Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02681.t1 | KEH35890.1 | 95 | 540 | 27 | 0 | 1 | 540 | 141 | 680 | 4.50E-301 | 1043.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02681.t1 | O81078 | 52.3 | 541 | 229 | 9 | 1 | 540 | 241 | 753 | 5.3e-157 | 555.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02681.t1 | A0A072VCN2 | 95.0 | 540 | 27 | 0 | 1 | 540 | 141 | 680 | 3.3e-301 | 1043.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene02681 | MS.gene80157 | PPI |
MS.gene02681 | MS.gene014935 | PPI |
MS.gene42668 | MS.gene02681 | PPI |
MS.gene02681 | MS.gene80159 | PPI |
MS.gene02681 | MS.gene037906 | PPI |
MS.gene02681 | MS.gene43349 | PPI |
MS.gene02681 | MS.gene42668 | PPI |
MS.gene32730 | MS.gene02681 | PPI |
MS.gene02681 | MS.gene41327 | PPI |
MS.gene02681 | MS.gene53723 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02681.t1 | MTR_3g105595 | 94.824 | 541 | 28 | 0 | 1 | 541 | 141 | 681 | 0.0 | 1028 |
MS.gene02681.t1 | MTR_3g105610 | 89.299 | 542 | 56 | 1 | 1 | 540 | 256 | 797 | 0.0 | 974 |
MS.gene02681.t1 | MTR_8g073210 | 40.951 | 547 | 302 | 14 | 1 | 540 | 248 | 780 | 3.13e-116 | 366 |
MS.gene02681.t1 | MTR_3g115910 | 38.113 | 551 | 310 | 14 | 1 | 542 | 247 | 775 | 1.11e-113 | 355 |
MS.gene02681.t1 | MTR_3g115910 | 37.887 | 549 | 310 | 14 | 1 | 540 | 247 | 773 | 2.64e-111 | 353 |
MS.gene02681.t1 | MTR_3g115910 | 37.887 | 549 | 310 | 14 | 1 | 540 | 292 | 818 | 5.32e-111 | 353 |
MS.gene02681.t1 | MTR_5g024350 | 37.184 | 554 | 313 | 14 | 1 | 540 | 247 | 779 | 7.44e-111 | 352 |
MS.gene02681.t1 | MTR_5g024350 | 37.184 | 554 | 313 | 14 | 1 | 540 | 279 | 811 | 9.72e-111 | 353 |
MS.gene02681.t1 | MTR_2g088450 | 36.861 | 548 | 320 | 14 | 1 | 540 | 154 | 683 | 5.92e-105 | 334 |
MS.gene02681.t1 | MTR_8g073490 | 37.030 | 559 | 311 | 17 | 1 | 541 | 247 | 782 | 1.17e-104 | 336 |
MS.gene02681.t1 | MTR_2g088450 | 36.861 | 548 | 320 | 14 | 1 | 540 | 187 | 716 | 1.19e-104 | 334 |
MS.gene02681.t1 | MTR_2g088450 | 36.861 | 548 | 320 | 14 | 1 | 540 | 252 | 781 | 3.18e-104 | 334 |
MS.gene02681.t1 | MTR_4g087925 | 36.029 | 544 | 297 | 13 | 1 | 541 | 266 | 761 | 1.28e-100 | 325 |
MS.gene02681.t1 | MTR_2g015270 | 35.229 | 545 | 299 | 13 | 1 | 541 | 263 | 757 | 6.51e-97 | 317 |
MS.gene02681.t1 | MTR_2g088430 | 35.660 | 530 | 312 | 14 | 1 | 519 | 245 | 756 | 1.16e-95 | 311 |
MS.gene02681.t1 | MTR_5g059920 | 34.559 | 544 | 307 | 12 | 1 | 541 | 264 | 761 | 2.73e-95 | 307 |
MS.gene02681.t1 | MTR_5g059920 | 34.926 | 544 | 305 | 13 | 1 | 541 | 264 | 761 | 4.22e-94 | 307 |
MS.gene02681.t1 | MTR_2g088450 | 38.612 | 461 | 259 | 12 | 1 | 454 | 252 | 695 | 8.28e-93 | 299 |
MS.gene02681.t1 | MTR_5g059900 | 34.559 | 544 | 307 | 12 | 1 | 541 | 170 | 667 | 1.09e-91 | 297 |
MS.gene02681.t1 | MTR_2g015260 | 32.477 | 545 | 306 | 12 | 1 | 541 | 72 | 558 | 3.32e-89 | 289 |
MS.gene02681.t1 | MTR_0018s0240 | 32.044 | 543 | 303 | 10 | 1 | 541 | 191 | 669 | 5.25e-87 | 286 |
MS.gene02681.t1 | MTR_0018s0230 | 30.657 | 548 | 303 | 12 | 1 | 541 | 169 | 646 | 2.88e-82 | 270 |
MS.gene02681.t1 | MTR_0018s0230 | 30.657 | 548 | 303 | 12 | 1 | 541 | 169 | 646 | 3.45e-81 | 270 |
MS.gene02681.t1 | MTR_8g073210 | 39.173 | 411 | 232 | 12 | 1 | 405 | 248 | 646 | 4.62e-79 | 261 |
MS.gene02681.t1 | MTR_3g115910 | 36.908 | 401 | 225 | 11 | 1 | 393 | 247 | 627 | 2.25e-75 | 252 |
MS.gene02681.t1 | MTR_3g115910 | 36.908 | 401 | 225 | 11 | 1 | 393 | 292 | 672 | 3.40e-75 | 252 |
MS.gene02681.t1 | MTR_2g088450 | 36.341 | 410 | 237 | 12 | 1 | 403 | 154 | 546 | 5.99e-73 | 243 |
MS.gene02681.t1 | MTR_8g073210 | 38.346 | 399 | 228 | 12 | 1 | 393 | 248 | 634 | 1.07e-72 | 244 |
MS.gene02681.t1 | MTR_2g015310 | 29.476 | 553 | 303 | 16 | 1 | 541 | 261 | 738 | 1.15e-72 | 249 |
MS.gene02681.t1 | MTR_2g088450 | 36.341 | 410 | 237 | 12 | 1 | 403 | 252 | 644 | 4.43e-72 | 243 |
MS.gene02681.t1 | MTR_2g015290 | 30.601 | 549 | 307 | 18 | 1 | 541 | 259 | 741 | 4.46e-71 | 245 |
MS.gene02681.t1 | MTR_6g045087 | 38.957 | 326 | 189 | 5 | 222 | 540 | 39 | 361 | 5.98e-71 | 235 |
MS.gene02681.t1 | MTR_2g088450 | 35.714 | 406 | 237 | 12 | 1 | 399 | 154 | 542 | 1.09e-68 | 231 |
MS.gene02681.t1 | MTR_2g015280 | 29.872 | 549 | 305 | 16 | 1 | 541 | 258 | 734 | 1.31e-68 | 238 |
MS.gene02681.t1 | MTR_5g060330 | 34.295 | 312 | 167 | 9 | 1 | 310 | 170 | 445 | 6.30e-43 | 162 |
MS.gene02681.t1 | MTR_8g073210 | 33.443 | 305 | 186 | 11 | 1 | 299 | 248 | 541 | 2.25e-34 | 137 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02681.t1 | AT2G29120 | 51.287 | 544 | 233 | 10 | 1 | 541 | 253 | 767 | 0.0 | 558 |
MS.gene02681.t1 | AT2G24720 | 50.832 | 541 | 249 | 6 | 1 | 541 | 246 | 769 | 0.0 | 553 |
MS.gene02681.t1 | AT2G29100 | 52.214 | 542 | 230 | 9 | 1 | 541 | 243 | 756 | 2.82e-180 | 533 |
MS.gene02681.t1 | AT2G29100 | 52.214 | 542 | 230 | 9 | 1 | 541 | 241 | 754 | 2.94e-180 | 532 |
MS.gene02681.t1 | AT2G29110 | 52.768 | 542 | 232 | 9 | 1 | 541 | 244 | 762 | 1.55e-179 | 531 |
MS.gene02681.t1 | AT2G24710 | 48.524 | 542 | 263 | 6 | 1 | 542 | 269 | 794 | 1.61e-179 | 526 |
MS.gene02681.t1 | AT2G29110 | 52.768 | 542 | 232 | 9 | 1 | 541 | 245 | 763 | 1.66e-179 | 531 |
MS.gene02681.t1 | AT2G24710 | 48.429 | 541 | 263 | 6 | 1 | 541 | 245 | 769 | 5.92e-178 | 525 |
MS.gene02681.t1 | AT2G24710 | 48.429 | 541 | 263 | 6 | 1 | 541 | 269 | 793 | 6.60e-178 | 526 |
MS.gene02681.t1 | AT5G27100 | 48.155 | 542 | 255 | 8 | 1 | 541 | 246 | 762 | 5.20e-176 | 520 |
MS.gene02681.t1 | AT5G11210 | 45.488 | 543 | 277 | 5 | 1 | 542 | 177 | 701 | 3.10e-171 | 502 |
MS.gene02681.t1 | AT5G11210 | 45.488 | 543 | 277 | 5 | 1 | 542 | 169 | 693 | 3.21e-171 | 502 |
MS.gene02681.t1 | AT5G11210 | 45.488 | 543 | 277 | 5 | 1 | 542 | 169 | 693 | 3.21e-171 | 502 |
MS.gene02681.t1 | AT5G11210 | 45.488 | 543 | 277 | 5 | 1 | 542 | 169 | 693 | 3.28e-171 | 502 |
MS.gene02681.t1 | AT5G11210 | 45.488 | 543 | 277 | 5 | 1 | 542 | 251 | 775 | 1.20e-170 | 503 |
MS.gene02681.t1 | AT5G11210 | 45.488 | 543 | 277 | 5 | 1 | 542 | 251 | 775 | 2.09e-170 | 503 |
MS.gene02681.t1 | AT5G11210 | 45.488 | 543 | 277 | 5 | 1 | 542 | 251 | 775 | 2.09e-170 | 503 |
MS.gene02681.t1 | AT5G11210 | 45.287 | 541 | 277 | 5 | 1 | 540 | 169 | 691 | 8.70e-169 | 499 |
MS.gene02681.t1 | AT5G11210 | 45.287 | 541 | 277 | 5 | 1 | 540 | 193 | 715 | 1.18e-168 | 500 |
MS.gene02681.t1 | AT5G11210 | 45.287 | 541 | 277 | 5 | 1 | 540 | 251 | 773 | 5.84e-168 | 500 |
MS.gene02681.t1 | AT5G11180 | 44.834 | 542 | 283 | 6 | 1 | 540 | 250 | 777 | 1.36e-164 | 493 |
MS.gene02681.t1 | AT4G31710 | 46.950 | 541 | 255 | 7 | 1 | 541 | 246 | 754 | 1.33e-161 | 483 |
MS.gene02681.t1 | AT4G31710 | 45.841 | 541 | 254 | 7 | 1 | 541 | 269 | 770 | 1.75e-156 | 470 |
MS.gene02681.t1 | AT5G11180 | 39.411 | 543 | 252 | 9 | 1 | 541 | 250 | 717 | 7.58e-129 | 399 |
MS.gene02681.t1 | AT1G42540 | 36.794 | 549 | 321 | 13 | 1 | 541 | 245 | 775 | 3.60e-110 | 350 |
MS.gene02681.t1 | AT1G42540 | 36.794 | 549 | 321 | 13 | 1 | 541 | 245 | 775 | 3.60e-110 | 350 |
MS.gene02681.t1 | AT1G42540 | 36.794 | 549 | 321 | 13 | 1 | 541 | 245 | 775 | 3.60e-110 | 350 |
MS.gene02681.t1 | AT2G17260 | 38.940 | 547 | 305 | 19 | 1 | 540 | 251 | 775 | 1.78e-107 | 343 |
MS.gene02681.t1 | AT5G48400 | 37.590 | 556 | 273 | 18 | 1 | 547 | 253 | 743 | 7.76e-107 | 337 |
MS.gene02681.t1 | AT4G35290 | 37.500 | 552 | 312 | 17 | 1 | 543 | 247 | 774 | 1.13e-106 | 337 |
MS.gene02681.t1 | AT5G48410 | 38.225 | 552 | 270 | 16 | 1 | 547 | 255 | 740 | 1.64e-106 | 336 |
MS.gene02681.t1 | AT5G48400 | 37.455 | 550 | 271 | 17 | 1 | 541 | 253 | 738 | 9.39e-105 | 334 |
MS.gene02681.t1 | AT5G48410 | 38.095 | 546 | 268 | 15 | 1 | 541 | 255 | 735 | 1.39e-104 | 334 |
MS.gene02681.t1 | AT4G35290 | 37.341 | 549 | 311 | 17 | 1 | 540 | 247 | 771 | 3.47e-104 | 334 |
MS.gene02681.t1 | AT4G35290 | 37.341 | 549 | 311 | 17 | 1 | 540 | 247 | 771 | 3.47e-104 | 334 |
MS.gene02681.t1 | AT4G35290 | 37.341 | 549 | 311 | 17 | 1 | 540 | 247 | 771 | 3.47e-104 | 334 |
MS.gene02681.t1 | AT4G35290 | 37.341 | 549 | 311 | 17 | 1 | 540 | 247 | 771 | 3.47e-104 | 334 |
MS.gene02681.t1 | AT4G35290 | 37.341 | 549 | 311 | 17 | 1 | 540 | 247 | 771 | 3.47e-104 | 334 |
MS.gene02681.t1 | AT1G05200 | 34.426 | 549 | 332 | 14 | 1 | 541 | 275 | 803 | 4.20e-102 | 327 |
MS.gene02681.t1 | AT1G05200 | 34.426 | 549 | 332 | 14 | 1 | 541 | 275 | 803 | 4.20e-102 | 327 |
MS.gene02681.t1 | AT3G51480 | 35.495 | 555 | 323 | 14 | 1 | 547 | 244 | 771 | 5.67e-102 | 325 |
MS.gene02681.t1 | AT1G05200 | 34.307 | 548 | 332 | 14 | 1 | 540 | 275 | 802 | 1.85e-100 | 325 |
MS.gene02681.t1 | AT1G05200 | 34.307 | 548 | 332 | 14 | 1 | 540 | 275 | 802 | 1.85e-100 | 325 |
MS.gene02681.t1 | AT1G05200 | 34.307 | 548 | 332 | 14 | 1 | 540 | 275 | 802 | 1.85e-100 | 325 |
MS.gene02681.t1 | AT3G51480 | 35.401 | 548 | 319 | 14 | 1 | 540 | 154 | 674 | 1.04e-99 | 320 |
MS.gene02681.t1 | AT3G51480 | 35.401 | 548 | 319 | 14 | 1 | 540 | 244 | 764 | 6.21e-99 | 320 |
MS.gene02681.t1 | AT3G51480 | 35.401 | 548 | 319 | 14 | 1 | 540 | 244 | 764 | 6.21e-99 | 320 |
MS.gene02681.t1 | AT2G32390 | 36.496 | 548 | 328 | 14 | 1 | 541 | 160 | 694 | 8.63e-99 | 318 |
MS.gene02681.t1 | AT2G32390 | 36.496 | 548 | 328 | 14 | 1 | 541 | 204 | 738 | 1.79e-98 | 318 |
MS.gene02681.t1 | AT2G32390 | 36.496 | 548 | 328 | 14 | 1 | 541 | 262 | 796 | 6.72e-98 | 318 |
MS.gene02681.t1 | AT2G32400 | 36.679 | 548 | 316 | 13 | 1 | 540 | 245 | 769 | 1.60e-97 | 317 |
MS.gene02681.t1 | AT3G07520 | 37.226 | 548 | 274 | 17 | 1 | 540 | 260 | 745 | 1.87e-96 | 312 |
MS.gene02681.t1 | AT5G48410 | 35.531 | 546 | 255 | 16 | 1 | 541 | 255 | 708 | 1.29e-88 | 291 |
MS.gene02681.t1 | AT5G48410 | 35.165 | 546 | 253 | 16 | 1 | 541 | 255 | 704 | 1.99e-86 | 285 |
MS.gene02681.t1 | AT5G11210 | 50.000 | 254 | 125 | 2 | 288 | 540 | 13 | 265 | 6.44e-83 | 265 |
MS.gene02681.t1 | AT1G42540 | 36.098 | 410 | 239 | 10 | 1 | 403 | 245 | 638 | 9.52e-79 | 260 |
MS.gene02681.t1 | AT2G32390 | 35.646 | 418 | 251 | 12 | 1 | 412 | 262 | 667 | 1.17e-76 | 255 |
MS.gene02681.t1 | AT3G04110 | 30.309 | 551 | 302 | 16 | 1 | 551 | 244 | 712 | 2.88e-75 | 253 |
MS.gene02681.t1 | AT3G04110 | 29.945 | 541 | 300 | 14 | 1 | 541 | 244 | 705 | 3.84e-74 | 251 |
MS.gene02681.t1 | AT2G32390 | 34.699 | 415 | 253 | 12 | 1 | 409 | 262 | 664 | 2.14e-73 | 247 |
MS.gene02681.t1 | AT2G32390 | 34.699 | 415 | 253 | 12 | 1 | 409 | 262 | 664 | 2.14e-73 | 247 |
MS.gene02681.t1 | AT1G05200 | 33.253 | 415 | 251 | 12 | 1 | 408 | 275 | 670 | 1.12e-70 | 239 |
MS.gene02681.t1 | AT2G32390 | 34.250 | 400 | 245 | 12 | 1 | 394 | 262 | 649 | 1.52e-67 | 231 |
MS.gene02681.t1 | AT1G05200 | 32.668 | 401 | 244 | 12 | 1 | 394 | 275 | 656 | 5.97e-65 | 224 |
MS.gene02681.t1 | AT3G04110 | 26.617 | 541 | 290 | 14 | 1 | 541 | 244 | 677 | 1.54e-56 | 202 |
Find 100 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTGAAAAGAGAGTTGGATTT+TGG | 0.161309 | 3.3:+86987430 | MS.gene02681:CDS |
ACTCTCATTGTAATCAAATT+TGG | 0.184403 | 3.3:-86987229 | None:intergenic |
TGTTATTATTATTGCCTATT+AGG | 0.199649 | 3.3:-86987494 | None:intergenic |
TTGTCAAACACTAGATTTAA+TGG | 0.214752 | 3.3:+86987330 | MS.gene02681:CDS |
TTTCTAGATAGCCCTTTATT+TGG | 0.225965 | 3.3:-86987456 | None:intergenic |
TAAAGGGCTATCTAGAAATT+TGG | 0.231236 | 3.3:+86987461 | MS.gene02681:CDS |
CCCTATATTAAGCACTTTCT+TGG | 0.239631 | 3.3:+86989092 | MS.gene02681:CDS |
TCATCTAGTTTCTTTGTTCT+AGG | 0.242984 | 3.3:-86987066 | None:intergenic |
AGCCACTCACATGGGATCTT+TGG | 0.252189 | 3.3:+86988109 | MS.gene02681:CDS |
TTTATAAAAGGAAGTGTAAA+TGG | 0.252930 | 3.3:+86989041 | MS.gene02681:CDS |
AAGTTTGGTATTTCACAAAA+TGG | 0.258351 | 3.3:+86987288 | MS.gene02681:CDS |
TGTTCATTGGATTTGTTGTT+TGG | 0.263168 | 3.3:+86988154 | MS.gene02681:CDS |
GCATGTTCATTTGTGTTCAT+TGG | 0.291980 | 3.3:+86988141 | MS.gene02681:CDS |
CAAGATTTGTGGTGGTTGTA+TGG | 0.309269 | 3.3:+86988793 | MS.gene02681:CDS |
ATCAGATTGGCACAAGCTTA+TGG | 0.317813 | 3.3:+86988223 | MS.gene02681:CDS |
AGATTTAAAACTGGTGGCTT+TGG | 0.326155 | 3.3:+86989152 | MS.gene02681:CDS |
ATAGAATAAACAATGATTTC+AGG | 0.330201 | 3.3:+86988187 | MS.gene02681:CDS |
TTGGACACAGAAGGCCTAAT+AGG | 0.347096 | 3.3:+86987480 | MS.gene02681:CDS |
TCCAAGAAAGTGCTTAATAT+AGG | 0.347975 | 3.3:-86989093 | None:intergenic |
TGGAAGGAGTGTTGGGTGTT+AGG | 0.354875 | 3.3:+86987034 | MS.gene02681:CDS |
CCAAGAAAGTGCTTAATATA+GGG | 0.362025 | 3.3:-86989092 | None:intergenic |
GCTATTGAGAAAGTTGGAAT+TGG | 0.368469 | 3.3:+86987201 | MS.gene02681:CDS |
GCCACTCACATGGGATCTTT+GGG | 0.377419 | 3.3:+86988110 | MS.gene02681:CDS |
GTTCATTGGATTTGTTGTTT+GGG | 0.383921 | 3.3:+86988155 | MS.gene02681:CDS |
CCATGTGAGTGGCTTCAAAA+AGG | 0.389028 | 3.3:-86988100 | None:intergenic |
CATTGTTTATTCTATGTTCA+AGG | 0.390884 | 3.3:-86988179 | None:intergenic |
GGATGGGAAATTCCTACTAT+TGG | 0.394620 | 3.3:+86987585 | MS.gene02681:CDS |
ACTAGATTTAATGGTCTTAG+TGG | 0.396942 | 3.3:+86987339 | MS.gene02681:CDS |
TTGAGCGATCAACTCATTGT+AGG | 0.399010 | 3.3:-86987811 | None:intergenic |
TGATGAGTCAAGGCTATGTT+TGG | 0.402077 | 3.3:+86986950 | MS.gene02681:CDS |
GTAGGAATTTCCCATCCCTT+TGG | 0.420382 | 3.3:-86987579 | None:intergenic |
CTACTATTGGCAAGAAATTG+AGG | 0.428442 | 3.3:+86987598 | MS.gene02681:CDS |
GTTGAACCAAGATTTAAAAC+TGG | 0.428995 | 3.3:+86989143 | MS.gene02681:CDS |
GCCAGTGGCTTGTGTTGAAT+TGG | 0.433601 | 3.3:-86987688 | None:intergenic |
ATGATCTTGGGTCAATCATA+TGG | 0.436476 | 3.3:+86987535 | MS.gene02681:CDS |
ACAATGCCATACACAGAATC+TGG | 0.438361 | 3.3:+86988027 | MS.gene02681:CDS |
TCATCTTATTCTTTAGAAGT+TGG | 0.441150 | 3.3:-86988911 | None:intergenic |
CTCAATTTCTTGCCAATAGT+AGG | 0.447370 | 3.3:-86987597 | None:intergenic |
CAGAAATTTGATGCGGTAGT+GGG | 0.453072 | 3.3:+86987961 | MS.gene02681:intron |
AAGTCATATGGTAAGGCATA+AGG | 0.455526 | 3.3:-86987750 | None:intergenic |
GCAAATCGAACAAAGTCATA+TGG | 0.457326 | 3.3:-86987762 | None:intergenic |
AAATTTGTGTCAACAAGTGT+TGG | 0.461667 | 3.3:-86987129 | None:intergenic |
ACAGAAATTTGATGCGGTAG+TGG | 0.468808 | 3.3:+86987960 | MS.gene02681:intron |
GTTCCTGCCATCTCACCATC+AGG | 0.472388 | 3.3:-86987789 | None:intergenic |
CTTGGGTCAATCATATGGCC+AGG | 0.478903 | 3.3:+86987540 | MS.gene02681:CDS |
TAGAATAAACAATGATTTCA+GGG | 0.480077 | 3.3:+86988188 | MS.gene02681:CDS |
AAGATTTGTGGTGGTTGTAT+GGG | 0.480530 | 3.3:+86988794 | MS.gene02681:CDS |
GGAATCAATGGAAGGAGTGT+TGG | 0.481226 | 3.3:+86987026 | MS.gene02681:CDS |
GTCACACCAGATTCTGTGTA+TGG | 0.482816 | 3.3:-86988033 | None:intergenic |
GAATCAATGGAAGGAGTGTT+GGG | 0.489443 | 3.3:+86987027 | MS.gene02681:CDS |
TATGAGATAATTAATGTGAT+TGG | 0.490156 | 3.3:+86987402 | MS.gene02681:CDS |
TTGTTTCAATGAAAGACAAC+AGG | 0.492606 | 3.3:+86988061 | MS.gene02681:CDS |
GCAATGGCTATTGAGAAAGT+TGG | 0.497583 | 3.3:+86987195 | MS.gene02681:CDS |
GCTTGTGTTGAATTGGTACT+AGG | 0.497766 | 3.3:-86987681 | None:intergenic |
TGATCGCTCAACTTTACGAC+GGG | 0.518428 | 3.3:+86987823 | MS.gene02681:CDS |
GGTGATGGTGAAAAGAGAGT+TGG | 0.519922 | 3.3:+86987423 | MS.gene02681:CDS |
GAGTAACTTGGCAAGATTTG+TGG | 0.524831 | 3.3:+86988782 | MS.gene02681:CDS |
TGTACTCTATTCCAAAGGGA+TGG | 0.525388 | 3.3:+86987568 | MS.gene02681:CDS |
TGGTGTACGTCTGTAATAGC+TGG | 0.533257 | 3.3:-86988891 | None:intergenic |
TTGGATAGTAACCGATGGTA+TGG | 0.535162 | 3.3:+86986969 | MS.gene02681:CDS |
TCGAACAAAGTCATATGGTA+AGG | 0.538162 | 3.3:-86987757 | None:intergenic |
TCTTGACAGTTGAACAACTA+AGG | 0.538252 | 3.3:+86988868 | MS.gene02681:CDS |
GGACCACTCTCTCATCAGAT+TGG | 0.543596 | 3.3:+86988210 | MS.gene02681:CDS |
AGCATAGACCATAGTTGAGA+AGG | 0.554038 | 3.3:-86988250 | None:intergenic |
GTACTCTATTCCAAAGGGAT+GGG | 0.554830 | 3.3:+86987569 | MS.gene02681:CDS |
AGAAATTTGATGCGGTAGTG+GGG | 0.561352 | 3.3:+86987962 | MS.gene02681:intron |
GATATGTACTCTATTCCAAA+GGG | 0.562232 | 3.3:+86987564 | MS.gene02681:CDS |
GAACCAAGATTTAAAACTGG+TGG | 0.563610 | 3.3:+86989146 | MS.gene02681:CDS |
AAGCCTGATGGTGAGATGGC+AGG | 0.567308 | 3.3:+86987786 | MS.gene02681:CDS |
CTAAAGAATAAGATGAATGT+CGG | 0.571534 | 3.3:+86988918 | MS.gene02681:CDS |
TAGTTGTTCAAAGTATGTCA+TGG | 0.581001 | 3.3:+86989121 | MS.gene02681:CDS |
AGAGAAAGTAGTGAGTAACT+TGG | 0.583063 | 3.3:+86988770 | MS.gene02681:CDS |
TTGGGTCAATCATATGGCCA+GGG | 0.583817 | 3.3:+86987541 | MS.gene02681:CDS |
GGAATAGAGTACATATCCCC+TGG | 0.583843 | 3.3:-86987558 | None:intergenic |
ATAAAAGGAAGTGTAAATGG+TGG | 0.589834 | 3.3:+86989044 | MS.gene02681:CDS |
ATGAATGTCGGCTATCTCAA+AGG | 0.594170 | 3.3:+86988930 | MS.gene02681:CDS |
ATAATTAATGTGATTGGTGA+TGG | 0.594746 | 3.3:+86987408 | MS.gene02681:CDS |
TGCTACAATTGCATTAGCAA+TGG | 0.595360 | 3.3:+86987179 | MS.gene02681:CDS |
GTTCGATTTGCAAAGCCTGA+TGG | 0.595979 | 3.3:+86987774 | MS.gene02681:CDS |
GAATAAATTAGCCATACCAT+CGG | 0.598751 | 3.3:-86986980 | None:intergenic |
ACCAATTCAACACAAGCCAC+TGG | 0.599399 | 3.3:+86987687 | MS.gene02681:CDS |
TCTAGAAATTTGGACACAGA+AGG | 0.605086 | 3.3:+86987471 | MS.gene02681:CDS |
GATGTGAGGGAATCAATGGA+AGG | 0.606194 | 3.3:+86987018 | MS.gene02681:CDS |
TGCAAAGCCTGATGGTGAGA+TGG | 0.606948 | 3.3:+86987782 | MS.gene02681:CDS |
GGATATGTACTCTATTCCAA+AGG | 0.607721 | 3.3:+86987563 | MS.gene02681:CDS |
ATTGGCAAGAAATTGAGGAT+AGG | 0.608269 | 3.3:+86987603 | MS.gene02681:CDS |
GAAATTTGATGCGGTAGTGG+GGG | 0.623597 | 3.3:+86987963 | MS.gene02681:intron |
AAAATAGGGATGATGAGTCA+AGG | 0.626352 | 3.3:+86986940 | None:intergenic |
CACAGAATCTGGTGTGACAA+TGG | 0.627498 | 3.3:+86988038 | MS.gene02681:CDS |
TAACTTGGCAAGATTTGTGG+TGG | 0.641212 | 3.3:+86988785 | MS.gene02681:CDS |
ACCCAAAGATCCCATGTGAG+TGG | 0.641569 | 3.3:-86988111 | None:intergenic |
AGAATAAACAATGATTTCAG+GGG | 0.643917 | 3.3:+86988189 | MS.gene02681:CDS |
GTGCCAATCTGATGAGAGAG+TGG | 0.645474 | 3.3:-86988213 | None:intergenic |
GATATCAATGCAGAAGCCAG+TGG | 0.660734 | 3.3:-86987703 | None:intergenic |
TATGTTTGGATAGTAACCGA+TGG | 0.661801 | 3.3:+86986964 | MS.gene02681:CDS |
ATATAACAATCACTGCAAGT+AGG | 0.665993 | 3.3:+86987986 | MS.gene02681:CDS |
TGGGTCAATCATATGGCCAG+GGG | 0.674510 | 3.3:+86987542 | MS.gene02681:CDS |
TTGATCGCTCAACTTTACGA+CGG | 0.681279 | 3.3:+86987822 | MS.gene02681:CDS |
GGATTGACAGAAATTTGATG+CGG | 0.685801 | 3.3:+86987954 | MS.gene02681:intron |
GATCGCTCAACTTTACGACG+GGG | 0.742491 | 3.3:+86987824 | MS.gene02681:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAGAATGAAAAAAATTATTT+TGG | + | chr3.3:86987933-86987952 | MS.gene02681:intron | 10.0% |
!!! | AATTAAGATTTTATTCATAT+AGG | + | chr3.3:86988324-86988343 | MS.gene02681:intron | 10.0% |
!!! | TAAATTAAATTTGTTCAAGT+TGG | + | chr3.3:86988516-86988535 | MS.gene02681:intron | 15.0% |
!!! | TTTTTTCATTCTTTTCATTT+TGG | - | chr3.3:86987926-86987945 | None:intergenic | 15.0% |
!! | AGATATTATATGAAAAGAAG+AGG | - | chr3.3:86987853-86987872 | None:intergenic | 20.0% |
!! | ATAGAATAAACAATGATTTC+AGG | + | chr3.3:86988187-86988206 | MS.gene02681:CDS | 20.0% |
!! | CATAACAGTTACATTATTAA+GGG | + | chr3.3:86988381-86988400 | MS.gene02681:intron | 20.0% |
!! | GAATCATTAACATATATAAC+AGG | - | chr3.3:86987879-86987898 | None:intergenic | 20.0% |
!! | GTGTAAAAACTTTAAACTTT+CGG | - | chr3.3:86988350-86988369 | None:intergenic | 20.0% |
!! | TAGAATAAACAATGATTTCA+GGG | + | chr3.3:86988188-86988207 | MS.gene02681:CDS | 20.0% |
!! | TATGAGATAATTAATGTGAT+TGG | + | chr3.3:86987402-86987421 | MS.gene02681:CDS | 20.0% |
!! | TCATAACAGTTACATTATTA+AGG | + | chr3.3:86988380-86988399 | MS.gene02681:intron | 20.0% |
!! | TGTTATTATTATTGCCTATT+AGG | - | chr3.3:86987497-86987516 | None:intergenic | 20.0% |
!!! | ATACCAAACTTTTCAAAATT+AGG | - | chr3.3:86987279-86987298 | None:intergenic | 20.0% |
!!! | ATTTGAACATTTTTGGAATA+TGG | + | chr3.3:86987148-86987167 | MS.gene02681:CDS | 20.0% |
!!! | TAGTTAAATCCATTTTTAAC+TGG | - | chr3.3:86987633-86987652 | None:intergenic | 20.0% |
!!! | TGTAATGAGCTTTTTATAAA+AGG | + | chr3.3:86989029-86989048 | MS.gene02681:CDS | 20.0% |
!!! | TTGAACAAATTTAATTTACG+TGG | - | chr3.3:86988514-86988533 | None:intergenic | 20.0% |
!!! | TTTATAAAAGGAAGTGTAAA+TGG | + | chr3.3:86989041-86989060 | MS.gene02681:CDS | 20.0% |
!!! | TTTGAACATTTTTGGAATAT+GGG | + | chr3.3:86987149-86987168 | MS.gene02681:CDS | 20.0% |
!!! | TTTTGTTTATGGAATTTTGA+AGG | + | chr3.3:86988956-86988975 | MS.gene02681:CDS | 20.0% |
! | AAACTACTTAATCATTGCAA+AGG | + | chr3.3:86988449-86988468 | MS.gene02681:intron | 25.0% |
! | AACCTAGAAAATATACTTCA+AGG | + | chr3.3:86988634-86988653 | MS.gene02681:intron | 25.0% |
! | AAGTTTGGTATTTCACAAAA+TGG | + | chr3.3:86987288-86987307 | MS.gene02681:CDS | 25.0% |
! | ACTCTCATTGTAATCAAATT+TGG | - | chr3.3:86987232-86987251 | None:intergenic | 25.0% |
! | AGAATAAACAATGATTTCAG+GGG | + | chr3.3:86988189-86988208 | MS.gene02681:CDS | 25.0% |
! | ATAATTAATGTGATTGGTGA+TGG | + | chr3.3:86987408-86987427 | MS.gene02681:CDS | 25.0% |
! | CATTGTTTATTCTATGTTCA+AGG | - | chr3.3:86988182-86988201 | None:intergenic | 25.0% |
! | CTAAAGAATAAGATGAATGT+CGG | + | chr3.3:86988918-86988937 | MS.gene02681:CDS | 25.0% |
! | TAACTGTTATGATTGAATGA+CGG | - | chr3.3:86988372-86988391 | None:intergenic | 25.0% |
! | TAATGCGTTTAAATATGCTT+TGG | - | chr3.3:86988708-86988727 | None:intergenic | 25.0% |
! | TTGTCAAACACTAGATTTAA+TGG | + | chr3.3:86987330-86987349 | MS.gene02681:CDS | 25.0% |
!! | GACACAAATTTGAACATTTT+TGG | + | chr3.3:86987141-86987160 | MS.gene02681:CDS | 25.0% |
!! | TCATCTTATTCTTTAGAAGT+TGG | - | chr3.3:86988914-86988933 | None:intergenic | 25.0% |
!! | TTTTAGTCCTTACATAACAT+GGG | + | chr3.3:86988571-86988590 | MS.gene02681:intron | 25.0% |
!!! | AGCAAAAAGACATTTTTTAC+TGG | + | chr3.3:86988676-86988695 | MS.gene02681:intron | 25.0% |
!!! | ATGCCTAATTTTGAAAAGTT+TGG | + | chr3.3:86987273-86987292 | MS.gene02681:CDS | 25.0% |
!!! | ATTTTAGTCCTTACATAACA+TGG | + | chr3.3:86988570-86988589 | MS.gene02681:intron | 25.0% |
!!! | CTAGTTCTAAAAATGATCTT+GGG | + | chr3.3:86987523-86987542 | MS.gene02681:CDS | 25.0% |
!!! | TAGATGATTTTAGAGTTAGA+TGG | + | chr3.3:86987082-86987101 | MS.gene02681:CDS | 25.0% |
!!! | TAGTATCTCATTTTAATGAC+AGG | + | chr3.3:86988747-86988766 | MS.gene02681:intron | 25.0% |
!!! | TCTAGTTCTAAAAATGATCT+TGG | + | chr3.3:86987522-86987541 | MS.gene02681:CDS | 25.0% |
AAATTTGTGTCAACAAGTGT+TGG | - | chr3.3:86987132-86987151 | None:intergenic | 30.0% | |
ATAGGAGTTCCAGTTAAAAA+TGG | + | chr3.3:86987621-86987640 | MS.gene02681:CDS | 30.0% | |
ATATAACAATCACTGCAAGT+AGG | + | chr3.3:86987986-86988005 | MS.gene02681:CDS | 30.0% | |
CGTTTAAATATGCTTTGGTT+TGG | - | chr3.3:86988703-86988722 | None:intergenic | 30.0% | |
GAATAAATTAGCCATACCAT+CGG | - | chr3.3:86986983-86987002 | None:intergenic | 30.0% | |
GATATGTACTCTATTCCAAA+GGG | + | chr3.3:86987564-86987583 | MS.gene02681:CDS | 30.0% | |
TAAAGGGCTATCTAGAAATT+TGG | + | chr3.3:86987461-86987480 | MS.gene02681:CDS | 30.0% | |
TACTTCAAGGACTAAACATA+AGG | + | chr3.3:86988647-86988666 | MS.gene02681:intron | 30.0% | |
TAGTTGTTCAAAGTATGTCA+TGG | + | chr3.3:86989121-86989140 | MS.gene02681:CDS | 30.0% | |
TTGTTTCAATGAAAGACAAC+AGG | + | chr3.3:86988061-86988080 | MS.gene02681:CDS | 30.0% | |
TTTCTAGATAGCCCTTTATT+TGG | - | chr3.3:86987459-86987478 | None:intergenic | 30.0% | |
! | ACTAGATTTAATGGTCTTAG+TGG | + | chr3.3:86987339-86987358 | MS.gene02681:CDS | 30.0% |
! | ATAAAAGGAAGTGTAAATGG+TGG | + | chr3.3:86989044-86989063 | MS.gene02681:CDS | 30.0% |
! | GATTTTGGACACCAAATAAA+GGG | + | chr3.3:86987445-86987464 | MS.gene02681:CDS | 30.0% |
! | GTCCTTGAAGTATATTTTCT+AGG | - | chr3.3:86988639-86988658 | None:intergenic | 30.0% |
! | GTTGAACCAAGATTTAAAAC+TGG | + | chr3.3:86989143-86989162 | MS.gene02681:CDS | 30.0% |
! | TCATCTAGTTTCTTTGTTCT+AGG | - | chr3.3:86987069-86987088 | None:intergenic | 30.0% |
! | TTTTAGTCCCATGTTATGTA+AGG | - | chr3.3:86988581-86988600 | None:intergenic | 30.0% |
!! | ATTCATTGAGTTTTGATGTG+AGG | + | chr3.3:86987004-86987023 | MS.gene02681:CDS | 30.0% |
!! | CCAAGAAAGTGCTTAATATA+GGG | - | chr3.3:86989095-86989114 | None:intergenic | 30.0% |
!! | CTCAAAGGTTCTTTTGTTTA+TGG | + | chr3.3:86988945-86988964 | MS.gene02681:CDS | 30.0% |
!! | GTTCATTGGATTTGTTGTTT+GGG | + | chr3.3:86988155-86988174 | MS.gene02681:CDS | 30.0% |
!! | TATGGAATTTTGAAGGACTT+GGG | + | chr3.3:86988963-86988982 | MS.gene02681:CDS | 30.0% |
!! | TCCAAGAAAGTGCTTAATAT+AGG | - | chr3.3:86989096-86989115 | None:intergenic | 30.0% |
!! | TGTTCATTGGATTTGTTGTT+TGG | + | chr3.3:86988154-86988173 | MS.gene02681:CDS | 30.0% |
!! | TTATGGAATTTTGAAGGACT+TGG | + | chr3.3:86988962-86988981 | MS.gene02681:CDS | 30.0% |
!! | TTCATTGAGTTTTGATGTGA+GGG | + | chr3.3:86987005-86987024 | MS.gene02681:CDS | 30.0% |
AAGATTTGTGGTGGTTGTAT+GGG | + | chr3.3:86988794-86988813 | MS.gene02681:CDS | 35.0% | |
AAGTCATATGGTAAGGCATA+AGG | - | chr3.3:86987753-86987772 | None:intergenic | 35.0% | |
ACAACAGGAAGAAAAATGCA+TGG | + | chr3.3:86988076-86988095 | MS.gene02681:CDS | 35.0% | |
AGAGAAAGTAGTGAGTAACT+TGG | + | chr3.3:86988770-86988789 | MS.gene02681:CDS | 35.0% | |
ATGATCTTGGGTCAATCATA+TGG | + | chr3.3:86987535-86987554 | MS.gene02681:CDS | 35.0% | |
ATTGGCAAGAAATTGAGGAT+AGG | + | chr3.3:86987603-86987622 | MS.gene02681:CDS | 35.0% | |
CAACAGGAAGAAAAATGCAT+GGG | + | chr3.3:86988077-86988096 | MS.gene02681:CDS | 35.0% | |
CCCTATATTAAGCACTTTCT+TGG | + | chr3.3:86989092-86989111 | MS.gene02681:CDS | 35.0% | |
CGAATGTTCTACATACTACA+TGG | + | chr3.3:86988602-86988621 | MS.gene02681:intron | 35.0% | |
CTACTATTGGCAAGAAATTG+AGG | + | chr3.3:86987598-86987617 | MS.gene02681:CDS | 35.0% | |
CTCAATTTCTTGCCAATAGT+AGG | - | chr3.3:86987600-86987619 | None:intergenic | 35.0% | |
GCAAATCGAACAAAGTCATA+TGG | - | chr3.3:86987765-86987784 | None:intergenic | 35.0% | |
GCATGTTCATTTGTGTTCAT+TGG | + | chr3.3:86988141-86988160 | MS.gene02681:CDS | 35.0% | |
GCTATTGAGAAAGTTGGAAT+TGG | + | chr3.3:86987201-86987220 | MS.gene02681:CDS | 35.0% | |
GGATATGTACTCTATTCCAA+AGG | + | chr3.3:86987563-86987582 | MS.gene02681:CDS | 35.0% | |
GGATTGACAGAAATTTGATG+CGG | + | chr3.3:86987954-86987973 | MS.gene02681:intron | 35.0% | |
TATGTTTGGATAGTAACCGA+TGG | + | chr3.3:86986964-86986983 | MS.gene02681:CDS | 35.0% | |
TCGAACAAAGTCATATGGTA+AGG | - | chr3.3:86987760-86987779 | None:intergenic | 35.0% | |
TCTAGAAATTTGGACACAGA+AGG | + | chr3.3:86987471-86987490 | MS.gene02681:CDS | 35.0% | |
TCTTGACAGTTGAACAACTA+AGG | + | chr3.3:86988868-86988887 | MS.gene02681:CDS | 35.0% | |
TGCTACAATTGCATTAGCAA+TGG | + | chr3.3:86987179-86987198 | MS.gene02681:CDS | 35.0% | |
! | AGATTTAAAACTGGTGGCTT+TGG | + | chr3.3:86989152-86989171 | MS.gene02681:CDS | 35.0% |
! | ATGGTTTTCCTTCTCAACTA+TGG | + | chr3.3:86988242-86988261 | MS.gene02681:CDS | 35.0% |
! | GAACCAAGATTTAAAACTGG+TGG | + | chr3.3:86989146-86989165 | MS.gene02681:CDS | 35.0% |
! | GGATTTTGGACACCAAATAA+AGG | + | chr3.3:86987444-86987463 | MS.gene02681:CDS | 35.0% |
! | GTGAAAAGAGAGTTGGATTT+TGG | + | chr3.3:86987430-86987449 | MS.gene02681:CDS | 35.0% |
! | TTTTGATGTGAGGGAATCAA+TGG | + | chr3.3:86987014-86987033 | MS.gene02681:CDS | 35.0% |
!! | AGTGGTGATTTTGATGTTGT+TGG | + | chr3.3:86987357-86987376 | MS.gene02681:CDS | 35.0% |
!! | GTGATTTTGATGTTGTTGGT+GGG | + | chr3.3:86987361-86987380 | MS.gene02681:CDS | 35.0% |
!!! | AAGCCACCAGTTTTAAATCT+TGG | - | chr3.3:86989152-86989171 | None:intergenic | 35.0% |
ACAATGCCATACACAGAATC+TGG | + | chr3.3:86988027-86988046 | MS.gene02681:CDS | 40.0% | |
ACAGAAATTTGATGCGGTAG+TGG | + | chr3.3:86987960-86987979 | MS.gene02681:intron | 40.0% | |
AGAAATTTGATGCGGTAGTG+GGG | + | chr3.3:86987962-86987981 | MS.gene02681:intron | 40.0% | |
AGCATAGACCATAGTTGAGA+AGG | - | chr3.3:86988253-86988272 | None:intergenic | 40.0% | |
ATCAGATTGGCACAAGCTTA+TGG | + | chr3.3:86988223-86988242 | MS.gene02681:CDS | 40.0% | |
CAAGATTTGTGGTGGTTGTA+TGG | + | chr3.3:86988793-86988812 | MS.gene02681:CDS | 40.0% | |
CAGAAATTTGATGCGGTAGT+GGG | + | chr3.3:86987961-86987980 | MS.gene02681:intron | 40.0% | |
GAGTAACTTGGCAAGATTTG+TGG | + | chr3.3:86988782-86988801 | MS.gene02681:CDS | 40.0% | |
GCAATGGCTATTGAGAAAGT+TGG | + | chr3.3:86987195-86987214 | MS.gene02681:CDS | 40.0% | |
GCTTGTGTTGAATTGGTACT+AGG | - | chr3.3:86987684-86987703 | None:intergenic | 40.0% | |
GGATGGGAAATTCCTACTAT+TGG | + | chr3.3:86987585-86987604 | MS.gene02681:CDS | 40.0% | |
GTACTCTATTCCAAAGGGAT+GGG | + | chr3.3:86987569-86987588 | MS.gene02681:CDS | 40.0% | |
TAACTTGGCAAGATTTGTGG+TGG | + | chr3.3:86988785-86988804 | MS.gene02681:CDS | 40.0% | |
TGATGAGTCAAGGCTATGTT+TGG | + | chr3.3:86986950-86986969 | MS.gene02681:CDS | 40.0% | |
TGTACTCTATTCCAAAGGGA+TGG | + | chr3.3:86987568-86987587 | MS.gene02681:CDS | 40.0% | |
TTGAGCGATCAACTCATTGT+AGG | - | chr3.3:86987814-86987833 | None:intergenic | 40.0% | |
TTGATCGCTCAACTTTACGA+CGG | + | chr3.3:86987822-86987841 | MS.gene02681:CDS | 40.0% | |
TTGGATAGTAACCGATGGTA+TGG | + | chr3.3:86986969-86986988 | MS.gene02681:CDS | 40.0% | |
! | ATGAATGTCGGCTATCTCAA+AGG | + | chr3.3:86988930-86988949 | MS.gene02681:CDS | 40.0% |
!! | GAATCAATGGAAGGAGTGTT+GGG | + | chr3.3:86987027-86987046 | MS.gene02681:CDS | 40.0% |
!! | GGTGATTTTGATGTTGTTGG+TGG | + | chr3.3:86987360-86987379 | MS.gene02681:CDS | 40.0% |
!!! | CTTTTTGAAGCCACTCACAT+GGG | + | chr3.3:86988101-86988120 | MS.gene02681:CDS | 40.0% |
ACCAATTCAACACAAGCCAC+TGG | + | chr3.3:86987687-86987706 | MS.gene02681:CDS | 45.0% | |
CACAGAATCTGGTGTGACAA+TGG | + | chr3.3:86988038-86988057 | MS.gene02681:CDS | 45.0% | |
CCATGTGAGTGGCTTCAAAA+AGG | - | chr3.3:86988103-86988122 | None:intergenic | 45.0% | |
GATATCAATGCAGAAGCCAG+TGG | - | chr3.3:86987706-86987725 | None:intergenic | 45.0% | |
GATGTGAGGGAATCAATGGA+AGG | + | chr3.3:86987018-86987037 | MS.gene02681:CDS | 45.0% | |
GGAATAGAGTACATATCCCC+TGG | - | chr3.3:86987561-86987580 | None:intergenic | 45.0% | |
GTAGGAATTTCCCATCCCTT+TGG | - | chr3.3:86987582-86987601 | None:intergenic | 45.0% | |
GTCACACCAGATTCTGTGTA+TGG | - | chr3.3:86988036-86988055 | None:intergenic | 45.0% | |
TGATCGCTCAACTTTACGAC+GGG | + | chr3.3:86987823-86987842 | MS.gene02681:CDS | 45.0% | |
TGGTGTACGTCTGTAATAGC+TGG | - | chr3.3:86988894-86988913 | None:intergenic | 45.0% | |
TTGGACACAGAAGGCCTAAT+AGG | + | chr3.3:86987480-86987499 | MS.gene02681:CDS | 45.0% | |
TTGGGTCAATCATATGGCCA+GGG | + | chr3.3:86987541-86987560 | MS.gene02681:CDS | 45.0% | |
! | GAAATTTGATGCGGTAGTGG+GGG | + | chr3.3:86987963-86987982 | MS.gene02681:intron | 45.0% |
! | GGAATCAATGGAAGGAGTGT+TGG | + | chr3.3:86987026-86987045 | MS.gene02681:CDS | 45.0% |
! | GGTGATGGTGAAAAGAGAGT+TGG | + | chr3.3:86987423-86987442 | MS.gene02681:CDS | 45.0% |
! | GGTGGTTGTATGGGTTTTTG+TGG | + | chr3.3:86988803-86988822 | MS.gene02681:CDS | 45.0% |
! | GTTCGATTTGCAAAGCCTGA+TGG | + | chr3.3:86987774-86987793 | MS.gene02681:CDS | 45.0% |
!!! | CCTTTTTGAAGCCACTCACA+TGG | + | chr3.3:86988100-86988119 | MS.gene02681:CDS | 45.0% |
ACCCAAAGATCCCATGTGAG+TGG | - | chr3.3:86988114-86988133 | None:intergenic | 50.0% | |
AGCCACTCACATGGGATCTT+TGG | + | chr3.3:86988109-86988128 | MS.gene02681:CDS | 50.0% | |
CTTGGGTCAATCATATGGCC+AGG | + | chr3.3:86987540-86987559 | MS.gene02681:CDS | 50.0% | |
GATCGCTCAACTTTACGACG+GGG | + | chr3.3:86987824-86987843 | MS.gene02681:CDS | 50.0% | |
GCCACTCACATGGGATCTTT+GGG | + | chr3.3:86988110-86988129 | MS.gene02681:CDS | 50.0% | |
GGACCACTCTCTCATCAGAT+TGG | + | chr3.3:86988210-86988229 | MS.gene02681:CDS | 50.0% | |
GTGCCAATCTGATGAGAGAG+TGG | - | chr3.3:86988216-86988235 | None:intergenic | 50.0% | |
TGGGTCAATCATATGGCCAG+GGG | + | chr3.3:86987542-86987561 | MS.gene02681:CDS | 50.0% | |
! | GCCAGTGGCTTGTGTTGAAT+TGG | - | chr3.3:86987691-86987710 | None:intergenic | 50.0% |
! | TGCAAAGCCTGATGGTGAGA+TGG | + | chr3.3:86987782-86987801 | MS.gene02681:CDS | 50.0% |
!! | TGGAAGGAGTGTTGGGTGTT+AGG | + | chr3.3:86987034-86987053 | MS.gene02681:CDS | 50.0% |
GTTCCTGCCATCTCACCATC+AGG | - | chr3.3:86987792-86987811 | None:intergenic | 55.0% | |
! | AAGCCTGATGGTGAGATGGC+AGG | + | chr3.3:86987786-86987805 | MS.gene02681:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 86986949 | 86989214 | 86986949 | ID=MS.gene02681 |
chr3.3 | mRNA | 86986949 | 86989214 | 86986949 | ID=MS.gene02681.t1;Parent=MS.gene02681 |
chr3.3 | exon | 86986949 | 86987845 | 86986949 | ID=MS.gene02681.t1.exon1;Parent=MS.gene02681.t1 |
chr3.3 | CDS | 86986949 | 86987845 | 86986949 | ID=cds.MS.gene02681.t1;Parent=MS.gene02681.t1 |
chr3.3 | exon | 86987964 | 86988276 | 86987964 | ID=MS.gene02681.t1.exon2;Parent=MS.gene02681.t1 |
chr3.3 | CDS | 86987964 | 86988276 | 86987964 | ID=cds.MS.gene02681.t1;Parent=MS.gene02681.t1 |
chr3.3 | exon | 86988769 | 86989214 | 86988769 | ID=MS.gene02681.t1.exon3;Parent=MS.gene02681.t1 |
chr3.3 | CDS | 86988769 | 86989214 | 86988769 | ID=cds.MS.gene02681.t1;Parent=MS.gene02681.t1 |
Gene Sequence |
Protein sequence |