AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene014935

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014935.t1 MTR_3g105610 93.194 764 48 1 1 760 227 990 0.0 1452
MS.gene014935.t1 MTR_3g105595 83.553 760 118 3 1 756 112 868 0.0 1277
MS.gene014935.t1 MTR_8g073210 39.634 656 368 12 6 650 224 862 1.06e-149 461
MS.gene014935.t1 MTR_3g115910 37.058 707 409 15 6 703 223 902 1.78e-146 452
MS.gene014935.t1 MTR_3g115910 37.058 707 409 15 6 703 268 947 4.50e-146 452
MS.gene014935.t1 MTR_2g088450 38.402 651 378 12 6 649 130 764 3.60e-144 444
MS.gene014935.t1 MTR_2g088450 38.402 651 378 12 6 649 163 797 2.98e-143 442
MS.gene014935.t1 MTR_2g088450 38.402 651 378 12 6 649 228 862 6.48e-143 443
MS.gene014935.t1 MTR_8g073490 36.996 719 410 17 4 700 221 918 2.85e-141 439
MS.gene014935.t1 MTR_5g024350 36.433 656 392 14 6 651 223 863 1.04e-136 427
MS.gene014935.t1 MTR_5g024350 36.433 656 392 14 6 651 255 895 1.63e-136 428
MS.gene014935.t1 MTR_2g088430 34.663 652 401 13 7 649 222 857 4.16e-128 404
MS.gene014935.t1 MTR_4g087925 35.251 678 384 13 6 676 241 870 2.91e-127 402
MS.gene014935.t1 MTR_3g115910 37.478 571 328 11 6 567 223 773 5.92e-118 374
MS.gene014935.t1 MTR_2g015270 33.379 725 405 22 6 705 238 909 6.53e-117 378
MS.gene014935.t1 MTR_5g059920 35.115 655 362 17 7 646 240 846 4.24e-111 359
MS.gene014935.t1 MTR_5g059900 34.568 648 360 16 7 646 146 737 7.16e-105 338
MS.gene014935.t1 MTR_2g088450 40.208 480 269 9 6 479 228 695 8.70e-104 334
MS.gene014935.t1 MTR_2g015260 30.790 747 408 22 1 725 42 701 3.62e-103 333
MS.gene014935.t1 MTR_0018s0240 32.672 655 359 17 7 646 167 754 6.44e-101 330
MS.gene014935.t1 MTR_0018s0230 31.394 653 368 15 7 646 145 730 1.59e-95 315
MS.gene014935.t1 MTR_2g015290 31.811 657 372 21 6 651 234 825 1.68e-95 318
MS.gene014935.t1 MTR_2g015310 31.402 656 371 21 6 651 236 822 3.17e-94 314
MS.gene014935.t1 MTR_5g059920 34.489 577 322 15 7 576 240 767 3.56e-93 308
MS.gene014935.t1 MTR_2g015280 31.014 661 371 19 6 657 233 817 1.12e-92 310
MS.gene014935.t1 MTR_8g073210 37.471 435 250 9 6 430 224 646 1.45e-84 282
MS.gene014935.t1 MTR_2g088450 37.995 429 248 9 6 428 130 546 6.46e-84 278
MS.gene014935.t1 MTR_2g088450 37.995 429 248 9 6 428 228 644 1.18e-82 277
MS.gene014935.t1 MTR_6g045087 39.356 404 226 9 251 640 39 437 1.67e-82 271
MS.gene014935.t1 MTR_3g115910 36.342 421 244 9 6 418 223 627 7.06e-82 275
MS.gene014935.t1 MTR_3g115910 36.342 421 244 9 6 418 268 672 1.37e-81 275
MS.gene014935.t1 MTR_2g088450 37.412 425 248 9 6 424 130 542 2.54e-80 267
MS.gene014935.t1 MTR_8g073210 36.643 423 246 9 6 418 224 634 3.65e-79 267
MS.gene014935.t1 MTR_0018s0230 30.849 577 323 15 7 576 145 652 3.06e-78 265
MS.gene014935.t1 MTR_5g060330 34.870 347 180 11 7 342 146 457 1.92e-47 179
MS.gene014935.t1 MTR_5g060330 35.333 150 82 6 529 666 466 612 4.02e-15 79.7
MS.gene014935.t1 MTR_8g073210 32.219 329 202 8 6 324 224 541 1.13e-42 163
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene014935.t1 AT2G29120 49.863 732 309 17 1 717 224 912 0.0 689
MS.gene014935.t1 AT2G29110 50.902 721 310 17 1 717 216 896 0.0 667
MS.gene014935.t1 AT2G29110 50.902 721 310 17 1 717 215 895 0.0 667
MS.gene014935.t1 AT2G29100 48.548 723 329 15 7 722 220 906 0.0 649
MS.gene014935.t1 AT2G29100 48.548 723 329 15 7 722 218 904 0.0 649
MS.gene014935.t1 AT2G24720 50.962 624 281 10 1 618 217 821 0.0 623
MS.gene014935.t1 AT5G27100 47.042 693 317 14 1 681 217 871 0.0 618
MS.gene014935.t1 AT2G24710 47.526 667 321 10 1 656 240 888 0.0 607
MS.gene014935.t1 AT2G24710 47.526 667 321 10 1 656 216 864 0.0 607
MS.gene014935.t1 AT5G11210 45.954 655 331 9 1 651 222 857 0.0 596
MS.gene014935.t1 AT5G11210 45.954 655 331 9 1 651 164 799 0.0 596
MS.gene014935.t1 AT5G11210 45.954 655 331 9 1 651 140 775 0.0 596
MS.gene014935.t1 AT5G11180 45.468 673 343 11 1 664 221 878 0.0 594
MS.gene014935.t1 AT4G31710 46.039 669 313 13 1 657 217 849 0.0 555
MS.gene014935.t1 AT2G24710 48.862 571 270 8 1 567 240 792 0.0 550
MS.gene014935.t1 AT4G31710 45.210 668 311 13 1 656 240 864 0.0 542
MS.gene014935.t1 AT5G11210 45.614 570 289 7 1 567 140 691 1.64e-176 523
MS.gene014935.t1 AT5G11210 45.614 570 289 7 1 567 140 691 1.86e-176 523
MS.gene014935.t1 AT5G11210 45.614 570 289 7 1 567 140 691 1.86e-176 523
MS.gene014935.t1 AT5G11210 45.614 570 289 7 1 567 148 699 2.17e-176 523
MS.gene014935.t1 AT5G11210 45.614 570 289 7 1 567 222 773 1.58e-175 524
MS.gene014935.t1 AT5G11210 45.614 570 289 7 1 567 222 773 1.61e-175 524
MS.gene014935.t1 AT5G11210 45.614 570 289 7 1 567 222 773 1.61e-175 524
MS.gene014935.t1 AT5G11180 41.071 672 313 15 1 664 221 817 7.34e-162 492
MS.gene014935.t1 AT1G42540 37.675 714 393 16 7 694 222 909 7.91e-151 464
MS.gene014935.t1 AT1G42540 37.675 714 393 16 7 694 222 909 7.91e-151 464
MS.gene014935.t1 AT1G42540 37.675 714 393 16 7 694 222 909 7.91e-151 464
MS.gene014935.t1 AT4G35290 36.895 702 401 19 6 688 223 901 5.27e-140 435
MS.gene014935.t1 AT4G35290 36.895 702 401 19 6 688 223 901 5.27e-140 435
MS.gene014935.t1 AT4G35290 36.895 702 401 19 6 688 223 901 5.27e-140 435
MS.gene014935.t1 AT4G35290 36.895 702 401 19 6 688 223 901 5.27e-140 435
MS.gene014935.t1 AT4G35290 36.895 702 401 19 6 688 223 901 5.27e-140 435
MS.gene014935.t1 AT2G17260 38.605 645 364 18 6 640 227 849 8.16e-136 425
MS.gene014935.t1 AT1G05200 35.474 654 398 11 6 652 251 887 1.21e-133 420
MS.gene014935.t1 AT1G05200 35.474 654 398 11 6 652 251 887 1.21e-133 420
MS.gene014935.t1 AT1G05200 35.474 654 398 11 6 652 251 887 1.21e-133 420
MS.gene014935.t1 AT3G51480 34.556 709 422 16 6 704 130 806 5.26e-132 411
MS.gene014935.t1 AT2G32390 36.641 655 395 12 6 652 136 778 9.34e-132 412
MS.gene014935.t1 AT2G32390 36.641 655 395 12 6 652 180 822 1.40e-131 413
MS.gene014935.t1 AT3G51480 34.556 709 422 16 6 704 220 896 5.63e-131 411
MS.gene014935.t1 AT3G51480 34.556 709 422 16 6 704 220 896 5.63e-131 411
MS.gene014935.t1 AT2G32390 36.794 655 394 12 6 652 238 880 3.26e-130 410
MS.gene014935.t1 AT3G07520 35.789 665 343 17 7 656 237 832 2.47e-120 382
MS.gene014935.t1 AT2G32400 33.242 731 438 18 3 712 218 919 4.51e-119 380
MS.gene014935.t1 AT5G48410 34.731 668 351 18 1 656 226 820 1.73e-115 369
MS.gene014935.t1 AT5G48400 34.132 668 360 20 1 656 224 823 4.50e-115 369
MS.gene014935.t1 AT4G35290 37.413 572 325 15 6 567 223 771 1.52e-113 362
MS.gene014935.t1 AT1G05200 35.366 574 347 11 6 572 251 807 1.15e-112 361
MS.gene014935.t1 AT1G05200 35.366 574 347 11 6 572 251 807 1.15e-112 361
MS.gene014935.t1 AT5G11210 49.853 341 165 5 313 651 13 349 7.69e-109 338
MS.gene014935.t1 AT3G51480 35.140 572 334 13 6 567 220 764 5.71e-106 342
MS.gene014935.t1 AT5G48410 35.579 579 291 17 1 567 226 734 3.02e-102 332
MS.gene014935.t1 AT5G48400 34.715 579 301 18 1 567 224 737 3.10e-101 329
MS.gene014935.t1 AT5G48410 33.084 668 335 19 1 656 226 793 1.13e-99 327
MS.gene014935.t1 AT5G48410 32.934 668 332 19 1 656 226 789 1.12e-97 321
MS.gene014935.t1 AT3G04110 30.757 647 353 19 8 640 222 787 2.25e-88 296
MS.gene014935.t1 AT2G32390 36.902 439 261 10 6 437 238 667 1.53e-87 290
MS.gene014935.t1 AT1G42540 37.071 437 240 11 7 428 222 638 1.93e-84 281
MS.gene014935.t1 AT2G32390 35.135 444 256 10 6 434 238 664 3.58e-84 282
MS.gene014935.t1 AT2G32390 35.135 444 256 10 6 434 238 664 3.58e-84 282
MS.gene014935.t1 AT1G05200 34.793 434 263 9 6 433 251 670 6.21e-81 273
MS.gene014935.t1 AT2G32390 35.629 421 255 10 6 419 238 649 2.33e-79 268
MS.gene014935.t1 AT1G05200 34.286 420 256 9 6 419 251 656 8.62e-76 258
MS.gene014935.t1 AT3G04110 30.142 564 309 16 8 567 222 704 3.04e-74 256
MS.gene014935.t1 AT3G04110 28.284 647 341 20 8 640 222 759 5.04e-71 248

Find 161 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGATCACTCAACTTTATTA+TGG 0.166418 3.3:-86912801 MS.gene014935:CDS
TTTACCTTAGCAAAACAAAT+TGG 0.173200 3.3:-86913686 MS.gene014935:CDS
TTTGATTCAGTTTGACTAAA+TGG 0.183703 3.3:+86910250 None:intergenic
TGAAGGGTTTGTTAGAAATT+TGG 0.183990 3.3:-86913150 MS.gene014935:CDS
TTGTTAAACACTAGATTTAA+TGG 0.210689 3.3:-86913281 MS.gene014935:CDS
GGAATTGGAGCCACTAAATT+TGG 0.217370 3.3:-86913395 MS.gene014935:CDS
GTCTTGGCCTTGAAAGCTTC+TGG 0.218697 3.3:-86910549 MS.gene014935:CDS
TGCACAAAATGGTGAGAAAT+TGG 0.227683 3.3:-86913312 MS.gene014935:CDS
CCTTATCATGATGATGATTT+AGG 0.232260 3.3:-86910313 MS.gene014935:CDS
CCCTATGTTAAGCAATTTCT+TGG 0.234449 3.3:-86911173 MS.gene014935:CDS
TATTCATTGGATTTGTTGTT+TGG 0.243141 3.3:-86912158 MS.gene014935:CDS
CAAGATTTGTGGTGGTTATA+TGG 0.248414 3.3:-86911472 MS.gene014935:CDS
AGCCACTCACATGGGATCTT+TGG 0.254131 3.3:-86912203 MS.gene014935:CDS
CAAAGATTAGGAGTGCTAAT+AGG 0.255670 3.3:+86910497 None:intergenic
TTGACTAAAATCTCCATAAA+AGG 0.279640 3.3:+86910222 None:intergenic
GCTTGTTCATTTGTATTCAT+TGG 0.284251 3.3:-86912171 MS.gene014935:CDS
TGCCTCCTTGAGTCACATTT+AGG 0.292586 3.3:+86910650 None:intergenic
GGATGGGAAATTCCTACTAT+TGG 0.294555 3.3:-86913026 MS.gene014935:CDS
AGATTTAAAACGGGTGGTTT+TGG 0.295033 3.3:-86911107 MS.gene014935:CDS
GCTACCAGAGGTGAACCTTT+TGG 0.295492 3.3:+86910691 None:intergenic
TAAGATGAATGTTGGCTATC+TGG 0.299440 3.3:-86911339 MS.gene014935:CDS
AAGAAAACAGAAAATATAAA+TGG 0.304802 3.3:-86910349 MS.gene014935:CDS
TTGTTCACAGGGGAAACTTC+TGG 0.310514 3.3:+86910166 None:intergenic
ATCAGATTGGCACAAGCTTA+TGG 0.317813 3.3:-86912089 MS.gene014935:CDS
CGTCTCCATATTGAATTACT+TGG 0.322004 3.3:+86910427 None:intergenic
AAAAGCTCATTACATTCTTC+AGG 0.333198 3.3:+86911245 None:intergenic
ATTAGAGGAAATTTCTGTAT+TGG 0.334978 3.3:+86910576 None:intergenic
TGATCACTCAACTTTATTAT+GGG 0.343974 3.3:-86912800 MS.gene014935:CDS
TTGAGTGATCAAATCATTGT+AGG 0.359138 3.3:+86912812 None:intergenic
AAGGCCAAGACTATTATTAG+AGG 0.373292 3.3:+86910561 None:intergenic
TGGAAGGAGTATTGGGTGTT+AGG 0.378795 3.3:-86913577 MS.gene014935:CDS
CGTTGTTTATTCTATGTTCA+AGG 0.381373 3.3:+86912133 None:intergenic
GCCACTCACATGGGATCTTT+GGG 0.382157 3.3:-86912202 MS.gene014935:CDS
TCTTGGCCTTGAAAGCTTCT+GGG 0.382812 3.3:-86910548 MS.gene014935:CDS
ATTCATTGGATTTGTTGTTT+GGG 0.383506 3.3:-86912157 MS.gene014935:CDS
AAGTAATGAGCTGAGATTCT+TGG 0.388859 3.3:+86911276 None:intergenic
CCATGTGAGTGGCTTCAAAA+AGG 0.389028 3.3:+86912212 None:intergenic
CTCTGGTAGCAGACATTTCA+AGG 0.390581 3.3:-86910678 MS.gene014935:CDS
AAAGATTAGGAGTGCTAATA+GGG 0.396128 3.3:+86910498 None:intergenic
TTACCTTAGCAAAACAAATT+GGG 0.396754 3.3:-86913685 MS.gene014935:CDS
ACTAGATTTAATGGTCTTAG+TGG 0.396942 3.3:-86913272 MS.gene014935:CDS
TACATCAGCACAAACACATT+TGG 0.398481 3.3:-86910462 MS.gene014935:CDS
ATAATCCAAGTAATTCAATA+TGG 0.398624 3.3:-86910432 MS.gene014935:CDS
CTCATTGTAACCAAATTTAG+TGG 0.401817 3.3:+86913385 None:intergenic
TGATGAGTCAAGGCTATGTT+TGG 0.402077 3.3:-86913661 MS.gene014935:CDS
AAAGACCCCAGAAGCTTTCA+AGG 0.404234 3.3:+86910542 None:intergenic
TCAGAACTTTGATGCGGTGG+TGG 0.404424 3.3:-86912352 MS.gene014935:intron
GATGGGAAATTCCTACTATT+GGG 0.406766 3.3:-86913025 MS.gene014935:CDS
TGCATTAGCAATGGCTATTG+AGG 0.408558 3.3:-86913423 MS.gene014935:CDS
AGTGGTGATTTCAATGTTGT+TGG 0.410007 3.3:-86913254 MS.gene014935:CDS
GCTATTGAGGAAGTTGGAAT+TGG 0.411599 3.3:-86913410 MS.gene014935:CDS
GAATCAATGGAAGGAGTATT+GGG 0.414833 3.3:-86913584 MS.gene014935:CDS
AGCAAAGACCATAGTTGAAA+AGG 0.419810 3.3:+86912062 None:intergenic
GTAGGAATTTCCCATCCCTT+TGG 0.420382 3.3:+86913032 None:intergenic
TTGGATAGCAACCGATAGTA+TGG 0.420520 3.3:-86913642 MS.gene014935:CDS
ATTAGCACTCCTAATCTTTG+TGG 0.423040 3.3:-86910494 MS.gene014935:CDS
AAGATTTGTGGTGGTTATAT+GGG 0.425424 3.3:-86911471 MS.gene014935:CDS
TTCATAAAAGGAAGTGCAAA+TGG 0.428259 3.3:-86911224 MS.gene014935:CDS
TCATCTTATTCTTTAGAAGT+TGG 0.431478 3.3:+86911354 None:intergenic
GTTAGAAATTTGGACACAAA+AGG 0.435100 3.3:-86913140 MS.gene014935:CDS
GGAATCAATGGAAGGAGTAT+TGG 0.436571 3.3:-86913585 MS.gene014935:CDS
ACAATGCCATACACAGAATC+TGG 0.438361 3.3:-86912285 MS.gene014935:CDS
CTAAATGGACTAGGTGGATA+AGG 0.447867 3.3:+86910265 None:intergenic
GCAAATGGAACAAACTCATA+TGG 0.447896 3.3:+86912861 None:intergenic
GGTTGAGCCAAGATTTAAAA+CGG 0.451460 3.3:-86911117 MS.gene014935:CDS
AACTCATATGGTAATGCATA+AGG 0.456420 3.3:+86912873 None:intergenic
TCACCATCAGGCTTTGCAAA+TGG 0.456931 3.3:+86912846 None:intergenic
TAGATGATCTCGTGTTGCTT+GGG 0.457998 3.3:+86910129 None:intergenic
ATAGATGATCTCGTGTTGCT+TGG 0.460591 3.3:+86910128 None:intergenic
AAATTTGTGTCAACAAGTGT+TGG 0.461667 3.3:+86913482 None:intergenic
GCACAAAATGGTGAGAAATT+GGG 0.464067 3.3:-86913311 MS.gene014935:CDS
CTAGGTGGATAAGGTGTACC+TGG 0.468506 3.3:+86910274 None:intergenic
TTCTTCTTCAAAGTATGTCA+TGG 0.471946 3.3:-86911138 MS.gene014935:CDS
TATGAAATAATTAATGTGAT+TGG 0.474278 3.3:-86913209 MS.gene014935:CDS
CAGAACTTTGATGCGGTGGT+GGG 0.476644 3.3:-86912351 MS.gene014935:CDS
TTATAATGTGAGGGAATCAA+TGG 0.479009 3.3:-86913597 MS.gene014935:CDS
GTCACACCAGATTCTGTGTA+TGG 0.482816 3.3:+86912279 None:intergenic
CCAAGAAATTGCTTAACATA+GGG 0.484014 3.3:+86911173 None:intergenic
GAAACGTTACCACAAAGATT+AGG 0.484191 3.3:+86910485 None:intergenic
TTAATTTCACAGTTGTTCAC+AGG 0.488033 3.3:+86910154 None:intergenic
CCTAAATCATCATCATGATA+AGG 0.490096 3.3:+86910313 None:intergenic
CTTGGGGTAATCATGTGGCC+AGG 0.494176 3.3:-86913071 MS.gene014935:CDS
TGGTTAACGTCTGTAATAGC+TGG 0.497231 3.3:+86911374 None:intergenic
TCCAAGAAATTGCTTAACAT+AGG 0.508982 3.3:+86911172 None:intergenic
ATTTCCTCTAATAATAGTCT+TGG 0.512414 3.3:-86910565 MS.gene014935:CDS
TGAACTCTATTCCAAAGGGA+TGG 0.512593 3.3:-86913043 MS.gene014935:CDS
GCAATGGCTATTGAGGAAGT+TGG 0.514964 3.3:-86913416 MS.gene014935:CDS
GTTCCCGCCATCTCACCATC+AGG 0.517404 3.3:+86912834 None:intergenic
GAACTTTGATGCGGTGGTGG+GGG 0.518222 3.3:-86912349 MS.gene014935:CDS
TGATGATTTAGGTGCGGTAG+AGG 0.522774 3.3:-86910302 MS.gene014935:CDS
GTTGAGCCAAGATTTAAAAC+GGG 0.524047 3.3:-86911116 MS.gene014935:CDS
GAGTAACTTGGCAAGATTTG+TGG 0.524831 3.3:-86911483 MS.gene014935:CDS
GGAATAGAGTTCATATCCCC+TGG 0.528712 3.3:+86913053 None:intergenic
CTCAACTTCTTCCCAATAGT+AGG 0.530247 3.3:+86913014 None:intergenic
GACGAATTGAAGTCATGGTT+AGG 0.530841 3.3:-86910408 MS.gene014935:CDS
GTGCACATGTCACCAAGTCT+TGG 0.532508 3.3:-86913719 MS.gene014935:CDS
CTACTATTGGGAAGAAGTTG+AGG 0.532909 3.3:-86913013 MS.gene014935:CDS
TAATTAATGTGATTGGTGAT+GGG 0.533125 3.3:-86913202 MS.gene014935:CDS
AATTTGTAGGCATTCCCAAA+AGG 0.535074 3.3:-86910706 MS.gene014935:intron
CTAAAGAATAAGATGAATGT+TGG 0.535880 3.3:-86911347 MS.gene014935:CDS
AGAACTTTGATGCGGTGGTG+GGG 0.537141 3.3:-86912350 MS.gene014935:CDS
GATCACTCAACTTTATTATG+GGG 0.541790 3.3:-86912799 MS.gene014935:intron
ATAATTAATGTGATTGGTGA+TGG 0.544016 3.3:-86913203 MS.gene014935:CDS
GGTGCGGTAGAGGCCTCTCC+AGG 0.545355 3.3:-86910292 MS.gene014935:CDS
TCAGTTTGACTAAATGGACT+AGG 0.546319 3.3:+86910256 None:intergenic
TTCCCTCACATTATAACTCA+AGG 0.547803 3.3:+86913604 None:intergenic
TTCCTTGAGTTATAATGTGA+GGG 0.548152 3.3:-86913606 MS.gene014935:CDS
AAAAGTTTAGAGCCAAGACT+TGG 0.551066 3.3:+86913707 None:intergenic
GAACTCTATTCCAAAGGGAT+GGG 0.551466 3.3:-86913042 MS.gene014935:CDS
GGTGATTTCAATGTTGTTGG+TGG 0.552700 3.3:-86913251 MS.gene014935:CDS
GATATGAACTCTATTCCAAA+GGG 0.552824 3.3:-86913047 MS.gene014935:CDS
ATTGGGAAGAAGTTGAGGAT+AGG 0.555492 3.3:-86913008 MS.gene014935:CDS
GAATAAATTAGCCATACTAT+CGG 0.555646 3.3:+86913631 None:intergenic
TGAGAACAATTGAGAATGCA+TGG 0.556111 3.3:-86910624 MS.gene014935:CDS
GGACCAACCTCTCATCAGAT+TGG 0.557408 3.3:-86912102 MS.gene014935:CDS
CTTGGCCTTGAAAGCTTCTG+GGG 0.560766 3.3:-86910547 MS.gene014935:CDS
GTGCCAATCTGATGAGAGGT+TGG 0.561854 3.3:+86912099 None:intergenic
ATTCCTTGAGTTATAATGTG+AGG 0.565592 3.3:-86913607 MS.gene014935:CDS
TTGGGGTAATCATGTGGCCA+GGG 0.567541 3.3:-86913070 MS.gene014935:CDS
ATTCCCAAAAGGTTCACCTC+TGG 0.569784 3.3:-86910695 MS.gene014935:CDS
AAGCCTGATGGTGAGATGGC+GGG 0.571630 3.3:-86912837 MS.gene014935:CDS
GTTCCATTTGCAAAGCCTGA+TGG 0.580207 3.3:-86912849 MS.gene014935:CDS
GTGCACAACAAATACTCTAG+TGG 0.583204 3.3:+86913736 None:intergenic
CATTGATGTCTTCAAAGCTG+TGG 0.588475 3.3:-86912907 MS.gene014935:CDS
TGCACAACAAATACTCTAGT+GGG 0.590633 3.3:+86913737 None:intergenic
CATTGTGAAATCAACATAGT+CGG 0.591849 3.3:+86912302 None:intergenic
TGCTACAATTGCATTAGCAA+TGG 0.595360 3.3:-86913432 MS.gene014935:CDS
AGAGAGAGTAGTGAGTAACT+TGG 0.600457 3.3:-86911495 MS.gene014935:CDS
GTGATTTCAATGTTGTTGGT+GGG 0.601031 3.3:-86913250 MS.gene014935:CDS
ATGAATGTTGGCTATCTGGA+AGG 0.602535 3.3:-86911335 MS.gene014935:CDS
ACTAATTCAACACTAGCCAC+TGG 0.602738 3.3:-86912936 MS.gene014935:CDS
ATGGAGACGAATTGAAGTCA+TGG 0.605611 3.3:-86910413 MS.gene014935:CDS
TAATTTCACAGTTGTTCACA+GGG 0.607703 3.3:+86910155 None:intergenic
GGATCAGAACTTTGATGCGG+TGG 0.608343 3.3:-86912355 MS.gene014935:intron
AATTAATGTGATTGGTGATG+GGG 0.612269 3.3:-86913201 MS.gene014935:CDS
GGATATGAACTCTATTCCAA+AGG 0.613437 3.3:-86913048 MS.gene014935:CDS
CAAATTGGGATGATGAGTCA+AGG 0.617011 3.3:-86913671 MS.gene014935:CDS
GCAATCCTAAATGTGACTCA+AGG 0.617571 3.3:-86910655 MS.gene014935:CDS
TGCAAAGCCTGATGGTGAGA+TGG 0.620042 3.3:-86912841 MS.gene014935:CDS
TGGGGTAATCATGTGGCCAG+GGG 0.623869 3.3:-86913069 MS.gene014935:CDS
TTTCTAACAAACCCTTCATG+TGG 0.624401 3.3:+86913155 None:intergenic
CACAGAATCTGGTGTGACAA+TGG 0.627498 3.3:-86912274 MS.gene014935:CDS
AATGTGAGGGAATCAATGGA+AGG 0.632436 3.3:-86913593 MS.gene014935:CDS
TGGATAAGGTGTACCTGGAG+AGG 0.633371 3.3:+86910279 None:intergenic
ATGATCTTGGGGTAATCATG+TGG 0.635275 3.3:-86913076 MS.gene014935:CDS
GAGCCAAGATTTAAAACGGG+TGG 0.636705 3.3:-86911113 MS.gene014935:CDS
AGAATAAACAACGATTTCAG+AGG 0.640862 3.3:-86912123 MS.gene014935:CDS
TGATGTCTTCAAAGCTGTGG+TGG 0.644862 3.3:-86912904 MS.gene014935:CDS
GTTTGACTAAATGGACTAGG+TGG 0.645627 3.3:+86910259 None:intergenic
ACCCAAAGATCCCATGTGAG+TGG 0.646306 3.3:+86912201 None:intergenic
TCATGATGATGATTTAGGTG+CGG 0.658204 3.3:-86910308 MS.gene014935:CDS
TAACTTGGCAAGATTTGTGG+TGG 0.662110 3.3:-86911480 MS.gene014935:CDS
ATAAAAGGAAGTGCAAATGG+TGG 0.667432 3.3:-86911221 MS.gene014935:CDS
ATCCTAAATGTGACTCAAGG+AGG 0.671234 3.3:-86910652 MS.gene014935:CDS
TTTGGATCAGAACTTTGATG+CGG 0.679944 3.3:-86912358 MS.gene014935:intron
TCTGGTAGCAGACATTTCAA+GGG 0.681450 3.3:-86910677 MS.gene014935:CDS
GACATCAATGCAGAAGCCAG+TGG 0.681497 3.3:+86912920 None:intergenic
AAAGCCTGATGGTGAGATGG+CGG 0.684105 3.3:-86912838 MS.gene014935:CDS
CTTGAAATGTCTGCTACCAG+AGG 0.702261 3.3:+86910679 None:intergenic
GCTTGTGCCAATCTGATGAG+AGG 0.718185 3.3:+86912095 None:intergenic
AATTTCACAGTTGTTCACAG+GGG 0.729956 3.3:+86910156 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATGACATTTTATTATTTAA+TGG + chr3.3:86911312-86911331 None:intergenic 10.0%
!! AAGAAAACAGAAAATATAAA+TGG - chr3.3:86913526-86913545 MS.gene014935:CDS 15.0%
!! AATTATGATGACATTATATT+AGG + chr3.3:86912834-86912853 None:intergenic 15.0%
!! ATTATGATGACATTATATTA+GGG + chr3.3:86912833-86912852 None:intergenic 15.0%
!! TATGAAATAATTAATGTGAT+TGG - chr3.3:86910666-86910685 MS.gene014935:CDS 15.0%
!!! TTAAAAGTATACTAAGAATT+TGG + chr3.3:86911174-86911193 None:intergenic 15.0%
!!! TTGTTTATTTATTTCTCATT+TGG - chr3.3:86913034-86913053 MS.gene014935:CDS 15.0%
!! AAGTTATTCTATCACAAATT+AGG - chr3.3:86912054-86912073 MS.gene014935:intron 20.0%
!! ATAATCCAAGTAATTCAATA+TGG - chr3.3:86913443-86913462 MS.gene014935:CDS 20.0%
!! TATAGAAATCTAGAGAAAAT+AGG - chr3.3:86912228-86912247 MS.gene014935:CDS 20.0%
!! TATGAAATATGTGAACTTTA+TGG - chr3.3:86911196-86911215 MS.gene014935:CDS 20.0%
!! TGAAATAACCTAAAAATCAT+AGG - chr3.3:86911471-86911490 MS.gene014935:CDS 20.0%
!! TTGTTAAACACTAGATTTAA+TGG - chr3.3:86910594-86910613 MS.gene014935:CDS 20.0%
!!! ATACCAAAATTTTCAAAAGT+AGG + chr3.3:86910543-86910562 None:intergenic 20.0%
!!! ATTTGAACATTTTTGGAATA+TGG - chr3.3:86910412-86910431 MS.gene014935:CDS 20.0%
!!! TTTGAACATTTTTGGAATAT+GGG - chr3.3:86910413-86910432 MS.gene014935:CDS 20.0%
! AACTTATACATGAACACTTA+TGG + chr3.3:86912039-86912058 None:intergenic 25.0%
! AATCTAGAGAAAATAGGTTA+TGG - chr3.3:86912234-86912253 MS.gene014935:CDS 25.0%
! AGTATCACAAGTATTTACAT+CGG - chr3.3:86912291-86912310 MS.gene014935:CDS 25.0%
! AGTTTATCACAAACCATATT+TGG + chr3.3:86912107-86912126 None:intergenic 25.0%
! ATAATTAATGTGATTGGTGA+TGG - chr3.3:86910672-86910691 MS.gene014935:CDS 25.0%
! ATGCATGAAATTGTAAGAAA+TGG - chr3.3:86911247-86911266 MS.gene014935:CDS 25.0%
! ATTAGAGGAAATTTCTGTAT+TGG + chr3.3:86913302-86913321 None:intergenic 25.0%
! ATTTCCTCTAATAATAGTCT+TGG - chr3.3:86913310-86913329 MS.gene014935:CDS 25.0%
! CATTCACATATATAAGATCA+GGG + chr3.3:86911126-86911145 None:intergenic 25.0%
! CTAAAGAATAAGATGAATGT+TGG - chr3.3:86912528-86912547 MS.gene014935:intron 25.0%
! GAACTTTATGGTTTCTTTAT+TGG - chr3.3:86911208-86911227 MS.gene014935:CDS 25.0%
! GAATAAATTAGCCATACTAT+CGG + chr3.3:86910247-86910266 None:intergenic 25.0%
! TCACAAATTAGGAAAGATTT+AGG - chr3.3:86912065-86912084 MS.gene014935:CDS 25.0%
! TCATTCACATATATAAGATC+AGG + chr3.3:86911127-86911146 None:intergenic 25.0%
! TGATCACTCAACTTTATTAT+GGG - chr3.3:86911075-86911094 MS.gene014935:intron 25.0%
! TTACCTTAGCAAAACAAATT+GGG - chr3.3:86910190-86910209 MS.gene014935:CDS 25.0%
! TTGACTAAAATCTCCATAAA+AGG + chr3.3:86913656-86913675 None:intergenic 25.0%
! TTGATCACTCAACTTTATTA+TGG - chr3.3:86911074-86911093 MS.gene014935:intron 25.0%
! TTTACCTTAGCAAAACAAAT+TGG - chr3.3:86910189-86910208 MS.gene014935:CDS 25.0%
! TTTGATTCAGTTTGACTAAA+TGG + chr3.3:86913628-86913647 None:intergenic 25.0%
!! AGTATGTTAGGTTTGAATTT+TGG + chr3.3:86912876-86912895 None:intergenic 25.0%
!! CTACTTCTAAAAATGATCTT+GGG - chr3.3:86910787-86910806 MS.gene014935:intron 25.0%
!! GAATCAAATGTTTCCTTTTA+TGG - chr3.3:86913640-86913659 MS.gene014935:CDS 25.0%
!! GACACAAATTTGAACATTTT+TGG - chr3.3:86910405-86910424 MS.gene014935:CDS 25.0%
!! TAATTAATGTGATTGGTGAT+GGG - chr3.3:86910673-86910692 MS.gene014935:CDS 25.0%
!! TACTTCTAAAAATGATCTTG+GGG - chr3.3:86910788-86910807 MS.gene014935:intron 25.0%
!! TCATCTTATTCTTTAGAAGT+TGG + chr3.3:86912524-86912543 None:intergenic 25.0%
!! TCTACTTCTAAAAATGATCT+TGG - chr3.3:86910786-86910805 MS.gene014935:intron 25.0%
!! TGAATTGGTTCAACTATTAT+TGG - chr3.3:86912948-86912967 MS.gene014935:CDS 25.0%
!! TGTAATGAGCTTTTCATAAA+AGG - chr3.3:86912639-86912658 MS.gene014935:intron 25.0%
!! TTTTAAACTCTCAAAGAGTA+GGG + chr3.3:86911283-86911302 None:intergenic 25.0%
!! TTTTAGTCAAAGCATAGAAA+TGG - chr3.3:86913666-86913685 MS.gene014935:CDS 25.0%
!! TTTTTAAACTCTCAAAGAGT+AGG + chr3.3:86911284-86911303 None:intergenic 25.0%
!!! AATTTTGGTATTGCACAAAA+TGG - chr3.3:86910552-86910571 MS.gene014935:CDS 25.0%
!!! ATGCCTACTTTTGAAAATTT+TGG - chr3.3:86910537-86910556 MS.gene014935:CDS 25.0%
!!! ATTCATTGGATTTGTTGTTT+GGG - chr3.3:86911718-86911737 MS.gene014935:intron 25.0%
!!! TATTCATTGGATTTGTTGTT+TGG - chr3.3:86911717-86911736 MS.gene014935:intron 25.0%
!!! TTAGTTAGCCTATGATTTTT+AGG + chr3.3:86911482-86911501 None:intergenic 25.0%
!!! TTTTGTTTATGGAATCTTGA+AGG - chr3.3:86912566-86912585 MS.gene014935:intron 25.0%
AAAAGCTCATTACATTCTTC+AGG + chr3.3:86912633-86912652 None:intergenic 30.0%
AAATTTGTGTCAACAAGTGT+TGG + chr3.3:86910396-86910415 None:intergenic 30.0%
AAGATTTGTGGTGGTTATAT+GGG - chr3.3:86912404-86912423 MS.gene014935:intron 30.0%
ACAACAGAAAGAAAAATGCA+TGG - chr3.3:86911639-86911658 MS.gene014935:intron 30.0%
ACTCATTGAATCAGTATGTT+AGG + chr3.3:86912888-86912907 None:intergenic 30.0%
AGAATAAACAACGATTTCAG+AGG - chr3.3:86911752-86911771 MS.gene014935:intron 30.0%
ATTCCTTGAGTTATAATGTG+AGG - chr3.3:86910268-86910287 MS.gene014935:CDS 30.0%
CAACAGAAAGAAAAATGCAT+GGG - chr3.3:86911640-86911659 MS.gene014935:intron 30.0%
CATTGTGAAATCAACATAGT+CGG + chr3.3:86911576-86911595 None:intergenic 30.0%
CCAAGAAATTGCTTAACATA+GGG + chr3.3:86912705-86912724 None:intergenic 30.0%
CCTAAATCATCATCATGATA+AGG + chr3.3:86913565-86913584 None:intergenic 30.0%
CGTTGTTTATTCTATGTTCA+AGG + chr3.3:86911745-86911764 None:intergenic 30.0%
CTCATTGTAACCAAATTTAG+TGG + chr3.3:86910493-86910512 None:intergenic 30.0%
CTTCTAGGTTATAGTTCAAT+TGG + chr3.3:86913076-86913095 None:intergenic 30.0%
GATATGAACTCTATTCCAAA+GGG - chr3.3:86910828-86910847 MS.gene014935:intron 30.0%
GATCACTCAACTTTATTATG+GGG - chr3.3:86911076-86911095 MS.gene014935:intron 30.0%
GCTTGTTCATTTGTATTCAT+TGG - chr3.3:86911704-86911723 MS.gene014935:intron 30.0%
GTTAGAAATTTGGACACAAA+AGG - chr3.3:86910735-86910754 MS.gene014935:intron 30.0%
TAATTTCACAGTTGTTCACA+GGG + chr3.3:86913723-86913742 None:intergenic 30.0%
TCCAAGAAATTGCTTAACAT+AGG + chr3.3:86912706-86912725 None:intergenic 30.0%
TCCAAGAACAAAAAAACTAG+AGG - chr3.3:86910329-86910348 MS.gene014935:CDS 30.0%
TTAATTTCACAGTTGTTCAC+AGG + chr3.3:86913724-86913743 None:intergenic 30.0%
TTACTGACAAAGTAGTCATT+AGG + chr3.3:86911412-86911431 None:intergenic 30.0%
TTATAATGTGAGGGAATCAA+TGG - chr3.3:86910278-86910297 MS.gene014935:CDS 30.0%
TTCCTTGAGTTATAATGTGA+GGG - chr3.3:86910269-86910288 MS.gene014935:CDS 30.0%
TTCTTCTTCAAAGTATGTCA+TGG - chr3.3:86912737-86912756 MS.gene014935:intron 30.0%
TTGAGTGATCAAATCATTGT+AGG + chr3.3:86911066-86911085 None:intergenic 30.0%
! AACTCATATGGTAATGCATA+AGG + chr3.3:86911005-86911024 None:intergenic 30.0%
! ACTAGATTTAATGGTCTTAG+TGG - chr3.3:86910603-86910622 MS.gene014935:CDS 30.0%
! ACTGATTCAATGAGTTGAAT+TGG - chr3.3:86912893-86912912 MS.gene014935:CDS 30.0%
! AGTACTAACTTGACTTTTGT+GGG - chr3.3:86913142-86913161 MS.gene014935:CDS 30.0%
! ATGGTTTTCCTTTTCAACTA+TGG - chr3.3:86911805-86911824 MS.gene014935:intron 30.0%
! CCTTATCATGATGATGATTT+AGG - chr3.3:86913562-86913581 MS.gene014935:CDS 30.0%
! TTCAAGTAATCCGCAATTTT+TGG + chr3.3:86911992-86912011 None:intergenic 30.0%
! TTCATAAAAGGAAGTGCAAA+TGG - chr3.3:86912651-86912670 MS.gene014935:intron 30.0%
!! AAAGATTAGGAGTGCTAATA+GGG + chr3.3:86913380-86913399 None:intergenic 30.0%
!! AACCATCACATTTTAATCAC+AGG - chr3.3:86912357-86912376 MS.gene014935:intron 30.0%
!! AATTAATGTGATTGGTGATG+GGG - chr3.3:86910674-86910693 MS.gene014935:CDS 30.0%
!! TAGTTATCTCCATTTTTCAC+TGG + chr3.3:86910897-86910916 None:intergenic 30.0%
!! TGAAGGGTTTGTTAGAAATT+TGG - chr3.3:86910725-86910744 MS.gene014935:intron 30.0%
!!! GGTTTTTGTGGTTCTAATTT+TGG - chr3.3:86912425-86912444 MS.gene014935:intron 30.0%
!!! TAGAGGATTTTAGAGTTAGA+TGG - chr3.3:86910346-86910365 MS.gene014935:CDS 30.0%
!!! TCCTCTAGTTTTTTTGTTCT+TGG + chr3.3:86910333-86910352 None:intergenic 30.0%
AAGGCCAAGACTATTATTAG+AGG + chr3.3:86913317-86913336 None:intergenic 35.0%
AAGTAATGAGCTGAGATTCT+TGG + chr3.3:86912602-86912621 None:intergenic 35.0%
AAGTTTATCCCACTACTAAG+TGG + chr3.3:86912161-86912180 None:intergenic 35.0%
AATTTCACAGTTGTTCACAG+GGG + chr3.3:86913722-86913741 None:intergenic 35.0%
AATTTGTAGGCATTCCCAAA+AGG - chr3.3:86913169-86913188 MS.gene014935:CDS 35.0%
AGCAAAGACCATAGTTGAAA+AGG + chr3.3:86911816-86911835 None:intergenic 35.0%
AGTGGTGATTTCAATGTTGT+TGG - chr3.3:86910621-86910640 MS.gene014935:CDS 35.0%
AGTTTATCCCACTACTAAGT+GGG + chr3.3:86912160-86912179 None:intergenic 35.0%
ATTAGCACTCCTAATCTTTG+TGG - chr3.3:86913381-86913400 MS.gene014935:CDS 35.0%
CAAGATTTGTGGTGGTTATA+TGG - chr3.3:86912403-86912422 MS.gene014935:intron 35.0%
CAATCTCGTTCCAAAAATTG+CGG - chr3.3:86911979-86911998 MS.gene014935:intron 35.0%
CCCTATGTTAAGCAATTTCT+TGG - chr3.3:86912702-86912721 MS.gene014935:intron 35.0%
CGTCTCCATATTGAATTACT+TGG + chr3.3:86913451-86913470 None:intergenic 35.0%
CTCCTGTGATTAAAATGTGA+TGG + chr3.3:86912362-86912381 None:intergenic 35.0%
GAAACGTTACCACAAAGATT+AGG + chr3.3:86913393-86913412 None:intergenic 35.0%
GATGGGAAATTCCTACTATT+GGG - chr3.3:86910850-86910869 MS.gene014935:intron 35.0%
GCAAATGGAACAAACTCATA+TGG + chr3.3:86911017-86911036 None:intergenic 35.0%
GCACAAAATGGTGAGAAATT+GGG - chr3.3:86910564-86910583 MS.gene014935:CDS 35.0%
GGATATGAACTCTATTCCAA+AGG - chr3.3:86910827-86910846 MS.gene014935:intron 35.0%
GGTTGAGCCAAGATTTAAAA+CGG - chr3.3:86912758-86912777 MS.gene014935:intron 35.0%
GTGATTTCAATGTTGTTGGT+GGG - chr3.3:86910625-86910644 MS.gene014935:CDS 35.0%
TACATCAGCACAAACACATT+TGG - chr3.3:86913413-86913432 MS.gene014935:CDS 35.0%
TCAATTCAAATACGCTCTCA+CGG - chr3.3:86912332-86912351 MS.gene014935:CDS 35.0%
TGAGAACAATTGAGAATGCA+TGG - chr3.3:86913251-86913270 MS.gene014935:CDS 35.0%
TGCACAAAATGGTGAGAAAT+TGG - chr3.3:86910563-86910582 MS.gene014935:CDS 35.0%
TGCACAACAAATACTCTAGT+GGG + chr3.3:86910141-86910160 None:intergenic 35.0%
TGCTACAATTGCATTAGCAA+TGG - chr3.3:86910443-86910462 MS.gene014935:CDS 35.0%
TTAGGAGACCTAAAATCCAT+AGG + chr3.3:86911394-86911413 None:intergenic 35.0%
TTCCCTCACATTATAACTCA+AGG + chr3.3:86910274-86910293 None:intergenic 35.0%
TTTCTAACAAACCCTTCATG+TGG + chr3.3:86910723-86910742 None:intergenic 35.0%
TTTGGATCAGAACTTTGATG+CGG - chr3.3:86911517-86911536 MS.gene014935:intron 35.0%
! AAAAGTTTAGAGCCAAGACT+TGG + chr3.3:86910171-86910190 None:intergenic 35.0%
! ATAAAAGGAAGTGCAAATGG+TGG - chr3.3:86912654-86912673 MS.gene014935:intron 35.0%
! GAGTACTAACTTGACTTTTG+TGG - chr3.3:86913141-86913160 MS.gene014935:CDS 35.0%
! GTACTAACTTGACTTTTGTG+GGG - chr3.3:86913143-86913162 MS.gene014935:CDS 35.0%
! GTTGAGCCAAGATTTAAAAC+GGG - chr3.3:86912759-86912778 MS.gene014935:intron 35.0%
! TAACTAGTCCATGGTGATTT+TGG - chr3.3:86911499-86911518 MS.gene014935:CDS 35.0%
! TAAGATGAATGTTGGCTATC+TGG - chr3.3:86912536-86912555 MS.gene014935:intron 35.0%
! TACTAACTTGACTTTTGTGG+GGG - chr3.3:86913144-86913163 MS.gene014935:CDS 35.0%
! TCAGTTTGACTAAATGGACT+AGG + chr3.3:86913622-86913641 None:intergenic 35.0%
! TCATGATGATGATTTAGGTG+CGG - chr3.3:86913567-86913586 MS.gene014935:CDS 35.0%
! TGATGAGTTGGATCCAAATA+TGG - chr3.3:86912091-86912110 MS.gene014935:CDS 35.0%
!! AAACCACCCGTTTTAAATCT+TGG + chr3.3:86912768-86912787 None:intergenic 35.0%
!! AGATTTAAAACGGGTGGTTT+TGG - chr3.3:86912768-86912787 MS.gene014935:intron 35.0%
!! AGATTTAGGCATTGATGAGT+TGG - chr3.3:86912079-86912098 MS.gene014935:CDS 35.0%
!! ATAGGAGTACCAGTGAAAAA+TGG - chr3.3:86910885-86910904 MS.gene014935:intron 35.0%
!! CAAAGATTAGGAGTGCTAAT+AGG + chr3.3:86913381-86913400 None:intergenic 35.0%
!! CTGATTTGCCTATGGATTTT+AGG - chr3.3:86911383-86911402 MS.gene014935:CDS 35.0%
!! CTGGAAGGTTCTTTTGTTTA+TGG - chr3.3:86912555-86912574 MS.gene014935:intron 35.0%
!! GAATCAATGGAAGGAGTATT+GGG - chr3.3:86910291-86910310 MS.gene014935:CDS 35.0%
!! GCTGTTTTCAAAAGCTATCA+TGG - chr3.3:86912199-86912218 MS.gene014935:CDS 35.0%
!!! CATCCCAATTTGTTTTGCTA+AGG + chr3.3:86910196-86910215 None:intergenic 35.0%
AAATCAGTTGCCACTCACAT+CGG + chr3.3:86911370-86911389 None:intergenic 40.0%
AATGTGAGGGAATCAATGGA+AGG - chr3.3:86910282-86910301 MS.gene014935:CDS 40.0%
ACAATGCCATACACAGAATC+TGG - chr3.3:86911590-86911609 MS.gene014935:intron 40.0%
ACTAATTCAACACTAGCCAC+TGG - chr3.3:86910939-86910958 MS.gene014935:intron 40.0%
AGAGAGAGTAGTGAGTAACT+TGG - chr3.3:86912380-86912399 MS.gene014935:intron 40.0%
AGTTGATCCCACTTAGTAGT+GGG - chr3.3:86912150-86912169 MS.gene014935:CDS 40.0%
ATCAAACCAATGCGACTTCT+AGG + chr3.3:86913091-86913110 None:intergenic 40.0%
ATCAGATTGGCACAAGCTTA+TGG - chr3.3:86911786-86911805 MS.gene014935:intron 40.0%
ATCCTAAATGTGACTCAAGG+AGG - chr3.3:86913223-86913242 MS.gene014935:CDS 40.0%
ATGATCTTGGGGTAATCATG+TGG - chr3.3:86910799-86910818 MS.gene014935:intron 40.0%
ATGGAGACGAATTGAAGTCA+TGG - chr3.3:86913462-86913481 MS.gene014935:CDS 40.0%
ATTGGGAAGAAGTTGAGGAT+AGG - chr3.3:86910867-86910886 MS.gene014935:intron 40.0%
CAAATTGGGATGATGAGTCA+AGG - chr3.3:86910204-86910223 MS.gene014935:CDS 40.0%
CAACCAGACTGCAATTGATT+GGG + chr3.3:86912925-86912944 None:intergenic 40.0%
CATTGATGTCTTCAAAGCTG+TGG - chr3.3:86910968-86910987 MS.gene014935:intron 40.0%
CTACTATTGGGAAGAAGTTG+AGG - chr3.3:86910862-86910881 MS.gene014935:intron 40.0%
CTATAACCTAGAAGTCGCAT+TGG - chr3.3:86913082-86913101 MS.gene014935:CDS 40.0%
CTCAACTTCTTCCCAATAGT+AGG + chr3.3:86910864-86910883 None:intergenic 40.0%
GAACTCTATTCCAAAGGGAT+GGG - chr3.3:86910833-86910852 MS.gene014935:intron 40.0%
GACGAATTGAAGTCATGGTT+AGG - chr3.3:86913467-86913486 MS.gene014935:CDS 40.0%
GAGTAACTTGGCAAGATTTG+TGG - chr3.3:86912392-86912411 MS.gene014935:intron 40.0%
GCAATCCTAAATGTGACTCA+AGG - chr3.3:86913220-86913239 MS.gene014935:CDS 40.0%
GCAGTCTGGTTGAATTGAAT+TGG - chr3.3:86912933-86912952 MS.gene014935:CDS 40.0%
GCTATTGAGGAAGTTGGAAT+TGG - chr3.3:86910465-86910484 MS.gene014935:CDS 40.0%
GGAATTGGAGCCACTAAATT+TGG - chr3.3:86910480-86910499 MS.gene014935:CDS 40.0%
GGATGGGAAATTCCTACTAT+TGG - chr3.3:86910849-86910868 MS.gene014935:intron 40.0%
GGTGATTTCAATGTTGTTGG+TGG - chr3.3:86910624-86910643 MS.gene014935:CDS 40.0%
GTGCACAACAAATACTCTAG+TGG + chr3.3:86910142-86910161 None:intergenic 40.0%
GTTCTGATCCAAAATCACCA+TGG + chr3.3:86911510-86911529 None:intergenic 40.0%
TAACTTGGCAAGATTTGTGG+TGG - chr3.3:86912395-86912414 MS.gene014935:intron 40.0%
TAGGCTAACTAACTAGTCCA+TGG - chr3.3:86911490-86911509 MS.gene014935:CDS 40.0%
TCAACCAGACTGCAATTGAT+TGG + chr3.3:86912926-86912945 None:intergenic 40.0%
TCTGGTAGCAGACATTTCAA+GGG - chr3.3:86913198-86913217 MS.gene014935:CDS 40.0%
TGAACTCTATTCCAAAGGGA+TGG - chr3.3:86910832-86910851 MS.gene014935:intron 40.0%
TGATGAGTCAAGGCTATGTT+TGG - chr3.3:86910214-86910233 MS.gene014935:CDS 40.0%
TGCATTAGCAATGGCTATTG+AGG - chr3.3:86910452-86910471 MS.gene014935:CDS 40.0%
TGGTTAACGTCTGTAATAGC+TGG + chr3.3:86912504-86912523 None:intergenic 40.0%
TTGGATAGCAACCGATAGTA+TGG - chr3.3:86910233-86910252 MS.gene014935:CDS 40.0%
TTGTTAAAGACCGATGTGAG+TGG - chr3.3:86911357-86911376 MS.gene014935:CDS 40.0%
! ATAGATGATCTCGTGTTGCT+TGG + chr3.3:86913750-86913769 None:intergenic 40.0%
! ATGAATGTTGGCTATCTGGA+AGG - chr3.3:86912540-86912559 MS.gene014935:intron 40.0%
! GATTTTGGACACCACATGAA+GGG - chr3.3:86910709-86910728 MS.gene014935:intron 40.0%
! GGAATCAATGGAAGGAGTAT+TGG - chr3.3:86910290-86910309 MS.gene014935:CDS 40.0%
! GGGAAAAAAGGGTTGGATTT+TGG - chr3.3:86910694-86910713 MS.gene014935:CDS 40.0%
! GGTGGTTATATGGGTTTTTG+TGG - chr3.3:86912413-86912432 MS.gene014935:intron 40.0%
! TTTTGTGGGGGTGAATTTGT+AGG - chr3.3:86913156-86913175 MS.gene014935:CDS 40.0%
!! CATTGGTTTGATTCACGATC+GGG - chr3.3:86913099-86913118 MS.gene014935:CDS 40.0%
!! CTAAATGGACTAGGTGGATA+AGG + chr3.3:86913613-86913632 None:intergenic 40.0%
!! GATTGGTGATGGGGAAAAAA+GGG - chr3.3:86910683-86910702 MS.gene014935:CDS 40.0%
!! GCATTGGTTTGATTCACGAT+CGG - chr3.3:86913098-86913117 MS.gene014935:CDS 40.0%
!! GTTTGACTAAATGGACTAGG+TGG + chr3.3:86913619-86913638 None:intergenic 40.0%
!! TAGATGATCTCGTGTTGCTT+GGG + chr3.3:86913749-86913768 None:intergenic 40.0%
!! TGATTGGTGATGGGGAAAAA+AGG - chr3.3:86910682-86910701 MS.gene014935:CDS 40.0%
!!! CTTTTTGAAGCCACTCACAT+GGG - chr3.3:86911664-86911683 MS.gene014935:intron 40.0%
AAAGACCCCAGAAGCTTTCA+AGG + chr3.3:86913336-86913355 None:intergenic 45.0%
ACTAAGTGGGATCAACTGCA+TGG + chr3.3:86912147-86912166 None:intergenic 45.0%
ATTCCCAAAAGGTTCACCTC+TGG - chr3.3:86913180-86913199 MS.gene014935:CDS 45.0%
CACAGAATCTGGTGTGACAA+TGG - chr3.3:86911601-86911620 MS.gene014935:intron 45.0%
CAGTTGATCCCACTTAGTAG+TGG - chr3.3:86912149-86912168 MS.gene014935:CDS 45.0%
CCATGTGAGTGGCTTCAAAA+AGG + chr3.3:86911666-86911685 None:intergenic 45.0%
CTCTGGTAGCAGACATTTCA+AGG - chr3.3:86913197-86913216 MS.gene014935:CDS 45.0%
CTTGAAATGTCTGCTACCAG+AGG + chr3.3:86913199-86913218 None:intergenic 45.0%
GATCCCAATCAATTGCAGTC+TGG - chr3.3:86912919-86912938 MS.gene014935:CDS 45.0%
GCAATGGCTATTGAGGAAGT+TGG - chr3.3:86910459-86910478 MS.gene014935:CDS 45.0%
GGAATAGAGTTCATATCCCC+TGG + chr3.3:86910825-86910844 None:intergenic 45.0%
GTAGGAATTTCCCATCCCTT+TGG + chr3.3:86910846-86910865 None:intergenic 45.0%
GTCACACCAGATTCTGTGTA+TGG + chr3.3:86911599-86911618 None:intergenic 45.0%
GTTCCATTTGCAAAGCCTGA+TGG - chr3.3:86911026-86911045 MS.gene014935:intron 45.0%
TCACCATCAGGCTTTGCAAA+TGG + chr3.3:86911032-86911051 None:intergenic 45.0%
TGATGATTTAGGTGCGGTAG+AGG - chr3.3:86913573-86913592 MS.gene014935:CDS 45.0%
TGATGTCTTCAAAGCTGTGG+TGG - chr3.3:86910971-86910990 MS.gene014935:intron 45.0%
TGCCTCCTTGAGTCACATTT+AGG + chr3.3:86913228-86913247 None:intergenic 45.0%
TTGTTCACAGGGGAAACTTC+TGG + chr3.3:86913712-86913731 None:intergenic 45.0%
! CTACCAGAGGTGAACCTTTT+GGG + chr3.3:86913186-86913205 None:intergenic 45.0%
! GAGCCAAGATTTAAAACGGG+TGG - chr3.3:86912762-86912781 MS.gene014935:intron 45.0%
! GGATTTTGGACACCACATGA+AGG - chr3.3:86910708-86910727 MS.gene014935:intron 45.0%
! GGGGTCTTTTTCTCATAGCA+GGG - chr3.3:86913347-86913366 MS.gene014935:CDS 45.0%
! TGGGGTCTTTTTCTCATAGC+AGG - chr3.3:86913346-86913365 MS.gene014935:CDS 45.0%
!! AGTGGCAACTGATTTGCCTA+TGG - chr3.3:86911375-86911394 MS.gene014935:CDS 45.0%
!! TCTTGGCCTTGAAAGCTTCT+GGG - chr3.3:86913327-86913346 MS.gene014935:CDS 45.0%
!! TGGAAGGAGTATTGGGTGTT+AGG - chr3.3:86910298-86910317 MS.gene014935:CDS 45.0%
!!! CCTTTTTGAAGCCACTCACA+TGG - chr3.3:86911663-86911682 MS.gene014935:intron 45.0%
ACCCAAAGATCCCATGTGAG+TGG + chr3.3:86911677-86911696 None:intergenic 50.0%
AGAACTTTGATGCGGTGGTG+GGG - chr3.3:86911525-86911544 MS.gene014935:intron 50.0%
AGCCACTCACATGGGATCTT+TGG - chr3.3:86911672-86911691 MS.gene014935:intron 50.0%
CAGAACTTTGATGCGGTGGT+GGG - chr3.3:86911524-86911543 MS.gene014935:intron 50.0%
CTAGGTGGATAAGGTGTACC+TGG + chr3.3:86913604-86913623 None:intergenic 50.0%
GACATCAATGCAGAAGCCAG+TGG + chr3.3:86910958-86910977 None:intergenic 50.0%
GCCACTCACATGGGATCTTT+GGG - chr3.3:86911673-86911692 MS.gene014935:intron 50.0%
GCTTGTGCCAATCTGATGAG+AGG + chr3.3:86911783-86911802 None:intergenic 50.0%
GGACCAACCTCTCATCAGAT+TGG - chr3.3:86911773-86911792 MS.gene014935:intron 50.0%
GGATCAGAACTTTGATGCGG+TGG - chr3.3:86911520-86911539 MS.gene014935:intron 50.0%
GTGCACATGTCACCAAGTCT+TGG - chr3.3:86910156-86910175 MS.gene014935:CDS 50.0%
GTGCCAATCTGATGAGAGGT+TGG + chr3.3:86911779-86911798 None:intergenic 50.0%
TCAGAACTTTGATGCGGTGG+TGG - chr3.3:86911523-86911542 MS.gene014935:intron 50.0%
TGGATAAGGTGTACCTGGAG+AGG + chr3.3:86913599-86913618 None:intergenic 50.0%
TTGGGGTAATCATGTGGCCA+GGG - chr3.3:86910805-86910824 MS.gene014935:intron 50.0%
! AAAGCCTGATGGTGAGATGG+CGG - chr3.3:86911037-86911056 MS.gene014935:intron 50.0%
! GCTACCAGAGGTGAACCTTT+TGG + chr3.3:86913187-86913206 None:intergenic 50.0%
! TGCAAAGCCTGATGGTGAGA+TGG - chr3.3:86911034-86911053 MS.gene014935:intron 50.0%
!! CTTGGCCTTGAAAGCTTCTG+GGG - chr3.3:86913328-86913347 MS.gene014935:CDS 50.0%
!! GGTGATGGGGAAAAAAGGGT+TGG - chr3.3:86910687-86910706 MS.gene014935:CDS 50.0%
!! GTCTTGGCCTTGAAAGCTTC+TGG - chr3.3:86913326-86913345 MS.gene014935:CDS 50.0%
CTTGGGGTAATCATGTGGCC+AGG - chr3.3:86910804-86910823 MS.gene014935:intron 55.0%
TGGGGTAATCATGTGGCCAG+GGG - chr3.3:86910806-86910825 MS.gene014935:intron 55.0%
! AAGCCTGATGGTGAGATGGC+GGG - chr3.3:86911038-86911057 MS.gene014935:intron 55.0%
! GAACTTTGATGCGGTGGTGG+GGG - chr3.3:86911526-86911545 MS.gene014935:intron 55.0%
GTTCCCGCCATCTCACCATC+AGG + chr3.3:86911044-86911063 None:intergenic 60.0%
GGTGCGGTAGAGGCCTCTCC+AGG - chr3.3:86913583-86913602 MS.gene014935:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 86910126 86913771 86910126 ID=MS.gene014935
chr3.3 mRNA 86910126 86913771 86910126 ID=MS.gene014935.t1;Parent=MS.gene014935
chr3.3 exon 86912800 86913771 86912800 ID=MS.gene014935.t1.exon1;Parent=MS.gene014935.t1
chr3.3 CDS 86912800 86913771 86912800 ID=cds.MS.gene014935.t1;Parent=MS.gene014935.t1
chr3.3 exon 86912058 86912370 86912058 ID=MS.gene014935.t1.exon2;Parent=MS.gene014935.t1
chr3.3 CDS 86912058 86912370 86912058 ID=cds.MS.gene014935.t1;Parent=MS.gene014935.t1
chr3.3 exon 86911103 86911518 86911103 ID=MS.gene014935.t1.exon3;Parent=MS.gene014935.t1
chr3.3 CDS 86911103 86911518 86911103 ID=cds.MS.gene014935.t1;Parent=MS.gene014935.t1
chr3.3 exon 86910126 86910719 86910126 ID=MS.gene014935.t1.exon4;Parent=MS.gene014935.t1
chr3.3 CDS 86910126 86910719 86910126 ID=cds.MS.gene014935.t1;Parent=MS.gene014935.t1
Gene Sequence

>MS.gene014935

ATGACTACTATACCCACTAGAGTATTTGTTGTGCACATGTCACCAAGTCTTGGCTCTAAACTTTTTACCTTAGCAAAACAAATTGGGATGATGAGTCAAGGCTATGTTTGGATAGCAACCGATAGTATGGCTAATTTATTCAATTCCTTGAGTTATAATGTGAGGGAATCAATGGAAGGAGTATTGGGTGTTAGGACTTATATTCCAAGAACAAAAAAACTAGAGGATTTTAGAGTTAGATGGAAAAGAAAATTTTTAAGTGATAATCCAACACTTGTTGACACAAATTTGAACATTTTTGGAATATGGGCTTATGATGCTACAATTGCATTAGCAATGGCTATTGAGGAAGTTGGAATTGGAGCCACTAAATTTGGTTACAATGAGAGTAACACATCAAGCAATTATTACATGCCTACTTTTGAAAATTTTGGTATTGCACAAAATGGTGAGAAATTGGGTCAAGCTTTGTTAAACACTAGATTTAATGGTCTTAGTGGTGATTTCAATGTTGTTGGTGGGAAGTTACAAGCATCAATATATGAAATAATTAATGTGATTGGTGATGGGGAAAAAAGGGTTGGATTTTGGACACCACATGAAGGGTTTGTTAGAAATTTGGACACAAAAGGCATAATAAGAAGCAATAATAGCATATACTCTACTTCTAAAAATGATCTTGGGGTAATCATGTGGCCAGGGGATATGAACTCTATTCCAAAGGGATGGGAAATTCCTACTATTGGGAAGAAGTTGAGGATAGGAGTACCAGTGAAAAATGGAGATAACTACACTGAATTTTTGCATATAAGTACTAATTCAACACTAGCCACTGGCTTCTGCATTGATGTCTTCAAAGCTGTGGTGGAAATTTTGCCTTATGCATTACCATATGAGTTTGTTCCATTTGCAAAGCCTGATGGTGAGATGGCGGGAACCTACAATGATTTGATCACTCAACTTTATTATGGGGTAATCTTTTTTCTCATATCAAGAACCCTGATCTTATATATGTGAATGATTTAATTTACATCATGAAACATTGCCAAATTCTTAGTATACTTTTAATATATGAAATATGTGAACTTTATGGTTTCTTTATTGGATAAATAATCAAATTAATGCATGAAATTGTAAGAAATGGTCAAAATAGTCCCTACTCTTTGAGAGTTTAAAAACACATCCATTAAATAATAAAATGTCATTTAAAATAATCATGCGTTAATTTTTGTTGTTAAAGACCGATGTGAGTGGCAACTGATTTGCCTATGGATTTTAGGTCTCCTAATGACTACTTTGTCAGTAATTAGTCTTTGAACAATTGAAATTACTAACAAATTGTTTTTGAAATAACCTAAAAATCATAGGCTAACTAACTAGTCCATGGTGATTTTGGATCAGAACTTTGATGCGGTGGTGGGGGATGTAACAATCATTGCAAACAGATCCGACTATGTTGATTTCACAATGCCATACACAGAATCTGGTGTGACAATGGTTGTTATAATGAAAGACAACAGAAAGAAAAATGCATGGGCCTTTTTGAAGCCACTCACATGGGATCTTTGGGTAACAACAGCTTGTTCATTTGTATTCATTGGATTTGTTGTTTGGGTCCTTGAACATAGAATAAACAACGATTTCAGAGGACCAACCTCTCATCAGATTGGCACAAGCTTATGGTTTTCCTTTTCAACTATGGTCTTTGCTCAAAGTAAGTCTCACTCATCAAACACACACATTCATACAGTAAGCACATCAATGATTATCAGATCAAGATCAAACAATTCAGCTTTCAAACTCAGTATTTTAGAGTTAAAAAATATCAAAATTTACTTACTTTCTATATTGTACAATCTCGTTCCAAAAATTGCGGATTACTTGAATTTTTTGCTACATACAATCTAAATCCATAAGTGTTCATGTATAAGTTATTCTATCACAAATTAGGAAAGATTTAGGCATTGATGAGTTGGATCCAAATATGGTTTGTGATAAACTTTATGACGTAATTTGATCCATGCAGTTGATCCCACTTAGTAGTGGGATAAACTTTTTTCATATAAGTTAGAAGCTGTTTTCAAAAGCTATCATGGAGTGCTTATAGAAATCTAGAGAAAATAGGTTATGGACATGTCATATGTTGTTTGCATGCTCTCTTAAAAAGTATCACAAGTATTTACATCGGTAGATAAGTTCGAATAAGTCAATTCAAATACGCTCTCACGGTTAACCATCACATTTTAATCACAGGAGAGAGAGTAGTGAGTAACTTGGCAAGATTTGTGGTGGTTATATGGGTTTTTGTGGTTCTAATTTTGGTTCAAAGTTACACTGCAAGCTTGACTTCACTCTTAACAGTTGAACAACTAAAGCCAGCTATTACAGACGTTAACCAACTTCTAAAGAATAAGATGAATGTTGGCTATCTGGAAGGTTCTTTTGTTTATGGAATCTTGAAGGAAATGAATTTCCAAGAATCTCAGCTCATTACTTATCAATCACCTGAAGAATGTAATGAGCTTTTCATAAAAGGAAGTGCAAATGGTGGTATTGATGCTGCTTTTGATGAAGTTCCCTATGTTAAGCAATTTCTTGGAATTTATAGTTGTTCTTCTTCAAAGTATGTCATGGTTGAGCCAAGATTTAAAACGGGTGGTTTTGGCTATGTAAGTTTTGTTAACTCTCTCTCTCTCATCTATCTCCCTAATATAATGTCATCATAATTTTCTCTTGTGAGCAACATTCCAAAATTCAAACCTAACATACTGATTCAATGAGTTGAATTGGTTTGATCCCAATCAATTGCAGTCTGGTTGAATTGAATTGGTTCAACTATTATTGGTTCAAACGATTCATGTTTTTATATTTTAATTTATTTCTTTTTAAAATTTGAATACTATTTTACTTGTTTATTTATTTCTCATTTGGTTCACTTGTGATTGAACCAATTGAACTATAACCTAGAAGTCGCATTGGTTTGATTCACGATCGGGTTTGTAAAACATTGCTTGTGAGTACTAACTTGACTTTTGTGGGGGTGAATTTGTAGGCATTCCCAAAAGGTTCACCTCTGGTAGCAGACATTTCAAGGGCAATCCTAAATGTGACTCAAGGAGGCAAAATGAGAACAATTGAGAATGCATGGTTCAAAGAAAGTCGTTGTCTAGATTCCAATACAGAAATTTCCTCTAATAATAGTCTTGGCCTTGAAAGCTTCTGGGGTCTTTTTCTCATAGCAGGGATTGCTTCCCTATTAGCACTCCTAATCTTTGTGGTAACGTTTCTACATCAGCACAAACACATTTGGTTAAACAATAATCCAAGTAATTCAATATGGAGACGAATTGAAGTCATGGTTAGGATGTTTGATCAAAGAGACTTGAGCAGTCACACATTCAAGAAAACAGAAAATATAAATGGAAGTAGTAATAGTCCTTATCATGATGATGATTTAGGTGCGGTAGAGGCCTCTCCAGGTACACCTTATCCACCTAGTCCATTTAGTCAAACTGAATCAAATGTTTCCTTTTATGGAGATTTTAGTCAAAGCATAGAAATGGATGTCATGCAAATTACTAATCCAGAAGTTTCCCCTGTGAACAACTGTGAAATTAACTCCCAAGCAACACGAGATCATCTATAA
Protein sequence

>MS.gene014935.t1

MTTIPTRVFVVHMSPSLGSKLFTLAKQIGMMSQGYVWIATDSMANLFNSLSYNVRESMEGVLGVRTYIPRTKKLEDFRVRWKRKFLSDNPTLVDTNLNIFGIWAYDATIALAMAIEEVGIGATKFGYNESNTSSNYYMPTFENFGIAQNGEKLGQALLNTRFNGLSGDFNVVGGKLQASIYEIINVIGDGEKRVGFWTPHEGFVRNLDTKGIIRSNNSIYSTSKNDLGVIMWPGDMNSIPKGWEIPTIGKKLRIGVPVKNGDNYTEFLHISTNSTLATGFCIDVFKAVVEILPYALPYEFVPFAKPDGEMAGTYNDLITQLYYGNFDAVVGDVTIIANRSDYVDFTMPYTESGVTMVVIMKDNRKKNAWAFLKPLTWDLWVTTACSFVFIGFVVWVLEHRINNDFRGPTSHQIGTSLWFSFSTMVFAQRERVVSNLARFVVVIWVFVVLILVQSYTASLTSLLTVEQLKPAITDVNQLLKNKMNVGYLEGSFVYGILKEMNFQESQLITYQSPEECNELFIKGSANGGIDAAFDEVPYVKQFLGIYSCSSSKYVMVEPRFKTGGFGYAFPKGSPLVADISRAILNVTQGGKMRTIENAWFKESRCLDSNTEISSNNSLGLESFWGLFLIAGIASLLALLIFVVTFLHQHKHIWLNNNPSNSIWRRIEVMVRMFDQRDLSSHTFKKTENINGSSNSPYHDDDLGAVEASPGTPYPPSPFSQTESNVSFYGDFSQSIEMDVMQITNPEVSPVNNCEINSQATRDHL