gene014451:CDS |
| GTGCCCACCACATTCATATA+TGG | 0.386094 | 3.1:-89902369 | MS.gene014451:CDS |
| ATAACAAGCGTAGGAGAATC+AGG | 0.396588 | 3.1:+89905550 | None:intergenic |
| TAAGCAGACGATAGCCCTTC+GGG | 0.404316 | 3.1:+89902076 | None:intergenic |
| ATTAAGTGTTGTACATGCTC+AGG | 0.405149 | 3.1:+89904979 | None:intergenic |
| ACACAGCTCCCCACTAGCTT+TGG | 0.405889 | 3.1:+89903436 | None:intergenic |
| ATGTCCAAGCAGTATGAAAT+TGG | 0.409418 | 3.1:+89905148 | None:intergenic |
| AGGTTTGGTACACATTCAAC+CGG | 0.416717 | 3.1:-89903606 | MS.gene014451:CDS |
| ACCTAGCGCTTGTATATTTG+CGG | 0.429818 | 3.1:+89903625 | None:intergenic |
| CTAGGATGCCCCTTCTTCAA+AGG | 0.443647 | 3.1:-89903382 | MS.gene014451:intron |
| AACATAGGTTCTGGTCCTCC+TGG | 0.445179 | 3.1:-89905646 | MS.gene014451:CDS |
| GAGGAATCAAGTCTGCTAAC+TGG | 0.445927 | 3.1:-89903567 | MS.gene014451:intron |
| GAGCGTGTTAACATAGGTTC+TGG | 0.447895 | 3.1:-89905655 | MS.gene014451:CDS |
| CTCCTGGCTCTAAAGTTAGA+TGG | 0.450780 | 3.1:-89905630 | MS.gene014451:CDS |
| GCTTCTGGTCTTCACTCCGT+TGG | 0.462666 | 3.1:-89905843 | MS.gene014451:CDS |
| CTGACCAATTTCATACTGCT+TGG | 0.468352 | 3.1:-89905152 | MS.gene014451:CDS |
| CTAAGCAGACGATAGCCCTT+CGG | 0.468701 | 3.1:+89902075 | None:intergenic |
| GTCAATGAACACAAAATGTC+CGG | 0.479554 | 3.1:+89902177 | None:intergenic |
| TGAAATTATCAGGGTCCCTC+AGG | 0.480922 | 3.1:-89902283 | MS.gene014451:intron |
| AAATATACAAGCGCTAGGTT+TGG | 0.481313 | 3.1:-89903621 | MS.gene014451:CDS |
| GATTGCCAAACCTTTGAAGA+AGG | 0.482203 | 3.1:+89903372 | None:intergenic |
| AGGTCCTTGGGGTCCTAACA+TGG | 0.493507 | 3.1:-89903649 | MS.gene014451:CDS |
| CGAAGGGCTATCGTCTGCTT+AGG | 0.496103 | 3.1:-89902074 | None:intergenic |
| CTTACTTGATAATGGAAAGA+AGG | 0.504243 | 3.1:+89905779 | None:intergenic |
| TTGCATTTGGAGCATTTGCT+AGG | 0.504415 | 3.1:-89903400 | MS.gene014451:CDS |
| ATCATTGCTGTTGATCAACT+TGG | 0.506443 | 3.1:-89905457 | MS.gene014451:CDS |
| GTTTCTTCTGTAAACCCGGC+AGG | 0.515353 | 3.1:+89904946 | None:intergenic |
| CATGGATACGCTGCTTCTCA+GGG | 0.521168 | 3.1:-89905523 | MS.gene014451:CDS |
| GTTCAAGAGCGTGTTAACAT+AGG | 0.522283 | 3.1:-89905661 | MS.gene014451:CDS |
| GTGGTGGGCACTTTCCACTC+TGG | 0.523249 | 3.1:+89902381 | None:intergenic |
| AGATTATGTTTATCATACAT+TGG | 0.527652 | 3.1:-89903462 | MS.gene014451:CDS |
| CAGCTGAATGGAAGCCACTT+GGG | 0.528872 | 3.1:+89902152 | None:intergenic |
| AAGCATAAAACACAGCTGAA+TGG | 0.533305 | 3.1:+89902140 | None:intergenic |
| ACAGCTGAATGGAAGCCACT+TGG | 0.534128 | 3.1:+89902151 | None:intergenic |
| ATCTGTTTCTTCTGTAAACC+CGG | 0.536750 | 3.1:+89904942 | None:intergenic |
| TTCACATGTAAAAGTACTGA+AGG | 0.544682 | 3.1:-89905312 | MS.gene014451:intron |
| ATTGCCAAACCTTTGAAGAA+GGG | 0.549575 | 3.1:+89903373 | None:intergenic |
| CATTGGCGGCCAAAGCTAGT+GGG | 0.553970 | 3.1:-89903445 | MS.gene014451:CDS |
| AACCATCTAACTTTAGAGCC+AGG | 0.557305 | 3.1:+89905628 | None:intergenic |
| AGAAGCTCGCAAGCATATGA+AGG | 0.558147 | 3.1:-89902313 | MS.gene014451:CDS |
| GGCAGAGGTTTAGGTCCTTG+GGG | 0.564857 | 3.1:-89903660 | MS.gene014451:intron |
| ACATTGGCGGCCAAAGCTAG+TGG | 0.568091 | 3.1:-89903446 | MS.gene014451:CDS |
| ATGATATGATCGGTTGAAGT+GGG | 0.570401 | 3.1:+89905817 | None:intergenic |
| TTGCCAAACCTTTGAAGAAG+GGG | 0.577063 | 3.1:+89903374 | None:intergenic |
| GAAAATGAATCTCTTCCCGA+AGG | 0.579910 | 3.1:-89902091 | MS.gene014451:CDS |
| AAGTTTCGAGCAACATGGAA+GGG | 0.587783 | 3.1:-89904898 | MS.gene014451:CDS |
| GCGGCTCGTTACTGGTTGAA+CGG | 0.595132 | 3.1:+89905605 | None:intergenic |
| AGCCGTTCTGAACCATCTAT+GGG | 0.595543 | 3.1:-89904875 | MS.gene014451:CDS |
| TAAGTTTCGAGCAACATGGA+AGG | 0.597296 | 3.1:-89904899 | MS.gene014451:CDS |
| TGCTTCCAAATACGCGCTCA+AGG | 0.600744 | 3.1:-89905108 | MS.gene014451:intron |
| TTATGTTTATCATACATTGG+CGG | 0.606664 | 3.1:-89903459 | MS.gene014451:CDS |
| TTAAGTGTTGTACATGCTCA+GGG | 0.606900 | 3.1:+89904980 | None:intergenic |
| GATGATATGATCGGTTGAAG+TGG | 0.613666 | 3.1:+89905816 | None:intergenic |
| ATCTTGCAGAAACTGAGGCA+TGG | 0.614755 | 3.1:-89905214 | MS.gene014451:intron |
| TTCGTAACCATATATGAATG+TGG | 0.615369 | 3.1:+89902362 | None:intergenic |
| CTCAGCGGCGATGATATGAT+CGG | 0.621828 | 3.1:+89905807 | None:intergenic |
| CCATGAACCATAACAAGCGT+AGG | 0.627502 | 3.1:+89905541 | None:intergenic |
| TAACCATATATGAATGTGGT+GGG | 0.627519 | 3.1:+89902366 | None:intergenic |
| TCATTGCTGTTGATCAACTT+GGG | 0.634448 | 3.1:-89905456 | MS.gene014451:intron |
| GTGTTCATTGACAACCCAAG+TGG | 0.634463 | 3.1:-89902166 | MS.gene014451:CDS |
| TTTCTTGCAGTGCTCCAGAG+TGG | 0.634871 | 3.1:-89902395 | MS.gene014451:intron |
| ATTGGCGGCCAAAGCTAGTG+GGG | 0.638338 | 3.1:-89903444 | MS.gene014451:CDS |
| GGTTCCATGTGAAATTATCA+GGG | 0.643857 | 3.1:-89902292 | MS.gene014451:CDS |
| CGGACCATGTTAGGACCCCA+AGG | 0.646328 | 3.1:+89903645 | None:intergenic |
| AAAATGAATCTCTTCCCGAA+GGG | 0.646555 | 3.1:-89902090 | MS.gene014451:CDS |
| AGCAATGATTCTGAAACGAG+AGG | 0.649538 | 3.1:+89905471 | None:intergenic |
| TTACTAAGTTTCGAGCAACA+TGG | 0.649865 | 3.1:-89904903 | MS.gene014451:CDS |
| GGAAAGAAGGCGTTTCTCAG+CGG | 0.650667 | 3.1:+89905792 | None:intergenic |
| TCCGCAAATATACAAGCGCT+AGG | 0.656139 | 3.1:-89903626 | MS.gene014451:CDS |
| GTAACCATATATGAATGTGG+TGG | 0.658814 | 3.1:+89902365 | None:intergenic |
| TGTTGATCTTGCAGAAACTG+AGG | 0.661163 | 3.1:-89905219 | MS.gene014451:intron |
| ATTAGACAAAACGACGACGT+CGG | 0.664772 | 3.1:-89905889 | MS.gene014451:CDS |
| TTCCCATAGATGGTTCAGAA+CGG | 0.677131 | 3.1:+89904873 | None:intergenic |
| CGGTTGAAGTGGGAATCCAA+CGG | 0.678476 | 3.1:+89905827 | None:intergenic |
| GAAGATTGGATGAATTACGA+AGG | 0.684343 | 3.1:-89902342 | MS.gene014451:CDS |
| GGTTTGGTACACATTCAACC+GGG | 0.692249 | 3.1:-89903605 | MS.gene014451:CDS |
| GTAACAGTGTTGAGAAAACG+CGG | 0.698377 | 3.1:+89905586 | None:intergenic |
| GGGACCCTGATAATTTCACA+TGG | 0.704694 | 3.1:+89902288 | None:intergenic |
| CATCTAACTTTAGAGCCAGG+AGG | 0.752922 | 3.1:+89905631 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTACAAATACATATTAA+AGG | + | chr3.1:89903545-89903564 | None:intergenic | 10.0% |
| !!! | TTAAAATATATTTTTGCATT+TGG | - | chr3.1:89904563-89904582 | MS.gene014451:intron | 10.0% |
| !!! | TTTTTGATGATAAAAATATA+GGG | + | chr3.1:89905280-89905299 | None:intergenic | 10.0% |
| !!! | TTTTTTGATGATAAAAATAT+AGG | + | chr3.1:89905281-89905300 | None:intergenic | 10.0% |
| !! | AAAATTAAAACATGAACTTA+AGG | - | chr3.1:89905416-89905435 | MS.gene014451:intron | 15.0% |
| !! | AAATTAAAACATGAACTTAA+GGG | - | chr3.1:89905417-89905436 | MS.gene014451:intron | 15.0% |
| !! | ACAAAATAATATAACAATGT+TGG | + | chr3.1:89904263-89904282 | None:intergenic | 15.0% |
| !! | AGATAAATATCTTGATTATT+AGG | - | chr3.1:89905500-89905519 | MS.gene014451:CDS | 15.0% |
| !! | CAAGATATTAAATTGATATA+TGG | - | chr3.1:89904437-89904456 | MS.gene014451:intron | 15.0% |
| !! | TAATAACAATAAAAAGTGAT+TGG | + | chr3.1:89903933-89903952 | None:intergenic | 15.0% |
| !! | TTATTACTCAAATCAAATAT+GGG | - | chr3.1:89903947-89903966 | MS.gene014451:intron | 15.0% |
| !!! | AAAAAATGTTTCATTGTTTT+AGG | + | chr3.1:89905738-89905757 | None:intergenic | 15.0% |
| !!! | ACAATTTTCTGTTATTATAT+TGG | - | chr3.1:89903284-89903303 | MS.gene014451:intron | 15.0% |
| !!! | GTTTTTTTTTTCTCTTATTA+TGG | - | chr3.1:89903876-89903895 | MS.gene014451:intron | 15.0% |
| !!! | TCTTTTTTGTTTTCATTTTT+GGG | - | chr3.1:89904786-89904805 | MS.gene014451:intron | 15.0% |
| !!! | TTCTTTTTTGTTTTCATTTT+TGG | - | chr3.1:89904785-89904804 | MS.gene014451:intron | 15.0% |
| !! | AAATGAATAAAATATGCATC+AGG | + | chr3.1:89902966-89902985 | None:intergenic | 20.0% |
| !! | AATTAAAACATGAACTTAAG+GGG | - | chr3.1:89905418-89905437 | MS.gene014451:intron | 20.0% |
| !! | ACAAATACATATTAAAGGAA+GGG | + | chr3.1:89903540-89903559 | None:intergenic | 20.0% |
| !! | ACGAAATTTAAATAGGTAAA+CGG | + | chr3.1:89902737-89902756 | None:intergenic | 20.0% |
| !! | AGATTATGTTTATCATACAT+TGG | - | chr3.1:89904514-89904533 | MS.gene014451:intron | 20.0% |
| !! | AGTTCTACTTAATAACTATT+TGG | - | chr3.1:89903611-89903630 | MS.gene014451:CDS | 20.0% |
| !! | ATCAACAACGAAATTTAAAT+AGG | + | chr3.1:89902744-89902763 | None:intergenic | 20.0% |
| !! | CCATAGAATAAAGTATAAAA+TGG | - | chr3.1:89904220-89904239 | MS.gene014451:intron | 20.0% |
| !! | GATTAAAAAATTATACCTGA+GGG | + | chr3.1:89905711-89905730 | None:intergenic | 20.0% |
| !! | GTTATTACTCAAATCAAATA+TGG | - | chr3.1:89903946-89903965 | MS.gene014451:intron | 20.0% |
| !! | TACAAATACATATTAAAGGA+AGG | + | chr3.1:89903541-89903560 | None:intergenic | 20.0% |
| !! | TATCATAGGATGATAAAAAT+GGG | + | chr3.1:89903177-89903196 | None:intergenic | 20.0% |
| !! | TGATTAAAAAATTATACCTG+AGG | + | chr3.1:89905712-89905731 | None:intergenic | 20.0% |
| !! | TTATCATAGGATGATAAAAA+TGG | + | chr3.1:89903178-89903197 | None:intergenic | 20.0% |
| !!! | AATTTGTTTGTTTGTTTGTT+AGG | - | chr3.1:89902283-89902302 | MS.gene014451:intron | 20.0% |
| !!! | CCATTTTATACTTTATTCTA+TGG | + | chr3.1:89904223-89904242 | None:intergenic | 20.0% |
| !!! | GTATACTTTTATTTATGAAG+AGG | - | chr3.1:89903252-89903271 | MS.gene014451:intron | 20.0% |
| !!! | TCATAAATAAAAGTATACAC+AGG | + | chr3.1:89903250-89903269 | None:intergenic | 20.0% |
| !!! | TTCTATATATTTTCACAGTT+GGG | - | chr3.1:89902621-89902640 | MS.gene014451:intron | 20.0% |
| !!! | TTTCTATATATTTTCACAGT+TGG | - | chr3.1:89902620-89902639 | MS.gene014451:intron | 20.0% |
| ! | AAATCAAATATGGGATTAGA+GGG | - | chr3.1:89903956-89903975 | MS.gene014451:intron | 25.0% |
| ! | AAATTAATTACTTCTATCGC+AGG | - | chr3.1:89905776-89905795 | MS.gene014451:intron | 25.0% |
| ! | ACAAGAACAATTAAGTCAAT+AGG | + | chr3.1:89904876-89904895 | None:intergenic | 25.0% |
| ! | ATGTTTGGGAAAAATAGAAT+AGG | - | chr3.1:89904976-89904995 | MS.gene014451:CDS | 25.0% |
| ! | CAAAAAATTGTCAGGTAAAA+AGG | - | chr3.1:89903141-89903160 | MS.gene014451:intron | 25.0% |
| ! | CATCAAAAAAGAAAAAAGCT+TGG | - | chr3.1:89905291-89905310 | MS.gene014451:intron | 25.0% |
| ! | GTAAAAGAAAGTTAAGAAGT+CGG | + | chr3.1:89902936-89902955 | None:intergenic | 25.0% |
| ! | TAAAATTAGATTCCCATAGA+TGG | + | chr3.1:89903116-89903135 | None:intergenic | 25.0% |
| ! | TAGTACTACTTACTTGATAA+TGG | + | chr3.1:89902208-89902227 | None:intergenic | 25.0% |
| ! | TATCAGGTTTCAATAAATGA+GGG | - | chr3.1:89904039-89904058 | MS.gene014451:intron | 25.0% |
| ! | TATTACTAACTCTTAAGTCA+TGG | - | chr3.1:89903700-89903719 | MS.gene014451:intron | 25.0% |
| ! | TGATAAAAATATAGGGTGAA+AGG | + | chr3.1:89905273-89905292 | None:intergenic | 25.0% |
| ! | TTATGTTTATCATACATTGG+CGG | - | chr3.1:89904517-89904536 | MS.gene014451:intron | 25.0% |
| ! | TTATTAGGATTAATATCCCA+TGG | - | chr3.1:89905515-89905534 | MS.gene014451:CDS | 25.0% |
| !! | CTTAACTTTCTTTTACCAAA+CGG | - | chr3.1:89902940-89902959 | MS.gene014451:intron | 25.0% |
| !! | TATGAAATTGGTCAGATTTT+TGG | + | chr3.1:89902819-89902838 | None:intergenic | 25.0% |
| !! | TCTATATATTTTCACAGTTG+GGG | - | chr3.1:89902622-89902641 | MS.gene014451:intron | 25.0% |
| !! | TGATTGTGTTGGTAAAAAAT+TGG | + | chr3.1:89905171-89905190 | None:intergenic | 25.0% |
| !! | TTTTACCTGACAATTTTTTG+AGG | + | chr3.1:89903141-89903160 | None:intergenic | 25.0% |
| !!! | AATTTTCATTTCTGTTTCTG+TGG | - | chr3.1:89904133-89904152 | MS.gene014451:intron | 25.0% |
| !!! | TGACTTAATTGTTCTTGTTT+TGG | - | chr3.1:89904878-89904897 | MS.gene014451:CDS | 25.0% |
| !!! | TTCTGTTATTATATTGGTTC+TGG | - | chr3.1:89903290-89903309 | MS.gene014451:intron | 25.0% |
| AACAATTAAGTCAATAGGAG+TGG | + | chr3.1:89904871-89904890 | None:intergenic | 30.0% | |
| AACAGTTATCTTGATTGTGT+TGG | + | chr3.1:89905182-89905201 | None:intergenic | 30.0% | |
| AATCAAATATGGGATTAGAG+GGG | - | chr3.1:89903957-89903976 | MS.gene014451:intron | 30.0% | |
| AATGTGTGCTAACTTATCAT+AGG | + | chr3.1:89903191-89903210 | None:intergenic | 30.0% | |
| ACAATTAAGTCAATAGGAGT+GGG | + | chr3.1:89904870-89904889 | None:intergenic | 30.0% | |
| ACTTAAAACAGCTAATCAGA+TGG | + | chr3.1:89904639-89904658 | None:intergenic | 30.0% | |
| ACTTAAGGGGAAAAAAATTC+AGG | - | chr3.1:89905431-89905450 | MS.gene014451:intron | 30.0% | |
| AGAGTCTTCTACTATATATC+AGG | - | chr3.1:89903347-89903366 | MS.gene014451:intron | 30.0% | |
| ATCTCTATGTATGACATGAT+TGG | + | chr3.1:89904711-89904730 | None:intergenic | 30.0% | |
| CAAATCAAATATGGGATTAG+AGG | - | chr3.1:89903955-89903974 | MS.gene014451:intron | 30.0% | |
| CTTAAAACAGCTAATCAGAT+GGG | + | chr3.1:89904638-89904657 | None:intergenic | 30.0% | |
| GAGTCTTCTACTATATATCA+GGG | - | chr3.1:89903348-89903367 | MS.gene014451:intron | 30.0% | |
| GTAATCTTAAGTCAATATGC+CGG | + | chr3.1:89903586-89903605 | None:intergenic | 30.0% | |
| GTATCAGGTTTCAATAAATG+AGG | - | chr3.1:89904038-89904057 | MS.gene014451:intron | 30.0% | |
| TAACCATATATGAATGTGGT+GGG | + | chr3.1:89905613-89905632 | None:intergenic | 30.0% | |
| TCAACCATTAATTAAGCCAA+GGG | + | chr3.1:89903755-89903774 | None:intergenic | 30.0% | |
| TCATATATGGTTACGAAGAT+TGG | - | chr3.1:89905620-89905639 | MS.gene014451:CDS | 30.0% | |
| TTAATTAATGGTTGAGGACT+TGG | - | chr3.1:89903760-89903779 | MS.gene014451:intron | 30.0% | |
| TTACACCTCAAAAAATTGTC+AGG | - | chr3.1:89903133-89903152 | MS.gene014451:intron | 30.0% | |
| TTAGTAACAAACTCAGTCTT+TGG | + | chr3.1:89903060-89903079 | None:intergenic | 30.0% | |
| TTATTATGGTTACAAGCAGA+AGG | - | chr3.1:89903890-89903909 | MS.gene014451:intron | 30.0% | |
| TTCGTAACCATATATGAATG+TGG | + | chr3.1:89905617-89905636 | None:intergenic | 30.0% | |
| TTGTTATAACTGAAGTTGAC+CGG | - | chr3.1:89903564-89903583 | MS.gene014451:intron | 30.0% | |
| ! | AGAGATTCATTTTCCGAATT+TGG | + | chr3.1:89905879-89905898 | None:intergenic | 30.0% |
| ! | AGATTCATTTTCCGAATTTG+GGG | + | chr3.1:89905877-89905896 | None:intergenic | 30.0% |
| ! | AGTCATGGATGTAATCATTT+TGG | - | chr3.1:89903715-89903734 | MS.gene014451:intron | 30.0% |
| ! | GAGATTCATTTTCCGAATTT+GGG | + | chr3.1:89905878-89905897 | None:intergenic | 30.0% |
| ! | GCATGTACAACACTTAATTT+TGG | - | chr3.1:89903002-89903021 | MS.gene014451:intron | 30.0% |
| ! | GTACTTTTACATGTGAAATC+AGG | + | chr3.1:89902661-89902680 | None:intergenic | 30.0% |
| ! | TAATTTTCTTCCTGAATGCT+TGG | + | chr3.1:89905403-89905422 | None:intergenic | 30.0% |
| ! | TGTACAACACTTAATTTTGG+TGG | - | chr3.1:89903005-89903024 | MS.gene014451:intron | 30.0% |
| ! | TTATGCTACTTCTAAGTATC+AGG | - | chr3.1:89904023-89904042 | MS.gene014451:intron | 30.0% |
| ! | TTTGTTTGTTTGTTAGGACT+GGG | - | chr3.1:89902289-89902308 | MS.gene014451:CDS | 30.0% |
| !! | AGCTTTATTGTATATGAGCA+CGG | - | chr3.1:89903852-89903871 | MS.gene014451:intron | 30.0% |
| !! | ATTTTAATGCAATGCAGCAA+TGG | + | chr3.1:89902902-89902921 | None:intergenic | 30.0% |
| !! | CTTACTTGATAATGGAAAGA+AGG | + | chr3.1:89902200-89902219 | None:intergenic | 30.0% |
| !! | GTACAACACTTAATTTTGGT+GGG | - | chr3.1:89903006-89903025 | MS.gene014451:intron | 30.0% |
| !! | TTCACATGTAAAAGTACTGA+AGG | - | chr3.1:89902664-89902683 | MS.gene014451:intron | 30.0% |
| !! | TTGTCTTTGAAATGAAGTGT+TGG | - | chr3.1:89903460-89903479 | MS.gene014451:CDS | 30.0% |
| !! | TTTTAGCCAATGTCTTGTTA+AGG | - | chr3.1:89905539-89905558 | MS.gene014451:CDS | 30.0% |
| !!! | AATCACCCTTACATGTTTTT+TGG | - | chr3.1:89904173-89904192 | MS.gene014451:intron | 30.0% |
| !!! | ATGGTTCATTGATTCTTTTG+AGG | - | chr3.1:89902781-89902800 | MS.gene014451:intron | 30.0% |
| !!! | GTGGTGCTACAATTTTTATA+AGG | + | chr3.1:89904844-89904863 | None:intergenic | 30.0% |
| !!! | TCATTGATTCTTTTGAGGAA+TGG | - | chr3.1:89902786-89902805 | MS.gene014451:intron | 30.0% |
| AAAAAGAAAAAAGCTTGGCC+AGG | - | chr3.1:89905296-89905315 | MS.gene014451:intron | 35.0% | |
| AAAAGAAAAAAGCTTGGCCA+GGG | - | chr3.1:89905297-89905316 | MS.gene014451:intron | 35.0% | |
| AAAATGAATCTCTTCCCGAA+GGG | - | chr3.1:89905886-89905905 | MS.gene014451:CDS | 35.0% | |
| AAATATACAAGCGCTAGGTT+TGG | - | chr3.1:89904355-89904374 | MS.gene014451:intron | 35.0% | |
| AAATATCATTCCACGAAGCA+TGG | - | chr3.1:89904083-89904102 | MS.gene014451:intron | 35.0% | |
| AAATGTCTAACCAAGCATTC+AGG | - | chr3.1:89905390-89905409 | MS.gene014451:intron | 35.0% | |
| AAGCATAAAACACAGCTGAA+TGG | + | chr3.1:89905839-89905858 | None:intergenic | 35.0% | |
| AAGGTTTCTTACCCCAAATT+CGG | - | chr3.1:89905863-89905882 | MS.gene014451:CDS | 35.0% | |
| AGAGTCATTCTTCTACTTGT+AGG | - | chr3.1:89903982-89904001 | MS.gene014451:intron | 35.0% | |
| AGGTTCCATGTGAAATTATC+AGG | - | chr3.1:89905683-89905702 | MS.gene014451:intron | 35.0% | |
| ATACAATAAAGCTCTTGCCA+CGG | + | chr3.1:89903845-89903864 | None:intergenic | 35.0% | |
| ATGACCCTTGGCTTAATTAA+TGG | - | chr3.1:89903748-89903767 | MS.gene014451:intron | 35.0% | |
| ATGATATGATCGGTTGAAGT+GGG | + | chr3.1:89902162-89902181 | None:intergenic | 35.0% | |
| ATGTCCAAGCAGTATGAAAT+TGG | + | chr3.1:89902831-89902850 | None:intergenic | 35.0% | |
| CTCAACCATTAATTAAGCCA+AGG | + | chr3.1:89903756-89903775 | None:intergenic | 35.0% | |
| CTTCGAAATCTAAAAGCTTC+TGG | - | chr3.1:89902118-89902137 | MS.gene014451:CDS | 35.0% | |
| CTTGGCTTAATTAATGGTTG+AGG | - | chr3.1:89903754-89903773 | MS.gene014451:intron | 35.0% | |
| GAAGATTGGATGAATTACGA+AGG | - | chr3.1:89905634-89905653 | MS.gene014451:CDS | 35.0% | |
| GGTTCCATGTGAAATTATCA+GGG | - | chr3.1:89905684-89905703 | MS.gene014451:intron | 35.0% | |
| GTAACCATATATGAATGTGG+TGG | + | chr3.1:89905614-89905633 | None:intergenic | 35.0% | |
| GTCAATGAACACAAAATGTC+CGG | + | chr3.1:89905802-89905821 | None:intergenic | 35.0% | |
| GTGACTATTCTCATGTTTGT+TGG | + | chr3.1:89904199-89904218 | None:intergenic | 35.0% | |
| GTTGGCCAAAAAACATGTAA+GGG | + | chr3.1:89904181-89904200 | None:intergenic | 35.0% | |
| TACTTTGTTGCTCGACTTTA+AGG | - | chr3.1:89902708-89902727 | MS.gene014451:intron | 35.0% | |
| TCTACAGTATCAACAAACTG+AGG | + | chr3.1:89903330-89903349 | None:intergenic | 35.0% | |
| TGAGGGAAAGCTAGAAAAAA+TGG | - | chr3.1:89904056-89904075 | MS.gene014451:intron | 35.0% | |
| TGTTGGCCAAAAAACATGTA+AGG | + | chr3.1:89904182-89904201 | None:intergenic | 35.0% | |
| TTACTAAGTTTCGAGCAACA+TGG | - | chr3.1:89903073-89903092 | MS.gene014451:intron | 35.0% | |
| ! | AAGAACAACATATACCGACT+AGG | - | chr3.1:89904946-89904965 | MS.gene014451:CDS | 35.0% |
| ! | AAGACATTGGCTAAAAACCA+TGG | + | chr3.1:89905535-89905554 | None:intergenic | 35.0% |
| ! | AGACATTGGCTAAAAACCAT+GGG | + | chr3.1:89905534-89905553 | None:intergenic | 35.0% |
| ! | ATACTGCTTGGACATTCTTT+TGG | - | chr3.1:89902836-89902855 | MS.gene014451:intron | 35.0% |
| ! | ATATATTTTCACAGTTGGGG+CGG | - | chr3.1:89902625-89902644 | MS.gene014451:intron | 35.0% |
| ! | ATCATTGCTGTTGATCAACT+TGG | - | chr3.1:89902519-89902538 | MS.gene014451:intron | 35.0% |
| ! | ATCTGTTTCTTCTGTAAACC+CGG | + | chr3.1:89903037-89903056 | None:intergenic | 35.0% |
| ! | ATTAAGTGTTGTACATGCTC+AGG | + | chr3.1:89903000-89903019 | None:intergenic | 35.0% |
| ! | ATTGCCAAACCTTTGAAGAA+GGG | + | chr3.1:89904606-89904625 | None:intergenic | 35.0% |
| ! | CAGTTTTTCTGATGCATTTG+TGG | - | chr3.1:89904295-89904314 | MS.gene014451:intron | 35.0% |
| ! | GGATGAATTTTTATGACCCT+TGG | - | chr3.1:89903736-89903755 | MS.gene014451:intron | 35.0% |
| ! | GTTTGTTTGTTTGTTAGGAC+TGG | - | chr3.1:89902288-89902307 | MS.gene014451:CDS | 35.0% |
| ! | TCATTGCTGTTGATCAACTT+GGG | - | chr3.1:89902520-89902539 | MS.gene014451:intron | 35.0% |
| ! | TTAAGTGTTGTACATGCTCA+GGG | + | chr3.1:89902999-89903018 | None:intergenic | 35.0% |
| AAAATATGCATCAGGCCGTT+TGG | + | chr3.1:89902958-89902977 | None:intergenic | 40.0% | |
| AAAATTCCTTCCCGATACCA+GGG | + | chr3.1:89904119-89904138 | None:intergenic | 40.0% | |
| AAGTTTCGAGCAACATGGAA+GGG | - | chr3.1:89903078-89903097 | MS.gene014451:intron | 40.0% | |
| AATAGGTTAGTAGCTGCTGA+TGG | - | chr3.1:89904993-89905012 | MS.gene014451:intron | 40.0% | |
| ACCTAGCGCTTGTATATTTG+CGG | + | chr3.1:89904354-89904373 | None:intergenic | 40.0% | |
| AGGTTCTCTTTGTCACTGTT+GGG | - | chr3.1:89903673-89903692 | MS.gene014451:intron | 40.0% | |
| AGTATCAACAAACTGAGGTG+AGG | + | chr3.1:89903325-89903344 | None:intergenic | 40.0% | |
| ATAACAAGCGTAGGAGAATC+AGG | + | chr3.1:89902429-89902448 | None:intergenic | 40.0% | |
| ATAATGCTCCACTGCAATGT+AGG | + | chr3.1:89905250-89905269 | None:intergenic | 40.0% | |
| ATCAAGTCTGCTAACTGGTA+TGG | - | chr3.1:89904414-89904433 | MS.gene014451:intron | 40.0% | |
| ATTAGACAAAACGACGACGT+CGG | - | chr3.1:89902087-89902106 | MS.gene014451:CDS | 40.0% | |
| CAAACATGTAGTTGCCTAGT+CGG | + | chr3.1:89904963-89904982 | None:intergenic | 40.0% | |
| CATATCTATCCTGTATCACC+AGG | - | chr3.1:89905047-89905066 | MS.gene014451:intron | 40.0% | |
| CATTTCCATTCTTACCCAAG+AGG | + | chr3.1:89905375-89905394 | None:intergenic | 40.0% | |
| CTGACCAATTTCATACTGCT+TGG | - | chr3.1:89902824-89902843 | MS.gene014451:intron | 40.0% | |
| GAAAATGAATCTCTTCCCGA+AGG | - | chr3.1:89905885-89905904 | MS.gene014451:CDS | 40.0% | |
| GAATCGCATCTCAAAAAAGC+AGG | + | chr3.1:89904768-89904787 | None:intergenic | 40.0% | |
| GACTAGGCAACTACATGTTT+GGG | - | chr3.1:89904962-89904981 | MS.gene014451:CDS | 40.0% | |
| GAGCCCTTACAAATGATACA+AGG | + | chr3.1:89905208-89905227 | None:intergenic | 40.0% | |
| GAGTAAAGGGAGCAGTAAAT+AGG | - | chr3.1:89905131-89905150 | MS.gene014451:CDS | 40.0% | |
| GATGAATATCTGTGCCTCTT+GGG | - | chr3.1:89905358-89905377 | MS.gene014451:intron | 40.0% | |
| GATGATATGATCGGTTGAAG+TGG | + | chr3.1:89902163-89902182 | None:intergenic | 40.0% | |
| GCGCCTTGTATCATTTGTAA+GGG | - | chr3.1:89905202-89905221 | MS.gene014451:CDS | 40.0% | |
| GTATATTTGCGGACCATGTT+AGG | + | chr3.1:89904343-89904362 | None:intergenic | 40.0% | |
| TAAAAAGTGATTGGCAACCC+AGG | + | chr3.1:89903924-89903943 | None:intergenic | 40.0% | |
| TAAGTTTCGAGCAACATGGA+AGG | - | chr3.1:89903077-89903096 | MS.gene014451:intron | 40.0% | |
| TAATGCTCCACTGCAATGTA+GGG | + | chr3.1:89905249-89905268 | None:intergenic | 40.0% | |
| TAATTACTTCTATCGCAGGC+CGG | - | chr3.1:89905780-89905799 | MS.gene014451:intron | 40.0% | |
| TAGGTTCTCTTTGTCACTGT+TGG | - | chr3.1:89903672-89903691 | MS.gene014451:intron | 40.0% | |
| TATGCCACACCACAAATTCA+AGG | + | chr3.1:89905329-89905348 | None:intergenic | 40.0% | |
| TGATGAATATCTGTGCCTCT+TGG | - | chr3.1:89905357-89905376 | MS.gene014451:intron | 40.0% | |
| TGCAAGAAAGTGATGTAGAG+AGG | + | chr3.1:89905570-89905589 | None:intergenic | 40.0% | |
| TGCGCCTTGTATCATTTGTA+AGG | - | chr3.1:89905201-89905220 | MS.gene014451:CDS | 40.0% | |
| TGTTGATCTTGCAGAAACTG+AGG | - | chr3.1:89902757-89902776 | MS.gene014451:intron | 40.0% | |
| TTCCCATAGATGGTTCAGAA+CGG | + | chr3.1:89903106-89903125 | None:intergenic | 40.0% | |
| TTGACCTTGAATTTGTGGTG+TGG | - | chr3.1:89905322-89905341 | MS.gene014451:CDS | 40.0% | |
| ! | AGGTTTGGTACACATTCAAC+CGG | - | chr3.1:89904370-89904389 | MS.gene014451:intron | 40.0% |
| ! | CTCTTCAATCAGTTTTTGCC+CGG | + | chr3.1:89904392-89904411 | None:intergenic | 40.0% |
| ! | CTGTGTTTTATGCTTGTCGA+AGG | - | chr3.1:89905844-89905863 | MS.gene014451:CDS | 40.0% |
| ! | GATTGCCAAACCTTTGAAGA+AGG | + | chr3.1:89904607-89904626 | None:intergenic | 40.0% |
| ! | GTAACAGTGTTGAGAAAACG+CGG | + | chr3.1:89902393-89902412 | None:intergenic | 40.0% |
| ! | GTTCAAGAGCGTGTTAACAT+AGG | - | chr3.1:89902315-89902334 | MS.gene014451:CDS | 40.0% |
| ! | TGATTCTCCTACGCTTGTTA+TGG | - | chr3.1:89902428-89902447 | MS.gene014451:intron | 40.0% |
| ! | TGTTTCTGTGGAATTAGCCA+TGG | - | chr3.1:89904145-89904164 | MS.gene014451:intron | 40.0% |
| ! | TTGCATTTGGAGCATTTGCT+AGG | - | chr3.1:89904576-89904595 | MS.gene014451:intron | 40.0% |
| ! | TTGCCAAACCTTTGAAGAAG+GGG | + | chr3.1:89904605-89904624 | None:intergenic | 40.0% |
| !! | AAAGCAGGCTCTATTGACTT+CGG | + | chr3.1:89904753-89904772 | None:intergenic | 40.0% |
| !! | AACCATCTAACTTTAGAGCC+AGG | + | chr3.1:89902351-89902370 | None:intergenic | 40.0% |
| !! | AGCAATGATTCTGAAACGAG+AGG | + | chr3.1:89902508-89902527 | None:intergenic | 40.0% |
| AATCACCAATCCCTGGTATC+GGG | - | chr3.1:89904106-89904125 | MS.gene014451:intron | 45.0% | |
| AATGCATTTCGCACGAGTTC+AGG | - | chr3.1:89903498-89903517 | MS.gene014451:intron | 45.0% | |
| AGAAGCTCGCAAGCATATGA+AGG | - | chr3.1:89905663-89905682 | MS.gene014451:CDS | 45.0% | |
| ATCTTGCAGAAACTGAGGCA+TGG | - | chr3.1:89902762-89902781 | MS.gene014451:intron | 45.0% | |
| ATGCCCCTTCTTCAAAGGTT+TGG | - | chr3.1:89904599-89904618 | MS.gene014451:intron | 45.0% | |
| CAAATTCAAGGTCAACTCCC+TGG | + | chr3.1:89905317-89905336 | None:intergenic | 45.0% | |
| CATATGCTTGCGAGCTTCTT+GGG | + | chr3.1:89905662-89905681 | None:intergenic | 45.0% | |
| CCATGAACCATAACAAGCGT+AGG | + | chr3.1:89902438-89902457 | None:intergenic | 45.0% | |
| CGACTAGGCAACTACATGTT+TGG | - | chr3.1:89904961-89904980 | MS.gene014451:CDS | 45.0% | |
| CGAGTTCAGGTCAATAATGC+TGG | - | chr3.1:89903511-89903530 | MS.gene014451:intron | 45.0% | |
| CGGGCAAAAACTGATTGAAG+AGG | - | chr3.1:89904390-89904409 | MS.gene014451:intron | 45.0% | |
| CTGTGGAATTAGCCATGGAA+AGG | - | chr3.1:89904150-89904169 | MS.gene014451:intron | 45.0% | |
| GAAAATTCCTTCCCGATACC+AGG | + | chr3.1:89904120-89904139 | None:intergenic | 45.0% | |
| GAAAGTGATGTAGAGAGGTG+AGG | + | chr3.1:89905565-89905584 | None:intergenic | 45.0% | |
| GAATCACCAATCCCTGGTAT+CGG | - | chr3.1:89904105-89904124 | MS.gene014451:intron | 45.0% | |
| GAGAACCTAAGTCAGTCTGT+CGG | + | chr3.1:89903661-89903680 | None:intergenic | 45.0% | |
| GAGCGTGTTAACATAGGTTC+TGG | - | chr3.1:89902321-89902340 | MS.gene014451:CDS | 45.0% | |
| GAGGAATCAAGTCTGCTAAC+TGG | - | chr3.1:89904409-89904428 | MS.gene014451:intron | 45.0% | |
| GGGACCCTGATAATTTCACA+TGG | + | chr3.1:89905691-89905710 | None:intergenic | 45.0% | |
| GGGAGTTGACCTTGAATTTG+TGG | - | chr3.1:89905317-89905336 | MS.gene014451:CDS | 45.0% | |
| GTAAGGGTGATTCCTTTCCA+TGG | + | chr3.1:89904165-89904184 | None:intergenic | 45.0% | |
| GTGACCTCTTAGTCACATGA+AGG | + | chr3.1:89903791-89903810 | None:intergenic | 45.0% | |
| GTGAGGCCTTAACAAGACAT+TGG | + | chr3.1:89905548-89905567 | None:intergenic | 45.0% | |
| GTGCCCACCACATTCATATA+TGG | - | chr3.1:89905607-89905626 | MS.gene014451:CDS | 45.0% | |
| GTGTTCATTGACAACCCAAG+TGG | - | chr3.1:89905810-89905829 | MS.gene014451:CDS | 45.0% | |
| GTTGCCTTCATGTGACTAAG+AGG | - | chr3.1:89903784-89903803 | MS.gene014451:intron | 45.0% | |
| TCATATGCTTGCGAGCTTCT+TGG | + | chr3.1:89905663-89905682 | None:intergenic | 45.0% | |
| TCCGCAAATATACAAGCGCT+AGG | - | chr3.1:89904350-89904369 | MS.gene014451:intron | 45.0% | |
| TGAAATTATCAGGGTCCCTC+AGG | - | chr3.1:89905693-89905712 | MS.gene014451:intron | 45.0% | |
| TGCAATGTAGGGAAGACCTT+GGG | + | chr3.1:89905238-89905257 | None:intergenic | 45.0% | |
| TGCATTTGTGGCAGAGGTTT+AGG | - | chr3.1:89904307-89904326 | MS.gene014451:intron | 45.0% | |
| TGTGACTAAGAGGTCACAAG+TGG | - | chr3.1:89903794-89903813 | MS.gene014451:intron | 45.0% | |
| TTCTGATGCATTTGTGGCAG+AGG | - | chr3.1:89904301-89904320 | MS.gene014451:intron | 45.0% | |
| ! | AGCCGTTCTGAACCATCTAT+GGG | - | chr3.1:89903101-89903120 | MS.gene014451:intron | 45.0% |
| ! | ATCCTGATTTCTGAGGGGAA+TGG | - | chr3.1:89905089-89905108 | MS.gene014451:intron | 45.0% |
| ! | ATTGGTGATTCCATGCTTCG+TGG | + | chr3.1:89904096-89904115 | None:intergenic | 45.0% |
| ! | CTGCTTGGACATTCTTTTGG+TGG | - | chr3.1:89902839-89902858 | MS.gene014451:intron | 45.0% |
| ! | GGTTTGGTACACATTCAACC+GGG | - | chr3.1:89904371-89904390 | MS.gene014451:intron | 45.0% |
| ! | TGATTTCTGAGGGGAATGGT+GGG | - | chr3.1:89905093-89905112 | MS.gene014451:intron | 45.0% |
| !! | CATCTAACTTTAGAGCCAGG+AGG | + | chr3.1:89902348-89902367 | None:intergenic | 45.0% |
| !! | CCTACGCTTGTTATGGTTCA+TGG | - | chr3.1:89902435-89902454 | MS.gene014451:intron | 45.0% |
| !! | CTCCTGGCTCTAAAGTTAGA+TGG | - | chr3.1:89902346-89902365 | MS.gene014451:CDS | 45.0% |
| !! | TTAATTTTGGTGGGACCTGC+CGG | - | chr3.1:89903015-89903034 | MS.gene014451:intron | 45.0% |
| !!! | TTATTTTAAATTTTAAGATT+AGG | + | chr3.1:89903439-89903458 | None:intergenic | 5.0% |
| ACAGCTGAATGGAAGCCACT+TGG | + | chr3.1:89905828-89905847 | None:intergenic | 50.0% | |
| ACATGTGCTCCTGGTGATAC+AGG | + | chr3.1:89905059-89905078 | None:intergenic | 50.0% | |
| ACTGACCTTGAGCGCGTATT+TGG | + | chr3.1:89902876-89902895 | None:intergenic | 50.0% | |
| AGCATGGAATCACCAATCCC+TGG | - | chr3.1:89904099-89904118 | MS.gene014451:intron | 50.0% | |
| AGGTCTTCCCTACATTGCAG+TGG | - | chr3.1:89905239-89905258 | MS.gene014451:intron | 50.0% | |
| AGTCAATAGGAGTGGGCAAG+TGG | + | chr3.1:89904863-89904882 | None:intergenic | 50.0% | |
| CACAAGTGGTAAGACTGCCT+GGG | - | chr3.1:89903808-89903827 | MS.gene014451:intron | 50.0% | |
| CACCATTCCCCTCAGAAATC+AGG | + | chr3.1:89905094-89905113 | None:intergenic | 50.0% | |
| CAGCTGAATGGAAGCCACTT+GGG | + | chr3.1:89905827-89905846 | None:intergenic | 50.0% | |
| CATGGATACGCTGCTTCTCA+GGG | - | chr3.1:89902453-89902472 | MS.gene014451:intron | 50.0% | |
| CCCTCAGAAATCAGGATGCA+CGG | + | chr3.1:89905086-89905105 | None:intergenic | 50.0% | |
| CCGTGCATCCTGATTTCTGA+GGG | - | chr3.1:89905083-89905102 | MS.gene014451:intron | 50.0% | |
| CGGTTGAAGTGGGAATCCAA+CGG | + | chr3.1:89902152-89902171 | None:intergenic | 50.0% | |
| CGTGCATCCTGATTTCTGAG+GGG | - | chr3.1:89905084-89905103 | MS.gene014451:intron | 50.0% | |
| CTAAGCAGACGATAGCCCTT+CGG | + | chr3.1:89905904-89905923 | None:intergenic | 50.0% | |
| CTAGGATGCCCCTTCTTCAA+AGG | - | chr3.1:89904594-89904613 | MS.gene014451:intron | 50.0% | |
| CTCAGCGGCGATGATATGAT+CGG | + | chr3.1:89902172-89902191 | None:intergenic | 50.0% | |
| CTGCAATGTAGGGAAGACCT+TGG | + | chr3.1:89905239-89905258 | None:intergenic | 50.0% | |
| CTGTGCCTCTTGGGTAAGAA+TGG | - | chr3.1:89905367-89905386 | MS.gene014451:intron | 50.0% | |
| GCAATGTAGGGAAGACCTTG+GGG | + | chr3.1:89905237-89905256 | None:intergenic | 50.0% | |
| GTTTCTTCTGTAAACCCGGC+AGG | + | chr3.1:89903033-89903052 | None:intergenic | 50.0% | |
| TAAGCAGACGATAGCCCTTC+GGG | + | chr3.1:89905903-89905922 | None:intergenic | 50.0% | |
| TAAGGGCTCTTTAAGCCCCA+AGG | - | chr3.1:89905219-89905238 | MS.gene014451:intron | 50.0% | |
| TCACAAGTGGTAAGACTGCC+TGG | - | chr3.1:89903807-89903826 | MS.gene014451:intron | 50.0% | |
| TCATGGATACGCTGCTTCTC+AGG | - | chr3.1:89902452-89902471 | MS.gene014451:intron | 50.0% | |
| TCCGTGCATCCTGATTTCTG+AGG | - | chr3.1:89905082-89905101 | MS.gene014451:intron | 50.0% | |
| TGCTTCCAAATACGCGCTCA+AGG | - | chr3.1:89902868-89902887 | MS.gene014451:intron | 50.0% | |
| TGGCAGAGGTTTAGGTCCTT+GGG | - | chr3.1:89904315-89904334 | MS.gene014451:intron | 50.0% | |
| TTTCTTGCAGTGCTCCAGAG+TGG | - | chr3.1:89905581-89905600 | MS.gene014451:CDS | 50.0% | |
| ! | AACATAGGTTCTGGTCCTCC+TGG | - | chr3.1:89902330-89902349 | MS.gene014451:CDS | 50.0% |
| ! | AAGCAGAAGGAGCTTGTTCC+TGG | - | chr3.1:89903903-89903922 | MS.gene014451:intron | 50.0% |
| ! | AGCAGAAGGAGCTTGTTCCT+GGG | - | chr3.1:89903904-89903923 | MS.gene014451:intron | 50.0% |
| ! | CTGATTTCTGAGGGGAATGG+TGG | - | chr3.1:89905092-89905111 | MS.gene014451:intron | 50.0% |
| ! | GAGCCGTTCTGAACCATCTA+TGG | - | chr3.1:89903100-89903119 | MS.gene014451:intron | 50.0% |
| ! | GATTTCTGAGGGGAATGGTG+GGG | - | chr3.1:89905094-89905113 | MS.gene014451:intron | 50.0% |
| ! | GTAGACCGACAGACTGACTT+AGG | - | chr3.1:89903653-89903672 | MS.gene014451:CDS | 50.0% |
| !! | GGAAAGAAGGCGTTTCTCAG+CGG | + | chr3.1:89902187-89902206 | None:intergenic | 50.0% |
| !! | TAATTTTGGTGGGACCTGCC+GGG | - | chr3.1:89903016-89903035 | MS.gene014451:intron | 50.0% |
| ACATTGGCGGCCAAAGCTAG+TGG | - | chr3.1:89904530-89904549 | MS.gene014451:intron | 55.0% | |
| AGGTCCTTGGGGTCCTAACA+TGG | - | chr3.1:89904327-89904346 | MS.gene014451:intron | 55.0% | |
| ATTGGCGGCCAAAGCTAGTG+GGG | - | chr3.1:89904532-89904551 | MS.gene014451:intron | 55.0% | |
| CATTGGCGGCCAAAGCTAGT+GGG | - | chr3.1:89904531-89904550 | MS.gene014451:intron | 55.0% | |
| CCACGGAAGAATCCTTTCCC+AGG | + | chr3.1:89903828-89903847 | None:intergenic | 55.0% | |
| CCTGGGAAAGGATTCTTCCG+TGG | - | chr3.1:89903825-89903844 | MS.gene014451:intron | 55.0% | |
| GAGAAAACGCGGCTCGTTAC+TGG | + | chr3.1:89902382-89902401 | None:intergenic | 55.0% | |
| GGCAGAGGTTTAGGTCCTTG+GGG | - | chr3.1:89904316-89904335 | MS.gene014451:intron | 55.0% | |
| GTGGCAGAGGTTTAGGTCCT+TGG | - | chr3.1:89904314-89904333 | MS.gene014451:intron | 55.0% | |
| GTGGTAAGACTGCCTGGGAA+AGG | - | chr3.1:89903813-89903832 | MS.gene014451:intron | 55.0% | |
| TCCTTCCCGATACCAGGGAT+TGG | + | chr3.1:89904114-89904133 | None:intergenic | 55.0% | |
| ! | ACACAGCTCCCCACTAGCTT+TGG | + | chr3.1:89904543-89904562 | None:intergenic | 55.0% |
| ! | ACCAATCCCTGGTATCGGGA+AGG | - | chr3.1:89904110-89904129 | MS.gene014451:intron | 55.0% |
| ! | GCGGCTCGTTACTGGTTGAA+CGG | + | chr3.1:89902374-89902393 | None:intergenic | 55.0% |
| ! | GCTTCTGGTCTTCACTCCGT+TGG | - | chr3.1:89902133-89902152 | MS.gene014451:CDS | 55.0% |
| ACTGTGGGGAGGGGGAGTAA+AGG | - | chr3.1:89905117-89905136 | MS.gene014451:CDS | 60.0% | |
| CACGGATGCACATGTGCTCC+TGG | + | chr3.1:89905068-89905087 | None:intergenic | 60.0% | |
| CGGACCATGTTAGGACCCCA+AGG | + | chr3.1:89904334-89904353 | None:intergenic | 60.0% | |
| CTGTGGGGAGGGGGAGTAAA+GGG | - | chr3.1:89905118-89905137 | MS.gene014451:CDS | 60.0% | |
| ! | AATGGTGGGGACTGTGGGGA+GGG | - | chr3.1:89905107-89905126 | MS.gene014451:intron | 60.0% |
| ! | AGGGGAATGGTGGGGACTGT+GGG | - | chr3.1:89905102-89905121 | MS.gene014451:intron | 60.0% |
| !! | GTGGTGGGCACTTTCCACTC+TGG | + | chr3.1:89905598-89905617 | None:intergenic | 60.0% |
| ! | ATGGTGGGGACTGTGGGGAG+GGG | - | chr3.1:89905108-89905127 | MS.gene014451:intron | 65.0% |
| ! | GAATGGTGGGGACTGTGGGG+AGG | - | chr3.1:89905106-89905125 | MS.gene014451:intron | 65.0% |
| ! | GAGGGGAATGGTGGGGACTG+TGG | - | chr3.1:89905101-89905120 | MS.gene014451:intron | 65.0% |
| ! | GGGGAATGGTGGGGACTGTG+GGG | - | chr3.1:89905103-89905122 | MS.gene014451:intron | 65.0% |
| TGGTGGGGACTGTGGGGAGG+GGG | - | chr3.1:89905109-89905128 | MS.gene014451:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 89902075 | 89905923 | 89902075 | ID=MS.gene014451 |
| chr3.1 | mRNA | 89902075 | 89905923 | 89902075 | ID=MS.gene014451.t1;Parent=MS.gene014451 |
| chr3.1 | exon | 89905784 | 89905923 | 89905784 | ID=MS.gene014451.t1.exon1;Parent=MS.gene014451.t1 |
| chr3.1 | CDS | 89905784 | 89905923 | 89905784 | ID=cds.MS.gene014451.t1;Parent=MS.gene014451.t1 |
| chr3.1 | exon | 89905457 | 89905693 | 89905457 | ID=MS.gene014451.t1.exon2;Parent=MS.gene014451.t1 |
| chr3.1 | CDS | 89905457 | 89905693 | 89905457 | ID=cds.MS.gene014451.t1;Parent=MS.gene014451.t1 |
| chr3.1 | exon | 89905313 | 89905359 | 89905313 | ID=MS.gene014451.t1.exon3;Parent=MS.gene014451.t1 |
| chr3.1 | CDS | 89905313 | 89905359 | 89905313 | ID=cds.MS.gene014451.t1;Parent=MS.gene014451.t1 |
| chr3.1 | exon | 89905109 | 89905227 | 89905109 | ID=MS.gene014451.t1.exon4;Parent=MS.gene014451.t1 |
| chr3.1 | CDS | 89905109 | 89905227 | 89905109 | ID=cds.MS.gene014451.t1;Parent=MS.gene014451.t1 |
| chr3.1 | exon | 89904844 | 89905004 | 89904844 | ID=MS.gene014451.t1.exon5;Parent=MS.gene014451.t1 |
| chr3.1 | CDS | 89904844 | 89905004 | 89904844 | ID=cds.MS.gene014451.t1;Parent=MS.gene014451.t1 |
| chr3.1 | exon | 89903568 | 89903677 | 89903568 | ID=MS.gene014451.t1.exon6;Parent=MS.gene014451.t1 |
| chr3.1 | CDS | 89903568 | 89903677 | 89903568 | ID=cds.MS.gene014451.t1;Parent=MS.gene014451.t1 |
| chr3.1 | exon | 89903383 | 89903482 | 89903383 | ID=MS.gene014451.t1.exon7;Parent=MS.gene014451.t1 |
| chr3.1 | CDS | 89903383 | 89903482 | 89903383 | ID=cds.MS.gene014451.t1;Parent=MS.gene014451.t1 |
| chr3.1 | exon | 89902284 | 89902407 | 89902284 | ID=MS.gene014451.t1.exon8;Parent=MS.gene014451.t1 |
| chr3.1 | CDS | 89902284 | 89902407 | 89902284 | ID=cds.MS.gene014451.t1;Parent=MS.gene014451.t1 |
| chr3.1 | exon | 89902075 | 89902200 | 89902075 | ID=MS.gene014451.t1.exon9;Parent=MS.gene014451.t1 |
| chr3.1 | CDS | 89902075 | 89902200 | 89902075 | ID=cds.MS.gene014451.t1;Parent=MS.gene014451.t1 |
| Gene Sequence |
| Protein sequence |
