Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42668.t1 | KEH35890.1 | 95 | 540 | 27 | 0 | 1 | 540 | 141 | 680 | 4.50E-301 | 1043.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42668.t1 | O81078 | 52.3 | 541 | 229 | 9 | 1 | 540 | 241 | 753 | 5.3e-157 | 555.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42668.t1 | A0A072VCN2 | 95.0 | 540 | 27 | 0 | 1 | 540 | 141 | 680 | 3.3e-301 | 1043.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene42668 | 0.832061 | 1.17E-55 | -1.69E-46 |
| MS.gene049151 | MS.gene42668 | 0.831675 | 1.46E-55 | -1.69E-46 |
| MS.gene049153 | MS.gene42668 | 0.832359 | 9.89E-56 | -1.69E-46 |
| MS.gene049230 | MS.gene42668 | 0.823101 | 1.66E-53 | -1.69E-46 |
| MS.gene049297 | MS.gene42668 | 0.807909 | 4.02E-50 | -1.69E-46 |
| MS.gene049378 | MS.gene42668 | 0.852267 | 5.16E-61 | -1.69E-46 |
| MS.gene049758 | MS.gene42668 | 0.817357 | 3.44E-52 | -1.69E-46 |
| MS.gene049910 | MS.gene42668 | 0.825362 | 4.89E-54 | -1.69E-46 |
| MS.gene049993 | MS.gene42668 | 0.802288 | 6.02E-49 | -1.69E-46 |
| MS.gene050168 | MS.gene42668 | 0.835116 | 2.02E-56 | -1.69E-46 |
| MS.gene050226 | MS.gene42668 | 0.857509 | 1.56E-62 | -1.69E-46 |
| MS.gene050227 | MS.gene42668 | 0.859269 | 4.65E-63 | -1.69E-46 |
| MS.gene050228 | MS.gene42668 | 0.860787 | 1.62E-63 | -1.69E-46 |
| MS.gene050398 | MS.gene42668 | 0.820305 | 7.36E-53 | -1.69E-46 |
| MS.gene050406 | MS.gene42668 | 0.811659 | 6.27E-51 | -1.69E-46 |
| MS.gene050426 | MS.gene42668 | -0.830928 | 2.23E-55 | -1.69E-46 |
| MS.gene050623 | MS.gene42668 | -0.859822 | 3.17E-63 | -1.69E-46 |
| MS.gene050642 | MS.gene42668 | 0.881621 | 2.06E-70 | -1.69E-46 |
| MS.gene050820 | MS.gene42668 | 0.81338 | 2.64E-51 | -1.69E-46 |
| MS.gene051373 | MS.gene42668 | 0.826232 | 3.04E-54 | -1.69E-46 |
| MS.gene051535 | MS.gene42668 | 0.8226 | 2.17E-53 | -1.69E-46 |
| MS.gene051663 | MS.gene42668 | 0.802842 | 4.63E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene42668 | 0.845415 | 4.12E-59 | -1.69E-46 |
| MS.gene051983 | MS.gene42668 | 0.898823 | 3.63E-77 | -1.69E-46 |
| MS.gene052011 | MS.gene42668 | -0.815104 | 1.10E-51 | -1.69E-46 |
| MS.gene052077 | MS.gene42668 | 0.871838 | 5.04E-67 | -1.69E-46 |
| MS.gene052176 | MS.gene42668 | 0.823543 | 1.31E-53 | -1.69E-46 |
| MS.gene052188 | MS.gene42668 | 0.814062 | 1.87E-51 | -1.69E-46 |
| MS.gene052253 | MS.gene42668 | 0.821385 | 4.15E-53 | -1.69E-46 |
| MS.gene052255 | MS.gene42668 | 0.821339 | 4.25E-53 | -1.69E-46 |
| MS.gene052340 | MS.gene42668 | 0.845082 | 5.07E-59 | -1.69E-46 |
| MS.gene052389 | MS.gene42668 | 0.809139 | 2.19E-50 | -1.69E-46 |
| MS.gene052600 | MS.gene42668 | 0.811565 | 6.57E-51 | -1.69E-46 |
| MS.gene053073 | MS.gene42668 | 0.801463 | 8.90E-49 | -1.69E-46 |
| MS.gene05316 | MS.gene42668 | 0.811485 | 6.84E-51 | -1.69E-46 |
| MS.gene053494 | MS.gene42668 | 0.84453 | 7.14E-59 | -1.69E-46 |
| MS.gene053557 | MS.gene42668 | 0.807159 | 5.79E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene42668 | 0.856576 | 2.93E-62 | -1.69E-46 |
| MS.gene053928 | MS.gene42668 | 0.80592 | 1.06E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene42668 | 0.833204 | 6.10E-56 | -1.69E-46 |
| MS.gene054349 | MS.gene42668 | 0.844775 | 6.13E-59 | -1.69E-46 |
| MS.gene054930 | MS.gene42668 | 0.857145 | 1.99E-62 | -1.69E-46 |
| MS.gene054942 | MS.gene42668 | 0.809867 | 1.53E-50 | -1.69E-46 |
| MS.gene054983 | MS.gene42668 | 0.823566 | 1.29E-53 | -1.69E-46 |
| MS.gene05510 | MS.gene42668 | 0.811153 | 8.07E-51 | -1.69E-46 |
| MS.gene055367 | MS.gene42668 | 0.819548 | 1.10E-52 | -1.69E-46 |
| MS.gene05553 | MS.gene42668 | 0.848055 | 7.82E-60 | -1.69E-46 |
| MS.gene055701 | MS.gene42668 | 0.853425 | 2.41E-61 | -1.69E-46 |
| MS.gene056659 | MS.gene42668 | 0.809243 | 2.08E-50 | -1.69E-46 |
| MS.gene056723 | MS.gene42668 | 0.83568 | 1.46E-56 | -1.69E-46 |
| MS.gene056899 | MS.gene42668 | -0.810564 | 1.08E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene42668 | 0.889849 | 1.68E-73 | -1.69E-46 |
| MS.gene05702 | MS.gene42668 | 0.80598 | 1.03E-49 | -1.69E-46 |
| MS.gene057121 | MS.gene42668 | 0.803693 | 3.09E-49 | -1.69E-46 |
| MS.gene057396 | MS.gene42668 | 0.853878 | 1.79E-61 | -1.69E-46 |
| MS.gene057639 | MS.gene42668 | 0.81987 | 9.26E-53 | -1.69E-46 |
| MS.gene057750 | MS.gene42668 | 0.824155 | 9.41E-54 | -1.69E-46 |
| MS.gene057754 | MS.gene42668 | 0.816587 | 5.12E-52 | -1.69E-46 |
| MS.gene058002 | MS.gene42668 | 0.822605 | 2.17E-53 | -1.69E-46 |
| MS.gene05811 | MS.gene42668 | 0.805198 | 1.50E-49 | -1.69E-46 |
| MS.gene058139 | MS.gene42668 | 0.813665 | 2.28E-51 | -1.69E-46 |
| MS.gene058142 | MS.gene42668 | 0.863361 | 2.63E-64 | -1.69E-46 |
| MS.gene058435 | MS.gene42668 | 0.82971 | 4.42E-55 | -1.69E-46 |
| MS.gene058710 | MS.gene42668 | 0.818253 | 2.16E-52 | -1.69E-46 |
| MS.gene058749 | MS.gene42668 | 0.807856 | 4.12E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene42668 | 0.821379 | 4.17E-53 | -1.69E-46 |
| MS.gene059247 | MS.gene42668 | 0.832252 | 1.05E-55 | -1.69E-46 |
| MS.gene059285 | MS.gene42668 | 0.857116 | 2.03E-62 | -1.69E-46 |
| MS.gene059420 | MS.gene42668 | 0.804009 | 2.65E-49 | -1.69E-46 |
| MS.gene059511 | MS.gene42668 | 0.801205 | 1.00E-48 | -1.69E-46 |
| MS.gene059597 | MS.gene42668 | 0.803517 | 3.36E-49 | -1.69E-46 |
| MS.gene059609 | MS.gene42668 | 0.802328 | 5.91E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene42668 | 0.83865 | 2.54E-57 | -1.69E-46 |
| MS.gene059894 | MS.gene42668 | 0.834837 | 2.38E-56 | -1.69E-46 |
| MS.gene059899 | MS.gene42668 | 0.805599 | 1.24E-49 | -1.69E-46 |
| MS.gene060683 | MS.gene42668 | 0.827517 | 1.50E-54 | -1.69E-46 |
| MS.gene060685 | MS.gene42668 | 0.808988 | 2.36E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene42668 | 0.844771 | 6.15E-59 | -1.69E-46 |
| MS.gene061114 | MS.gene42668 | -0.828104 | 1.08E-54 | -1.69E-46 |
| MS.gene061159 | MS.gene42668 | 0.825655 | 4.17E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene42668 | MS.gene037906 | PPI |
| MS.gene42668 | MS.gene43349 | PPI |
| MS.gene42668 | MS.gene02681 | PPI |
| MS.gene32730 | MS.gene42668 | PPI |
| MS.gene42668 | MS.gene41327 | PPI |
| MS.gene42668 | MS.gene53723 | PPI |
| MS.gene42668 | MS.gene80157 | PPI |
| MS.gene02681 | MS.gene42668 | PPI |
| MS.gene42668 | MS.gene014935 | PPI |
| MS.gene42668 | MS.gene80159 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42668.t1 | MTR_3g105595 | 94.824 | 541 | 28 | 0 | 1 | 541 | 141 | 681 | 0.0 | 1028 |
| MS.gene42668.t1 | MTR_3g105610 | 89.299 | 542 | 56 | 1 | 1 | 540 | 256 | 797 | 0.0 | 974 |
| MS.gene42668.t1 | MTR_8g073210 | 40.951 | 547 | 302 | 14 | 1 | 540 | 248 | 780 | 3.13e-116 | 366 |
| MS.gene42668.t1 | MTR_3g115910 | 38.113 | 551 | 310 | 14 | 1 | 542 | 247 | 775 | 1.11e-113 | 355 |
| MS.gene42668.t1 | MTR_3g115910 | 37.887 | 549 | 310 | 14 | 1 | 540 | 247 | 773 | 2.64e-111 | 353 |
| MS.gene42668.t1 | MTR_3g115910 | 37.887 | 549 | 310 | 14 | 1 | 540 | 292 | 818 | 5.32e-111 | 353 |
| MS.gene42668.t1 | MTR_5g024350 | 37.184 | 554 | 313 | 14 | 1 | 540 | 247 | 779 | 7.44e-111 | 352 |
| MS.gene42668.t1 | MTR_5g024350 | 37.184 | 554 | 313 | 14 | 1 | 540 | 279 | 811 | 9.72e-111 | 353 |
| MS.gene42668.t1 | MTR_2g088450 | 36.861 | 548 | 320 | 14 | 1 | 540 | 154 | 683 | 5.92e-105 | 334 |
| MS.gene42668.t1 | MTR_8g073490 | 37.030 | 559 | 311 | 17 | 1 | 541 | 247 | 782 | 1.17e-104 | 336 |
| MS.gene42668.t1 | MTR_2g088450 | 36.861 | 548 | 320 | 14 | 1 | 540 | 187 | 716 | 1.19e-104 | 334 |
| MS.gene42668.t1 | MTR_2g088450 | 36.861 | 548 | 320 | 14 | 1 | 540 | 252 | 781 | 3.18e-104 | 334 |
| MS.gene42668.t1 | MTR_4g087925 | 36.029 | 544 | 297 | 13 | 1 | 541 | 266 | 761 | 1.28e-100 | 325 |
| MS.gene42668.t1 | MTR_2g015270 | 35.229 | 545 | 299 | 13 | 1 | 541 | 263 | 757 | 6.51e-97 | 317 |
| MS.gene42668.t1 | MTR_2g088430 | 35.660 | 530 | 312 | 14 | 1 | 519 | 245 | 756 | 1.16e-95 | 311 |
| MS.gene42668.t1 | MTR_5g059920 | 34.559 | 544 | 307 | 12 | 1 | 541 | 264 | 761 | 2.73e-95 | 307 |
| MS.gene42668.t1 | MTR_5g059920 | 34.926 | 544 | 305 | 13 | 1 | 541 | 264 | 761 | 4.22e-94 | 307 |
| MS.gene42668.t1 | MTR_2g088450 | 38.612 | 461 | 259 | 12 | 1 | 454 | 252 | 695 | 8.28e-93 | 299 |
| MS.gene42668.t1 | MTR_5g059900 | 34.559 | 544 | 307 | 12 | 1 | 541 | 170 | 667 | 1.09e-91 | 297 |
| MS.gene42668.t1 | MTR_2g015260 | 32.477 | 545 | 306 | 12 | 1 | 541 | 72 | 558 | 3.32e-89 | 289 |
| MS.gene42668.t1 | MTR_0018s0240 | 32.044 | 543 | 303 | 10 | 1 | 541 | 191 | 669 | 5.25e-87 | 286 |
| MS.gene42668.t1 | MTR_0018s0230 | 30.657 | 548 | 303 | 12 | 1 | 541 | 169 | 646 | 2.88e-82 | 270 |
| MS.gene42668.t1 | MTR_0018s0230 | 30.657 | 548 | 303 | 12 | 1 | 541 | 169 | 646 | 3.45e-81 | 270 |
| MS.gene42668.t1 | MTR_8g073210 | 39.173 | 411 | 232 | 12 | 1 | 405 | 248 | 646 | 4.62e-79 | 261 |
| MS.gene42668.t1 | MTR_3g115910 | 36.908 | 401 | 225 | 11 | 1 | 393 | 247 | 627 | 2.25e-75 | 252 |
| MS.gene42668.t1 | MTR_3g115910 | 36.908 | 401 | 225 | 11 | 1 | 393 | 292 | 672 | 3.40e-75 | 252 |
| MS.gene42668.t1 | MTR_2g088450 | 36.341 | 410 | 237 | 12 | 1 | 403 | 154 | 546 | 5.99e-73 | 243 |
| MS.gene42668.t1 | MTR_8g073210 | 38.346 | 399 | 228 | 12 | 1 | 393 | 248 | 634 | 1.07e-72 | 244 |
| MS.gene42668.t1 | MTR_2g015310 | 29.476 | 553 | 303 | 16 | 1 | 541 | 261 | 738 | 1.15e-72 | 249 |
| MS.gene42668.t1 | MTR_2g088450 | 36.341 | 410 | 237 | 12 | 1 | 403 | 252 | 644 | 4.43e-72 | 243 |
| MS.gene42668.t1 | MTR_2g015290 | 30.601 | 549 | 307 | 18 | 1 | 541 | 259 | 741 | 4.46e-71 | 245 |
| MS.gene42668.t1 | MTR_6g045087 | 38.957 | 326 | 189 | 5 | 222 | 540 | 39 | 361 | 5.98e-71 | 235 |
| MS.gene42668.t1 | MTR_2g088450 | 35.714 | 406 | 237 | 12 | 1 | 399 | 154 | 542 | 1.09e-68 | 231 |
| MS.gene42668.t1 | MTR_2g015280 | 29.872 | 549 | 305 | 16 | 1 | 541 | 258 | 734 | 1.31e-68 | 238 |
| MS.gene42668.t1 | MTR_5g060330 | 34.295 | 312 | 167 | 9 | 1 | 310 | 170 | 445 | 6.30e-43 | 162 |
| MS.gene42668.t1 | MTR_8g073210 | 33.443 | 305 | 186 | 11 | 1 | 299 | 248 | 541 | 2.25e-34 | 137 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42668.t1 | AT2G29120 | 51.287 | 544 | 233 | 10 | 1 | 541 | 253 | 767 | 0.0 | 558 |
| MS.gene42668.t1 | AT2G24720 | 50.832 | 541 | 249 | 6 | 1 | 541 | 246 | 769 | 0.0 | 553 |
| MS.gene42668.t1 | AT2G29100 | 52.214 | 542 | 230 | 9 | 1 | 541 | 243 | 756 | 2.82e-180 | 533 |
| MS.gene42668.t1 | AT2G29100 | 52.214 | 542 | 230 | 9 | 1 | 541 | 241 | 754 | 2.94e-180 | 532 |
| MS.gene42668.t1 | AT2G29110 | 52.768 | 542 | 232 | 9 | 1 | 541 | 244 | 762 | 1.55e-179 | 531 |
| MS.gene42668.t1 | AT2G24710 | 48.524 | 542 | 263 | 6 | 1 | 542 | 269 | 794 | 1.61e-179 | 526 |
| MS.gene42668.t1 | AT2G29110 | 52.768 | 542 | 232 | 9 | 1 | 541 | 245 | 763 | 1.66e-179 | 531 |
| MS.gene42668.t1 | AT2G24710 | 48.429 | 541 | 263 | 6 | 1 | 541 | 245 | 769 | 5.92e-178 | 525 |
| MS.gene42668.t1 | AT2G24710 | 48.429 | 541 | 263 | 6 | 1 | 541 | 269 | 793 | 6.60e-178 | 526 |
| MS.gene42668.t1 | AT5G27100 | 48.155 | 542 | 255 | 8 | 1 | 541 | 246 | 762 | 5.20e-176 | 520 |
| MS.gene42668.t1 | AT5G11210 | 45.488 | 543 | 277 | 5 | 1 | 542 | 177 | 701 | 3.10e-171 | 502 |
| MS.gene42668.t1 | AT5G11210 | 45.488 | 543 | 277 | 5 | 1 | 542 | 169 | 693 | 3.21e-171 | 502 |
| MS.gene42668.t1 | AT5G11210 | 45.488 | 543 | 277 | 5 | 1 | 542 | 169 | 693 | 3.21e-171 | 502 |
| MS.gene42668.t1 | AT5G11210 | 45.488 | 543 | 277 | 5 | 1 | 542 | 169 | 693 | 3.28e-171 | 502 |
| MS.gene42668.t1 | AT5G11210 | 45.488 | 543 | 277 | 5 | 1 | 542 | 251 | 775 | 1.20e-170 | 503 |
| MS.gene42668.t1 | AT5G11210 | 45.488 | 543 | 277 | 5 | 1 | 542 | 251 | 775 | 2.09e-170 | 503 |
| MS.gene42668.t1 | AT5G11210 | 45.488 | 543 | 277 | 5 | 1 | 542 | 251 | 775 | 2.09e-170 | 503 |
| MS.gene42668.t1 | AT5G11210 | 45.287 | 541 | 277 | 5 | 1 | 540 | 169 | 691 | 8.70e-169 | 499 |
| MS.gene42668.t1 | AT5G11210 | 45.287 | 541 | 277 | 5 | 1 | 540 | 193 | 715 | 1.18e-168 | 500 |
| MS.gene42668.t1 | AT5G11210 | 45.287 | 541 | 277 | 5 | 1 | 540 | 251 | 773 | 5.84e-168 | 500 |
| MS.gene42668.t1 | AT5G11180 | 44.834 | 542 | 283 | 6 | 1 | 540 | 250 | 777 | 1.36e-164 | 493 |
| MS.gene42668.t1 | AT4G31710 | 46.950 | 541 | 255 | 7 | 1 | 541 | 246 | 754 | 1.33e-161 | 483 |
| MS.gene42668.t1 | AT4G31710 | 45.841 | 541 | 254 | 7 | 1 | 541 | 269 | 770 | 1.75e-156 | 470 |
| MS.gene42668.t1 | AT5G11180 | 39.411 | 543 | 252 | 9 | 1 | 541 | 250 | 717 | 7.58e-129 | 399 |
| MS.gene42668.t1 | AT1G42540 | 36.794 | 549 | 321 | 13 | 1 | 541 | 245 | 775 | 3.60e-110 | 350 |
| MS.gene42668.t1 | AT1G42540 | 36.794 | 549 | 321 | 13 | 1 | 541 | 245 | 775 | 3.60e-110 | 350 |
| MS.gene42668.t1 | AT1G42540 | 36.794 | 549 | 321 | 13 | 1 | 541 | 245 | 775 | 3.60e-110 | 350 |
| MS.gene42668.t1 | AT2G17260 | 38.940 | 547 | 305 | 19 | 1 | 540 | 251 | 775 | 1.78e-107 | 343 |
| MS.gene42668.t1 | AT5G48400 | 37.590 | 556 | 273 | 18 | 1 | 547 | 253 | 743 | 7.76e-107 | 337 |
| MS.gene42668.t1 | AT4G35290 | 37.500 | 552 | 312 | 17 | 1 | 543 | 247 | 774 | 1.13e-106 | 337 |
| MS.gene42668.t1 | AT5G48410 | 38.225 | 552 | 270 | 16 | 1 | 547 | 255 | 740 | 1.64e-106 | 336 |
| MS.gene42668.t1 | AT5G48400 | 37.455 | 550 | 271 | 17 | 1 | 541 | 253 | 738 | 9.39e-105 | 334 |
| MS.gene42668.t1 | AT5G48410 | 38.095 | 546 | 268 | 15 | 1 | 541 | 255 | 735 | 1.39e-104 | 334 |
| MS.gene42668.t1 | AT4G35290 | 37.341 | 549 | 311 | 17 | 1 | 540 | 247 | 771 | 3.47e-104 | 334 |
| MS.gene42668.t1 | AT4G35290 | 37.341 | 549 | 311 | 17 | 1 | 540 | 247 | 771 | 3.47e-104 | 334 |
| MS.gene42668.t1 | AT4G35290 | 37.341 | 549 | 311 | 17 | 1 | 540 | 247 | 771 | 3.47e-104 | 334 |
| MS.gene42668.t1 | AT4G35290 | 37.341 | 549 | 311 | 17 | 1 | 540 | 247 | 771 | 3.47e-104 | 334 |
| MS.gene42668.t1 | AT4G35290 | 37.341 | 549 | 311 | 17 | 1 | 540 | 247 | 771 | 3.47e-104 | 334 |
| MS.gene42668.t1 | AT1G05200 | 34.426 | 549 | 332 | 14 | 1 | 541 | 275 | 803 | 4.20e-102 | 327 |
| MS.gene42668.t1 | AT1G05200 | 34.426 | 549 | 332 | 14 | 1 | 541 | 275 | 803 | 4.20e-102 | 327 |
| MS.gene42668.t1 | AT3G51480 | 35.495 | 555 | 323 | 14 | 1 | 547 | 244 | 771 | 5.67e-102 | 325 |
| MS.gene42668.t1 | AT1G05200 | 34.307 | 548 | 332 | 14 | 1 | 540 | 275 | 802 | 1.85e-100 | 325 |
| MS.gene42668.t1 | AT1G05200 | 34.307 | 548 | 332 | 14 | 1 | 540 | 275 | 802 | 1.85e-100 | 325 |
| MS.gene42668.t1 | AT1G05200 | 34.307 | 548 | 332 | 14 | 1 | 540 | 275 | 802 | 1.85e-100 | 325 |
| MS.gene42668.t1 | AT3G51480 | 35.401 | 548 | 319 | 14 | 1 | 540 | 154 | 674 | 1.04e-99 | 320 |
| MS.gene42668.t1 | AT3G51480 | 35.401 | 548 | 319 | 14 | 1 | 540 | 244 | 764 | 6.21e-99 | 320 |
| MS.gene42668.t1 | AT3G51480 | 35.401 | 548 | 319 | 14 | 1 | 540 | 244 | 764 | 6.21e-99 | 320 |
| MS.gene42668.t1 | AT2G32390 | 36.496 | 548 | 328 | 14 | 1 | 541 | 160 | 694 | 8.63e-99 | 318 |
| MS.gene42668.t1 | AT2G32390 | 36.496 | 548 | 328 | 14 | 1 | 541 | 204 | 738 | 1.79e-98 | 318 |
| MS.gene42668.t1 | AT2G32390 | 36.496 | 548 | 328 | 14 | 1 | 541 | 262 | 796 | 6.72e-98 | 318 |
| MS.gene42668.t1 | AT2G32400 | 36.679 | 548 | 316 | 13 | 1 | 540 | 245 | 769 | 1.60e-97 | 317 |
| MS.gene42668.t1 | AT3G07520 | 37.226 | 548 | 274 | 17 | 1 | 540 | 260 | 745 | 1.87e-96 | 312 |
| MS.gene42668.t1 | AT5G48410 | 35.531 | 546 | 255 | 16 | 1 | 541 | 255 | 708 | 1.29e-88 | 291 |
| MS.gene42668.t1 | AT5G48410 | 35.165 | 546 | 253 | 16 | 1 | 541 | 255 | 704 | 1.99e-86 | 285 |
| MS.gene42668.t1 | AT5G11210 | 50.000 | 254 | 125 | 2 | 288 | 540 | 13 | 265 | 6.44e-83 | 265 |
| MS.gene42668.t1 | AT1G42540 | 36.098 | 410 | 239 | 10 | 1 | 403 | 245 | 638 | 9.52e-79 | 260 |
| MS.gene42668.t1 | AT2G32390 | 35.646 | 418 | 251 | 12 | 1 | 412 | 262 | 667 | 1.17e-76 | 255 |
| MS.gene42668.t1 | AT3G04110 | 30.309 | 551 | 302 | 16 | 1 | 551 | 244 | 712 | 2.88e-75 | 253 |
| MS.gene42668.t1 | AT3G04110 | 29.945 | 541 | 300 | 14 | 1 | 541 | 244 | 705 | 3.84e-74 | 251 |
| MS.gene42668.t1 | AT2G32390 | 34.699 | 415 | 253 | 12 | 1 | 409 | 262 | 664 | 2.14e-73 | 247 |
| MS.gene42668.t1 | AT2G32390 | 34.699 | 415 | 253 | 12 | 1 | 409 | 262 | 664 | 2.14e-73 | 247 |
| MS.gene42668.t1 | AT1G05200 | 33.253 | 415 | 251 | 12 | 1 | 408 | 275 | 670 | 1.12e-70 | 239 |
| MS.gene42668.t1 | AT2G32390 | 34.250 | 400 | 245 | 12 | 1 | 394 | 262 | 649 | 1.52e-67 | 231 |
| MS.gene42668.t1 | AT1G05200 | 32.668 | 401 | 244 | 12 | 1 | 394 | 275 | 656 | 5.97e-65 | 224 |
| MS.gene42668.t1 | AT3G04110 | 26.617 | 541 | 290 | 14 | 1 | 541 | 244 | 677 | 1.54e-56 | 202 |
Find 100 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGAAAAGAGAGTTGGATTT+TGG | 0.161309 | 3.3:-87024594 | MS.gene42668:CDS |
| ACTCTCATTGTAATCAAATT+TGG | 0.184403 | 3.3:+87024795 | None:intergenic |
| TGTTATTATTATTGCCTATT+AGG | 0.199649 | 3.3:+87024530 | None:intergenic |
| TTGTCAAACACTAGATTTAA+TGG | 0.214752 | 3.3:-87024694 | MS.gene42668:CDS |
| TTTCTAGATAGCCCTTTATT+TGG | 0.225965 | 3.3:+87024568 | None:intergenic |
| TAAAGGGCTATCTAGAAATT+TGG | 0.231236 | 3.3:-87024563 | MS.gene42668:CDS |
| CCCTATATTAAGCACTTTCT+TGG | 0.239631 | 3.3:-87022932 | MS.gene42668:CDS |
| TCATCTAGTTTCTTTGTTCT+AGG | 0.242984 | 3.3:+87024958 | None:intergenic |
| AGCCACTCACATGGGATCTT+TGG | 0.252189 | 3.3:-87023915 | MS.gene42668:CDS |
| TTTATAAAAGGAAGTGTAAA+TGG | 0.252930 | 3.3:-87022983 | MS.gene42668:CDS |
| AAGTTTGGTATTTCACAAAA+TGG | 0.258351 | 3.3:-87024736 | MS.gene42668:CDS |
| TGTTCATTGGATTTGTTGTT+TGG | 0.263168 | 3.3:-87023870 | MS.gene42668:CDS |
| GCATGTTCATTTGTGTTCAT+TGG | 0.291980 | 3.3:-87023883 | MS.gene42668:CDS |
| CAAGATTTGTGGTGGTTGTA+TGG | 0.309269 | 3.3:-87023231 | MS.gene42668:CDS |
| ATCAGATTGGCACAAGCTTA+TGG | 0.317813 | 3.3:-87023801 | MS.gene42668:CDS |
| AGATTTAAAACTGGTGGCTT+TGG | 0.326155 | 3.3:-87022872 | MS.gene42668:CDS |
| ATAGAATAAACAATGATTTC+AGG | 0.330201 | 3.3:-87023837 | MS.gene42668:CDS |
| TTGGACACAGAAGGCCTAAT+AGG | 0.347096 | 3.3:-87024544 | MS.gene42668:CDS |
| TCCAAGAAAGTGCTTAATAT+AGG | 0.347975 | 3.3:+87022931 | None:intergenic |
| TGGAAGGAGTGTTGGGTGTT+AGG | 0.354875 | 3.3:-87024990 | MS.gene42668:CDS |
| CCAAGAAAGTGCTTAATATA+GGG | 0.362025 | 3.3:+87022932 | None:intergenic |
| GCTATTGAGAAAGTTGGAAT+TGG | 0.368469 | 3.3:-87024823 | MS.gene42668:CDS |
| GCCACTCACATGGGATCTTT+GGG | 0.377419 | 3.3:-87023914 | MS.gene42668:CDS |
| GTTCATTGGATTTGTTGTTT+GGG | 0.383921 | 3.3:-87023869 | MS.gene42668:CDS |
| CCATGTGAGTGGCTTCAAAA+AGG | 0.389028 | 3.3:+87023924 | None:intergenic |
| CATTGTTTATTCTATGTTCA+AGG | 0.390884 | 3.3:+87023845 | None:intergenic |
| GGATGGGAAATTCCTACTAT+TGG | 0.394620 | 3.3:-87024439 | MS.gene42668:CDS |
| ACTAGATTTAATGGTCTTAG+TGG | 0.396942 | 3.3:-87024685 | MS.gene42668:CDS |
| TTGAGCGATCAACTCATTGT+AGG | 0.399010 | 3.3:+87024213 | None:intergenic |
| TGATGAGTCAAGGCTATGTT+TGG | 0.402077 | 3.3:-87025074 | MS.gene42668:CDS |
| GTAGGAATTTCCCATCCCTT+TGG | 0.420382 | 3.3:+87024445 | None:intergenic |
| CTACTATTGGCAAGAAATTG+AGG | 0.428442 | 3.3:-87024426 | MS.gene42668:CDS |
| GTTGAACCAAGATTTAAAAC+TGG | 0.428995 | 3.3:-87022881 | MS.gene42668:CDS |
| GCCAGTGGCTTGTGTTGAAT+TGG | 0.433601 | 3.3:+87024336 | None:intergenic |
| ATGATCTTGGGTCAATCATA+TGG | 0.436476 | 3.3:-87024489 | MS.gene42668:CDS |
| ACAATGCCATACACAGAATC+TGG | 0.438361 | 3.3:-87023997 | MS.gene42668:CDS |
| TCATCTTATTCTTTAGAAGT+TGG | 0.441150 | 3.3:+87023113 | None:intergenic |
| CTCAATTTCTTGCCAATAGT+AGG | 0.447370 | 3.3:+87024427 | None:intergenic |
| CAGAAATTTGATGCGGTAGT+GGG | 0.453072 | 3.3:-87024063 | MS.gene42668:CDS |
| AAGTCATATGGTAAGGCATA+AGG | 0.455526 | 3.3:+87024274 | None:intergenic |
| GCAAATCGAACAAAGTCATA+TGG | 0.457326 | 3.3:+87024262 | None:intergenic |
| AAATTTGTGTCAACAAGTGT+TGG | 0.461667 | 3.3:+87024895 | None:intergenic |
| ACAGAAATTTGATGCGGTAG+TGG | 0.468808 | 3.3:-87024064 | MS.gene42668:intron |
| GTTCCTGCCATCTCACCATC+AGG | 0.472388 | 3.3:+87024235 | None:intergenic |
| CTTGGGTCAATCATATGGCC+AGG | 0.478903 | 3.3:-87024484 | MS.gene42668:CDS |
| TAGAATAAACAATGATTTCA+GGG | 0.480077 | 3.3:-87023836 | MS.gene42668:CDS |
| AAGATTTGTGGTGGTTGTAT+GGG | 0.480530 | 3.3:-87023230 | MS.gene42668:CDS |
| GGAATCAATGGAAGGAGTGT+TGG | 0.481226 | 3.3:-87024998 | MS.gene42668:CDS |
| GTCACACCAGATTCTGTGTA+TGG | 0.482816 | 3.3:+87023991 | None:intergenic |
| GAATCAATGGAAGGAGTGTT+GGG | 0.489443 | 3.3:-87024997 | MS.gene42668:CDS |
| TATGAGATAATTAATGTGAT+TGG | 0.490156 | 3.3:-87024622 | MS.gene42668:CDS |
| TTGTTTCAATGAAAGACAAC+AGG | 0.492606 | 3.3:-87023963 | MS.gene42668:CDS |
| GCAATGGCTATTGAGAAAGT+TGG | 0.497583 | 3.3:-87024829 | MS.gene42668:CDS |
| GCTTGTGTTGAATTGGTACT+AGG | 0.497766 | 3.3:+87024343 | None:intergenic |
| TGATCGCTCAACTTTACGAC+GGG | 0.518428 | 3.3:-87024201 | MS.gene42668:CDS |
| GGTGATGGTGAAAAGAGAGT+TGG | 0.519922 | 3.3:-87024601 | MS.gene42668:CDS |
| GAGTAACTTGGCAAGATTTG+TGG | 0.524831 | 3.3:-87023242 | MS.gene42668:CDS |
| TGTACTCTATTCCAAAGGGA+TGG | 0.525388 | 3.3:-87024456 | MS.gene42668:CDS |
| TGGTGTACGTCTGTAATAGC+TGG | 0.533257 | 3.3:+87023133 | None:intergenic |
| TTGGATAGTAACCGATGGTA+TGG | 0.535162 | 3.3:-87025055 | MS.gene42668:CDS |
| TCGAACAAAGTCATATGGTA+AGG | 0.538162 | 3.3:+87024267 | None:intergenic |
| TCTTGACAGTTGAACAACTA+AGG | 0.538252 | 3.3:-87023156 | MS.gene42668:CDS |
| GGACCACTCTCTCATCAGAT+TGG | 0.543596 | 3.3:-87023814 | MS.gene42668:CDS |
| AGCATAGACCATAGTTGAGA+AGG | 0.554038 | 3.3:+87023774 | None:intergenic |
| GTACTCTATTCCAAAGGGAT+GGG | 0.554830 | 3.3:-87024455 | MS.gene42668:CDS |
| AGAAATTTGATGCGGTAGTG+GGG | 0.561352 | 3.3:-87024062 | MS.gene42668:CDS |
| GATATGTACTCTATTCCAAA+GGG | 0.562232 | 3.3:-87024460 | MS.gene42668:CDS |
| GAACCAAGATTTAAAACTGG+TGG | 0.563610 | 3.3:-87022878 | MS.gene42668:CDS |
| AAGCCTGATGGTGAGATGGC+AGG | 0.567308 | 3.3:-87024238 | MS.gene42668:CDS |
| CTAAAGAATAAGATGAATGT+CGG | 0.571534 | 3.3:-87023106 | MS.gene42668:CDS |
| TAGTTGTTCAAAGTATGTCA+TGG | 0.581001 | 3.3:-87022903 | MS.gene42668:CDS |
| AGAGAAAGTAGTGAGTAACT+TGG | 0.583063 | 3.3:-87023254 | MS.gene42668:CDS |
| TTGGGTCAATCATATGGCCA+GGG | 0.583817 | 3.3:-87024483 | MS.gene42668:CDS |
| GGAATAGAGTACATATCCCC+TGG | 0.583843 | 3.3:+87024466 | None:intergenic |
| ATAAAAGGAAGTGTAAATGG+TGG | 0.589834 | 3.3:-87022980 | MS.gene42668:CDS |
| ATGAATGTCGGCTATCTCAA+AGG | 0.594170 | 3.3:-87023094 | MS.gene42668:CDS |
| ATAATTAATGTGATTGGTGA+TGG | 0.594746 | 3.3:-87024616 | MS.gene42668:CDS |
| TGCTACAATTGCATTAGCAA+TGG | 0.595360 | 3.3:-87024845 | MS.gene42668:CDS |
| GTTCGATTTGCAAAGCCTGA+TGG | 0.595979 | 3.3:-87024250 | MS.gene42668:CDS |
| GAATAAATTAGCCATACCAT+CGG | 0.598751 | 3.3:+87025044 | None:intergenic |
| ACCAATTCAACACAAGCCAC+TGG | 0.599399 | 3.3:-87024337 | MS.gene42668:CDS |
| TCTAGAAATTTGGACACAGA+AGG | 0.605086 | 3.3:-87024553 | MS.gene42668:CDS |
| GATGTGAGGGAATCAATGGA+AGG | 0.606194 | 3.3:-87025006 | MS.gene42668:CDS |
| TGCAAAGCCTGATGGTGAGA+TGG | 0.606948 | 3.3:-87024242 | MS.gene42668:CDS |
| GGATATGTACTCTATTCCAA+AGG | 0.607721 | 3.3:-87024461 | MS.gene42668:CDS |
| ATTGGCAAGAAATTGAGGAT+AGG | 0.608269 | 3.3:-87024421 | MS.gene42668:CDS |
| GAAATTTGATGCGGTAGTGG+GGG | 0.623597 | 3.3:-87024061 | MS.gene42668:CDS |
| AAAATAGGGATGATGAGTCA+AGG | 0.626352 | 3.3:-87025084 | None:intergenic |
| CACAGAATCTGGTGTGACAA+TGG | 0.627498 | 3.3:-87023986 | MS.gene42668:CDS |
| TAACTTGGCAAGATTTGTGG+TGG | 0.641212 | 3.3:-87023239 | MS.gene42668:CDS |
| ACCCAAAGATCCCATGTGAG+TGG | 0.641569 | 3.3:+87023913 | None:intergenic |
| AGAATAAACAATGATTTCAG+GGG | 0.643917 | 3.3:-87023835 | MS.gene42668:CDS |
| GTGCCAATCTGATGAGAGAG+TGG | 0.645474 | 3.3:+87023811 | None:intergenic |
| GATATCAATGCAGAAGCCAG+TGG | 0.660734 | 3.3:+87024321 | None:intergenic |
| TATGTTTGGATAGTAACCGA+TGG | 0.661801 | 3.3:-87025060 | MS.gene42668:CDS |
| ATATAACAATCACTGCAAGT+AGG | 0.665993 | 3.3:-87024038 | MS.gene42668:CDS |
| TGGGTCAATCATATGGCCAG+GGG | 0.674510 | 3.3:-87024482 | MS.gene42668:CDS |
| TTGATCGCTCAACTTTACGA+CGG | 0.681279 | 3.3:-87024202 | MS.gene42668:CDS |
| GGATTGACAGAAATTTGATG+CGG | 0.685801 | 3.3:-87024070 | MS.gene42668:intron |
| GATCGCTCAACTTTACGACG+GGG | 0.742491 | 3.3:-87024200 | MS.gene42668:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGAATGAAAAAAATTATTT+TGG | - | chr3.3:87023816-87023835 | MS.gene42668:CDS | 10.0% |
| !!! | AATTAAGATTTTATTCATAT+AGG | - | chr3.3:87024207-87024226 | MS.gene42668:CDS | 10.0% |
| !!! | TAAATTAAATTTGTTCAAGT+TGG | - | chr3.3:87024399-87024418 | MS.gene42668:CDS | 15.0% |
| !!! | TTTTTTCATTCTTTTCATTT+TGG | + | chr3.3:87023809-87023828 | None:intergenic | 15.0% |
| !! | AGATATTATATGAAAAGAAG+AGG | + | chr3.3:87023736-87023755 | None:intergenic | 20.0% |
| !! | ATAGAATAAACAATGATTTC+AGG | - | chr3.3:87024070-87024089 | MS.gene42668:intron | 20.0% |
| !! | CATAACAGTTACATTATTAA+GGG | - | chr3.3:87024264-87024283 | MS.gene42668:CDS | 20.0% |
| !! | GAATCATTAACATATATAAC+AGG | + | chr3.3:87023762-87023781 | None:intergenic | 20.0% |
| !! | GTGTAAAAACTTTAAACTTT+CGG | + | chr3.3:87024233-87024252 | None:intergenic | 20.0% |
| !! | TAGAATAAACAATGATTTCA+GGG | - | chr3.3:87024071-87024090 | MS.gene42668:intron | 20.0% |
| !! | TATGAGATAATTAATGTGAT+TGG | - | chr3.3:87023285-87023304 | MS.gene42668:intron | 20.0% |
| !! | TCATAACAGTTACATTATTA+AGG | - | chr3.3:87024263-87024282 | MS.gene42668:CDS | 20.0% |
| !! | TGTTATTATTATTGCCTATT+AGG | + | chr3.3:87023380-87023399 | None:intergenic | 20.0% |
| !!! | ATACCAAACTTTTCAAAATT+AGG | + | chr3.3:87023162-87023181 | None:intergenic | 20.0% |
| !!! | ATTTGAACATTTTTGGAATA+TGG | - | chr3.3:87023031-87023050 | MS.gene42668:CDS | 20.0% |
| !!! | TAGTTAAATCCATTTTTAAC+TGG | + | chr3.3:87023516-87023535 | None:intergenic | 20.0% |
| !!! | TGTAATGAGCTTTTTATAAA+AGG | - | chr3.3:87024912-87024931 | MS.gene42668:CDS | 20.0% |
| !!! | TTGAACAAATTTAATTTACG+TGG | + | chr3.3:87024397-87024416 | None:intergenic | 20.0% |
| !!! | TTTATAAAAGGAAGTGTAAA+TGG | - | chr3.3:87024924-87024943 | MS.gene42668:CDS | 20.0% |
| !!! | TTTGAACATTTTTGGAATAT+GGG | - | chr3.3:87023032-87023051 | MS.gene42668:CDS | 20.0% |
| !!! | TTTTGTTTATGGAATTTTGA+AGG | - | chr3.3:87024839-87024858 | MS.gene42668:CDS | 20.0% |
| ! | AAACTACTTAATCATTGCAA+AGG | - | chr3.3:87024332-87024351 | MS.gene42668:CDS | 25.0% |
| ! | AACCTAGAAAATATACTTCA+AGG | - | chr3.3:87024517-87024536 | MS.gene42668:CDS | 25.0% |
| ! | AAGTTTGGTATTTCACAAAA+TGG | - | chr3.3:87023171-87023190 | MS.gene42668:CDS | 25.0% |
| ! | ACTCTCATTGTAATCAAATT+TGG | + | chr3.3:87023115-87023134 | None:intergenic | 25.0% |
| ! | AGAATAAACAATGATTTCAG+GGG | - | chr3.3:87024072-87024091 | MS.gene42668:intron | 25.0% |
| ! | ATAATTAATGTGATTGGTGA+TGG | - | chr3.3:87023291-87023310 | MS.gene42668:intron | 25.0% |
| ! | CATTGTTTATTCTATGTTCA+AGG | + | chr3.3:87024065-87024084 | None:intergenic | 25.0% |
| ! | CTAAAGAATAAGATGAATGT+CGG | - | chr3.3:87024801-87024820 | MS.gene42668:CDS | 25.0% |
| ! | TAACTGTTATGATTGAATGA+CGG | + | chr3.3:87024255-87024274 | None:intergenic | 25.0% |
| ! | TAATGCGTTTAAATATGCTT+TGG | + | chr3.3:87024591-87024610 | None:intergenic | 25.0% |
| ! | TTGTCAAACACTAGATTTAA+TGG | - | chr3.3:87023213-87023232 | MS.gene42668:CDS | 25.0% |
| !! | GACACAAATTTGAACATTTT+TGG | - | chr3.3:87023024-87023043 | MS.gene42668:CDS | 25.0% |
| !! | TCATCTTATTCTTTAGAAGT+TGG | + | chr3.3:87024797-87024816 | None:intergenic | 25.0% |
| !! | TTTTAGTCCTTACATAACAT+GGG | - | chr3.3:87024454-87024473 | MS.gene42668:CDS | 25.0% |
| !!! | AGCAAAAAGACATTTTTTAC+TGG | - | chr3.3:87024559-87024578 | MS.gene42668:CDS | 25.0% |
| !!! | ATGCCTAATTTTGAAAAGTT+TGG | - | chr3.3:87023156-87023175 | MS.gene42668:CDS | 25.0% |
| !!! | ATTTTAGTCCTTACATAACA+TGG | - | chr3.3:87024453-87024472 | MS.gene42668:CDS | 25.0% |
| !!! | CTAGTTCTAAAAATGATCTT+GGG | - | chr3.3:87023406-87023425 | MS.gene42668:intron | 25.0% |
| !!! | TAGATGATTTTAGAGTTAGA+TGG | - | chr3.3:87022965-87022984 | MS.gene42668:CDS | 25.0% |
| !!! | TAGTATCTCATTTTAATGAC+AGG | - | chr3.3:87024630-87024649 | MS.gene42668:CDS | 25.0% |
| !!! | TCTAGTTCTAAAAATGATCT+TGG | - | chr3.3:87023405-87023424 | MS.gene42668:intron | 25.0% |
| AAATTTGTGTCAACAAGTGT+TGG | + | chr3.3:87023015-87023034 | None:intergenic | 30.0% | |
| ATAGGAGTTCCAGTTAAAAA+TGG | - | chr3.3:87023504-87023523 | MS.gene42668:intron | 30.0% | |
| ATATAACAATCACTGCAAGT+AGG | - | chr3.3:87023869-87023888 | MS.gene42668:CDS | 30.0% | |
| CGTTTAAATATGCTTTGGTT+TGG | + | chr3.3:87024586-87024605 | None:intergenic | 30.0% | |
| GAATAAATTAGCCATACCAT+CGG | + | chr3.3:87022866-87022885 | None:intergenic | 30.0% | |
| GATATGTACTCTATTCCAAA+GGG | - | chr3.3:87023447-87023466 | MS.gene42668:intron | 30.0% | |
| TAAAGGGCTATCTAGAAATT+TGG | - | chr3.3:87023344-87023363 | MS.gene42668:intron | 30.0% | |
| TACTTCAAGGACTAAACATA+AGG | - | chr3.3:87024530-87024549 | MS.gene42668:CDS | 30.0% | |
| TAGTTGTTCAAAGTATGTCA+TGG | - | chr3.3:87025004-87025023 | MS.gene42668:CDS | 30.0% | |
| TTGTTTCAATGAAAGACAAC+AGG | - | chr3.3:87023944-87023963 | MS.gene42668:CDS | 30.0% | |
| TTTCTAGATAGCCCTTTATT+TGG | + | chr3.3:87023342-87023361 | None:intergenic | 30.0% | |
| ! | ACTAGATTTAATGGTCTTAG+TGG | - | chr3.3:87023222-87023241 | MS.gene42668:CDS | 30.0% |
| ! | ATAAAAGGAAGTGTAAATGG+TGG | - | chr3.3:87024927-87024946 | MS.gene42668:CDS | 30.0% |
| ! | GATTTTGGACACCAAATAAA+GGG | - | chr3.3:87023328-87023347 | MS.gene42668:intron | 30.0% |
| ! | GTCCTTGAAGTATATTTTCT+AGG | + | chr3.3:87024522-87024541 | None:intergenic | 30.0% |
| ! | GTTGAACCAAGATTTAAAAC+TGG | - | chr3.3:87025026-87025045 | MS.gene42668:CDS | 30.0% |
| ! | TCATCTAGTTTCTTTGTTCT+AGG | + | chr3.3:87022952-87022971 | None:intergenic | 30.0% |
| ! | TTTTAGTCCCATGTTATGTA+AGG | + | chr3.3:87024464-87024483 | None:intergenic | 30.0% |
| !! | ATTCATTGAGTTTTGATGTG+AGG | - | chr3.3:87022887-87022906 | MS.gene42668:CDS | 30.0% |
| !! | CCAAGAAAGTGCTTAATATA+GGG | + | chr3.3:87024978-87024997 | None:intergenic | 30.0% |
| !! | CTCAAAGGTTCTTTTGTTTA+TGG | - | chr3.3:87024828-87024847 | MS.gene42668:CDS | 30.0% |
| !! | GTTCATTGGATTTGTTGTTT+GGG | - | chr3.3:87024038-87024057 | MS.gene42668:CDS | 30.0% |
| !! | TATGGAATTTTGAAGGACTT+GGG | - | chr3.3:87024846-87024865 | MS.gene42668:CDS | 30.0% |
| !! | TCCAAGAAAGTGCTTAATAT+AGG | + | chr3.3:87024979-87024998 | None:intergenic | 30.0% |
| !! | TGTTCATTGGATTTGTTGTT+TGG | - | chr3.3:87024037-87024056 | MS.gene42668:CDS | 30.0% |
| !! | TTATGGAATTTTGAAGGACT+TGG | - | chr3.3:87024845-87024864 | MS.gene42668:CDS | 30.0% |
| !! | TTCATTGAGTTTTGATGTGA+GGG | - | chr3.3:87022888-87022907 | MS.gene42668:CDS | 30.0% |
| AAGATTTGTGGTGGTTGTAT+GGG | - | chr3.3:87024677-87024696 | MS.gene42668:CDS | 35.0% | |
| AAGTCATATGGTAAGGCATA+AGG | + | chr3.3:87023636-87023655 | None:intergenic | 35.0% | |
| ACAACAGGAAGAAAAATGCA+TGG | - | chr3.3:87023959-87023978 | MS.gene42668:CDS | 35.0% | |
| AGAGAAAGTAGTGAGTAACT+TGG | - | chr3.3:87024653-87024672 | MS.gene42668:CDS | 35.0% | |
| ATGATCTTGGGTCAATCATA+TGG | - | chr3.3:87023418-87023437 | MS.gene42668:intron | 35.0% | |
| ATTGGCAAGAAATTGAGGAT+AGG | - | chr3.3:87023486-87023505 | MS.gene42668:intron | 35.0% | |
| CAACAGGAAGAAAAATGCAT+GGG | - | chr3.3:87023960-87023979 | MS.gene42668:CDS | 35.0% | |
| CCCTATATTAAGCACTTTCT+TGG | - | chr3.3:87024975-87024994 | MS.gene42668:CDS | 35.0% | |
| CGAATGTTCTACATACTACA+TGG | - | chr3.3:87024485-87024504 | MS.gene42668:CDS | 35.0% | |
| CTACTATTGGCAAGAAATTG+AGG | - | chr3.3:87023481-87023500 | MS.gene42668:intron | 35.0% | |
| CTCAATTTCTTGCCAATAGT+AGG | + | chr3.3:87023483-87023502 | None:intergenic | 35.0% | |
| GCAAATCGAACAAAGTCATA+TGG | + | chr3.3:87023648-87023667 | None:intergenic | 35.0% | |
| GCATGTTCATTTGTGTTCAT+TGG | - | chr3.3:87024024-87024043 | MS.gene42668:CDS | 35.0% | |
| GCTATTGAGAAAGTTGGAAT+TGG | - | chr3.3:87023084-87023103 | MS.gene42668:CDS | 35.0% | |
| GGATATGTACTCTATTCCAA+AGG | - | chr3.3:87023446-87023465 | MS.gene42668:intron | 35.0% | |
| GGATTGACAGAAATTTGATG+CGG | - | chr3.3:87023837-87023856 | MS.gene42668:CDS | 35.0% | |
| TATGTTTGGATAGTAACCGA+TGG | - | chr3.3:87022847-87022866 | MS.gene42668:CDS | 35.0% | |
| TCGAACAAAGTCATATGGTA+AGG | + | chr3.3:87023643-87023662 | None:intergenic | 35.0% | |
| TCTAGAAATTTGGACACAGA+AGG | - | chr3.3:87023354-87023373 | MS.gene42668:intron | 35.0% | |
| TCTTGACAGTTGAACAACTA+AGG | - | chr3.3:87024751-87024770 | MS.gene42668:CDS | 35.0% | |
| TGCTACAATTGCATTAGCAA+TGG | - | chr3.3:87023062-87023081 | MS.gene42668:CDS | 35.0% | |
| ! | AGATTTAAAACTGGTGGCTT+TGG | - | chr3.3:87025035-87025054 | MS.gene42668:CDS | 35.0% |
| ! | ATGGTTTTCCTTCTCAACTA+TGG | - | chr3.3:87024125-87024144 | MS.gene42668:intron | 35.0% |
| ! | GAACCAAGATTTAAAACTGG+TGG | - | chr3.3:87025029-87025048 | MS.gene42668:CDS | 35.0% |
| ! | GGATTTTGGACACCAAATAA+AGG | - | chr3.3:87023327-87023346 | MS.gene42668:intron | 35.0% |
| ! | GTGAAAAGAGAGTTGGATTT+TGG | - | chr3.3:87023313-87023332 | MS.gene42668:intron | 35.0% |
| ! | TTTTGATGTGAGGGAATCAA+TGG | - | chr3.3:87022897-87022916 | MS.gene42668:CDS | 35.0% |
| !! | AGTGGTGATTTTGATGTTGT+TGG | - | chr3.3:87023240-87023259 | MS.gene42668:CDS | 35.0% |
| !! | GTGATTTTGATGTTGTTGGT+GGG | - | chr3.3:87023244-87023263 | MS.gene42668:CDS | 35.0% |
| !!! | AAGCCACCAGTTTTAAATCT+TGG | + | chr3.3:87025035-87025054 | None:intergenic | 35.0% |
| ACAATGCCATACACAGAATC+TGG | - | chr3.3:87023910-87023929 | MS.gene42668:CDS | 40.0% | |
| ACAGAAATTTGATGCGGTAG+TGG | - | chr3.3:87023843-87023862 | MS.gene42668:CDS | 40.0% | |
| AGAAATTTGATGCGGTAGTG+GGG | - | chr3.3:87023845-87023864 | MS.gene42668:CDS | 40.0% | |
| AGCATAGACCATAGTTGAGA+AGG | + | chr3.3:87024136-87024155 | None:intergenic | 40.0% | |
| ATCAGATTGGCACAAGCTTA+TGG | - | chr3.3:87024106-87024125 | MS.gene42668:intron | 40.0% | |
| CAAGATTTGTGGTGGTTGTA+TGG | - | chr3.3:87024676-87024695 | MS.gene42668:CDS | 40.0% | |
| CAGAAATTTGATGCGGTAGT+GGG | - | chr3.3:87023844-87023863 | MS.gene42668:CDS | 40.0% | |
| GAGTAACTTGGCAAGATTTG+TGG | - | chr3.3:87024665-87024684 | MS.gene42668:CDS | 40.0% | |
| GCAATGGCTATTGAGAAAGT+TGG | - | chr3.3:87023078-87023097 | MS.gene42668:CDS | 40.0% | |
| GCTTGTGTTGAATTGGTACT+AGG | + | chr3.3:87023567-87023586 | None:intergenic | 40.0% | |
| GGATGGGAAATTCCTACTAT+TGG | - | chr3.3:87023468-87023487 | MS.gene42668:intron | 40.0% | |
| GTACTCTATTCCAAAGGGAT+GGG | - | chr3.3:87023452-87023471 | MS.gene42668:intron | 40.0% | |
| TAACTTGGCAAGATTTGTGG+TGG | - | chr3.3:87024668-87024687 | MS.gene42668:CDS | 40.0% | |
| TGATGAGTCAAGGCTATGTT+TGG | - | chr3.3:87022833-87022852 | MS.gene42668:CDS | 40.0% | |
| TGTACTCTATTCCAAAGGGA+TGG | - | chr3.3:87023451-87023470 | MS.gene42668:intron | 40.0% | |
| TTGAGCGATCAACTCATTGT+AGG | + | chr3.3:87023697-87023716 | None:intergenic | 40.0% | |
| TTGATCGCTCAACTTTACGA+CGG | - | chr3.3:87023705-87023724 | MS.gene42668:intron | 40.0% | |
| TTGGATAGTAACCGATGGTA+TGG | - | chr3.3:87022852-87022871 | MS.gene42668:CDS | 40.0% | |
| ! | ATGAATGTCGGCTATCTCAA+AGG | - | chr3.3:87024813-87024832 | MS.gene42668:CDS | 40.0% |
| !! | GAATCAATGGAAGGAGTGTT+GGG | - | chr3.3:87022910-87022929 | MS.gene42668:CDS | 40.0% |
| !! | GGTGATTTTGATGTTGTTGG+TGG | - | chr3.3:87023243-87023262 | MS.gene42668:CDS | 40.0% |
| !!! | CTTTTTGAAGCCACTCACAT+GGG | - | chr3.3:87023984-87024003 | MS.gene42668:CDS | 40.0% |
| ACCAATTCAACACAAGCCAC+TGG | - | chr3.3:87023570-87023589 | MS.gene42668:intron | 45.0% | |
| CACAGAATCTGGTGTGACAA+TGG | - | chr3.3:87023921-87023940 | MS.gene42668:CDS | 45.0% | |
| CCATGTGAGTGGCTTCAAAA+AGG | + | chr3.3:87023986-87024005 | None:intergenic | 45.0% | |
| GATATCAATGCAGAAGCCAG+TGG | + | chr3.3:87023589-87023608 | None:intergenic | 45.0% | |
| GATGTGAGGGAATCAATGGA+AGG | - | chr3.3:87022901-87022920 | MS.gene42668:CDS | 45.0% | |
| GGAATAGAGTACATATCCCC+TGG | + | chr3.3:87023444-87023463 | None:intergenic | 45.0% | |
| GTAGGAATTTCCCATCCCTT+TGG | + | chr3.3:87023465-87023484 | None:intergenic | 45.0% | |
| GTCACACCAGATTCTGTGTA+TGG | + | chr3.3:87023919-87023938 | None:intergenic | 45.0% | |
| TGATCGCTCAACTTTACGAC+GGG | - | chr3.3:87023706-87023725 | MS.gene42668:intron | 45.0% | |
| TGGTGTACGTCTGTAATAGC+TGG | + | chr3.3:87024777-87024796 | None:intergenic | 45.0% | |
| TTGGACACAGAAGGCCTAAT+AGG | - | chr3.3:87023363-87023382 | MS.gene42668:intron | 45.0% | |
| TTGGGTCAATCATATGGCCA+GGG | - | chr3.3:87023424-87023443 | MS.gene42668:intron | 45.0% | |
| ! | GAAATTTGATGCGGTAGTGG+GGG | - | chr3.3:87023846-87023865 | MS.gene42668:CDS | 45.0% |
| ! | GGAATCAATGGAAGGAGTGT+TGG | - | chr3.3:87022909-87022928 | MS.gene42668:CDS | 45.0% |
| ! | GGTGATGGTGAAAAGAGAGT+TGG | - | chr3.3:87023306-87023325 | MS.gene42668:intron | 45.0% |
| ! | GGTGGTTGTATGGGTTTTTG+TGG | - | chr3.3:87024686-87024705 | MS.gene42668:CDS | 45.0% |
| ! | GTTCGATTTGCAAAGCCTGA+TGG | - | chr3.3:87023657-87023676 | MS.gene42668:intron | 45.0% |
| !!! | CCTTTTTGAAGCCACTCACA+TGG | - | chr3.3:87023983-87024002 | MS.gene42668:CDS | 45.0% |
| ACCCAAAGATCCCATGTGAG+TGG | + | chr3.3:87023997-87024016 | None:intergenic | 50.0% | |
| AGCCACTCACATGGGATCTT+TGG | - | chr3.3:87023992-87024011 | MS.gene42668:CDS | 50.0% | |
| CTTGGGTCAATCATATGGCC+AGG | - | chr3.3:87023423-87023442 | MS.gene42668:intron | 50.0% | |
| GATCGCTCAACTTTACGACG+GGG | - | chr3.3:87023707-87023726 | MS.gene42668:intron | 50.0% | |
| GCCACTCACATGGGATCTTT+GGG | - | chr3.3:87023993-87024012 | MS.gene42668:CDS | 50.0% | |
| GGACCACTCTCTCATCAGAT+TGG | - | chr3.3:87024093-87024112 | MS.gene42668:intron | 50.0% | |
| GTGCCAATCTGATGAGAGAG+TGG | + | chr3.3:87024099-87024118 | None:intergenic | 50.0% | |
| TGGGTCAATCATATGGCCAG+GGG | - | chr3.3:87023425-87023444 | MS.gene42668:intron | 50.0% | |
| ! | GCCAGTGGCTTGTGTTGAAT+TGG | + | chr3.3:87023574-87023593 | None:intergenic | 50.0% |
| ! | TGCAAAGCCTGATGGTGAGA+TGG | - | chr3.3:87023665-87023684 | MS.gene42668:intron | 50.0% |
| !! | TGGAAGGAGTGTTGGGTGTT+AGG | - | chr3.3:87022917-87022936 | MS.gene42668:CDS | 50.0% |
| GTTCCTGCCATCTCACCATC+AGG | + | chr3.3:87023675-87023694 | None:intergenic | 55.0% | |
| ! | AAGCCTGATGGTGAGATGGC+AGG | - | chr3.3:87023669-87023688 | MS.gene42668:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 87022832 | 87025097 | 87022832 | ID=MS.gene42668 |
| chr3.3 | mRNA | 87022832 | 87025097 | 87022832 | ID=MS.gene42668.t1;Parent=MS.gene42668 |
| chr3.3 | exon | 87024201 | 87025097 | 87024201 | ID=MS.gene42668.t1.exon1;Parent=MS.gene42668.t1 |
| chr3.3 | CDS | 87024201 | 87025097 | 87024201 | ID=cds.MS.gene42668.t1;Parent=MS.gene42668.t1 |
| chr3.3 | exon | 87023770 | 87024082 | 87023770 | ID=MS.gene42668.t1.exon2;Parent=MS.gene42668.t1 |
| chr3.3 | CDS | 87023770 | 87024082 | 87023770 | ID=cds.MS.gene42668.t1;Parent=MS.gene42668.t1 |
| chr3.3 | exon | 87022832 | 87023277 | 87022832 | ID=MS.gene42668.t1.exon3;Parent=MS.gene42668.t1 |
| chr3.3 | CDS | 87022832 | 87023277 | 87022832 | ID=cds.MS.gene42668.t1;Parent=MS.gene42668.t1 |
| Gene Sequence |
| Protein sequence |
