AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene014834

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014834.t1 MTR_3g107280 97.111 623 18 0 1 623 19 641 0.0 1210
MS.gene014834.t1 MTR_1g012520 67.305 627 199 2 1 622 17 642 0.0 839
MS.gene014834.t1 MTR_4g114640 54.833 600 267 3 26 622 34 632 0.0 598
MS.gene014834.t1 MTR_4g114650 50.580 603 257 5 26 623 37 603 0.0 546
MS.gene014834.t1 MTR_4g114650 50.580 603 257 5 26 623 88 654 0.0 546
MS.gene014834.t1 MTR_4g114650 50.580 603 257 5 26 623 33 599 0.0 546
MS.gene014834.t1 MTR_2g021030 27.966 590 371 22 53 613 11 575 2.55e-34 138
MS.gene014834.t1 MTR_2g021030 26.667 270 177 5 125 388 334 588 3.79e-20 95.1
MS.gene014834.t1 MTR_4g013255 26.995 589 354 21 40 587 46 599 1.32e-27 118
MS.gene014834.t1 MTR_4g013255 25.153 326 209 8 156 481 320 610 1.75e-20 96.3
MS.gene014834.t1 MTR_1g114610 26.531 392 262 11 51 427 18 398 1.99e-26 112
MS.gene014834.t1 MTR_1g114610 23.423 333 223 5 286 616 95 397 3.21e-15 78.6
MS.gene014834.t1 MTR_2g021030 27.358 424 259 16 53 448 11 413 3.51e-24 106
MS.gene014834.t1 MTR_2g021030 25.786 318 204 9 312 604 127 437 5.49e-20 93.6
MS.gene014834.t1 MTR_2g021030 26.160 237 145 5 156 392 231 437 2.87e-16 82.0
MS.gene014834.t1 MTR_2g021030 35.652 115 74 0 154 268 305 419 2.90e-15 79.0
MS.gene014834.t1 MTR_7g112570 25.909 440 288 13 151 577 190 604 9.10e-24 106
MS.gene014834.t1 MTR_7g112570 24.949 489 278 15 171 605 78 531 2.93e-20 95.5
MS.gene014834.t1 MTR_7g112570 26.682 431 276 12 151 553 190 608 9.87e-24 106
MS.gene014834.t1 MTR_7g112570 24.949 489 278 15 171 605 78 531 2.41e-20 95.9
MS.gene014834.t1 MTR_7g112570 23.611 288 188 5 154 441 399 654 4.17e-15 79.3
MS.gene014834.t1 MTR_7g112570 26.303 422 276 12 151 559 190 589 2.20e-23 105
MS.gene014834.t1 MTR_7g112570 24.949 489 278 15 171 605 78 531 3.22e-20 95.1
MS.gene014834.t1 MTR_8g028140 27.273 374 242 8 48 405 17 376 2.90e-20 94.0
MS.gene014834.t1 MTR_8g028140 28.777 278 172 6 141 405 32 296 2.75e-19 89.7
MS.gene014834.t1 MTR_8g028140 24.013 304 180 7 248 531 16 288 6.79e-11 64.3
MS.gene014834.t1 MTR_1g054625 29.960 247 156 9 325 567 107 340 2.28e-18 87.4
MS.gene014834.t1 MTR_1g054625 26.829 205 138 4 154 354 120 316 1.01e-13 73.6
MS.gene014834.t1 MTR_1g054625 25.610 246 164 5 154 389 90 326 2.07e-12 69.3
MS.gene014834.t1 MTR_4g019320 20.755 424 292 8 160 559 122 525 2.00e-16 83.2
MS.gene014834.t1 MTR_3g088895 25.926 216 107 3 178 393 111 273 3.54e-16 80.9
MS.gene014834.t1 MTR_4g009030 24.823 423 275 15 155 553 127 530 4.58e-16 82.0
MS.gene014834.t1 MTR_4g009030 22.393 585 362 20 50 615 3 514 2.11e-13 73.6
MS.gene014834.t1 MTR_1g029500 23.404 282 147 4 178 443 98 326 2.29e-15 78.6
MS.gene014834.t1 MTR_1g029500 31.507 146 73 3 123 244 127 269 8.21e-12 67.4
MS.gene014834.t1 MTR_1g015450 24.471 425 251 15 156 562 327 699 4.45e-15 79.3
MS.gene014834.t1 MTR_1g015480 23.227 409 252 14 168 562 157 517 1.59e-14 77.4
MS.gene014834.t1 MTR_1g054625 26.941 219 146 5 142 354 9 219 2.51e-14 73.6
MS.gene014834.t1 MTR_1g054625 27.106 273 162 7 329 598 14 252 3.48e-14 73.2
MS.gene014834.t1 MTR_1g054625 24.675 231 160 4 276 499 9 232 6.20e-11 63.5
MS.gene014834.t1 MTR_1g018790 25.620 363 198 14 207 562 137 434 8.80e-13 71.6
MS.gene014834.t1 MTR_4g130620 30.168 179 109 5 209 385 102 266 1.07e-12 69.7
MS.gene014834.t1 MTR_5g095830 22.440 459 268 13 160 575 149 562 4.01e-12 69.7
MS.gene014834.t1 MTR_4g133640 21.542 441 290 11 160 558 135 561 3.99e-11 66.2
MS.gene014834.t1 MTR_4g133640 23.892 406 239 15 142 499 172 555 8.19e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014834.t1 AT2G25490 57.051 624 251 6 1 622 19 627 0.0 660
MS.gene014834.t1 AT5G25350 53.247 616 275 7 10 623 19 623 0.0 595
MS.gene014834.t1 AT4G15475 27.663 582 380 19 53 623 11 562 3.01e-46 173
MS.gene014834.t1 AT4G15475 27.762 353 247 6 156 508 231 575 9.25e-32 130
MS.gene014834.t1 AT4G15475 26.686 341 239 6 105 440 252 586 6.20e-30 125
MS.gene014834.t1 AT4G15475 27.211 294 192 6 107 388 305 588 6.44e-22 100
MS.gene014834.t1 AT5G27920 29.083 447 275 16 155 586 158 577 8.83e-29 122
MS.gene014834.t1 AT5G27920 25.381 394 251 13 247 609 65 446 3.19e-11 67.0
MS.gene014834.t1 AT5G23340 28.520 277 190 6 286 559 85 356 5.36e-24 105
MS.gene014834.t1 AT5G23340 25.199 377 256 13 51 415 8 370 2.61e-21 97.1
MS.gene014834.t1 AT5G23340 25.442 283 181 3 331 612 76 329 3.90e-16 81.3
MS.gene014834.t1 AT5G23340 29.213 178 123 3 438 614 103 278 3.21e-14 75.5
MS.gene014834.t1 AT5G01720 22.980 396 250 6 158 530 241 604 2.34e-22 102
MS.gene014834.t1 AT5G01720 25.887 479 311 15 156 605 85 548 2.90e-18 89.4
MS.gene014834.t1 AT5G01720 22.963 270 174 6 155 397 315 577 5.10e-15 79.0
MS.gene014834.t1 AT1G21410 24.537 216 110 2 178 393 100 262 2.58e-15 78.6
MS.gene014834.t1 AT1G21410 21.399 243 172 3 142 367 92 332 4.02e-11 65.5
MS.gene014834.t1 AT1G21410 24.537 216 110 2 178 393 100 262 2.58e-15 78.6
MS.gene014834.t1 AT1G21410 21.399 243 172 3 142 367 92 332 4.02e-11 65.5
MS.gene014834.t1 AT1G77000 25.000 216 109 2 178 393 100 262 2.80e-15 78.2
MS.gene014834.t1 AT1G77000 24.348 230 155 5 156 367 104 332 1.24e-11 67.0
MS.gene014834.t1 AT1G77000 25.000 216 109 2 178 393 100 262 2.80e-15 78.2
MS.gene014834.t1 AT1G77000 24.348 230 155 5 156 367 104 332 1.24e-11 67.0
MS.gene014834.t1 AT1G55590 23.767 223 165 3 154 374 296 515 1.93e-14 77.0
MS.gene014834.t1 AT1G55590 24.486 486 304 20 163 614 35 491 4.72e-11 66.2
MS.gene014834.t1 AT1G47056 34.659 176 98 8 99 268 244 408 5.54e-14 75.5
MS.gene014834.t1 AT1G47056 27.247 356 173 12 233 562 116 411 2.87e-12 70.1
MS.gene014834.t1 AT3G07550 25.193 389 242 9 43 405 8 373 1.96e-13 72.8
MS.gene014834.t1 AT3G07550 25.193 389 242 9 43 405 8 373 1.96e-13 72.8
MS.gene014834.t1 AT4G33210 23.650 537 298 19 110 598 321 793 2.26e-13 73.9
MS.gene014834.t1 AT3G58530 23.554 242 147 4 134 375 102 305 1.17e-12 70.1
MS.gene014834.t1 AT3G58530 26.119 268 161 7 325 589 109 342 2.41e-12 69.3
MS.gene014834.t1 AT4G07400 34.074 135 61 3 157 264 330 463 7.24e-12 68.6
MS.gene014834.t1 AT3G07550 24.936 389 216 11 43 405 8 346 1.64e-11 66.6
MS.gene014834.t1 AT1G80630 23.192 401 237 13 180 549 148 508 6.48e-11 65.9

Find 161 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTGAAGTCTTTCACTCTT+TGG 0.100387 3.3:-87807126 MS.gene014834:CDS
GACAGTGACAATCAAGAATT+TGG 0.176892 3.3:-87807328 MS.gene014834:CDS
GATTACTCACTAGCAGTTAT+TGG 0.193905 3.3:-87806773 MS.gene014834:CDS
TGACATTTGGGAGGAAATTT+AGG 0.202479 3.3:+87806720 None:intergenic
TGCCATAGGATTACCCAATT+TGG 0.212481 3.3:-87806470 MS.gene014834:CDS
TGACACCGGCAACCCCAAAT+TGG 0.224942 3.3:+87806456 None:intergenic
TCTGAAGTCTTTCACTCTTT+GGG 0.233451 3.3:-87807125 MS.gene014834:CDS
CAATCTGGATGTACTTTCTT+TGG 0.236470 3.3:-87805940 MS.gene014834:CDS
CTTGGAGTGCTAAACCTTAA+TGG 0.242738 3.3:-87806092 MS.gene014834:CDS
TCGAAGCTTGGAGGGGAAAA+AGG 0.250888 3.3:-87807287 MS.gene014834:CDS
GTTGCTGCAGATTTCATTCT+TGG 0.268042 3.3:+87807369 None:intergenic
GCCATAGGATTACCCAATTT+GGG 0.271797 3.3:-87806469 MS.gene014834:CDS
GTCCTTCAGGCAACCTTCTA+AGG 0.271825 3.3:+87807452 None:intergenic
TGCCCTGGAGTAACAGATAT+TGG 0.295544 3.3:-87806626 MS.gene014834:CDS
ACACAATCTCGAGGAGGATT+AGG 0.296188 3.3:-87807229 MS.gene014834:CDS
AAACCTTAATGGTTGTAAAA+AGG 0.296888 3.3:-87806081 MS.gene014834:CDS
ATCTGCAGCAACGCAAGTTC+TGG 0.320573 3.3:-87807358 MS.gene014834:CDS
TAATGGATGCTGAACATAAA+AGG 0.320702 3.3:+87806834 None:intergenic
AATGAAGGTCTACATGCTAT+TGG 0.322984 3.3:-87806929 MS.gene014834:CDS
ATTGATACGGACCTTAGATT+TGG 0.325991 3.3:+87806896 None:intergenic
TTCACTGCTTCAGAGGTCTA+AGG 0.330025 3.3:-87806201 MS.gene014834:CDS
CTTCAATGTCTTGAATTGAT+TGG 0.331320 3.3:-87806254 MS.gene014834:CDS
CAACTAACGTCGCTCACAAT+TGG 0.335014 3.3:-87806653 MS.gene014834:CDS
AATCCTTTCTCAGTGACATT+TGG 0.339180 3.3:+87806707 None:intergenic
ATCCTTTCTCAGTGACATTT+GGG 0.343384 3.3:+87806708 None:intergenic
AATTGTAGGCTCACAATTGA+TGG 0.346716 3.3:+87806500 None:intergenic
TCAGAGGTCTAAGGCCAGTT+TGG 0.348388 3.3:-87806192 MS.gene014834:CDS
TTCTTTGGCAGGTTGCTCAT+TGG 0.352209 3.3:-87805925 MS.gene014834:CDS
ATGTCACTGAGAAAGGATTC+TGG 0.353390 3.3:-87806703 MS.gene014834:CDS
ATTACCCAATTTGGGGTTGC+CGG 0.354313 3.3:-87806461 MS.gene014834:CDS
TAGATTAACATTACCCAAAC+TGG 0.367200 3.3:+87806178 None:intergenic
TTAGGGAAGCTTTCAATTCA+TGG 0.367968 3.3:-87807211 MS.gene014834:CDS
CTCCCAAATGTCACTGAGAA+AGG 0.373961 3.3:-87806710 MS.gene014834:CDS
CTAGCAGTTATTGGACAATA+TGG 0.374694 3.3:-87806764 MS.gene014834:CDS
AAACTCCTATCTTGTCCTTC+AGG 0.378407 3.3:+87807439 None:intergenic
AGAAGAGACCCGCCTCCTTC+GGG 0.379204 3.3:+87807623 None:intergenic
CTCACAATTGGGCTGTGCCC+TGG 0.383441 3.3:-87806641 MS.gene014834:CDS
AAGTTGCATTGTTCGACTCT+TGG 0.384757 3.3:-87806110 MS.gene014834:CDS
GACCCGCCTCCTTCGGGTTA+AGG 0.385671 3.3:+87807629 None:intergenic
GCGGGTCTCTTCTTGTCTCT+TGG 0.388125 3.3:-87807613 MS.gene014834:CDS
CAGAGGTCTAAGGCCAGTTT+GGG 0.390240 3.3:-87806191 MS.gene014834:CDS
GCCCTGGAGTAACAGATATT+GGG 0.394824 3.3:-87806625 MS.gene014834:CDS
GCCTCTTTGAGATCCTTAGA+AGG 0.399791 3.3:-87807465 MS.gene014834:CDS
CTGTCCTGGAGTTCGTGATC+AGG 0.403623 3.3:-87806867 MS.gene014834:CDS
CTTGAATTGATTGGACTTGA+GGG 0.404075 3.3:-87806245 MS.gene014834:CDS
CACAATCTCGAGGAGGATTA+GGG 0.405866 3.3:-87807228 MS.gene014834:CDS
CTGGATGTACTTTCTTTGGC+AGG 0.406723 3.3:-87805936 MS.gene014834:CDS
AAGAAGAGACCCGCCTCCTT+CGG 0.411237 3.3:+87807622 None:intergenic
ATCAATTGTGAGCCTACAAT+TGG 0.415296 3.3:-87806498 MS.gene014834:CDS
TACCAACTCCAGGGCAGTTA+CGG 0.416240 3.3:+87806315 None:intergenic
AAAATTGAAGGCTCTTACTC+TGG 0.417528 3.3:-87806417 MS.gene014834:CDS
ACAGTGACAATCAAGAATTT+GGG 0.418150 3.3:-87807327 MS.gene014834:CDS
TATGGCACTCTTCCAATTGT+AGG 0.418212 3.3:+87806486 None:intergenic
GGAAGTTGTGTCCAAATCTA+AGG 0.431749 3.3:-87806907 MS.gene014834:CDS
CACAATTGATGGAGCAGCCT+TGG 0.432002 3.3:+87806511 None:intergenic
AACTAACGTCGCTCACAATT+GGG 0.438220 3.3:-87806652 MS.gene014834:CDS
CTTACTCTGGTAAGCTGCTA+CGG 0.439956 3.3:-87806404 MS.gene014834:CDS
ACAAGCTTGTGGAACATCTC+TGG 0.440119 3.3:-87805806 MS.gene014834:CDS
ATGAAGGTCTACATGCTATT+GGG 0.440822 3.3:-87806928 MS.gene014834:CDS
GTTCGTGATCAGGGAATTGC+TGG 0.441466 3.3:-87806857 MS.gene014834:CDS
ACATCAGTCAAGGCACGATC+TGG 0.441521 3.3:+87807181 None:intergenic
AGGATTCTGGGTGATGGGTA+AGG 0.443167 3.3:-87806690 MS.gene014834:CDS
GGCTTGATCGAGATTGCTAA+TGG 0.449362 3.3:-87807079 MS.gene014834:CDS
TGCATCGGTGATTGCACACT+CGG 0.454668 3.3:+87805995 None:intergenic
GATCAAGCCTTCGTCACTAA+TGG 0.455417 3.3:+87807093 None:intergenic
ATCGATAACTCAGTCAGATT+CGG 0.457316 3.3:+87806974 None:intergenic
AAACCGTGGTGCAAAATTGA+AGG 0.459034 3.3:-87806429 MS.gene014834:CDS
TGAACAGGACTCCACGAGTA+AGG 0.461905 3.3:+87805961 None:intergenic
GAGTGTGCAATCACCGATGC+AGG 0.462800 3.3:-87805993 MS.gene014834:CDS
GACACCGGCAACCCCAAATT+GGG 0.463002 3.3:+87806457 None:intergenic
ATCTCAAAGAGGCATTCATC+AGG 0.464081 3.3:+87807475 None:intergenic
TCGTGGAGTCCTGTTCAATC+TGG 0.467985 3.3:-87805955 MS.gene014834:CDS
TATTGGACAATATGGCTTTG+TGG 0.469637 3.3:-87806756 MS.gene014834:CDS
AATCAAGAATTTGGGGATGA+AGG 0.470048 3.3:-87807319 MS.gene014834:CDS
GGTTGCCTGAAGGACAAGAT+AGG 0.472680 3.3:-87807444 MS.gene014834:CDS
AGCCCAATATCTGTTACTCC+AGG 0.474848 3.3:+87806623 None:intergenic
AATGTCCCATTTGACTTCAG+TGG 0.477222 3.3:-87807544 MS.gene014834:CDS
TTTCTCCACTGAAGTCAAAT+GGG 0.478494 3.3:+87807539 None:intergenic
AGGCTATCTTTCTCGAAGCT+TGG 0.481683 3.3:-87807299 MS.gene014834:CDS
GTGCTTCTGTATCCAAGCGC+TGG 0.487434 3.3:-87807414 MS.gene014834:CDS
TTATCAATCCGTAACTGCCC+TGG 0.487556 3.3:-87806323 MS.gene014834:CDS
TGTCACTGAGAAAGGATTCT+GGG 0.488123 3.3:-87806702 MS.gene014834:CDS
TTGGGTAATGTTAATCTAAG+TGG 0.488310 3.3:-87806173 MS.gene014834:CDS
AAAGTACATCCAGATTGAAC+AGG 0.488581 3.3:+87805946 None:intergenic
GTCTGTATGCATATTCTTGA+CGG 0.489813 3.3:+87807590 None:intergenic
ACGTTAGTTGCTGCAGTGCA+TGG 0.490237 3.3:+87806666 None:intergenic
GGCCTCAAGGCAGTTGCTCA+TGG 0.491162 3.3:-87807157 MS.gene014834:CDS
CTATCTTTCTCGAAGCTTGG+AGG 0.492264 3.3:-87807296 MS.gene014834:CDS
GGGCTTGAAACTGTAGGAAA+GGG 0.497092 3.3:-87806605 MS.gene014834:CDS
CCCCAAATTGGGTAATCCTA+TGG 0.504344 3.3:+87806468 None:intergenic
TACCTTAACCCGAAGGAGGC+GGG 0.504347 3.3:-87807631 MS.gene014834:CDS
AAAGCCTTGTCAGAAATTGT+TGG 0.508372 3.3:+87807019 None:intergenic
ATCCGTAACTGCCCTGGAGT+TGG 0.514000 3.3:-87806317 MS.gene014834:CDS
AGAGTAAAATTACCAACTCC+AGG 0.518751 3.3:+87806305 None:intergenic
GGGATTTCTGCCCTTACTCG+TGG 0.522818 3.3:-87805972 MS.gene014834:CDS
TGGGCTTGAAACTGTAGGAA+AGG 0.523098 3.3:-87806606 MS.gene014834:CDS
AGACTAGCTGCCATTGCTGT+TGG 0.523447 3.3:-87807253 MS.gene014834:CDS
TAGAAGCGTAAGCCAGCGCT+TGG 0.524179 3.3:+87807402 None:intergenic
TGAGAAAGGATTCTGGGTGA+TGG 0.528174 3.3:-87806696 MS.gene014834:CDS
GGTTTATTTCACTGCTTCAG+AGG 0.535734 3.3:-87806208 MS.gene014834:CDS
TCTTGAATTGATTGGACTTG+AGG 0.537468 3.3:-87806246 MS.gene014834:CDS
TGAAGCAGTGAAATAAACCC+TGG 0.539869 3.3:+87806212 None:intergenic
TGTCCTAGCATCGGTAATGA+AGG 0.540249 3.3:-87806944 MS.gene014834:CDS
GGATTCTGGGTGATGGGTAA+GGG 0.542572 3.3:-87806689 MS.gene014834:CDS
TATCTTTCTCGAAGCTTGGA+GGG 0.544169 3.3:-87807295 MS.gene014834:CDS
AAATTGTTGGCAACTTGCAT+AGG 0.545096 3.3:+87807032 None:intergenic
GAGAAAGGATTCTGGGTGAT+GGG 0.547572 3.3:-87806695 MS.gene014834:CDS
GTCTGACATGGAGATACTGC+TGG 0.549571 3.3:+87806356 None:intergenic
TTACTCTGGTAAGCTGCTAC+GGG 0.552800 3.3:-87806403 MS.gene014834:CDS
AATTCAAGACATTGAAGCAT+AGG 0.554251 3.3:+87806260 None:intergenic
TGTCCTGGAGTTCGTGATCA+GGG 0.555690 3.3:-87806866 MS.gene014834:CDS
ATCTTTCTCGAAGCTTGGAG+GGG 0.555765 3.3:-87807294 MS.gene014834:CDS
GTACCTTAACCCGAAGGAGG+CGG 0.556569 3.3:-87807632 MS.gene014834:CDS
GTGCATTTCTGTCAGACAAT+GGG 0.557102 3.3:-87806547 MS.gene014834:CDS
TAATGGTTGTCATCAGATAG+AGG 0.558248 3.3:-87807062 MS.gene014834:CDS
GAGTGAAAGACTTCAGAGAA+GGG 0.568710 3.3:+87807131 None:intergenic
GATATTGGGCTTGAAACTGT+AGG 0.573009 3.3:-87806611 MS.gene014834:CDS
TGCATCAATCTGACAGATGT+AGG 0.573775 3.3:-87806149 MS.gene014834:CDS
ATTCCCTGATCACGAACTCC+AGG 0.574036 3.3:+87806863 None:intergenic
CAAAGCTACCTGCTCAGAAG+AGG 0.575228 3.3:+87805772 None:intergenic
AGAGTGAAAGACTTCAGAGA+AGG 0.580309 3.3:+87807130 None:intergenic
CTTTCTCAGTGACATTTGGG+AGG 0.580956 3.3:+87806711 None:intergenic
TGTGCATTTCTGTCAGACAA+TGG 0.584416 3.3:-87806548 MS.gene014834:CDS
AAATTGGGTGATTCCCTCGA+GGG 0.585090 3.3:-87805873 MS.gene014834:CDS
ATTGTCTGCAATTGCTGTCA+AGG 0.587916 3.3:+87806046 None:intergenic
CTTGACTGATGTAGGCCTCA+AGG 0.588870 3.3:-87807170 MS.gene014834:CDS
AGATTGTGTGCCAACAGCAA+TGG 0.591886 3.3:+87807243 None:intergenic
AGCCATGAGCAACTGCCTTG+AGG 0.592490 3.3:+87807155 None:intergenic
CAACGCAAGTTCTGGAGACA+AGG 0.592934 3.3:-87807350 MS.gene014834:CDS
GAACAGGACTCCACGAGTAA+GGG 0.593363 3.3:+87805962 None:intergenic
GATCGTGCCTTGACTGATGT+AGG 0.600537 3.3:-87807178 MS.gene014834:CDS
CCGCACAGTTAACAAGCTTG+TGG 0.604170 3.3:-87805817 MS.gene014834:CDS
CCATAGGATTACCCAATTTG+GGG 0.605745 3.3:-87806468 MS.gene014834:CDS
GTTGCCAACAATTTCTGACA+AGG 0.608947 3.3:-87807023 MS.gene014834:CDS
AAGGGCAGAAATCCCTGCAT+CGG 0.611779 3.3:+87805980 None:intergenic
ATTTCTGTCAGACAATGGGC+TGG 0.612009 3.3:-87806543 MS.gene014834:CDS
TACAATTGGAAGAGTGCCAT+AGG 0.616497 3.3:-87806484 MS.gene014834:CDS
CTTGAGGGAATAACAGACCC+AGG 0.616547 3.3:-87806230 MS.gene014834:CDS
ATCCTTAGAAGGTTGCCTGA+AGG 0.616856 3.3:-87807454 MS.gene014834:CDS
ATAGAGTCATGTCCTAGCAT+CGG 0.621372 3.3:-87806953 MS.gene014834:CDS
CGAACAATGCAACTTGACCA+TGG 0.623330 3.3:+87806118 None:intergenic
GAAGCAGTGAAATAAACCCT+GGG 0.624828 3.3:+87806213 None:intergenic
GTTGCTACCATTAGTGACGA+AGG 0.630247 3.3:-87807100 MS.gene014834:CDS
ACCACGGTTTAAAATGACAC+CGG 0.630252 3.3:+87806442 None:intergenic
ACCTTCTAAGGATCTCAAAG+AGG 0.631936 3.3:+87807464 None:intergenic
AGTGTGCAATCACCGATGCA+GGG 0.633058 3.3:-87805992 MS.gene014834:CDS
GCATAGGACAGAGCTTTCCA+AGG 0.635442 3.3:+87806276 None:intergenic
CTTGAGGCCTACATCAGTCA+AGG 0.638943 3.3:+87807171 None:intergenic
GCCCAATATCTGTTACTCCA+GGG 0.638985 3.3:+87806624 None:intergenic
AATGACGAAATTGTCTGACA+TGG 0.645410 3.3:+87806344 None:intergenic
GTCGATGTACCTTAACCCGA+AGG 0.647280 3.3:-87807638 None:intergenic
AGACCTTCATTACCGATGCT+AGG 0.654284 3.3:+87806941 None:intergenic
GAGTAAAATTACCAACTCCA+GGG 0.662405 3.3:+87806306 None:intergenic
TTGAGGGAATAACAGACCCA+GGG 0.669478 3.3:-87806229 MS.gene014834:CDS
GATGTACCTTAACCCGAAGG+AGG 0.670839 3.3:-87807635 MS.gene014834:CDS
CCACAAGCTTGTTAACTGTG+CGG 0.680303 3.3:+87805817 None:intergenic
GCTGTTGGCACACAATCTCG+AGG 0.687326 3.3:-87807238 MS.gene014834:CDS
AAAATTGGGTGATTCCCTCG+AGG 0.689356 3.3:-87805874 MS.gene014834:CDS
CAGTGACAATCAAGAATTTG+GGG 0.690211 3.3:-87807326 MS.gene014834:CDS
GTTGGCACACAATCTCGAGG+AGG 0.726557 3.3:-87807235 MS.gene014834:CDS
TGGGCTGGTATCGTTCACCA+AGG 0.727978 3.3:-87806528 MS.gene014834:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAACCTTAATGGTTGTAAAA+AGG - chr3.3:87807338-87807357 MS.gene014834:CDS 25.0%
!! TTTTATATTTAATCCCTCGA+GGG + chr3.3:87807562-87807581 None:intergenic 25.0%
!! TTTTTATATTTAATCCCTCG+AGG + chr3.3:87807563-87807582 None:intergenic 25.0%
!!! AGGACAGTTTTTAATTGATA+CGG + chr3.3:87806539-87806558 None:intergenic 25.0%
!!! TGTCAGCTTTTTTAGAATAA+TGG + chr3.3:87806605-87806624 None:intergenic 25.0%
!!! TTGTCTGCTTTGAAAAAATT+GGG - chr3.3:87807531-87807550 MS.gene014834:CDS 25.0%
AATTCAAGACATTGAAGCAT+AGG + chr3.3:87807162-87807181 None:intergenic 30.0%
ACAGTGACAATCAAGAATTT+GGG - chr3.3:87806092-87806111 MS.gene014834:CDS 30.0%
CTTAATGGTTGTAAAAAGGT+CGG - chr3.3:87807342-87807361 MS.gene014834:CDS 30.0%
CTTCAATGTCTTGAATTGAT+TGG - chr3.3:87807165-87807184 MS.gene014834:CDS 30.0%
GTATCAATTAAAAACTGTCC+TGG - chr3.3:87806538-87806557 MS.gene014834:CDS 30.0%
TAGATTAACATTACCCAAAC+TGG + chr3.3:87807244-87807263 None:intergenic 30.0%
TTAATGGTTGTAAAAAGGTC+GGG - chr3.3:87807343-87807362 MS.gene014834:CDS 30.0%
TTGGGTAATGTTAATCTAAG+TGG - chr3.3:87807246-87807265 MS.gene014834:CDS 30.0%
! TAATGGATGCTGAACATAAA+AGG + chr3.3:87806588-87806607 None:intergenic 30.0%
!! CTTGTCTGCTTTGAAAAAAT+TGG - chr3.3:87807530-87807549 MS.gene014834:CDS 30.0%
AAAATTGAAGGCTCTTACTC+TGG - chr3.3:87807002-87807021 MS.gene014834:CDS 35.0%
AAAGTACATCCAGATTGAAC+AGG + chr3.3:87807476-87807495 None:intergenic 35.0%
AAATTGTTGGCAACTTGCAT+AGG + chr3.3:87806390-87806409 None:intergenic 35.0%
AATCAAGAATTTGGGGATGA+AGG - chr3.3:87806100-87806119 MS.gene014834:CDS 35.0%
AATCCTTTCTCAGTGACATT+TGG + chr3.3:87806715-87806734 None:intergenic 35.0%
AATGAAGGTCTACATGCTAT+TGG - chr3.3:87806490-87806509 MS.gene014834:CDS 35.0%
AATGACGAAATTGTCTGACA+TGG + chr3.3:87807078-87807097 None:intergenic 35.0%
AATTGTAGGCTCACAATTGA+TGG + chr3.3:87806922-87806941 None:intergenic 35.0%
AGAGTAAAATTACCAACTCC+AGG + chr3.3:87807117-87807136 None:intergenic 35.0%
ATCAATTGTGAGCCTACAAT+TGG - chr3.3:87806921-87806940 MS.gene014834:CDS 35.0%
ATCCTTTCTCAGTGACATTT+GGG + chr3.3:87806714-87806733 None:intergenic 35.0%
ATCGATAACTCAGTCAGATT+CGG + chr3.3:87806448-87806467 None:intergenic 35.0%
ATGAAGGTCTACATGCTATT+GGG - chr3.3:87806491-87806510 MS.gene014834:CDS 35.0%
ATTGATACGGACCTTAGATT+TGG + chr3.3:87806526-87806545 None:intergenic 35.0%
CAATCTGGATGTACTTTCTT+TGG - chr3.3:87807479-87807498 MS.gene014834:CDS 35.0%
CAGTGACAATCAAGAATTTG+GGG - chr3.3:87806093-87806112 MS.gene014834:CDS 35.0%
CTAGCAGTTATTGGACAATA+TGG - chr3.3:87806655-87806674 MS.gene014834:CDS 35.0%
CTTGAATTGATTGGACTTGA+GGG - chr3.3:87807174-87807193 MS.gene014834:CDS 35.0%
GACAGTGACAATCAAGAATT+TGG - chr3.3:87806091-87806110 MS.gene014834:CDS 35.0%
GAGTAAAATTACCAACTCCA+GGG + chr3.3:87807116-87807135 None:intergenic 35.0%
GATTACTCACTAGCAGTTAT+TGG - chr3.3:87806646-87806665 MS.gene014834:CDS 35.0%
GTCTGTATGCATATTCTTGA+CGG + chr3.3:87805832-87805851 None:intergenic 35.0%
TAATGGTTGTAAAAAGGTCG+GGG - chr3.3:87807344-87807363 MS.gene014834:CDS 35.0%
TAATGGTTGTCATCAGATAG+AGG - chr3.3:87806357-87806376 MS.gene014834:CDS 35.0%
TCTTGAATTGATTGGACTTG+AGG - chr3.3:87807173-87807192 MS.gene014834:CDS 35.0%
TGACATTTGGGAGGAAATTT+AGG + chr3.3:87806702-87806721 None:intergenic 35.0%
TTAGGGAAGCTTTCAATTCA+TGG - chr3.3:87806208-87806227 MS.gene014834:CDS 35.0%
TTGACTTCAGTGGAGAAAAA+TGG - chr3.3:87805885-87805904 MS.gene014834:CDS 35.0%
TTTCTCCACTGAAGTCAAAT+GGG + chr3.3:87805883-87805902 None:intergenic 35.0%
! AAAGCCTTGTCAGAAATTGT+TGG + chr3.3:87806403-87806422 None:intergenic 35.0%
! AATTTTACTCTCAACGTCCT+TGG - chr3.3:87807126-87807145 MS.gene014834:CDS 35.0%
! AGCTGACAGTTTTTCACATT+TGG + chr3.3:87806844-87806863 None:intergenic 35.0%
! CGACCTTTTTACAACCATTA+AGG + chr3.3:87807344-87807363 None:intergenic 35.0%
! TATTGGACAATATGGCTTTG+TGG - chr3.3:87806663-87806682 MS.gene014834:CDS 35.0%
! TCTGAAGTCTTTCACTCTTT+GGG - chr3.3:87806294-87806313 MS.gene014834:CDS 35.0%
! TTTTCTCCACTGAAGTCAAA+TGG + chr3.3:87805884-87805903 None:intergenic 35.0%
AAACCGTGGTGCAAAATTGA+AGG - chr3.3:87806990-87807009 MS.gene014834:CDS 40.0%
AAACTCCTATCTTGTCCTTC+AGG + chr3.3:87805983-87806002 None:intergenic 40.0%
AACTAACGTCGCTCACAATT+GGG - chr3.3:87806767-87806786 MS.gene014834:CDS 40.0%
AAGTTGCATTGTTCGACTCT+TGG - chr3.3:87807309-87807328 MS.gene014834:CDS 40.0%
AGAGTGAAAGACTTCAGAGA+AGG + chr3.3:87806292-87806311 None:intergenic 40.0%
ATAGAGTCATGTCCTAGCAT+CGG - chr3.3:87806466-87806485 MS.gene014834:CDS 40.0%
ATGTCACTGAGAAAGGATTC+TGG - chr3.3:87806716-87806735 MS.gene014834:CDS 40.0%
ATTGTCTGCAATTGCTGTCA+AGG + chr3.3:87807376-87807395 None:intergenic 40.0%
CCATAGGATTACCCAATTTG+GGG - chr3.3:87806951-87806970 MS.gene014834:CDS 40.0%
GAAGCAGTGAAATAAACCCT+GGG + chr3.3:87807209-87807228 None:intergenic 40.0%
GAGTGAAAGACTTCAGAGAA+GGG + chr3.3:87806291-87806310 None:intergenic 40.0%
GATATTGGGCTTGAAACTGT+AGG - chr3.3:87806808-87806827 MS.gene014834:CDS 40.0%
GCCATAGGATTACCCAATTT+GGG - chr3.3:87806950-87806969 MS.gene014834:CDS 40.0%
GGAAGTTGTGTCCAAATCTA+AGG - chr3.3:87806512-87806531 MS.gene014834:CDS 40.0%
GGTTTATTTCACTGCTTCAG+AGG - chr3.3:87807211-87807230 MS.gene014834:CDS 40.0%
GTGCATTTCTGTCAGACAAT+GGG - chr3.3:87806872-87806891 MS.gene014834:CDS 40.0%
GTTGCCAACAATTTCTGACA+AGG - chr3.3:87806396-87806415 MS.gene014834:CDS 40.0%
GTTGCTGCAGATTTCATTCT+TGG + chr3.3:87806053-87806072 None:intergenic 40.0%
TATCTTTCTCGAAGCTTGGA+GGG - chr3.3:87806124-87806143 MS.gene014834:CDS 40.0%
TATGGCACTCTTCCAATTGT+AGG + chr3.3:87806936-87806955 None:intergenic 40.0%
TGAAAAACTGTCAGCTTCGT+AGG - chr3.3:87806848-87806867 MS.gene014834:CDS 40.0%
TGAAGCAGTGAAATAAACCC+TGG + chr3.3:87807210-87807229 None:intergenic 40.0%
TGCATCAATCTGACAGATGT+AGG - chr3.3:87807270-87807289 MS.gene014834:CDS 40.0%
TGCCATAGGATTACCCAATT+TGG - chr3.3:87806949-87806968 MS.gene014834:CDS 40.0%
TGTCACTGAGAAAGGATTCT+GGG - chr3.3:87806717-87806736 MS.gene014834:CDS 40.0%
TGTGCATTTCTGTCAGACAA+TGG - chr3.3:87806871-87806890 MS.gene014834:CDS 40.0%
! AATGTCCCATTTGACTTCAG+TGG - chr3.3:87805875-87805894 MS.gene014834:CDS 40.0%
! ACCACGGTTTAAAATGACAC+CGG + chr3.3:87806980-87806999 None:intergenic 40.0%
! ACCTTCTAAGGATCTCAAAG+AGG + chr3.3:87805958-87805977 None:intergenic 40.0%
! CTTGGAGTGCTAAACCTTAA+TGG - chr3.3:87807327-87807346 MS.gene014834:CDS 40.0%
!! AAGCGAGATCTCTTTTGAAG+AGG + chr3.3:87805854-87805873 None:intergenic 40.0%
!! AGATGTAGGAGTTTTGTCCA+TGG - chr3.3:87807284-87807303 MS.gene014834:CDS 40.0%
!! ATCTCAAAGAGGCATTCATC+AGG + chr3.3:87805947-87805966 None:intergenic 40.0%
!! CTCTGAAGTCTTTCACTCTT+TGG - chr3.3:87806293-87806312 MS.gene014834:CDS 40.0%
!! TACAATTGGAAGAGTGCCAT+AGG - chr3.3:87806935-87806954 MS.gene014834:CDS 40.0%
AAAATTGGGTGATTCCCTCG+AGG - chr3.3:87807545-87807564 MS.gene014834:CDS 45.0%
AAATTGGGTGATTCCCTCGA+GGG - chr3.3:87807546-87807565 MS.gene014834:CDS 45.0%
ACAAGCTTGTGGAACATCTC+TGG - chr3.3:87807613-87807632 MS.gene014834:CDS 45.0%
ACACAATCTCGAGGAGGATT+AGG - chr3.3:87806190-87806209 MS.gene014834:CDS 45.0%
AGACCTTCATTACCGATGCT+AGG + chr3.3:87806481-87806500 None:intergenic 45.0%
AGATTGTGTGCCAACAGCAA+TGG + chr3.3:87806179-87806198 None:intergenic 45.0%
AGCCCAATATCTGTTACTCC+AGG + chr3.3:87806799-87806818 None:intergenic 45.0%
AGGCTATCTTTCTCGAAGCT+TGG - chr3.3:87806120-87806139 MS.gene014834:CDS 45.0%
ATCCTTAGAAGGTTGCCTGA+AGG - chr3.3:87805965-87805984 MS.gene014834:CDS 45.0%
ATCTTTCTCGAAGCTTGGAG+GGG - chr3.3:87806125-87806144 MS.gene014834:CDS 45.0%
ATTTCTGTCAGACAATGGGC+TGG - chr3.3:87806876-87806895 MS.gene014834:CDS 45.0%
CAACTAACGTCGCTCACAAT+TGG - chr3.3:87806766-87806785 MS.gene014834:CDS 45.0%
CACAATCTCGAGGAGGATTA+GGG - chr3.3:87806191-87806210 MS.gene014834:CDS 45.0%
CCCCAAATTGGGTAATCCTA+TGG + chr3.3:87806954-87806973 None:intergenic 45.0%
CGAACAATGCAACTTGACCA+TGG + chr3.3:87807304-87807323 None:intergenic 45.0%
CTATCTTTCTCGAAGCTTGG+AGG - chr3.3:87806123-87806142 MS.gene014834:CDS 45.0%
CTCCCAAATGTCACTGAGAA+AGG - chr3.3:87806709-87806728 MS.gene014834:CDS 45.0%
CTGGATGTACTTTCTTTGGC+AGG - chr3.3:87807483-87807502 MS.gene014834:CDS 45.0%
CTTACTCTGGTAAGCTGCTA+CGG - chr3.3:87807015-87807034 MS.gene014834:CDS 45.0%
CTTTCTCAGTGACATTTGGG+AGG + chr3.3:87806711-87806730 None:intergenic 45.0%
GAGAAAGGATTCTGGGTGAT+GGG - chr3.3:87806724-87806743 MS.gene014834:CDS 45.0%
GATCAAGCCTTCGTCACTAA+TGG + chr3.3:87806329-87806348 None:intergenic 45.0%
GCCCAATATCTGTTACTCCA+GGG + chr3.3:87806798-87806817 None:intergenic 45.0%
GCCCTGGAGTAACAGATATT+GGG - chr3.3:87806794-87806813 MS.gene014834:CDS 45.0%
GGCTTGATCGAGATTGCTAA+TGG - chr3.3:87806340-87806359 MS.gene014834:CDS 45.0%
GGGCTTGAAACTGTAGGAAA+GGG - chr3.3:87806814-87806833 MS.gene014834:CDS 45.0%
GTTGCTACCATTAGTGACGA+AGG - chr3.3:87806319-87806338 MS.gene014834:CDS 45.0%
TGAGAAAGGATTCTGGGTGA+TGG - chr3.3:87806723-87806742 MS.gene014834:CDS 45.0%
TGCCCTGGAGTAACAGATAT+TGG - chr3.3:87806793-87806812 MS.gene014834:CDS 45.0%
TGGGCTTGAAACTGTAGGAA+AGG - chr3.3:87806813-87806832 MS.gene014834:CDS 45.0%
TTACTCTGGTAAGCTGCTAC+GGG - chr3.3:87807016-87807035 MS.gene014834:CDS 45.0%
TTATCAATCCGTAACTGCCC+TGG - chr3.3:87807096-87807115 MS.gene014834:CDS 45.0%
TTCACTGCTTCAGAGGTCTA+AGG - chr3.3:87807218-87807237 MS.gene014834:CDS 45.0%
TTCTTTGGCAGGTTGCTCAT+TGG - chr3.3:87807494-87807513 MS.gene014834:CDS 45.0%
TTGAGGGAATAACAGACCCA+GGG - chr3.3:87807190-87807209 MS.gene014834:CDS 45.0%
! ATTACCCAATTTGGGGTTGC+CGG - chr3.3:87806958-87806977 MS.gene014834:CDS 45.0%
! GAGCCTTCAATTTTGCACCA+CGG + chr3.3:87806996-87807015 None:intergenic 45.0%
!! CCACAAGCTTGTTAACTGTG+CGG + chr3.3:87807605-87807624 None:intergenic 45.0%
!! GCCTCTTTGAGATCCTTAGA+AGG - chr3.3:87805954-87805973 MS.gene014834:CDS 45.0%
!! TGTCCTAGCATCGGTAATGA+AGG - chr3.3:87806475-87806494 MS.gene014834:CDS 45.0%
AAGGGCAGAAATCCCTGCAT+CGG + chr3.3:87807442-87807461 None:intergenic 50.0%
ACATCAGTCAAGGCACGATC+TGG + chr3.3:87806241-87806260 None:intergenic 50.0%
ACGTTAGTTGCTGCAGTGCA+TGG + chr3.3:87806756-87806775 None:intergenic 50.0%
AGTGTGCAATCACCGATGCA+GGG - chr3.3:87807427-87807446 MS.gene014834:CDS 50.0%
ATCTGCAGCAACGCAAGTTC+TGG - chr3.3:87806061-87806080 MS.gene014834:CDS 50.0%
ATTCCCTGATCACGAACTCC+AGG + chr3.3:87806559-87806578 None:intergenic 50.0%
CACAATTGATGGAGCAGCCT+TGG + chr3.3:87806911-87806930 None:intergenic 50.0%
CCGCACAGTTAACAAGCTTG+TGG - chr3.3:87807602-87807621 MS.gene014834:CDS 50.0%
CTTGACTGATGTAGGCCTCA+AGG - chr3.3:87806249-87806268 MS.gene014834:CDS 50.0%
CTTGAGGCCTACATCAGTCA+AGG + chr3.3:87806251-87806270 None:intergenic 50.0%
CTTGAGGGAATAACAGACCC+AGG - chr3.3:87807189-87807208 MS.gene014834:CDS 50.0%
GAACAGGACTCCACGAGTAA+GGG + chr3.3:87807460-87807479 None:intergenic 50.0%
GATCGTGCCTTGACTGATGT+AGG - chr3.3:87806241-87806260 MS.gene014834:CDS 50.0%
GCATAGGACAGAGCTTTCCA+AGG + chr3.3:87807146-87807165 None:intergenic 50.0%
GGTTGCCTGAAGGACAAGAT+AGG - chr3.3:87805975-87805994 MS.gene014834:CDS 50.0%
GTCCTTCAGGCAACCTTCTA+AGG + chr3.3:87805970-87805989 None:intergenic 50.0%
GTCTGACATGGAGATACTGC+TGG + chr3.3:87807066-87807085 None:intergenic 50.0%
GTTCGTGATCAGGGAATTGC+TGG - chr3.3:87806562-87806581 MS.gene014834:CDS 50.0%
TACCAACTCCAGGGCAGTTA+CGG + chr3.3:87807107-87807126 None:intergenic 50.0%
TCGAAGCTTGGAGGGGAAAA+AGG - chr3.3:87806132-87806151 MS.gene014834:CDS 50.0%
TCGTGGAGTCCTGTTCAATC+TGG - chr3.3:87807464-87807483 MS.gene014834:CDS 50.0%
TGAACAGGACTCCACGAGTA+AGG + chr3.3:87807461-87807480 None:intergenic 50.0%
TGTCCTGGAGTTCGTGATCA+GGG - chr3.3:87806553-87806572 MS.gene014834:CDS 50.0%
! AGACTAGCTGCCATTGCTGT+TGG - chr3.3:87806166-87806185 MS.gene014834:CDS 50.0%
! CAGAGGTCTAAGGCCAGTTT+GGG - chr3.3:87807228-87807247 MS.gene014834:CDS 50.0%
! TCAGAGGTCTAAGGCCAGTT+TGG - chr3.3:87807227-87807246 MS.gene014834:CDS 50.0%
! TGCATCGGTGATTGCACACT+CGG + chr3.3:87807427-87807446 None:intergenic 50.0%
!! AGGATTCTGGGTGATGGGTA+AGG - chr3.3:87806729-87806748 MS.gene014834:CDS 50.0%
!! CAACGCAAGTTCTGGAGACA+AGG - chr3.3:87806069-87806088 MS.gene014834:CDS 50.0%
!! GGATTCTGGGTGATGGGTAA+GGG - chr3.3:87806730-87806749 MS.gene014834:CDS 50.0%
!!! GCCGGTGTCATTTTAAACCG+TGG - chr3.3:87806976-87806995 MS.gene014834:CDS 50.0%
AAGAAGAGACCCGCCTCCTT+CGG + chr3.3:87805800-87805819 None:intergenic 55.0%
AGCCATGAGCAACTGCCTTG+AGG + chr3.3:87806267-87806286 None:intergenic 55.0%
ATCCGTAACTGCCCTGGAGT+TGG - chr3.3:87807102-87807121 MS.gene014834:CDS 55.0%
CTGTCCTGGAGTTCGTGATC+AGG - chr3.3:87806552-87806571 MS.gene014834:CDS 55.0%
GACACCGGCAACCCCAAATT+GGG + chr3.3:87806965-87806984 None:intergenic 55.0%
GAGTGTGCAATCACCGATGC+AGG - chr3.3:87807426-87807445 MS.gene014834:CDS 55.0%
GCGGGTCTCTTCTTGTCTCT+TGG - chr3.3:87805806-87805825 MS.gene014834:CDS 55.0%
GCTGTTGGCACACAATCTCG+AGG - chr3.3:87806181-87806200 MS.gene014834:CDS 55.0%
GGGATTTCTGCCCTTACTCG+TGG - chr3.3:87807447-87807466 MS.gene014834:CDS 55.0%
GTACCTTAACCCGAAGGAGG+CGG - chr3.3:87805787-87805806 MS.gene014834:CDS 55.0%
GTGCTTCTGTATCCAAGCGC+TGG - chr3.3:87806005-87806024 MS.gene014834:CDS 55.0%
GTTGGCACACAATCTCGAGG+AGG - chr3.3:87806184-87806203 MS.gene014834:CDS 55.0%
TACCTTAACCCGAAGGAGGC+GGG - chr3.3:87805788-87805807 MS.gene014834:CDS 55.0%
TGACACCGGCAACCCCAAAT+TGG + chr3.3:87806966-87806985 None:intergenic 55.0%
! TAGAAGCGTAAGCCAGCGCT+TGG + chr3.3:87806020-87806039 None:intergenic 55.0%
!! TGGGCTGGTATCGTTCACCA+AGG - chr3.3:87806891-87806910 MS.gene014834:CDS 55.0%
AGAAGAGACCCGCCTCCTTC+GGG + chr3.3:87805799-87805818 None:intergenic 60.0%
CTCACAATTGGGCTGTGCCC+TGG - chr3.3:87806778-87806797 MS.gene014834:CDS 60.0%
GGCCTCAAGGCAGTTGCTCA+TGG - chr3.3:87806262-87806281 MS.gene014834:CDS 60.0%
! GACCCGCCTCCTTCGGGTTA+AGG + chr3.3:87805793-87805812 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 87805785 87807656 87805785 ID=MS.gene014834
chr3.3 mRNA 87805785 87807656 87805785 ID=MS.gene014834.t1;Parent=MS.gene014834
chr3.3 exon 87805785 87807656 87805785 ID=MS.gene014834.t1.exon1;Parent=MS.gene014834.t1
chr3.3 CDS 87805785 87807656 87805785 ID=cds.MS.gene014834.t1;Parent=MS.gene014834.t1
Gene Sequence

>MS.gene014834

ATGTACCTTAACCCGAAGGAGGCGGGTCTCTTCTTGTCTCTTGGCCGTCAAGAATATGCATACAGACCTCTTCAAAAGAGATCTCGCTTCAATGTCCCATTTGACTTCAGTGGAGAAAAATGGTTTGAGCAGAAGCTAGAGACATCTATTGAAACATTGCCTGATGAATGCCTCTTTGAGATCCTTAGAAGGTTGCCTGAAGGACAAGATAGGAGTTTATGTGCTTCTGTATCCAAGCGCTGGCTTACGCTTCTAAGCAGTATTTCCAAGAATGAAATCTGCAGCAACGCAAGTTCTGGAGACAAGGACAGTGACAATCAAGAATTTGGGGATGAAGGCTATCTTTCTCGAAGCTTGGAGGGGAAAAAGGCAACAGATGTTAGACTAGCTGCCATTGCTGTTGGCACACAATCTCGAGGAGGATTAGGGAAGCTTTCAATTCATGGAAGCAATCCAGATCGTGCCTTGACTGATGTAGGCCTCAAGGCAGTTGCTCATGGCTGCCCTTCTCTGAAGTCTTTCACTCTTTGGGATGTTGCTACCATTAGTGACGAAGGCTTGATCGAGATTGCTAATGGTTGTCATCAGATAGAGGAGCTTGACCTATGCAAGTTGCCAACAATTTCTGACAAGGCTTTGATTGCAGTTGCAAAGCACTGTCCGAATCTGACTGAGTTATCGATAGAGTCATGTCCTAGCATCGGTAATGAAGGTCTACATGCTATTGGGAAGTTGTGTCCAAATCTAAGGTCCGTATCAATTAAAAACTGTCCTGGAGTTCGTGATCAGGGAATTGCTGGCCTTTTATGTTCAGCATCCATTATTCTAAAAAAGCTGACACTTGAATCGCTAGCTGTTTCTGATTACTCACTAGCAGTTATTGGACAATATGGCTTTGTGGTTACTGATCTTGTCCTAAATTTCCTCCCAAATGTCACTGAGAAAGGATTCTGGGTGATGGGTAAGGGCCATGCACTGCAGCAACTAACGTCGCTCACAATTGGGCTGTGCCCTGGAGTAACAGATATTGGGCTTGAAACTGTAGGAAAGGGTTGTCCAAATGTGAAAAACTGTCAGCTTCGTAGGTGTGCATTTCTGTCAGACAATGGGCTGGTATCGTTCACCAAGGCTGCTCCATCAATTGTGAGCCTACAATTGGAAGAGTGCCATAGGATTACCCAATTTGGGGTTGCCGGTGTCATTTTAAACCGTGGTGCAAAATTGAAGGCTCTTACTCTGGTAAGCTGCTACGGGATCAAAGATCTGAATCTCAATTTGCCAGCAGTATCTCCATGTCAGACAATTTCGTCATTATCAATCCGTAACTGCCCTGGAGTTGGTAATTTTACTCTCAACGTCCTTGGAAAGCTCTGTCCTATGCTTCAATGTCTTGAATTGATTGGACTTGAGGGAATAACAGACCCAGGGTTTATTTCACTGCTTCAGAGGTCTAAGGCCAGTTTGGGTAATGTTAATCTAAGTGGTTGCATCAATCTGACAGATGTAGGAGTTTTGTCCATGGTCAAGTTGCATTGTTCGACTCTTGGAGTGCTAAACCTTAATGGTTGTAAAAAGGTCGGGGATGCTTCCTTGACAGCAATTGCAGACAATTGCATTGTCTTGAGTGATCTTGATGTTTCCGAGTGTGCAATCACCGATGCAGGGATTTCTGCCCTTACTCGTGGAGTCCTGTTCAATCTGGATGTACTTTCTTTGGCAGGTTGCTCATTGGTTTCAAACAAGAGCTTGTCTGCTTTGAAAAAATTGGGTGATTCCCTCGAGGGATTAAATATAAAAAATTGCAATTCGATCAGCAGCCGCACAGTTAACAAGCTTGTGGAACATCTCTGGATGTGTGACATCCTCTTCTGA
Protein sequence

>MS.gene014834.t1

MYLNPKEAGLFLSLGRQEYAYRPLQKRSRFNVPFDFSGEKWFEQKLETSIETLPDECLFEILRRLPEGQDRSLCASVSKRWLTLLSSISKNEICSNASSGDKDSDNQEFGDEGYLSRSLEGKKATDVRLAAIAVGTQSRGGLGKLSIHGSNPDRALTDVGLKAVAHGCPSLKSFTLWDVATISDEGLIEIANGCHQIEELDLCKLPTISDKALIAVAKHCPNLTELSIESCPSIGNEGLHAIGKLCPNLRSVSIKNCPGVRDQGIAGLLCSASIILKKLTLESLAVSDYSLAVIGQYGFVVTDLVLNFLPNVTEKGFWVMGKGHALQQLTSLTIGLCPGVTDIGLETVGKGCPNVKNCQLRRCAFLSDNGLVSFTKAAPSIVSLQLEECHRITQFGVAGVILNRGAKLKALTLVSCYGIKDLNLNLPAVSPCQTISSLSIRNCPGVGNFTLNVLGKLCPMLQCLELIGLEGITDPGFISLLQRSKASLGNVNLSGCINLTDVGVLSMVKLHCSTLGVLNLNGCKKVGDASLTAIADNCIVLSDLDVSECAITDAGISALTRGVLFNLDVLSLAGCSLVSNKSLSALKKLGDSLEGLNIKNCNSISSRTVNKLVEHLWMCDILF