Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015265.t1 | RHN53916.1 | 97.6 | 541 | 6 | 2 | 3 | 537 | 59 | 598 | 3.70E-300 | 1040 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015265.t1 | B5X4Z4 | 69.5 | 531 | 140 | 3 | 21 | 529 | 80 | 610 | 3.4e-209 | 729.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015265.t1 | A0A396HKT9 | 97.6 | 541 | 6 | 2 | 3 | 537 | 59 | 598 | 2.7e-300 | 1040.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene015265.t1 | TR | GNAT |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene015265 | MS.gene071560 | PPI |
| MS.gene015265 | MS.gene43534 | PPI |
| MS.gene015265 | MS.gene09607 | PPI |
| MS.gene015265 | MS.gene20305 | PPI |
| MS.gene028619 | MS.gene015265 | PPI |
| MS.gene015265 | MS.gene30927 | PPI |
| MS.gene015265 | MS.gene31184 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015265.t1 | MTR_5g015300 | 95.652 | 552 | 6 | 2 | 3 | 537 | 59 | 609 | 0.0 | 1074 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015265.t1 | AT4G37670 | 69.030 | 536 | 144 | 3 | 16 | 529 | 75 | 610 | 0.0 | 756 |
| MS.gene015265.t1 | AT2G22910 | 68.880 | 527 | 144 | 3 | 23 | 529 | 75 | 601 | 0.0 | 740 |
| MS.gene015265.t1 | AT4G37670 | 68.615 | 462 | 123 | 3 | 21 | 460 | 80 | 541 | 0.0 | 640 |
Find 119 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGCTTGTGCCTTGGCAAT+TGG | 0.248266 | 5.4:+9012134 | MS.gene015265:CDS |
| ACAGTAATTCCACTCTTATT+TGG | 0.256128 | 5.4:-9014716 | None:intergenic |
| TCTCCTCAGGGTAAGGAAAA+AGG | 0.290072 | 5.4:-9013758 | None:intergenic |
| CAGCTTGTGCCTTGGCAATT+GGG | 0.298414 | 5.4:+9012135 | MS.gene015265:CDS |
| ATCCACTTTGTTATTGTTCC+TGG | 0.304270 | 5.4:+9010753 | MS.gene015265:CDS |
| GGTCCAATACTTGATGAAAA+TGG | 0.316810 | 5.4:+9012185 | MS.gene015265:CDS |
| GACAACATTCTCAAAGATAA+AGG | 0.329004 | 5.4:+9010792 | MS.gene015265:CDS |
| AGCGAGCAAGGCTTTGCTAT+TGG | 0.336026 | 5.4:+9012449 | MS.gene015265:CDS |
| TTAAAATTGTTATGCTCAAC+AGG | 0.336039 | 5.4:-9012323 | None:intergenic |
| TGAAATATGTGCAGATTATA+TGG | 0.338432 | 5.4:+9014346 | MS.gene015265:intron |
| CAAACAACTTATTCAGCCTT+TGG | 0.343314 | 5.4:+9013521 | MS.gene015265:CDS |
| TTGGAATTGTTTACAAGAGA+TGG | 0.378945 | 5.4:+9012897 | MS.gene015265:CDS |
| TTCGTTCCCTTCGTGAAGCT+TGG | 0.379069 | 5.4:+9010330 | MS.gene015265:CDS |
| AGCTGCTATTTCACTTTGCT+CGG | 0.382328 | 5.4:-9012264 | None:intergenic |
| TTGTTGGATGGCACTATTAG+TGG | 0.387463 | 5.4:+9012864 | MS.gene015265:CDS |
| GCAGTCAAATCTCCACCTAA+TGG | 0.388073 | 5.4:+9012350 | MS.gene015265:CDS |
| TGCCCTTGGCCACGGCAATC+AGG | 0.388955 | 5.4:-9013813 | None:intergenic |
| GGAATTGATTATGGGTCAAC+TGG | 0.390661 | 5.4:+9011710 | MS.gene015265:CDS |
| CATATAATACTTAGAATTGC+GGG | 0.398277 | 5.4:-9014681 | None:intergenic |
| TTTGAGAATGGAGATGGCTT+AGG | 0.403018 | 5.4:+9012422 | MS.gene015265:CDS |
| TCTCCTGATTGCCGTGGCCA+AGG | 0.403628 | 5.4:+9013810 | MS.gene015265:CDS |
| TTTGGAGGCATGTGGCATAC+TGG | 0.410523 | 5.4:+9013539 | MS.gene015265:CDS |
| TGATTGCCGTGGCCAAGGGC+AGG | 0.426100 | 5.4:+9013815 | MS.gene015265:CDS |
| GCAATTTGTCTCCCTGCCCT+TGG | 0.430775 | 5.4:-9013827 | None:intergenic |
| ACCTCTGCACACTTCTCCTC+AGG | 0.437888 | 5.4:-9013771 | None:intergenic |
| GTGGTCGGTGGAATTGATTA+TGG | 0.441744 | 5.4:+9011701 | MS.gene015265:CDS |
| GTTGGATAATTTCGTTGTTG+TGG | 0.449871 | 5.4:+9013704 | MS.gene015265:CDS |
| TTCTTTCTCCAGCACCTATG+AGG | 0.453361 | 5.4:+9012106 | MS.gene015265:intron |
| TCAATTTGCACATGGGTGCC+AGG | 0.453790 | 5.4:-9010771 | None:intergenic |
| ACAAGCTGTTGCAACCTCAT+AGG | 0.454255 | 5.4:-9012120 | None:intergenic |
| ATGTCTACGAATATTGCATA+TGG | 0.454955 | 5.4:-9011485 | None:intergenic |
| ATTCAATACTTCACCAGAGC+TGG | 0.458082 | 5.4:-9011816 | None:intergenic |
| GAACGTCTAAGTCGAATGAA+TGG | 0.458588 | 5.4:+9012479 | MS.gene015265:CDS |
| GTGAAAGCGGTTGAGGAAGA+AGG | 0.459644 | 5.4:+9012293 | MS.gene015265:CDS |
| CGCATGCGTGAGAGACTTGA+TGG | 0.466167 | 5.4:+9011758 | MS.gene015265:CDS |
| GAGAAGAAAGCAGCATCTCT+TGG | 0.466675 | 5.4:+9014368 | MS.gene015265:CDS |
| GGTTCAAAGAGTTCACTTGT+TGG | 0.467382 | 5.4:+9012848 | MS.gene015265:CDS |
| TTGAGAATGGAGATGGCTTA+GGG | 0.472572 | 5.4:+9012423 | MS.gene015265:CDS |
| CTCCTGATTGCCGTGGCCAA+GGG | 0.475621 | 5.4:+9013811 | MS.gene015265:CDS |
| GGAGCAAGGCTAAGTATGTT+GGG | 0.485838 | 5.4:+9011365 | MS.gene015265:CDS |
| TAACTATGTGAAAGCGGTTG+AGG | 0.486501 | 5.4:+9012286 | MS.gene015265:CDS |
| AAGAGTGGAATTACTGTTGG+TGG | 0.488225 | 5.4:+9014722 | MS.gene015265:CDS |
| GAATGGGTACCTGTCAGAAT+TGG | 0.488645 | 5.4:+9012496 | MS.gene015265:CDS |
| GGGAGCAAGGCTAAGTATGT+TGG | 0.490609 | 5.4:+9011364 | MS.gene015265:intron |
| TGGTAACTTTCTTGCAGCCA+AGG | 0.491225 | 5.4:+9011552 | MS.gene015265:CDS |
| AGCTTGTGCCTTGGCAATTG+GGG | 0.494564 | 5.4:+9012136 | MS.gene015265:CDS |
| CAAGAGGCAAGAAACGAATC+AGG | 0.494769 | 5.4:-9012211 | None:intergenic |
| GCACACTTCTCCTCAGGGTA+AGG | 0.495453 | 5.4:-9013765 | None:intergenic |
| AACGCTGCAATGTGTGCAGC+AGG | 0.498191 | 5.4:+9011418 | MS.gene015265:CDS |
| AAGTTAATATGCGTTATAGA+TGG | 0.498769 | 5.4:+9012164 | MS.gene015265:CDS |
| CAAAGAGTTCACTTGTTGGA+TGG | 0.500446 | 5.4:+9012852 | MS.gene015265:CDS |
| ACAACTTATTCAGCCTTTGG+AGG | 0.501598 | 5.4:+9013524 | MS.gene015265:CDS |
| CTACGATAAGCGAGAAGATA+AGG | 0.502922 | 5.4:-9010353 | None:intergenic |
| AACATGTCTGCTTCTTCAAG+AGG | 0.505053 | 5.4:-9012227 | None:intergenic |
| ATTGTTTACAAGAGATGGGA+TGG | 0.511266 | 5.4:+9012902 | MS.gene015265:CDS |
| TGTCTCCCTGCCCTTGGCCA+CGG | 0.513144 | 5.4:-9013821 | None:intergenic |
| AACGTCTAAGTCGAATGAAT+GGG | 0.522685 | 5.4:+9012480 | MS.gene015265:CDS |
| TGGAATTGTTTACAAGAGAT+GGG | 0.523017 | 5.4:+9012898 | MS.gene015265:CDS |
| AACTTGGGCTACTCCAGCTC+TGG | 0.523097 | 5.4:+9011803 | MS.gene015265:CDS |
| CTGCTGTACGTGTTGTAAGT+AGG | 0.526017 | 5.4:-9014406 | None:intergenic |
| GGATGGGAACAATGGTGGCT+AGG | 0.526598 | 5.4:+9012919 | MS.gene015265:CDS |
| TTCGTTGTTGTGGAAAGAGA+AGG | 0.528576 | 5.4:+9013714 | MS.gene015265:CDS |
| GAGCAAGGCTTTGCTATTGG+AGG | 0.529772 | 5.4:+9012452 | MS.gene015265:CDS |
| TGGTCGGTGGAATTGATTAT+GGG | 0.530856 | 5.4:+9011702 | MS.gene015265:CDS |
| CTGCAGCAGCCAATTCTGAC+AGG | 0.535179 | 5.4:-9012505 | None:intergenic |
| GATTGCCGTGGCCAAGGGCA+GGG | 0.536027 | 5.4:+9013816 | MS.gene015265:CDS |
| CTTGACAGGTTTGTGAGGCG+TGG | 0.536755 | 5.4:+9014599 | MS.gene015265:intron |
| ATAGCAGCTAAACTTTCAGT+TGG | 0.541876 | 5.4:+9011457 | MS.gene015265:CDS |
| GCAACTTTCCACAATGGTGT+TGG | 0.543734 | 5.4:+9012398 | MS.gene015265:CDS |
| TCATATAATACTTAGAATTG+CGG | 0.547939 | 5.4:-9014682 | None:intergenic |
| TTTATAGCTGCTACAAACGT+TGG | 0.550580 | 5.4:+9013686 | MS.gene015265:intron |
| GGCTTAGGGACTAGCGAGCA+AGG | 0.560101 | 5.4:+9012437 | MS.gene015265:CDS |
| TTACAACACGTACAGCAGAT+TGG | 0.561074 | 5.4:+9014411 | MS.gene015265:CDS |
| CAATAACAAAGTGGATTCCA+AGG | 0.563812 | 5.4:-9010746 | None:intergenic |
| GGGCAGGGAGACAAATTGCT+TGG | 0.563989 | 5.4:+9013831 | MS.gene015265:CDS |
| GTGAACGGAATCACTGAAGA+AGG | 0.566221 | 5.4:+9010287 | MS.gene015265:CDS |
| AGAAATGACGAGAACAAAAG+TGG | 0.566415 | 5.4:-9010378 | None:intergenic |
| ATGGAAAACGCATTACAGAA+TGG | 0.566481 | 5.4:+9012369 | MS.gene015265:CDS |
| TTGTGCCTTGGCAATTGGGG+CGG | 0.568264 | 5.4:+9012139 | MS.gene015265:CDS |
| AACTTCTTGACAGGTTTGTG+AGG | 0.570293 | 5.4:+9014594 | MS.gene015265:intron |
| AGACATGTTAATTCGCAAGC+GGG | 0.573614 | 5.4:+9012241 | MS.gene015265:CDS |
| GAATTGATTATGGGTCAACT+GGG | 0.574055 | 5.4:+9011711 | MS.gene015265:CDS |
| GGTTAAGCGGTCTGATGAAG+AGG | 0.575532 | 5.4:+9013560 | MS.gene015265:CDS |
| TTGAACAACGAAGGAGTGAA+CGG | 0.576908 | 5.4:+9010272 | MS.gene015265:CDS |
| CAGAGAAGAGGGGTGGTCGG+TGG | 0.577629 | 5.4:+9011689 | MS.gene015265:intron |
| AGCAGCTAACTATGTGAAAG+CGG | 0.584271 | 5.4:+9012280 | MS.gene015265:CDS |
| AATAAGAGTGGAATTACTGT+TGG | 0.587427 | 5.4:+9014719 | MS.gene015265:CDS |
| CTTGTCCGCCCCAATTGCCA+AGG | 0.592760 | 5.4:-9012144 | None:intergenic |
| TGACAGAGAAGAGGGGTGGT+CGG | 0.595410 | 5.4:+9011686 | MS.gene015265:intron |
| ATTCAGCCTTTGGAGGCATG+TGG | 0.604861 | 5.4:+9013531 | MS.gene015265:CDS |
| ATATGCAATATTCGTAGACA+TGG | 0.605536 | 5.4:+9011487 | MS.gene015265:CDS |
| GGTTGCAACAGCTTGTGCCT+TGG | 0.608428 | 5.4:+9012127 | MS.gene015265:CDS |
| CTACGAATATTGCATATGGA+AGG | 0.610959 | 5.4:-9011481 | None:intergenic |
| GCAGTTTCTCCTGATTGCCG+TGG | 0.611169 | 5.4:+9013804 | MS.gene015265:CDS |
| AAGAGATGGGATGGGAACAA+TGG | 0.612647 | 5.4:+9012911 | MS.gene015265:CDS |
| TTGTTTACAAGAGATGGGAT+GGG | 0.612686 | 5.4:+9012903 | MS.gene015265:CDS |
| CGCAATGCGTTGAACAACGA+AGG | 0.616719 | 5.4:+9010263 | MS.gene015265:CDS |
| TACTGCGTTTACAGGGAGCA+AGG | 0.617201 | 5.4:+9011351 | MS.gene015265:intron |
| TCTCAAAACCAACACCATTG+TGG | 0.620130 | 5.4:-9012406 | None:intergenic |
| AAGCTTCTACCAAATAAGAG+TGG | 0.625840 | 5.4:+9014707 | MS.gene015265:CDS |
| AGATGGGATGGGAACAATGG+TGG | 0.628080 | 5.4:+9012914 | MS.gene015265:CDS |
| GAATGTTGTCAATTTGCACA+TGG | 0.630324 | 5.4:-9010779 | None:intergenic |
| GATAAGGCCAAGCTTCACGA+AGG | 0.630575 | 5.4:-9010337 | None:intergenic |
| AGAGCTGGAGTAGCCCAAGT+TGG | 0.630783 | 5.4:-9011801 | None:intergenic |
| AGTATGCCACATGCCTCCAA+AGG | 0.632526 | 5.4:-9013537 | None:intergenic |
| CATGTGGCATACTGGTTAAG+CGG | 0.633218 | 5.4:+9013547 | MS.gene015265:CDS |
| CAGACATGTTAATTCGCAAG+CGG | 0.635149 | 5.4:+9012240 | MS.gene015265:CDS |
| GAAGGTCAAATAATTGCATG+TGG | 0.638311 | 5.4:+9013732 | MS.gene015265:CDS |
| CCTCTGCACACTTCTCCTCA+GGG | 0.642147 | 5.4:-9013770 | None:intergenic |
| GCTGCAATGTGTGCAGCAGG+AGG | 0.644204 | 5.4:+9011421 | MS.gene015265:CDS |
| CCCTGAGGAGAAGTGTGCAG+AGG | 0.655036 | 5.4:+9013770 | MS.gene015265:CDS |
| GGTCAAATAATTGCATGTGG+TGG | 0.656987 | 5.4:+9013735 | MS.gene015265:CDS |
| GTTAGTGTCAGTGTTACAAG+TGG | 0.659841 | 5.4:+9011532 | MS.gene015265:CDS |
| TGCCAGGAACAATAACAAAG+TGG | 0.667425 | 5.4:-9010755 | None:intergenic |
| CATAATGCAACTTTCCACAA+TGG | 0.674650 | 5.4:+9012392 | MS.gene015265:CDS |
| ATAAGGCCAAGCTTCACGAA+GGG | 0.694309 | 5.4:-9010336 | None:intergenic |
| AATGTTGTCAATTTGCACAT+GGG | 0.704234 | 5.4:-9010778 | None:intergenic |
| AATTGATTATGGGTCAACTG+GGG | 0.744930 | 5.4:+9011712 | MS.gene015265:CDS |
| ATGCGTGAGAGACTTGATGG+TGG | 0.746452 | 5.4:+9011761 | MS.gene015265:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATTATATTAAAAAGATG+TGG | - | chr5.4:9014322-9014341 | None:intergenic | 10.0% |
| !! | ATTAAAACAATAAAAGCAAA+AGG | - | chr5.4:9010630-9010649 | None:intergenic | 15.0% |
| !! | GAAAATTAAAAGATATAACA+TGG | - | chr5.4:9012551-9012570 | None:intergenic | 15.0% |
| !! | TTGAAATTATTTGTAAATGA+TGG | + | chr5.4:9013874-9013893 | MS.gene015265:intron | 15.0% |
| !!! | AATAATTTGTTCTATGTATT+GGG | + | chr5.4:9013913-9013932 | MS.gene015265:intron | 15.0% |
| !!! | TAATAATTTGTTCTATGTAT+TGG | + | chr5.4:9013912-9013931 | MS.gene015265:intron | 15.0% |
| !! | AATAAACTGAAAAAAGCTTA+TGG | - | chr5.4:9010958-9010977 | None:intergenic | 20.0% |
| !! | AATTAGAATGAATTCAATTC+TGG | - | chr5.4:9010513-9010532 | None:intergenic | 20.0% |
| !! | CAAAGAAGTGATTATATTTA+GGG | + | chr5.4:9011154-9011173 | MS.gene015265:intron | 20.0% |
| !! | TCAAAGAAGTGATTATATTT+AGG | + | chr5.4:9011153-9011172 | MS.gene015265:intron | 20.0% |
| !! | TCATATAATACTTAGAATTG+CGG | - | chr5.4:9014685-9014704 | None:intergenic | 20.0% |
| !!! | AAGACAAGTTTTTTGTTTAA+AGG | + | chr5.4:9014501-9014520 | MS.gene015265:intron | 20.0% |
| !!! | AATTATTTGTAAATGATGGA+TGG | + | chr5.4:9013878-9013897 | MS.gene015265:intron | 20.0% |
| !!! | ATAGTTATTTTAACCAACTT+GGG | + | chr5.4:9011788-9011807 | MS.gene015265:CDS | 20.0% |
| !!! | ATTGTTTTCTTTTTCTTTTC+AGG | - | chr5.4:9014653-9014672 | None:intergenic | 20.0% |
| !!! | TATAGTTATTTTAACCAACT+TGG | + | chr5.4:9011787-9011806 | MS.gene015265:CDS | 20.0% |
| !!! | TGTATAATTTTAATCATCGA+AGG | + | chr5.4:9014274-9014293 | MS.gene015265:intron | 20.0% |
| !!! | TTCTAAACTTTTAAGTATGT+GGG | - | chr5.4:9013400-9013419 | None:intergenic | 20.0% |
| !!! | TTGCTATTTTCTTTTTTGTT+AGG | + | chr5.4:9010462-9010481 | MS.gene015265:intron | 20.0% |
| !!! | TTTCTAAACTTTTAAGTATG+TGG | - | chr5.4:9013401-9013420 | None:intergenic | 20.0% |
| ! | AAGTTAATATGCGTTATAGA+TGG | + | chr5.4:9012164-9012183 | MS.gene015265:CDS | 25.0% |
| ! | AATGTTTAGACAAATTACCA+CGG | - | chr5.4:9013644-9013663 | None:intergenic | 25.0% |
| ! | ACCTGAATTATGATTATGAA+AGG | + | chr5.4:9014055-9014074 | MS.gene015265:intron | 25.0% |
| ! | ATCAATATCAGACCAATAAT+AGG | + | chr5.4:9012648-9012667 | MS.gene015265:intron | 25.0% |
| ! | ATTAATTCACAAGACATGTT+TGG | + | chr5.4:9014085-9014104 | MS.gene015265:intron | 25.0% |
| ! | CATATAATACTTAGAATTGC+GGG | - | chr5.4:9014684-9014703 | None:intergenic | 25.0% |
| ! | TAAAAGCTAAAACAACTTCA+AGG | - | chr5.4:9013057-9013076 | None:intergenic | 25.0% |
| ! | TAACTAATGGTTTCTTGAAA+GGG | - | chr5.4:9013215-9013234 | None:intergenic | 25.0% |
| ! | TCAGTAGATAAGTTCAAATA+AGG | - | chr5.4:9010848-9010867 | None:intergenic | 25.0% |
| ! | TCCTTTCATAATCATAATTC+AGG | - | chr5.4:9014059-9014078 | None:intergenic | 25.0% |
| ! | TGAAATATGTGCAGATTATA+TGG | + | chr5.4:9014346-9014365 | MS.gene015265:intron | 25.0% |
| ! | TGAATCATAAAATCAAACCT+TGG | - | chr5.4:9011572-9011591 | None:intergenic | 25.0% |
| ! | TTAAAATTGTTATGCTCAAC+AGG | - | chr5.4:9012326-9012345 | None:intergenic | 25.0% |
| ! | TTAATTCACAAGACATGTTT+GGG | + | chr5.4:9014086-9014105 | MS.gene015265:intron | 25.0% |
| ! | TTAGTAACAGTAATGTTTCT+GGG | + | chr5.4:9010698-9010717 | MS.gene015265:intron | 25.0% |
| ! | TTAGTTACAAAAAAGATCGA+AGG | + | chr5.4:9013228-9013247 | MS.gene015265:intron | 25.0% |
| !! | AAGCTCTTTTGTAACAAATA+TGG | - | chr5.4:9013999-9014018 | None:intergenic | 25.0% |
| !! | AATAAAACATCGTAGGTTTT+TGG | - | chr5.4:9013376-9013395 | None:intergenic | 25.0% |
| !! | AATCATAATTCAGGTTTACA+TGG | - | chr5.4:9014050-9014069 | None:intergenic | 25.0% |
| !! | GTTGAGCATAACAATTTTAA+CGG | + | chr5.4:9012326-9012345 | MS.gene015265:CDS | 25.0% |
| !! | GTTTCAAGAAGATATTTTTC+AGG | + | chr5.4:9014224-9014243 | MS.gene015265:intron | 25.0% |
| !! | TTAAGCACTTAATACTGTTT+TGG | + | chr5.4:9010869-9010888 | MS.gene015265:intron | 25.0% |
| !!! | ATCTGATATGTACTTTTTCT+AGG | + | chr5.4:9011964-9011983 | MS.gene015265:intron | 25.0% |
| !!! | TATTAGTGGAGTTTTATTGT+TGG | + | chr5.4:9012878-9012897 | MS.gene015265:CDS | 25.0% |
| !!! | TCGATCTTTTTTGTAACTAA+TGG | - | chr5.4:9013228-9013247 | None:intergenic | 25.0% |
| !!! | TTGAGCATAACAATTTTAAC+GGG | + | chr5.4:9012327-9012346 | MS.gene015265:CDS | 25.0% |
| !!! | TTGCAAGTTATTTTGTTCAA+GGG | + | chr5.4:9012983-9013002 | MS.gene015265:intron | 25.0% |
| !!! | TTTATTTTCATTAGCTCTTC+AGG | + | chr5.4:9010972-9010991 | MS.gene015265:intron | 25.0% |
| !!! | TTTTCTTTTTTGTTAGGTTC+TGG | + | chr5.4:9010468-9010487 | MS.gene015265:intron | 25.0% |
| !!! | TTTTTTTTTGACAGAGAAGA+GGG | + | chr5.4:9011678-9011697 | MS.gene015265:intron | 25.0% |
| !!! | TTTTTTTTTTGACAGAGAAG+AGG | + | chr5.4:9011677-9011696 | MS.gene015265:intron | 25.0% |
| AACTAATTGCCAAGAGAAAT+AGG | + | chr5.4:9013011-9013030 | MS.gene015265:intron | 30.0% | |
| AATAAGAGTGGAATTACTGT+TGG | + | chr5.4:9014719-9014738 | MS.gene015265:CDS | 30.0% | |
| AATATCAGACCAATAATAGG+TGG | + | chr5.4:9012651-9012670 | MS.gene015265:intron | 30.0% | |
| AATGTTGTCAATTTGCACAT+GGG | - | chr5.4:9010781-9010800 | None:intergenic | 30.0% | |
| ACAGTAATTCCACTCTTATT+TGG | - | chr5.4:9014719-9014738 | None:intergenic | 30.0% | |
| ACTTGAAAATGGCTTATAGT+TGG | + | chr5.4:9011115-9011134 | MS.gene015265:intron | 30.0% | |
| ATATGCAATATTCGTAGACA+TGG | + | chr5.4:9011487-9011506 | MS.gene015265:CDS | 30.0% | |
| ATCACTAGTACAACTATTCT+GGG | - | chr5.4:9014116-9014135 | None:intergenic | 30.0% | |
| ATGTCTACGAATATTGCATA+TGG | - | chr5.4:9011488-9011507 | None:intergenic | 30.0% | |
| CAGTAACATGGTCAATTATA+AGG | - | chr5.4:9011336-9011355 | None:intergenic | 30.0% | |
| CTTGAAAATGGCTTATAGTT+GGG | + | chr5.4:9011116-9011135 | MS.gene015265:intron | 30.0% | |
| GACAACATTCTCAAAGATAA+AGG | + | chr5.4:9010792-9010811 | MS.gene015265:CDS | 30.0% | |
| GTAACTAATGGTTTCTTGAA+AGG | - | chr5.4:9013216-9013235 | None:intergenic | 30.0% | |
| GTTAGTAACAGTAATGTTTC+TGG | + | chr5.4:9010697-9010716 | MS.gene015265:intron | 30.0% | |
| TATCACTAGTACAACTATTC+TGG | - | chr5.4:9014117-9014136 | None:intergenic | 30.0% | |
| TCTCAAAGATAAAGGTTAGT+TGG | + | chr5.4:9010800-9010819 | MS.gene015265:intron | 30.0% | |
| TGCATCTAGTAACTTGAAAA+TGG | + | chr5.4:9011104-9011123 | MS.gene015265:intron | 30.0% | |
| TGGAATTGTTTACAAGAGAT+GGG | + | chr5.4:9012898-9012917 | MS.gene015265:CDS | 30.0% | |
| TTGGAATTGTTTACAAGAGA+TGG | + | chr5.4:9012897-9012916 | MS.gene015265:CDS | 30.0% | |
| TTTCTTGAAAGGGAAAACAT+GGG | - | chr5.4:9013205-9013224 | None:intergenic | 30.0% | |
| ! | AATGACATTGATTGTGGATA+AGG | - | chr5.4:9014469-9014488 | None:intergenic | 30.0% |
| ! | ATAAAGGTTAGTTGGGTTAA+GGG | + | chr5.4:9010808-9010827 | MS.gene015265:intron | 30.0% |
| ! | ATACCATCTTCCATTTTATC+AGG | + | chr5.4:9012821-9012840 | MS.gene015265:intron | 30.0% |
| ! | CTCAAAGATAAAGGTTAGTT+GGG | + | chr5.4:9010801-9010820 | MS.gene015265:intron | 30.0% |
| ! | GTGAAAAATGACATTGATTG+TGG | - | chr5.4:9014475-9014494 | None:intergenic | 30.0% |
| ! | TACCATCTTCCATTTTATCA+GGG | + | chr5.4:9012822-9012841 | MS.gene015265:intron | 30.0% |
| ! | TCTATGTATTGGGATGTTTT+CGG | + | chr5.4:9013923-9013942 | MS.gene015265:intron | 30.0% |
| ! | TTTCAAACACCTATTTCTCT+TGG | - | chr5.4:9013023-9013042 | None:intergenic | 30.0% |
| !! | AATTGTTGATAGTCCTTCTT+TGG | + | chr5.4:9010406-9010425 | MS.gene015265:intron | 30.0% |
| !! | CAATTTTTGTTTCGAGACAA+TGG | + | chr5.4:9010912-9010931 | MS.gene015265:intron | 30.0% |
| !! | CTTGCAAGTTATTTTGTTCA+AGG | + | chr5.4:9012982-9013001 | MS.gene015265:intron | 30.0% |
| !! | TGAGCATAACAATTTTAACG+GGG | + | chr5.4:9012328-9012347 | MS.gene015265:CDS | 30.0% |
| !! | TTAACTTTTGAGTCTAAACG+TGG | + | chr5.4:9010546-9010565 | MS.gene015265:intron | 30.0% |
| !!! | TTTTTTTTGACAGAGAAGAG+GGG | + | chr5.4:9011679-9011698 | MS.gene015265:intron | 30.0% |
| AAATATTGCCACTGTACTCT+GGG | + | chr5.4:9012740-9012759 | MS.gene015265:intron | 35.0% | |
| AACGTCTAAGTCGAATGAAT+GGG | + | chr5.4:9012480-9012499 | MS.gene015265:CDS | 35.0% | |
| AAGCTTCTACCAAATAAGAG+TGG | + | chr5.4:9014707-9014726 | MS.gene015265:CDS | 35.0% | |
| AAGGATGTAAATATGCGAGT+TGG | + | chr5.4:9013155-9013174 | MS.gene015265:intron | 35.0% | |
| AATTGATTATGGGTCAACTG+GGG | + | chr5.4:9011712-9011731 | MS.gene015265:CDS | 35.0% | |
| AGAAATGACGAGAACAAAAG+TGG | - | chr5.4:9010381-9010400 | None:intergenic | 35.0% | |
| AGAGTAAAATCACATGTACC+AGG | - | chr5.4:9013113-9013132 | None:intergenic | 35.0% | |
| ATAGCAGCTAAACTTTCAGT+TGG | + | chr5.4:9011457-9011476 | MS.gene015265:CDS | 35.0% | |
| ATGGAAAACGCATTACAGAA+TGG | + | chr5.4:9012369-9012388 | MS.gene015265:CDS | 35.0% | |
| ATTGTTTACAAGAGATGGGA+TGG | + | chr5.4:9012902-9012921 | MS.gene015265:CDS | 35.0% | |
| CAAACAACTTATTCAGCCTT+TGG | + | chr5.4:9013521-9013540 | MS.gene015265:CDS | 35.0% | |
| CATAATGCAACTTTCCACAA+TGG | + | chr5.4:9012392-9012411 | MS.gene015265:CDS | 35.0% | |
| CTACGAATATTGCATATGGA+AGG | - | chr5.4:9011484-9011503 | None:intergenic | 35.0% | |
| GAAGCTGATTAATATCGTTC+TGG | - | chr5.4:9013973-9013992 | None:intergenic | 35.0% | |
| GAAGGTCAAATAATTGCATG+TGG | + | chr5.4:9013732-9013751 | MS.gene015265:CDS | 35.0% | |
| GAATGTTGTCAATTTGCACA+TGG | - | chr5.4:9010782-9010801 | None:intergenic | 35.0% | |
| GAATTGATTATGGGTCAACT+GGG | + | chr5.4:9011711-9011730 | MS.gene015265:CDS | 35.0% | |
| GGTCCAATACTTGATGAAAA+TGG | + | chr5.4:9012185-9012204 | MS.gene015265:CDS | 35.0% | |
| GTTGGATAATTTCGTTGTTG+TGG | + | chr5.4:9013704-9013723 | MS.gene015265:CDS | 35.0% | |
| GTTTCTTGAAAGGGAAAACA+TGG | - | chr5.4:9013206-9013225 | None:intergenic | 35.0% | |
| TACATCCTTACAGATAACTC+TGG | - | chr5.4:9013144-9013163 | None:intergenic | 35.0% | |
| TAGCATGCATGTACTCTATA+AGG | - | chr5.4:9013290-9013309 | None:intergenic | 35.0% | |
| TGTCTACATCAGATTGTTCA+TGG | + | chr5.4:9013426-9013445 | MS.gene015265:intron | 35.0% | |
| TGTGGGAAATAAAACATCGT+AGG | - | chr5.4:9013383-9013402 | None:intergenic | 35.0% | |
| TTGTTTACAAGAGATGGGAT+GGG | + | chr5.4:9012903-9012922 | MS.gene015265:CDS | 35.0% | |
| TTTATAGCTGCTACAAACGT+TGG | + | chr5.4:9013686-9013705 | MS.gene015265:intron | 35.0% | |
| ! | ATAGCTTTTCTTCATCACCT+TGG | + | chr5.4:9010729-9010748 | MS.gene015265:CDS | 35.0% |
| ! | ATCTTCCATTTTATCAGGGA+GGG | + | chr5.4:9012826-9012845 | MS.gene015265:intron | 35.0% |
| ! | CAATAACAAAGTGGATTCCA+AGG | - | chr5.4:9010749-9010768 | None:intergenic | 35.0% |
| ! | CGTCCATTTTCATCAAGTAT+TGG | - | chr5.4:9012191-9012210 | None:intergenic | 35.0% |
| ! | GATAAAGGTTAGTTGGGTTA+AGG | + | chr5.4:9010807-9010826 | MS.gene015265:intron | 35.0% |
| ! | GCAGAGAAAGAAGATTTTTC+TGG | + | chr5.4:9013495-9013514 | MS.gene015265:CDS | 35.0% |
| ! | GCCTATGAAAACAAGCTTTT+TGG | + | chr5.4:9010998-9011017 | MS.gene015265:intron | 35.0% |
| ! | TCAGTTGATGCATGTTTCTT+TGG | + | chr5.4:9012785-9012804 | MS.gene015265:intron | 35.0% |
| ! | TCTGTAATGCGTTTTCCATT+AGG | - | chr5.4:9012368-9012387 | None:intergenic | 35.0% |
| !! | ATCCACTTTGTTATTGTTCC+TGG | + | chr5.4:9010753-9010772 | MS.gene015265:CDS | 35.0% |
| !! | GAATTCAATTCTGGAGTCAA+AGG | - | chr5.4:9010504-9010523 | None:intergenic | 35.0% |
| !! | GCCAAAAAGCTTGTTTTCAT+AGG | - | chr5.4:9011002-9011021 | None:intergenic | 35.0% |
| !! | GCTTTTAAGAACAGTTCAGT+TGG | + | chr5.4:9013070-9013089 | MS.gene015265:intron | 35.0% |
| !!! | AATGGTGTTGGTTTTGAGAA+TGG | + | chr5.4:9012410-9012429 | MS.gene015265:CDS | 35.0% |
| AACATGGGAATGCTCACAAA+TGG | - | chr5.4:9013190-9013209 | None:intergenic | 40.0% | |
| AACATGTCTGCTTCTTCAAG+AGG | - | chr5.4:9012230-9012249 | None:intergenic | 40.0% | |
| AACTTCTTGACAGGTTTGTG+AGG | + | chr5.4:9014594-9014613 | MS.gene015265:intron | 40.0% | |
| AAGAGTGGAATTACTGTTGG+TGG | + | chr5.4:9014722-9014741 | MS.gene015265:CDS | 40.0% | |
| ACAACTTATTCAGCCTTTGG+AGG | + | chr5.4:9013524-9013543 | MS.gene015265:CDS | 40.0% | |
| ACCATGTTACTGCGTTTACA+GGG | + | chr5.4:9011344-9011363 | MS.gene015265:intron | 40.0% | |
| AGACATGTTAATTCGCAAGC+GGG | + | chr5.4:9012241-9012260 | MS.gene015265:CDS | 40.0% | |
| AGACTTAAATAAGCACAGCC+AGG | - | chr5.4:9012585-9012604 | None:intergenic | 40.0% | |
| AGCAGCTAACTATGTGAAAG+CGG | + | chr5.4:9012280-9012299 | MS.gene015265:CDS | 40.0% | |
| AGGCCTAAATGACATGGATT+AGG | - | chr5.4:9014449-9014468 | None:intergenic | 40.0% | |
| ATGATTCCCAACTTCTTGAC+AGG | + | chr5.4:9014585-9014604 | MS.gene015265:intron | 40.0% | |
| ATTCAATACTTCACCAGAGC+TGG | - | chr5.4:9011819-9011838 | None:intergenic | 40.0% | |
| CAAATATTGCCACTGTACTC+TGG | + | chr5.4:9012739-9012758 | MS.gene015265:intron | 40.0% | |
| CACAAACCTGTCAAGAAGTT+GGG | - | chr5.4:9014594-9014613 | None:intergenic | 40.0% | |
| CAGACATGTTAATTCGCAAG+CGG | + | chr5.4:9012240-9012259 | MS.gene015265:CDS | 40.0% | |
| CAGCAAACACCACCTATTAT+TGG | - | chr5.4:9012663-9012682 | None:intergenic | 40.0% | |
| CCACCTATGCTGAAAAATGA+GGG | + | chr5.4:9011277-9011296 | MS.gene015265:intron | 40.0% | |
| CTACGATAAGCGAGAAGATA+AGG | - | chr5.4:9010356-9010375 | None:intergenic | 40.0% | |
| CTCCCTGATAAAATGGAAGA+TGG | - | chr5.4:9012827-9012846 | None:intergenic | 40.0% | |
| GAACGTCTAAGTCGAATGAA+TGG | + | chr5.4:9012479-9012498 | MS.gene015265:CDS | 40.0% | |
| GACTTAAATAAGCACAGCCA+GGG | - | chr5.4:9012584-9012603 | None:intergenic | 40.0% | |
| GAGATCCAGAGTTATCTGTA+AGG | + | chr5.4:9013136-9013155 | MS.gene015265:intron | 40.0% | |
| GCATGCATGATTACATGCAA+GGG | - | chr5.4:9014300-9014319 | None:intergenic | 40.0% | |
| GGAATTGATTATGGGTCAAC+TGG | + | chr5.4:9011710-9011729 | MS.gene015265:CDS | 40.0% | |
| GGTCAAATAATTGCATGTGG+TGG | + | chr5.4:9013735-9013754 | MS.gene015265:CDS | 40.0% | |
| GGTTCAAAGAGTTCACTTGT+TGG | + | chr5.4:9012848-9012867 | MS.gene015265:CDS | 40.0% | |
| GTTAGTGTCAGTGTTACAAG+TGG | + | chr5.4:9011532-9011551 | MS.gene015265:CDS | 40.0% | |
| TAACTATGTGAAAGCGGTTG+AGG | + | chr5.4:9012286-9012305 | MS.gene015265:CDS | 40.0% | |
| TCACAAACCTGTCAAGAAGT+TGG | - | chr5.4:9014595-9014614 | None:intergenic | 40.0% | |
| TCCACCTATGCTGAAAAATG+AGG | + | chr5.4:9011276-9011295 | MS.gene015265:intron | 40.0% | |
| TCTCAAAACCAACACCATTG+TGG | - | chr5.4:9012409-9012428 | None:intergenic | 40.0% | |
| TGCCAGGAACAATAACAAAG+TGG | - | chr5.4:9010758-9010777 | None:intergenic | 40.0% | |
| TGGATAAGGCCTAAATGACA+TGG | - | chr5.4:9014455-9014474 | None:intergenic | 40.0% | |
| TGGTCGGTGGAATTGATTAT+GGG | + | chr5.4:9011702-9011721 | MS.gene015265:CDS | 40.0% | |
| TTACAACACGTACAGCAGAT+TGG | + | chr5.4:9014411-9014430 | MS.gene015265:CDS | 40.0% | |
| TTACATAGCTTACATAGCCG+TGG | + | chr5.4:9013624-9013643 | MS.gene015265:intron | 40.0% | |
| TTCGTTGTTGTGGAAAGAGA+AGG | + | chr5.4:9013714-9013733 | MS.gene015265:CDS | 40.0% | |
| TTCTTTGGATCCCATTCTCA+AGG | + | chr5.4:9010421-9010440 | MS.gene015265:intron | 40.0% | |
| TTGAACAACGAAGGAGTGAA+CGG | + | chr5.4:9010272-9010291 | MS.gene015265:CDS | 40.0% | |
| TTGAGAATGGAGATGGCTTA+GGG | + | chr5.4:9012423-9012442 | MS.gene015265:CDS | 40.0% | |
| TTGAGAATGGGATCCAAAGA+AGG | - | chr5.4:9010422-9010441 | None:intergenic | 40.0% | |
| TTGTTGGATGGCACTATTAG+TGG | + | chr5.4:9012864-9012883 | MS.gene015265:CDS | 40.0% | |
| TTTGAGAATGGAGATGGCTT+AGG | + | chr5.4:9012422-9012441 | MS.gene015265:CDS | 40.0% | |
| ! | AATTTTCTTGTCAAGTGCCC+TGG | + | chr5.4:9012564-9012583 | MS.gene015265:intron | 40.0% |
| ! | CAAAGAGTTCACTTGTTGGA+TGG | + | chr5.4:9012852-9012871 | MS.gene015265:CDS | 40.0% |
| ! | CATCTTCCATTTTATCAGGG+AGG | + | chr5.4:9012825-9012844 | MS.gene015265:intron | 40.0% |
| ! | GATGCATTTGTTGCTTCTTC+AGG | - | chr5.4:9011090-9011109 | None:intergenic | 40.0% |
| ! | GGCCTAAATGACATGGATTA+GGG | - | chr5.4:9014448-9014467 | None:intergenic | 40.0% |
| ! | GTAATGCGTTTTCCATTAGG+TGG | - | chr5.4:9012365-9012384 | None:intergenic | 40.0% |
| ! | TCCCCTAATCCATGTCATTT+AGG | + | chr5.4:9014443-9014462 | MS.gene015265:intron | 40.0% |
| ! | TCTTCCATTTTATCAGGGAG+GGG | + | chr5.4:9012827-9012846 | MS.gene015265:intron | 40.0% |
| ! | TTTTGCAGTGACCTTTACGA+AGG | + | chr5.4:9013462-9013481 | MS.gene015265:intron | 40.0% |
| !! | AGCTGCTATTTCACTTTGCT+CGG | - | chr5.4:9012267-9012286 | None:intergenic | 40.0% |
| !! | GCCTAAATGACATGGATTAG+GGG | - | chr5.4:9014447-9014466 | None:intergenic | 40.0% |
| !!! | GTTGGGTTAAGGGTTTTGTT+TGG | + | chr5.4:9010818-9010837 | MS.gene015265:intron | 40.0% |
| !!! | GTTGGTTTTGAGAATGGAGA+TGG | + | chr5.4:9012416-9012435 | MS.gene015265:CDS | 40.0% |
| AAGAGATGGGATGGGAACAA+TGG | + | chr5.4:9012911-9012930 | MS.gene015265:CDS | 45.0% | |
| ACAAGCTGTTGCAACCTCAT+AGG | - | chr5.4:9012123-9012142 | None:intergenic | 45.0% | |
| AGGGCTCTTCAATCGTAACA+CGG | + | chr5.4:9011296-9011315 | MS.gene015265:intron | 45.0% | |
| AGTTCAGTTGGCATCCTTGT+GGG | + | chr5.4:9013082-9013101 | MS.gene015265:intron | 45.0% | |
| ATAAGGCCAAGCTTCACGAA+GGG | - | chr5.4:9010339-9010358 | None:intergenic | 45.0% | |
| CAAGAGGCAAGAAACGAATC+AGG | - | chr5.4:9012214-9012233 | None:intergenic | 45.0% | |
| CTGCTGTACGTGTTGTAAGT+AGG | - | chr5.4:9014409-9014428 | None:intergenic | 45.0% | |
| GAATGGGTACCTGTCAGAAT+TGG | + | chr5.4:9012496-9012515 | MS.gene015265:CDS | 45.0% | |
| GACCATGTTACTGCGTTTAC+AGG | + | chr5.4:9011343-9011362 | MS.gene015265:intron | 45.0% | |
| GAGAAGAAAGCAGCATCTCT+TGG | + | chr5.4:9014368-9014387 | MS.gene015265:CDS | 45.0% | |
| GCAACTTTCCACAATGGTGT+TGG | + | chr5.4:9012398-9012417 | MS.gene015265:CDS | 45.0% | |
| GCAGTCAAATCTCCACCTAA+TGG | + | chr5.4:9012350-9012369 | MS.gene015265:CDS | 45.0% | |
| GGAGCAAGGCTAAGTATGTT+GGG | + | chr5.4:9011365-9011384 | MS.gene015265:CDS | 45.0% | |
| GGCATGCATGATTACATGCA+AGG | - | chr5.4:9014301-9014320 | None:intergenic | 45.0% | |
| GTGAACGGAATCACTGAAGA+AGG | + | chr5.4:9010287-9010306 | MS.gene015265:CDS | 45.0% | |
| GTGGTCGGTGGAATTGATTA+TGG | + | chr5.4:9011701-9011720 | MS.gene015265:CDS | 45.0% | |
| TCCCTGTAAACGCAGTAACA+TGG | - | chr5.4:9011348-9011367 | None:intergenic | 45.0% | |
| TCTCCTCAGGGTAAGGAAAA+AGG | - | chr5.4:9013761-9013780 | None:intergenic | 45.0% | |
| TGAACCCCTCCCTGATAAAA+TGG | - | chr5.4:9012834-9012853 | None:intergenic | 45.0% | |
| TGGTAACTTTCTTGCAGCCA+AGG | + | chr5.4:9011552-9011571 | MS.gene015265:CDS | 45.0% | |
| TGTACCAGGAAAAACCCACA+AGG | - | chr5.4:9013099-9013118 | None:intergenic | 45.0% | |
| TTCTTTCTCCAGCACCTATG+AGG | + | chr5.4:9012106-9012125 | MS.gene015265:intron | 45.0% | |
| ! | CATGTGGCATACTGGTTAAG+CGG | + | chr5.4:9013547-9013566 | MS.gene015265:CDS | 45.0% |
| ! | TTTTTGACAGAGAAGAGGGG+TGG | + | chr5.4:9011682-9011701 | MS.gene015265:intron | 45.0% |
| !! | ACAGTAATGTTTCTGGGTGC+AGG | + | chr5.4:9010704-9010723 | MS.gene015265:intron | 45.0% |
| !! | CCCTCATTTTTCAGCATAGG+TGG | - | chr5.4:9011280-9011299 | None:intergenic | 45.0% |
| !! | GAGCCCTCATTTTTCAGCAT+AGG | - | chr5.4:9011283-9011302 | None:intergenic | 45.0% |
| !! | TGCTGCAGCTTTTGTTTGCA+GGG | + | chr5.4:9012520-9012539 | MS.gene015265:CDS | 45.0% |
| !!! | CTTTTCGAGTGCCTTCGTAA+AGG | - | chr5.4:9013476-9013495 | None:intergenic | 45.0% |
| !! | AAATAATCATATTAATATTA+AGG | - | chr5.4:9012085-9012104 | None:intergenic | 5.0% |
| ACAGCTTGTGCCTTGGCAAT+TGG | + | chr5.4:9012134-9012153 | MS.gene015265:CDS | 50.0% | |
| AGATGGGATGGGAACAATGG+TGG | + | chr5.4:9012914-9012933 | MS.gene015265:CDS | 50.0% | |
| AGCTTGTGCCTTGGCAATTG+GGG | + | chr5.4:9012136-9012155 | MS.gene015265:CDS | 50.0% | |
| AGTATGCCACATGCCTCCAA+AGG | - | chr5.4:9013540-9013559 | None:intergenic | 50.0% | |
| ATGCGTGAGAGACTTGATGG+TGG | + | chr5.4:9011761-9011780 | MS.gene015265:CDS | 50.0% | |
| CAGCTTGTGCCTTGGCAATT+GGG | + | chr5.4:9012135-9012154 | MS.gene015265:CDS | 50.0% | |
| CAGTTCAGTTGGCATCCTTG+TGG | + | chr5.4:9013081-9013100 | MS.gene015265:intron | 50.0% | |
| CGCAATGCGTTGAACAACGA+AGG | + | chr5.4:9010263-9010282 | MS.gene015265:CDS | 50.0% | |
| GATAAGGCCAAGCTTCACGA+AGG | - | chr5.4:9010340-9010359 | None:intergenic | 50.0% | |
| GCATGCCTTGCCTTGAGAAT+GGG | - | chr5.4:9010434-9010453 | None:intergenic | 50.0% | |
| GGGAGCAAGGCTAAGTATGT+TGG | + | chr5.4:9011364-9011383 | MS.gene015265:intron | 50.0% | |
| GGTTAAGCGGTCTGATGAAG+AGG | + | chr5.4:9013560-9013579 | MS.gene015265:CDS | 50.0% | |
| GTGAAAGCGGTTGAGGAAGA+AGG | + | chr5.4:9012293-9012312 | MS.gene015265:CDS | 50.0% | |
| TACTGCGTTTACAGGGAGCA+AGG | + | chr5.4:9011351-9011370 | MS.gene015265:intron | 50.0% | |
| TATTGCCACTGTACTCTGGG+TGG | + | chr5.4:9012743-9012762 | MS.gene015265:intron | 50.0% | |
| TCAATTTGCACATGGGTGCC+AGG | - | chr5.4:9010774-9010793 | None:intergenic | 50.0% | |
| TGCATGCCTTGCCTTGAGAA+TGG | - | chr5.4:9010435-9010454 | None:intergenic | 50.0% | |
| TGGATCCCATTCTCAAGGCA+AGG | + | chr5.4:9010426-9010445 | MS.gene015265:intron | 50.0% | |
| TGTTGCAACCTCATAGGTGC+TGG | - | chr5.4:9012117-9012136 | None:intergenic | 50.0% | |
| TTCGTTCCCTTCGTGAAGCT+TGG | + | chr5.4:9010330-9010349 | MS.gene015265:CDS | 50.0% | |
| ! | AGCGAGCAAGGCTTTGCTAT+TGG | + | chr5.4:9012449-9012468 | MS.gene015265:CDS | 50.0% |
| ! | ATTCAGCCTTTGGAGGCATG+TGG | + | chr5.4:9013531-9013550 | MS.gene015265:CDS | 50.0% |
| ! | GCATCCTTGTGGGTTTTTCC+TGG | + | chr5.4:9013092-9013111 | MS.gene015265:intron | 50.0% |
| ! | TGGCCTTTTTCCTTACCCTG+AGG | + | chr5.4:9013755-9013774 | MS.gene015265:CDS | 50.0% |
| ! | TTTGGAGGCATGTGGCATAC+TGG | + | chr5.4:9013539-9013558 | MS.gene015265:CDS | 50.0% |
| !! | CTGCTGCAGCTTTTGTTTGC+AGG | + | chr5.4:9012519-9012538 | MS.gene015265:CDS | 50.0% |
| !! | GAGCAAGGCTTTGCTATTGG+AGG | + | chr5.4:9012452-9012471 | MS.gene015265:CDS | 50.0% |
| AACGCTGCAATGTGTGCAGC+AGG | + | chr5.4:9011418-9011437 | MS.gene015265:CDS | 55.0% | |
| AACTTGGGCTACTCCAGCTC+TGG | + | chr5.4:9011803-9011822 | MS.gene015265:CDS | 55.0% | |
| ACCTCTGCACACTTCTCCTC+AGG | - | chr5.4:9013774-9013793 | None:intergenic | 55.0% | |
| AGAGCTGGAGTAGCCCAAGT+TGG | - | chr5.4:9011804-9011823 | None:intergenic | 55.0% | |
| CCAAACCACCCAGAGTACAG+TGG | - | chr5.4:9012751-9012770 | None:intergenic | 55.0% | |
| CCACTGTACTCTGGGTGGTT+TGG | + | chr5.4:9012748-9012767 | MS.gene015265:intron | 55.0% | |
| CCTCTGCACACTTCTCCTCA+GGG | - | chr5.4:9013773-9013792 | None:intergenic | 55.0% | |
| CGCATGCGTGAGAGACTTGA+TGG | + | chr5.4:9011758-9011777 | MS.gene015265:CDS | 55.0% | |
| CTGCAGCAGCCAATTCTGAC+AGG | - | chr5.4:9012508-9012527 | None:intergenic | 55.0% | |
| CTTGACAGGTTTGTGAGGCG+TGG | + | chr5.4:9014599-9014618 | MS.gene015265:intron | 55.0% | |
| GCAATTTGTCTCCCTGCCCT+TGG | - | chr5.4:9013830-9013849 | None:intergenic | 55.0% | |
| GCACACTTCTCCTCAGGGTA+AGG | - | chr5.4:9013768-9013787 | None:intergenic | 55.0% | |
| GCAGTTTCTCCTGATTGCCG+TGG | + | chr5.4:9013804-9013823 | MS.gene015265:CDS | 55.0% | |
| GGATGGGAACAATGGTGGCT+AGG | + | chr5.4:9012919-9012938 | MS.gene015265:CDS | 55.0% | |
| GGGCAGGGAGACAAATTGCT+TGG | + | chr5.4:9013831-9013850 | MS.gene015265:CDS | 55.0% | |
| GGTTGCAACAGCTTGTGCCT+TGG | + | chr5.4:9012127-9012146 | MS.gene015265:CDS | 55.0% | |
| TGACAGAGAAGAGGGGTGGT+CGG | + | chr5.4:9011686-9011705 | MS.gene015265:intron | 55.0% | |
| TTGTGCCTTGGCAATTGGGG+CGG | + | chr5.4:9012139-9012158 | MS.gene015265:CDS | 55.0% | |
| CTCCTGATTGCCGTGGCCAA+GGG | + | chr5.4:9013811-9013830 | MS.gene015265:CDS | 60.0% | |
| CTTGTCCGCCCCAATTGCCA+AGG | - | chr5.4:9012147-9012166 | None:intergenic | 60.0% | |
| GCTGCAATGTGTGCAGCAGG+AGG | + | chr5.4:9011421-9011440 | MS.gene015265:CDS | 60.0% | |
| TCTCCTGATTGCCGTGGCCA+AGG | + | chr5.4:9013810-9013829 | MS.gene015265:CDS | 60.0% | |
| ! | CCCTGAGGAGAAGTGTGCAG+AGG | + | chr5.4:9013770-9013789 | MS.gene015265:CDS | 60.0% |
| ! | GGCTTAGGGACTAGCGAGCA+AGG | + | chr5.4:9012437-9012456 | MS.gene015265:CDS | 60.0% |
| CAGAGAAGAGGGGTGGTCGG+TGG | + | chr5.4:9011689-9011708 | MS.gene015265:intron | 65.0% | |
| GATTGCCGTGGCCAAGGGCA+GGG | + | chr5.4:9013816-9013835 | MS.gene015265:CDS | 65.0% | |
| TGATTGCCGTGGCCAAGGGC+AGG | + | chr5.4:9013815-9013834 | MS.gene015265:CDS | 65.0% | |
| TGCCCTTGGCCACGGCAATC+AGG | - | chr5.4:9013816-9013835 | None:intergenic | 65.0% | |
| TGTCTCCCTGCCCTTGGCCA+CGG | - | chr5.4:9013824-9013843 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 9010254 | 9014766 | 9010254 | ID=MS.gene015265 |
| chr5.4 | mRNA | 9010254 | 9014766 | 9010254 | ID=MS.gene015265.t1;Parent=MS.gene015265 |
| chr5.4 | exon | 9010254 | 9010391 | 9010254 | ID=MS.gene015265.t1.exon1;Parent=MS.gene015265.t1 |
| chr5.4 | CDS | 9010254 | 9010391 | 9010254 | ID=cds.MS.gene015265.t1;Parent=MS.gene015265.t1 |
| chr5.4 | exon | 9010726 | 9010813 | 9010726 | ID=MS.gene015265.t1.exon2;Parent=MS.gene015265.t1 |
| chr5.4 | CDS | 9010726 | 9010813 | 9010726 | ID=cds.MS.gene015265.t1;Parent=MS.gene015265.t1 |
| chr5.4 | exon | 9011365 | 9011573 | 9011365 | ID=MS.gene015265.t1.exon3;Parent=MS.gene015265.t1 |
| chr5.4 | CDS | 9011365 | 9011573 | 9011365 | ID=cds.MS.gene015265.t1;Parent=MS.gene015265.t1 |
| chr5.4 | exon | 9011692 | 9011843 | 9011692 | ID=MS.gene015265.t1.exon4;Parent=MS.gene015265.t1 |
| chr5.4 | CDS | 9011692 | 9011843 | 9011692 | ID=cds.MS.gene015265.t1;Parent=MS.gene015265.t1 |
| chr5.4 | exon | 9012118 | 9012541 | 9012118 | ID=MS.gene015265.t1.exon5;Parent=MS.gene015265.t1 |
| chr5.4 | CDS | 9012118 | 9012541 | 9012118 | ID=cds.MS.gene015265.t1;Parent=MS.gene015265.t1 |
| chr5.4 | exon | 9012843 | 9012940 | 9012843 | ID=MS.gene015265.t1.exon6;Parent=MS.gene015265.t1 |
| chr5.4 | CDS | 9012843 | 9012940 | 9012843 | ID=cds.MS.gene015265.t1;Parent=MS.gene015265.t1 |
| chr5.4 | exon | 9013470 | 9013581 | 9013470 | ID=MS.gene015265.t1.exon7;Parent=MS.gene015265.t1 |
| chr5.4 | CDS | 9013470 | 9013581 | 9013470 | ID=cds.MS.gene015265.t1;Parent=MS.gene015265.t1 |
| chr5.4 | exon | 9013693 | 9013852 | 9013693 | ID=MS.gene015265.t1.exon8;Parent=MS.gene015265.t1 |
| chr5.4 | CDS | 9013693 | 9013852 | 9013693 | ID=cds.MS.gene015265.t1;Parent=MS.gene015265.t1 |
| chr5.4 | exon | 9014360 | 9014432 | 9014360 | ID=MS.gene015265.t1.exon9;Parent=MS.gene015265.t1 |
| chr5.4 | CDS | 9014360 | 9014432 | 9014360 | ID=cds.MS.gene015265.t1;Parent=MS.gene015265.t1 |
| chr5.4 | exon | 9014607 | 9014766 | 9014607 | ID=MS.gene015265.t1.exon10;Parent=MS.gene015265.t1 |
| chr5.4 | CDS | 9014607 | 9014766 | 9014607 | ID=cds.MS.gene015265.t1;Parent=MS.gene015265.t1 |
| Gene Sequence |
| Protein sequence |
