Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20305.t1 | RHN53916.1 | 96.3 | 599 | 14 | 3 | 1 | 592 | 1 | 598 | 0.00E+00 | 1127.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20305.t1 | B5X4Z4 | 64.7 | 601 | 173 | 9 | 15 | 584 | 18 | 610 | 4.4e-210 | 732.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20305.t1 | A0A396HKT9 | 96.3 | 599 | 14 | 3 | 1 | 592 | 1 | 598 | 0.0e+00 | 1127.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene20305.t1 | TR | GNAT |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058982 | MS.gene20305 | 0.814641 | 1.39E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene30927 | MS.gene20305 | PPI |
| MS.gene015265 | MS.gene20305 | PPI |
| MS.gene20305 | MS.gene43534 | PPI |
| MS.gene20305 | MS.gene09607 | PPI |
| MS.gene071560 | MS.gene20305 | PPI |
| MS.gene028619 | MS.gene20305 | PPI |
| MS.gene20305 | MS.gene31184 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20305.t1 | MTR_5g015300 | 94.590 | 610 | 14 | 3 | 1 | 592 | 1 | 609 | 0.0 | 1173 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20305.t1 | AT4G37670 | 64.725 | 601 | 173 | 9 | 15 | 584 | 18 | 610 | 0.0 | 767 |
| MS.gene20305.t1 | AT2G22910 | 69.070 | 527 | 143 | 3 | 78 | 584 | 75 | 601 | 0.0 | 744 |
| MS.gene20305.t1 | AT4G37670 | 63.346 | 532 | 156 | 9 | 15 | 515 | 18 | 541 | 0.0 | 652 |
Find 132 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAGCTTGTGCCTTGGCAAT+TGG | 0.248266 | 5.1:+7888418 | MS.gene20305:CDS |
| GATGAAGTGGTGAAGTTGAT+AGG | 0.250695 | 5.1:-7886283 | None:intergenic |
| ACAGTAATTCCACTCTTATT+TGG | 0.256128 | 5.1:-7890986 | None:intergenic |
| TACTGTTGGTGGAAACAAAT+TGG | 0.281715 | 5.1:+7891003 | MS.gene20305:CDS |
| TCTCCTCAGGGTAAGGAAAA+AGG | 0.290072 | 5.1:-7890022 | None:intergenic |
| CAGCTTGTGCCTTGGCAATT+GGG | 0.298414 | 5.1:+7888419 | MS.gene20305:CDS |
| ATCCACTTTGTTATTGTTCC+TGG | 0.304270 | 5.1:+7886906 | MS.gene20305:CDS |
| GGTCCAATACTTGATGAAAA+TGG | 0.316810 | 5.1:+7888469 | MS.gene20305:CDS |
| GACAACATTCTCAAAGATAA+AGG | 0.329004 | 5.1:+7886945 | MS.gene20305:CDS |
| AGCGAGCAAGGCTTTGCTAT+TGG | 0.336026 | 5.1:+7888733 | MS.gene20305:CDS |
| TTAAAATTGTTATGCTCAAC+AGG | 0.336039 | 5.1:-7888607 | None:intergenic |
| TGAAATATGTGCAGATTATA+TGG | 0.338432 | 5.1:+7890616 | MS.gene20305:intron |
| CAAACAACTTATTCAGCCTT+TGG | 0.343314 | 5.1:+7889783 | MS.gene20305:CDS |
| TAAAGGAGCGAGGTTTGAAT+TGG | 0.357227 | 5.1:-7886348 | None:intergenic |
| TTGGAATTGTTTACAAGAGA+TGG | 0.378945 | 5.1:+7889181 | MS.gene20305:CDS |
| TTCGTTCCCTTCGTGAAGCT+TGG | 0.379069 | 5.1:+7886482 | MS.gene20305:CDS |
| AGCTGCTATTTCACTTTGCT+CGG | 0.382328 | 5.1:-7888548 | None:intergenic |
| TTGTTGGATGGCACTATTAG+TGG | 0.387463 | 5.1:+7889148 | MS.gene20305:CDS |
| GCAGTCAAATCTCCACCTAA+TGG | 0.388073 | 5.1:+7888634 | MS.gene20305:CDS |
| GGAATTGATTATGGGTCAAC+TGG | 0.390661 | 5.1:+7887994 | MS.gene20305:CDS |
| CATATAATACTTAGAATTGC+GGG | 0.398277 | 5.1:-7890951 | None:intergenic |
| TTTGAGAATGGAGATGGCTT+AGG | 0.403018 | 5.1:+7888706 | MS.gene20305:CDS |
| TTTGGAGGCATGTGGCATAC+TGG | 0.410523 | 5.1:+7889801 | MS.gene20305:CDS |
| CTATATCTCCCAACATACTT+AGG | 0.421227 | 5.1:-7887651 | None:intergenic |
| ACCTCTGCACACTTCTCCTC+AGG | 0.437888 | 5.1:-7890035 | None:intergenic |
| GTGGTCGGTGGAATTGATTA+TGG | 0.441744 | 5.1:+7887985 | MS.gene20305:CDS |
| CGCATGCGTGAGAGACTTGA+TGG | 0.443671 | 5.1:+7888042 | MS.gene20305:CDS |
| GTTGGATAATTTCGTTGTTG+TGG | 0.449871 | 5.1:+7889968 | MS.gene20305:CDS |
| TTCTTTCTCCAGCACCTATG+AGG | 0.453361 | 5.1:+7888390 | MS.gene20305:intron |
| TCAATTTGCACATGGGTGCC+AGG | 0.453790 | 5.1:-7886924 | None:intergenic |
| ACAAGCTGTTGCAACCTCAT+AGG | 0.454255 | 5.1:-7888404 | None:intergenic |
| ATGTCTACGAATATTGCATA+TGG | 0.454955 | 5.1:-7887763 | None:intergenic |
| ATTCAATACTTCACCAGAGC+TGG | 0.458082 | 5.1:-7888100 | None:intergenic |
| TGTCCTTGACCACGGCAATC+AGG | 0.460303 | 5.1:-7890077 | None:intergenic |
| GTGGTGAAGTTGATAGGGTT+TGG | 0.465407 | 5.1:-7886277 | None:intergenic |
| GAGAAGAAAGCAGCATCTCT+TGG | 0.466675 | 5.1:+7890638 | MS.gene20305:CDS |
| GGTTCAAAGAGTTCACTTGT+TGG | 0.467382 | 5.1:+7889132 | MS.gene20305:CDS |
| TTGAGAATGGAGATGGCTTA+GGG | 0.472572 | 5.1:+7888707 | MS.gene20305:CDS |
| CAAGAGGCAAGAAACGAATT+AGG | 0.474284 | 5.1:-7888495 | None:intergenic |
| GAACGGCTAAGTCGAATGAA+TGG | 0.475981 | 5.1:+7888763 | MS.gene20305:CDS |
| GTGAAAGCAGTTGAGGAAGA+AGG | 0.476064 | 5.1:+7888577 | MS.gene20305:CDS |
| ATGAAGTGGTGAAGTTGATA+GGG | 0.485825 | 5.1:-7886282 | None:intergenic |
| GGAGCAAGCCTAAGTATGTT+GGG | 0.485838 | 5.1:+7887643 | MS.gene20305:CDS |
| AAGAGTGGAATTACTGTTGG+TGG | 0.488225 | 5.1:+7890992 | MS.gene20305:CDS |
| GAATGGGTACCTGTCAGAAT+TGG | 0.488645 | 5.1:+7888780 | MS.gene20305:CDS |
| TGATTGCCGTGGTCAAGGAC+AGG | 0.489686 | 5.1:+7890079 | MS.gene20305:CDS |
| TGGTAACTTTCTTGCAGCCA+AGG | 0.491225 | 5.1:+7887830 | MS.gene20305:CDS |
| AGCTTGTGCCTTGGCAATTG+GGG | 0.494564 | 5.1:+7888420 | MS.gene20305:CDS |
| GCACACTTCTCCTCAGGGTA+AGG | 0.495453 | 5.1:-7890029 | None:intergenic |
| AACGCTGCAATGTGTGCAGC+AGG | 0.498191 | 5.1:+7887696 | MS.gene20305:CDS |
| AAGTTAATATGCGTTATAGA+TGG | 0.498769 | 5.1:+7888448 | MS.gene20305:CDS |
| CAAAGAGTTCACTTGTTGGA+TGG | 0.500446 | 5.1:+7889136 | MS.gene20305:CDS |
| GGTTTGGAAGGGAGTTATAG+AGG | 0.501277 | 5.1:-7886261 | None:intergenic |
| ACAACTTATTCAGCCTTTGG+AGG | 0.501598 | 5.1:+7889786 | MS.gene20305:CDS |
| CTACGATAAGCGAGAAGATA+AGG | 0.502922 | 5.1:-7886505 | None:intergenic |
| AACATGTCTGCTTCTTCAAG+AGG | 0.505053 | 5.1:-7888511 | None:intergenic |
| GGGAGCAAGCCTAAGTATGT+TGG | 0.510508 | 5.1:+7887642 | MS.gene20305:intron |
| ATTGTTTACAAGAGATGGGA+TGG | 0.511266 | 5.1:+7889186 | MS.gene20305:CDS |
| AGAAATGACAAGAACAAAAG+TGG | 0.520756 | 5.1:-7886530 | None:intergenic |
| TGGAATTGTTTACAAGAGAT+GGG | 0.523017 | 5.1:+7889182 | MS.gene20305:CDS |
| AACTTGGGCTACTCCAGCTC+TGG | 0.523097 | 5.1:+7888087 | MS.gene20305:CDS |
| CTGCTGTACGTGTTGTAAGT+AGG | 0.526017 | 5.1:-7890676 | None:intergenic |
| GGATGGGAACAATGGTGGCT+AGG | 0.526598 | 5.1:+7889203 | MS.gene20305:CDS |
| TCTCCTGATTGCCGTGGTCA+AGG | 0.528056 | 5.1:+7890074 | MS.gene20305:CDS |
| TTCGTTGTTGTGGAAAGAGA+AGG | 0.528576 | 5.1:+7889978 | MS.gene20305:CDS |
| GAGCAAGGCTTTGCTATTGG+AGG | 0.529772 | 5.1:+7888736 | MS.gene20305:CDS |
| TGGTCGGTGGAATTGATTAT+GGG | 0.530856 | 5.1:+7887986 | MS.gene20305:CDS |
| AATTGGAGATTAAGTTGTTG+AGG | 0.531209 | 5.1:-7886331 | None:intergenic |
| TGAAGTTGATAGGGTTTGGA+AGG | 0.532697 | 5.1:-7886273 | None:intergenic |
| TTATAGAGGCGCGATAAAGA+AGG | 0.534931 | 5.1:-7886247 | None:intergenic |
| CTGCAGCAGCCAATTCTGAC+AGG | 0.535179 | 5.1:-7888789 | None:intergenic |
| ATAGCAGCTAAACTTTCAGT+TGG | 0.541876 | 5.1:+7887735 | MS.gene20305:CDS |
| AACGGCTAAGTCGAATGAAT+GGG | 0.542375 | 5.1:+7888764 | MS.gene20305:CDS |
| GCAACTTTCCACAATGGTGT+TGG | 0.543734 | 5.1:+7888682 | MS.gene20305:CDS |
| TCATATAATACTTAGAATTG+CGG | 0.547939 | 5.1:-7890952 | None:intergenic |
| TTTATAGCTGCTACAAACGT+TGG | 0.550580 | 5.1:+7889950 | MS.gene20305:intron |
| GAGGATTGAAGTGAGAGTAT+TGG | 0.555417 | 5.1:-7886312 | None:intergenic |
| GGCTTAGGGACTAGCGAGCA+AGG | 0.560101 | 5.1:+7888721 | MS.gene20305:CDS |
| TTACAACACGTACAGCAGAT+TGG | 0.561074 | 5.1:+7890681 | MS.gene20305:CDS |
| CAATAACAAAGTGGATTCCA+AGG | 0.563812 | 5.1:-7886899 | None:intergenic |
| GTGAACGGAATCACTGAAGA+AGG | 0.566221 | 5.1:+7886439 | MS.gene20305:CDS |
| ATGGAAAACGCATTACAGAA+TGG | 0.566481 | 5.1:+7888653 | MS.gene20305:CDS |
| TTGTGCCTTGGCAATTGGGG+CGG | 0.568264 | 5.1:+7888423 | MS.gene20305:CDS |
| TAACTATGTGAAAGCAGTTG+AGG | 0.569422 | 5.1:+7888570 | MS.gene20305:CDS |
| GGACAGGGAGACAAATTGCT+TGG | 0.571020 | 5.1:+7890095 | MS.gene20305:CDS |
| AACTTGTTGACAGGTTTGTG+AGG | 0.572143 | 5.1:+7890864 | MS.gene20305:intron |
| AGACATGTTAATTCGCAAGC+GGG | 0.573614 | 5.1:+7888525 | MS.gene20305:CDS |
| GAATTGATTATGGGTCAACT+GGG | 0.574055 | 5.1:+7887995 | MS.gene20305:CDS |
| GGTTAAGCGGTCTGATGAAG+AGG | 0.575532 | 5.1:+7889822 | MS.gene20305:CDS |
| TTGCTATTGGAGGTCAAGAA+CGG | 0.575766 | 5.1:+7888746 | MS.gene20305:CDS |
| TTGAACAACGAAGGAGTGAA+CGG | 0.576908 | 5.1:+7886424 | MS.gene20305:CDS |
| CAGAGAAGAGGGGTGGTCGG+TGG | 0.577629 | 5.1:+7887973 | MS.gene20305:intron |
| CCTTTCGAGTGCCTTCGTAA+AGG | 0.580703 | 5.1:-7889735 | None:intergenic |
| GATTGCCGTGGTCAAGGACA+GGG | 0.586053 | 5.1:+7890080 | MS.gene20305:CDS |
| AATAAGAGTGGAATTACTGT+TGG | 0.587427 | 5.1:+7890989 | MS.gene20305:CDS |
| CTTGTCCGCCCCAATTGCCA+AGG | 0.592760 | 5.1:-7888428 | None:intergenic |
| TGACAGAGAAGAGGGGTGGT+CGG | 0.595410 | 5.1:+7887970 | MS.gene20305:intron |
| TGTCTCCCTGTCCTTGACCA+CGG | 0.601589 | 5.1:-7890085 | None:intergenic |
| ATTCAGCCTTTGGAGGCATG+TGG | 0.604861 | 5.1:+7889793 | MS.gene20305:CDS |
| AACGAGGAATTAAAGGAGCG+AGG | 0.605298 | 5.1:-7886358 | None:intergenic |
| ATATGCAATATTCGTAGACA+TGG | 0.605536 | 5.1:+7887765 | MS.gene20305:CDS |
| GGTTGCAACAGCTTGTGCCT+TGG | 0.608428 | 5.1:+7888411 | MS.gene20305:CDS |
| CTACGAATATTGCATATGGA+AGG | 0.610959 | 5.1:-7887759 | None:intergenic |
| AAGAGATGGGATGGGAACAA+TGG | 0.612647 | 5.1:+7889195 | MS.gene20305:CDS |
| TTGTTTACAAGAGATGGGAT+GGG | 0.612686 | 5.1:+7889187 | MS.gene20305:CDS |
| GTATTGGCGAGAAGATGAAG+TGG | 0.613696 | 5.1:-7886296 | None:intergenic |
| CGCAATGCGTTGAACAACGA+AGG | 0.616719 | 5.1:+7886415 | MS.gene20305:CDS |
| GTTGACAGGTTTGTGAGGCG+TGG | 0.617266 | 5.1:+7890869 | MS.gene20305:intron |
| GAAGTTGATAGGGTTTGGAA+GGG | 0.618757 | 5.1:-7886272 | None:intergenic |
| TCTCAAAACCAACACCATTG+TGG | 0.620130 | 5.1:-7888690 | None:intergenic |
| AAGCTTCTACCAAATAAGAG+TGG | 0.625840 | 5.1:+7890977 | MS.gene20305:CDS |
| AGATGGGATGGGAACAATGG+TGG | 0.628080 | 5.1:+7889198 | MS.gene20305:CDS |
| GAATGTTGTCAATTTGCACA+TGG | 0.630324 | 5.1:-7886932 | None:intergenic |
| GATAAGGCCAAGCTTCACGA+AGG | 0.630575 | 5.1:-7886489 | None:intergenic |
| AGAGCTGGAGTAGCCCAAGT+TGG | 0.630783 | 5.1:-7888085 | None:intergenic |
| AGTATGCCACATGCCTCCAA+AGG | 0.632526 | 5.1:-7889799 | None:intergenic |
| CATGTGGCATACTGGTTAAG+CGG | 0.633218 | 5.1:+7889809 | MS.gene20305:CDS |
| CAGACATGTTAATTCGCAAG+CGG | 0.635149 | 5.1:+7888524 | MS.gene20305:CDS |
| GCAGTATCTCCTGATTGCCG+TGG | 0.637078 | 5.1:+7890068 | MS.gene20305:CDS |
| GAAGGTCAAATAATTGCATG+TGG | 0.638311 | 5.1:+7889996 | MS.gene20305:CDS |
| CCTCTGCACACTTCTCCTCA+GGG | 0.642147 | 5.1:-7890034 | None:intergenic |
| CCTTTACGAAGGCACTCGAA+AGG | 0.642671 | 5.1:+7889735 | MS.gene20305:CDS |
| GCTGCAATGTGTGCAGCAGG+AGG | 0.644204 | 5.1:+7887699 | MS.gene20305:CDS |
| CCCTGAGGAGAAGTGTGCAG+AGG | 0.655036 | 5.1:+7890034 | MS.gene20305:CDS |
| GGTCAAATAATTGCATGTGG+TGG | 0.656987 | 5.1:+7889999 | MS.gene20305:CDS |
| GTTAGTGTCAGTGTTACAAG+TGG | 0.659841 | 5.1:+7887810 | MS.gene20305:CDS |
| TGCCAGGAACAATAACAAAG+TGG | 0.667425 | 5.1:-7886908 | None:intergenic |
| CATAATGCAACTTTCCACAA+TGG | 0.674650 | 5.1:+7888676 | MS.gene20305:CDS |
| ATAAGGCCAAGCTTCACGAA+GGG | 0.694309 | 5.1:-7886488 | None:intergenic |
| AATGTTGTCAATTTGCACAT+GGG | 0.704234 | 5.1:-7886931 | None:intergenic |
| AATTGATTATGGGTCAACTG+GGG | 0.744930 | 5.1:+7887996 | MS.gene20305:CDS |
| ATGCGTGAGAGACTTGATGG+CGG | 0.766472 | 5.1:+7888045 | MS.gene20305:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATATATATTAAAAAGATG+TGG | - | chr5.1:7890588-7890607 | None:intergenic | 10.0% |
| !! | ATTAAAACAATAAAAGCAAA+AGG | - | chr5.1:7886785-7886804 | None:intergenic | 15.0% |
| !! | GAAAATTAAAAGATATAACA+TGG | - | chr5.1:7888835-7888854 | None:intergenic | 15.0% |
| !! | TAATTATATACATATACAGA+TGG | - | chr5.1:7887290-7887309 | None:intergenic | 15.0% |
| !! | TTGAAATTATTTGTAAATGA+TGG | + | chr5.1:7890138-7890157 | MS.gene20305:intron | 15.0% |
| !!! | AATAATTTGTTCTATGTATT+GGG | + | chr5.1:7890177-7890196 | MS.gene20305:intron | 15.0% |
| !!! | TAATAATTTGTTCTATGTAT+TGG | + | chr5.1:7890176-7890195 | MS.gene20305:intron | 15.0% |
| !! | AAACAAATTGGTTACAAATT+AGG | + | chr5.1:7891015-7891034 | MS.gene20305:CDS | 20.0% |
| !! | AATTAGAATGAATTCAATTC+TGG | - | chr5.1:7886668-7886687 | None:intergenic | 20.0% |
| !! | ACATCTATCTATACATAAAA+CGG | - | chr5.1:7887257-7887276 | None:intergenic | 20.0% |
| !! | CAAACAAGTGATTATATTTA+GGG | + | chr5.1:7887437-7887456 | MS.gene20305:intron | 20.0% |
| !! | GGTATTAATTAAGGTTTATT+TGG | + | chr5.1:7887342-7887361 | MS.gene20305:intron | 20.0% |
| !! | TCAAACAAGTGATTATATTT+AGG | + | chr5.1:7887436-7887455 | MS.gene20305:intron | 20.0% |
| !! | TCATATAATACTTAGAATTG+CGG | - | chr5.1:7890955-7890974 | None:intergenic | 20.0% |
| !!! | AAACTCTTTTGTAACAAATA+TGG | - | chr5.1:7890263-7890282 | None:intergenic | 20.0% |
| !!! | AATTATTTGTAAATGATGGA+TGG | + | chr5.1:7890142-7890161 | MS.gene20305:intron | 20.0% |
| !!! | AGACAAGTTTTTTTGTTTAA+AGG | + | chr5.1:7890772-7890791 | MS.gene20305:intron | 20.0% |
| !!! | ATAGTTATTTTAACCAACTT+GGG | + | chr5.1:7888072-7888091 | MS.gene20305:CDS | 20.0% |
| !!! | ATTGTTTTCTTTTTCTTTTC+AGG | - | chr5.1:7890923-7890942 | None:intergenic | 20.0% |
| !!! | TATAGTTATTTTAACCAACT+TGG | + | chr5.1:7888071-7888090 | MS.gene20305:CDS | 20.0% |
| !!! | TTCTAAACTTTTAAGTATGT+GGG | - | chr5.1:7889662-7889681 | None:intergenic | 20.0% |
| !!! | TTGCTATTTTCTTTTTTGTT+TGG | + | chr5.1:7886617-7886636 | MS.gene20305:intron | 20.0% |
| !!! | TTGTTTTCTTTTTCTTTTCA+GGG | - | chr5.1:7890922-7890941 | None:intergenic | 20.0% |
| !!! | TTTCTAAACTTTTAAGTATG+TGG | - | chr5.1:7889663-7889682 | None:intergenic | 20.0% |
| ! | AAACATAAACATGTTGAAAG+TGG | - | chr5.1:7890474-7890493 | None:intergenic | 25.0% |
| ! | AAGTTAATATGCGTTATAGA+TGG | + | chr5.1:7888448-7888467 | MS.gene20305:CDS | 25.0% |
| ! | AATAAGCTGAAAAAAGCTTA+TGG | - | chr5.1:7887116-7887135 | None:intergenic | 25.0% |
| ! | AATGTTTAGACAAATTACCA+CGG | - | chr5.1:7889906-7889925 | None:intergenic | 25.0% |
| ! | ACCTGAATTATGATTATGAA+AGG | + | chr5.1:7890319-7890338 | MS.gene20305:intron | 25.0% |
| ! | ATCAATATCAGACCAATAAT+AGG | + | chr5.1:7888932-7888951 | MS.gene20305:intron | 25.0% |
| ! | ATTAATTCACAAGACATGTT+TGG | + | chr5.1:7890349-7890368 | MS.gene20305:intron | 25.0% |
| ! | ATTACTAGTACAACTATTCT+GGG | - | chr5.1:7890380-7890399 | None:intergenic | 25.0% |
| ! | CATATAATACTTAGAATTGC+GGG | - | chr5.1:7890954-7890973 | None:intergenic | 25.0% |
| ! | TAAAAGCTAAAACAACTTCA+AGG | - | chr5.1:7889341-7889360 | None:intergenic | 25.0% |
| ! | TAACTAATGGTTTCTTGAAA+GGG | - | chr5.1:7889499-7889518 | None:intergenic | 25.0% |
| ! | TATATAAGGTGATCCAAATA+AGG | - | chr5.1:7887000-7887019 | None:intergenic | 25.0% |
| ! | TATTACTAGTACAACTATTC+TGG | - | chr5.1:7890381-7890400 | None:intergenic | 25.0% |
| ! | TCCTTTCATAATCATAATTC+AGG | - | chr5.1:7890323-7890342 | None:intergenic | 25.0% |
| ! | TGAAATATGTGCAGATTATA+TGG | + | chr5.1:7890616-7890635 | MS.gene20305:intron | 25.0% |
| ! | TGAATCATAAAATCAAACCT+TGG | - | chr5.1:7887850-7887869 | None:intergenic | 25.0% |
| ! | TTAAAATTGTTATGCTCAAC+AGG | - | chr5.1:7888610-7888629 | None:intergenic | 25.0% |
| ! | TTAAGCACTTAATACTGTTT+GGG | + | chr5.1:7887025-7887044 | MS.gene20305:intron | 25.0% |
| ! | TTAATTCACAAGACATGTTT+GGG | + | chr5.1:7890350-7890369 | MS.gene20305:intron | 25.0% |
| ! | TTAGTAACAGTAATGTTTCT+GGG | + | chr5.1:7886851-7886870 | MS.gene20305:intron | 25.0% |
| ! | TTAGTTACAAAAAAGATCGA+AGG | + | chr5.1:7889512-7889531 | MS.gene20305:intron | 25.0% |
| !! | AATCATAATTCAGGTTTACA+TGG | - | chr5.1:7890314-7890333 | None:intergenic | 25.0% |
| !! | ACATATACAGATGGTATTTT+AGG | - | chr5.1:7887281-7887300 | None:intergenic | 25.0% |
| !! | GTTGAGCATAACAATTTTAA+CGG | + | chr5.1:7888610-7888629 | MS.gene20305:CDS | 25.0% |
| !! | GTTTCAAGAAGATATTTTTC+AGG | + | chr5.1:7890490-7890509 | MS.gene20305:intron | 25.0% |
| !! | TTGGAAACAATTTTCTTTTG+TGG | + | chr5.1:7887061-7887080 | MS.gene20305:intron | 25.0% |
| !!! | ATCTGATATGTACTTTTTCT+AGG | + | chr5.1:7888248-7888267 | MS.gene20305:intron | 25.0% |
| !!! | TATTAGTGGAGTTTTATTGT+TGG | + | chr5.1:7889162-7889181 | MS.gene20305:CDS | 25.0% |
| !!! | TCGATCTTTTTTGTAACTAA+TGG | - | chr5.1:7889512-7889531 | None:intergenic | 25.0% |
| !!! | TTGAGCATAACAATTTTAAC+GGG | + | chr5.1:7888611-7888630 | MS.gene20305:CDS | 25.0% |
| !!! | TTGCAAGTTATTTTGTTCAA+GGG | + | chr5.1:7889267-7889286 | MS.gene20305:intron | 25.0% |
| !!! | TTTTCTTTTTTGTTTGGTTC+TGG | + | chr5.1:7886623-7886642 | MS.gene20305:intron | 25.0% |
| !!! | TTTTTTTTTGACAGAGAAGA+GGG | + | chr5.1:7887962-7887981 | MS.gene20305:intron | 25.0% |
| !!! | TTTTTTTTTTGACAGAGAAG+AGG | + | chr5.1:7887961-7887980 | MS.gene20305:intron | 25.0% |
| AACTAATTGCCAAGACAAAT+AGG | + | chr5.1:7889295-7889314 | MS.gene20305:intron | 30.0% | |
| AATAAGAGTGGAATTACTGT+TGG | + | chr5.1:7890989-7891008 | MS.gene20305:CDS | 30.0% | |
| AATATCAGACCAATAATAGG+TGG | + | chr5.1:7888935-7888954 | MS.gene20305:intron | 30.0% | |
| AATGTTGTCAATTTGCACAT+GGG | - | chr5.1:7886934-7886953 | None:intergenic | 30.0% | |
| ACAGTAATTCCACTCTTATT+TGG | - | chr5.1:7890989-7891008 | None:intergenic | 30.0% | |
| AGAAATGACAAGAACAAAAG+TGG | - | chr5.1:7886533-7886552 | None:intergenic | 30.0% | |
| AGTGCTTAAGTCAGTATATA+AGG | - | chr5.1:7887014-7887033 | None:intergenic | 30.0% | |
| ATAACAAGCTGTACTCTATA+AGG | - | chr5.1:7889574-7889593 | None:intergenic | 30.0% | |
| ATATGCAATATTCGTAGACA+TGG | + | chr5.1:7887765-7887784 | MS.gene20305:CDS | 30.0% | |
| ATGTCTACGAATATTGCATA+TGG | - | chr5.1:7887766-7887785 | None:intergenic | 30.0% | |
| CTTAAGCACTTAATACTGTT+TGG | + | chr5.1:7887024-7887043 | MS.gene20305:intron | 30.0% | |
| GACAACATTCTCAAAGATAA+AGG | + | chr5.1:7886945-7886964 | MS.gene20305:CDS | 30.0% | |
| GCCATAGGTGTTTATATTTA+GGG | - | chr5.1:7887189-7887208 | None:intergenic | 30.0% | |
| GTAACTAATGGTTTCTTGAA+AGG | - | chr5.1:7889500-7889519 | None:intergenic | 30.0% | |
| GTTAGTAACAGTAATGTTTC+TGG | + | chr5.1:7886850-7886869 | MS.gene20305:intron | 30.0% | |
| TAGGTGTTTATATTTAGGGA+CGG | - | chr5.1:7887185-7887204 | None:intergenic | 30.0% | |
| TCCCTAAATATAAACACCTA+TGG | + | chr5.1:7887185-7887204 | MS.gene20305:intron | 30.0% | |
| TCTCAAAGATAAAGGTTAGT+TGG | + | chr5.1:7886953-7886972 | MS.gene20305:intron | 30.0% | |
| TGCATCTAGTAACTTGAAAA+TGG | + | chr5.1:7887387-7887406 | MS.gene20305:intron | 30.0% | |
| TGCCATAGGTGTTTATATTT+AGG | - | chr5.1:7887190-7887209 | None:intergenic | 30.0% | |
| TGGAATTGTTTACAAGAGAT+GGG | + | chr5.1:7889182-7889201 | MS.gene20305:CDS | 30.0% | |
| TTGAAAATGGCTTATAGTTG+TGG | + | chr5.1:7887400-7887419 | MS.gene20305:intron | 30.0% | |
| TTGGAATTGTTTACAAGAGA+TGG | + | chr5.1:7889181-7889200 | MS.gene20305:CDS | 30.0% | |
| TTTCAAACACCTATTTGTCT+TGG | - | chr5.1:7889307-7889326 | None:intergenic | 30.0% | |
| TTTCTTGAAAGGGAAAACAT+GGG | - | chr5.1:7889489-7889508 | None:intergenic | 30.0% | |
| TTTGTTTGGATCACCTTATT+TGG | + | chr5.1:7886984-7887003 | MS.gene20305:intron | 30.0% | |
| ! | AAATGAACATCGTAGGTTTT+TGG | - | chr5.1:7889639-7889658 | None:intergenic | 30.0% |
| ! | AATGACATTGATTGTGGATA+AGG | - | chr5.1:7890739-7890758 | None:intergenic | 30.0% |
| ! | AATTGGAGATTAAGTTGTTG+AGG | - | chr5.1:7886334-7886353 | None:intergenic | 30.0% |
| ! | ATAAAGGTTAGTTGGGTTAA+GGG | + | chr5.1:7886961-7886980 | MS.gene20305:intron | 30.0% |
| ! | ATACCATCTTCCATTTTATC+AGG | + | chr5.1:7889105-7889124 | MS.gene20305:intron | 30.0% |
| ! | CTCAAAGATAAAGGTTAGTT+GGG | + | chr5.1:7886954-7886973 | MS.gene20305:intron | 30.0% |
| ! | GTGAAAAATGACATTGATTG+TGG | - | chr5.1:7890745-7890764 | None:intergenic | 30.0% |
| ! | TACCATCTTCCATTTTATCA+GGG | + | chr5.1:7889106-7889125 | MS.gene20305:intron | 30.0% |
| ! | TCTATGTATTGGGATGTTTT+CGG | + | chr5.1:7890187-7890206 | MS.gene20305:intron | 30.0% |
| !! | CTTATTTTCATTAGCTCTTC+AGG | + | chr5.1:7887130-7887149 | MS.gene20305:intron | 30.0% |
| !! | CTTGCAAGTTATTTTGTTCA+AGG | + | chr5.1:7889266-7889285 | MS.gene20305:intron | 30.0% |
| !! | TGAGCATAACAATTTTAACG+GGG | + | chr5.1:7888612-7888631 | MS.gene20305:CDS | 30.0% |
| !! | TTAACTTTTGAGTCTAAACG+TGG | + | chr5.1:7886701-7886720 | MS.gene20305:intron | 30.0% |
| !!! | TTTTTTTTGACAGAGAAGAG+GGG | + | chr5.1:7887963-7887982 | MS.gene20305:intron | 30.0% |
| AAATATTGCCACTGTACTCT+GGG | + | chr5.1:7889024-7889043 | MS.gene20305:intron | 35.0% | |
| AAGCTTCTACCAAATAAGAG+TGG | + | chr5.1:7890977-7890996 | MS.gene20305:CDS | 35.0% | |
| AAGGATGTAAATATGCGAGT+TGG | + | chr5.1:7889439-7889458 | MS.gene20305:intron | 35.0% | |
| AATTGATTATGGGTCAACTG+GGG | + | chr5.1:7887996-7888015 | MS.gene20305:CDS | 35.0% | |
| ACCATGTTACTGTGTTTACA+GGG | + | chr5.1:7887622-7887641 | MS.gene20305:intron | 35.0% | |
| ACGCGTAGTGGTATTAATTA+AGG | + | chr5.1:7887333-7887352 | MS.gene20305:intron | 35.0% | |
| AGACTTAAATAAGCACAACC+AGG | - | chr5.1:7888869-7888888 | None:intergenic | 35.0% | |
| AGAGTAAAATCACATGTACC+AGG | - | chr5.1:7889397-7889416 | None:intergenic | 35.0% | |
| ATAAGCGTCAAATATGCCAT+AGG | - | chr5.1:7887204-7887223 | None:intergenic | 35.0% | |
| ATAGCAGCTAAACTTTCAGT+TGG | + | chr5.1:7887735-7887754 | MS.gene20305:CDS | 35.0% | |
| ATGGAAAACGCATTACAGAA+TGG | + | chr5.1:7888653-7888672 | MS.gene20305:CDS | 35.0% | |
| ATTGTTTACAAGAGATGGGA+TGG | + | chr5.1:7889186-7889205 | MS.gene20305:CDS | 35.0% | |
| CAAACAACTTATTCAGCCTT+TGG | + | chr5.1:7889783-7889802 | MS.gene20305:CDS | 35.0% | |
| CATAATGCAACTTTCCACAA+TGG | + | chr5.1:7888676-7888695 | MS.gene20305:CDS | 35.0% | |
| CTACGAATATTGCATATGGA+AGG | - | chr5.1:7887762-7887781 | None:intergenic | 35.0% | |
| CTATATCTCCCAACATACTT+AGG | - | chr5.1:7887654-7887673 | None:intergenic | 35.0% | |
| GAAGGTCAAATAATTGCATG+TGG | + | chr5.1:7889996-7890015 | MS.gene20305:CDS | 35.0% | |
| GAATGTTGTCAATTTGCACA+TGG | - | chr5.1:7886935-7886954 | None:intergenic | 35.0% | |
| GAATTGATTATGGGTCAACT+GGG | + | chr5.1:7887995-7888014 | MS.gene20305:CDS | 35.0% | |
| GACTTAAATAAGCACAACCA+GGG | - | chr5.1:7888868-7888887 | None:intergenic | 35.0% | |
| GGTCCAATACTTGATGAAAA+TGG | + | chr5.1:7888469-7888488 | MS.gene20305:CDS | 35.0% | |
| GGTGAAAAACGAGGAATTAA+AGG | - | chr5.1:7886368-7886387 | None:intergenic | 35.0% | |
| GTTGGATAATTTCGTTGTTG+TGG | + | chr5.1:7889968-7889987 | MS.gene20305:CDS | 35.0% | |
| GTTTCTTGAAAGGGAAAACA+TGG | - | chr5.1:7889490-7889509 | None:intergenic | 35.0% | |
| TAACTATGTGAAAGCAGTTG+AGG | + | chr5.1:7888570-7888589 | MS.gene20305:CDS | 35.0% | |
| TACATCCTTACAGATAAGTC+TGG | - | chr5.1:7889428-7889447 | None:intergenic | 35.0% | |
| TGTCTACATCAGATTGTTCA+TGG | + | chr5.1:7889688-7889707 | MS.gene20305:intron | 35.0% | |
| TGTTTATATTTAGGGACGGA+TGG | - | chr5.1:7887181-7887200 | None:intergenic | 35.0% | |
| TTAAGCTGTTTATCCACCTA+TGG | + | chr5.1:7887542-7887561 | MS.gene20305:intron | 35.0% | |
| TTGTTTACAAGAGATGGGAT+GGG | + | chr5.1:7889187-7889206 | MS.gene20305:CDS | 35.0% | |
| TTTATAGCTGCTACAAACGT+TGG | + | chr5.1:7889950-7889969 | MS.gene20305:intron | 35.0% | |
| ! | AGGGCTTTTCAATCATAACA+CGG | + | chr5.1:7887574-7887593 | MS.gene20305:intron | 35.0% |
| ! | ATAGCTTTTCTTCATCACCT+TGG | + | chr5.1:7886882-7886901 | MS.gene20305:CDS | 35.0% |
| ! | ATCTTCCATTTTATCAGGGA+GGG | + | chr5.1:7889110-7889129 | MS.gene20305:intron | 35.0% |
| ! | CAATAACAAAGTGGATTCCA+AGG | - | chr5.1:7886902-7886921 | None:intergenic | 35.0% |
| ! | CATTGTTTCGTGATTTTGAG+CGG | - | chr5.1:7886389-7886408 | None:intergenic | 35.0% |
| ! | CGTCCATTTTCATCAAGTAT+TGG | - | chr5.1:7888475-7888494 | None:intergenic | 35.0% |
| ! | GATAAAGGTTAGTTGGGTTA+AGG | + | chr5.1:7886960-7886979 | MS.gene20305:intron | 35.0% |
| ! | GCAGAGAAAGAAGATTTTTC+TGG | + | chr5.1:7889757-7889776 | MS.gene20305:CDS | 35.0% |
| ! | TACTGTTGGTGGAAACAAAT+TGG | + | chr5.1:7891003-7891022 | MS.gene20305:CDS | 35.0% |
| ! | TCAGTTGATGCATGTTTCTT+TGG | + | chr5.1:7889069-7889088 | MS.gene20305:intron | 35.0% |
| ! | TCTGTAATGCGTTTTCCATT+AGG | - | chr5.1:7888652-7888671 | None:intergenic | 35.0% |
| !! | ATCCACTTTGTTATTGTTCC+TGG | + | chr5.1:7886906-7886925 | MS.gene20305:CDS | 35.0% |
| !! | ATGAAGTGGTGAAGTTGATA+GGG | - | chr5.1:7886285-7886304 | None:intergenic | 35.0% |
| !! | GAATTCAATTCTGGAGTCAA+AGG | - | chr5.1:7886659-7886678 | None:intergenic | 35.0% |
| !! | GCTTTTAAGAACAGTTCAGT+TGG | + | chr5.1:7889354-7889373 | MS.gene20305:intron | 35.0% |
| !! | GGAGTATAAGTTGTTTTCAC+AGG | - | chr5.1:7887160-7887179 | None:intergenic | 35.0% |
| !! | TCATATTCTAAAACGCGTAG+TGG | + | chr5.1:7887321-7887340 | MS.gene20305:intron | 35.0% |
| !! | TGTTGATAGTCCTTCTTCTT+TGG | + | chr5.1:7886561-7886580 | MS.gene20305:intron | 35.0% |
| !!! | AATGGTGTTGGTTTTGAGAA+TGG | + | chr5.1:7888694-7888713 | MS.gene20305:CDS | 35.0% |
| !!! | TATTTTTCAGGCTTCAGCTT+TGG | + | chr5.1:7890502-7890521 | MS.gene20305:intron | 35.0% |
| AACATGGGAATGCTCACAAA+TGG | - | chr5.1:7889474-7889493 | None:intergenic | 40.0% | |
| AACATGTCTGCTTCTTCAAG+AGG | - | chr5.1:7888514-7888533 | None:intergenic | 40.0% | |
| AACGGCTAAGTCGAATGAAT+GGG | + | chr5.1:7888764-7888783 | MS.gene20305:CDS | 40.0% | |
| AAGAGTGGAATTACTGTTGG+TGG | + | chr5.1:7890992-7891011 | MS.gene20305:CDS | 40.0% | |
| ACAACTTATTCAGCCTTTGG+AGG | + | chr5.1:7889786-7889805 | MS.gene20305:CDS | 40.0% | |
| ACATACGCACATGCACAATA+AGG | + | chr5.1:7887513-7887532 | MS.gene20305:intron | 40.0% | |
| AGAATGGGATCCAAAGAAGA+AGG | - | chr5.1:7886574-7886593 | None:intergenic | 40.0% | |
| AGACATGTTAATTCGCAAGC+GGG | + | chr5.1:7888525-7888544 | MS.gene20305:CDS | 40.0% | |
| AGGCCTAAATGACATGGATT+AGG | - | chr5.1:7890719-7890738 | None:intergenic | 40.0% | |
| ATGTGGGAAATGAACATCGT+AGG | - | chr5.1:7889646-7889665 | None:intergenic | 40.0% | |
| ATTCAATACTTCACCAGAGC+TGG | - | chr5.1:7888103-7888122 | None:intergenic | 40.0% | |
| CAAATATTGCCACTGTACTC+TGG | + | chr5.1:7889023-7889042 | MS.gene20305:intron | 40.0% | |
| CAACACACACCACCTATTAT+TGG | - | chr5.1:7888947-7888966 | None:intergenic | 40.0% | |
| CAAGAGGCAAGAAACGAATT+AGG | - | chr5.1:7888498-7888517 | None:intergenic | 40.0% | |
| CACAAACCTGTCAACAAGTT+GGG | - | chr5.1:7890864-7890883 | None:intergenic | 40.0% | |
| CAGACATGTTAATTCGCAAG+CGG | + | chr5.1:7888524-7888543 | MS.gene20305:CDS | 40.0% | |
| CATACGCACATGCACAATAA+GGG | + | chr5.1:7887514-7887533 | MS.gene20305:intron | 40.0% | |
| CCACCTATGGTGAAAAATGA+GGG | + | chr5.1:7887555-7887574 | MS.gene20305:intron | 40.0% | |
| CTACGATAAGCGAGAAGATA+AGG | - | chr5.1:7886508-7886527 | None:intergenic | 40.0% | |
| CTCCCTGATAAAATGGAAGA+TGG | - | chr5.1:7889111-7889130 | None:intergenic | 40.0% | |
| GACCATGTTACTGTGTTTAC+AGG | + | chr5.1:7887621-7887640 | MS.gene20305:intron | 40.0% | |
| GAGATCCAGACTTATCTGTA+AGG | + | chr5.1:7889420-7889439 | MS.gene20305:intron | 40.0% | |
| GCATGCATGATTACATGCAA+GGG | - | chr5.1:7890566-7890585 | None:intergenic | 40.0% | |
| GGAATTGATTATGGGTCAAC+TGG | + | chr5.1:7887994-7888013 | MS.gene20305:CDS | 40.0% | |
| GGTCAAATAATTGCATGTGG+TGG | + | chr5.1:7889999-7890018 | MS.gene20305:CDS | 40.0% | |
| GGTTCAAAGAGTTCACTTGT+TGG | + | chr5.1:7889132-7889151 | MS.gene20305:CDS | 40.0% | |
| GTTAGTGTCAGTGTTACAAG+TGG | + | chr5.1:7887810-7887829 | MS.gene20305:CDS | 40.0% | |
| TAAAGGAGCGAGGTTTGAAT+TGG | - | chr5.1:7886351-7886370 | None:intergenic | 40.0% | |
| TCACAAACCTGTCAACAAGT+TGG | - | chr5.1:7890865-7890884 | None:intergenic | 40.0% | |
| TCCACCTATGGTGAAAAATG+AGG | + | chr5.1:7887554-7887573 | MS.gene20305:intron | 40.0% | |
| TCCCTGTAAACACAGTAACA+TGG | - | chr5.1:7887626-7887645 | None:intergenic | 40.0% | |
| TCTCAAAACCAACACCATTG+TGG | - | chr5.1:7888693-7888712 | None:intergenic | 40.0% | |
| TGCCAGGAACAATAACAAAG+TGG | - | chr5.1:7886911-7886930 | None:intergenic | 40.0% | |
| TGGATAAGGCCTAAATGACA+TGG | - | chr5.1:7890725-7890744 | None:intergenic | 40.0% | |
| TGGTCGGTGGAATTGATTAT+GGG | + | chr5.1:7887986-7888005 | MS.gene20305:CDS | 40.0% | |
| TTACAACACGTACAGCAGAT+TGG | + | chr5.1:7890681-7890700 | MS.gene20305:CDS | 40.0% | |
| TTACATAGCTTACATAGCCG+TGG | + | chr5.1:7889886-7889905 | MS.gene20305:intron | 40.0% | |
| TTCGTTGTTGTGGAAAGAGA+AGG | + | chr5.1:7889978-7889997 | MS.gene20305:CDS | 40.0% | |
| TTCTTTGGATCCCATTCTCA+AGG | + | chr5.1:7886576-7886595 | MS.gene20305:intron | 40.0% | |
| TTGAACAACGAAGGAGTGAA+CGG | + | chr5.1:7886424-7886443 | MS.gene20305:CDS | 40.0% | |
| TTGAGAATGGAGATGGCTTA+GGG | + | chr5.1:7888707-7888726 | MS.gene20305:CDS | 40.0% | |
| TTGTTGGATGGCACTATTAG+TGG | + | chr5.1:7889148-7889167 | MS.gene20305:CDS | 40.0% | |
| TTTGAGAATGGAGATGGCTT+AGG | + | chr5.1:7888706-7888725 | MS.gene20305:CDS | 40.0% | |
| ! | AATTTTCTTGTCAAGTGCCC+TGG | + | chr5.1:7888848-7888867 | MS.gene20305:intron | 40.0% |
| ! | AGTTGGGTTAAGGGTTTGTT+TGG | + | chr5.1:7886970-7886989 | MS.gene20305:intron | 40.0% |
| ! | ATTTTGAGCGGTGAAAAACG+AGG | - | chr5.1:7886377-7886396 | None:intergenic | 40.0% |
| ! | CAAAGAGTTCACTTGTTGGA+TGG | + | chr5.1:7889136-7889155 | MS.gene20305:CDS | 40.0% |
| ! | CATCTTCCATTTTATCAGGG+AGG | + | chr5.1:7889109-7889128 | MS.gene20305:intron | 40.0% |
| ! | GAGGATTGAAGTGAGAGTAT+TGG | - | chr5.1:7886315-7886334 | None:intergenic | 40.0% |
| ! | GATGAAGTGGTGAAGTTGAT+AGG | - | chr5.1:7886286-7886305 | None:intergenic | 40.0% |
| ! | GGCCTAAATGACATGGATTA+GGG | - | chr5.1:7890718-7890737 | None:intergenic | 40.0% |
| ! | GTAATGCGTTTTCCATTAGG+TGG | - | chr5.1:7888649-7888668 | None:intergenic | 40.0% |
| ! | TCCCCTAATCCATGTCATTT+AGG | + | chr5.1:7890713-7890732 | MS.gene20305:intron | 40.0% |
| ! | TCTTCCATTTTATCAGGGAG+GGG | + | chr5.1:7889111-7889130 | MS.gene20305:intron | 40.0% |
| ! | TTATAGAGGCGCGATAAAGA+AGG | - | chr5.1:7886250-7886269 | None:intergenic | 40.0% |
| ! | TTGCTATTGGAGGTCAAGAA+CGG | + | chr5.1:7888746-7888765 | MS.gene20305:CDS | 40.0% |
| ! | TTTGGGAGAGCATGTGAAAT+TGG | + | chr5.1:7887042-7887061 | MS.gene20305:intron | 40.0% |
| ! | TTTTGCAGTGACCTTTACGA+AGG | + | chr5.1:7889724-7889743 | MS.gene20305:intron | 40.0% |
| !! | AACTTGTTGACAGGTTTGTG+AGG | + | chr5.1:7890864-7890883 | MS.gene20305:intron | 40.0% |
| !! | AAGCCCTCATTTTTCACCAT+AGG | - | chr5.1:7887561-7887580 | None:intergenic | 40.0% |
| !! | AGCTGCTATTTCACTTTGCT+CGG | - | chr5.1:7888551-7888570 | None:intergenic | 40.0% |
| !! | ATGATTCCCAACTTGTTGAC+AGG | + | chr5.1:7890855-7890874 | MS.gene20305:intron | 40.0% |
| !! | GAAGTTGATAGGGTTTGGAA+GGG | - | chr5.1:7886275-7886294 | None:intergenic | 40.0% |
| !! | GCCTAAATGACATGGATTAG+GGG | - | chr5.1:7890717-7890736 | None:intergenic | 40.0% |
| !! | TGAAGTTGATAGGGTTTGGA+AGG | - | chr5.1:7886276-7886295 | None:intergenic | 40.0% |
| !!! | GTTGGTTTTGAGAATGGAGA+TGG | + | chr5.1:7888700-7888719 | MS.gene20305:CDS | 40.0% |
| AACGAGGAATTAAAGGAGCG+AGG | - | chr5.1:7886361-7886380 | None:intergenic | 45.0% | |
| AAGAGATGGGATGGGAACAA+TGG | + | chr5.1:7889195-7889214 | MS.gene20305:CDS | 45.0% | |
| ACAAGCTGTTGCAACCTCAT+AGG | - | chr5.1:7888407-7888426 | None:intergenic | 45.0% | |
| AGTTCAGTTGGCATCCTTGT+GGG | + | chr5.1:7889366-7889385 | MS.gene20305:intron | 45.0% | |
| ATAAGGCCAAGCTTCACGAA+GGG | - | chr5.1:7886491-7886510 | None:intergenic | 45.0% | |
| CTGCTGTACGTGTTGTAAGT+AGG | - | chr5.1:7890679-7890698 | None:intergenic | 45.0% | |
| GAACGGCTAAGTCGAATGAA+TGG | + | chr5.1:7888763-7888782 | MS.gene20305:CDS | 45.0% | |
| GAATGGGTACCTGTCAGAAT+TGG | + | chr5.1:7888780-7888799 | MS.gene20305:CDS | 45.0% | |
| GAGAAGAAAGCAGCATCTCT+TGG | + | chr5.1:7890638-7890657 | MS.gene20305:CDS | 45.0% | |
| GCAACTTTCCACAATGGTGT+TGG | + | chr5.1:7888682-7888701 | MS.gene20305:CDS | 45.0% | |
| GCAGTCAAATCTCCACCTAA+TGG | + | chr5.1:7888634-7888653 | MS.gene20305:CDS | 45.0% | |
| GGAGCAAGCCTAAGTATGTT+GGG | + | chr5.1:7887643-7887662 | MS.gene20305:CDS | 45.0% | |
| GGCATGCATGATTACATGCA+AGG | - | chr5.1:7890567-7890586 | None:intergenic | 45.0% | |
| GGTTTGGAAGGGAGTTATAG+AGG | - | chr5.1:7886264-7886283 | None:intergenic | 45.0% | |
| GTGAAAGCAGTTGAGGAAGA+AGG | + | chr5.1:7888577-7888596 | MS.gene20305:CDS | 45.0% | |
| GTGAACGGAATCACTGAAGA+AGG | + | chr5.1:7886439-7886458 | MS.gene20305:CDS | 45.0% | |
| GTGGTCGGTGGAATTGATTA+TGG | + | chr5.1:7887985-7888004 | MS.gene20305:CDS | 45.0% | |
| TCTCCTCAGGGTAAGGAAAA+AGG | - | chr5.1:7890025-7890044 | None:intergenic | 45.0% | |
| TGAACCCCTCCCTGATAAAA+TGG | - | chr5.1:7889118-7889137 | None:intergenic | 45.0% | |
| TGGTAACTTTCTTGCAGCCA+AGG | + | chr5.1:7887830-7887849 | MS.gene20305:CDS | 45.0% | |
| TGTACCAGGAAAAACCCACA+AGG | - | chr5.1:7889383-7889402 | None:intergenic | 45.0% | |
| TTCTTTCTCCAGCACCTATG+AGG | + | chr5.1:7888390-7888409 | MS.gene20305:intron | 45.0% | |
| ! | CATGTGGCATACTGGTTAAG+CGG | + | chr5.1:7889809-7889828 | MS.gene20305:CDS | 45.0% |
| ! | GTATTGGCGAGAAGATGAAG+TGG | - | chr5.1:7886299-7886318 | None:intergenic | 45.0% |
| ! | TTTTTGACAGAGAAGAGGGG+TGG | + | chr5.1:7887966-7887985 | MS.gene20305:intron | 45.0% |
| !! | ACAGTAATGTTTCTGGGTGC+AGG | + | chr5.1:7886857-7886876 | MS.gene20305:intron | 45.0% |
| !! | CCCTCATTTTTCACCATAGG+TGG | - | chr5.1:7887558-7887577 | None:intergenic | 45.0% |
| !! | GTGGTGAAGTTGATAGGGTT+TGG | - | chr5.1:7886280-7886299 | None:intergenic | 45.0% |
| !! | TGCTGCAGCTTTTGTTTGCA+GGG | + | chr5.1:7888804-7888823 | MS.gene20305:CDS | 45.0% |
| !! | AAATAATCATATTAATATTA+AGG | - | chr5.1:7888369-7888388 | None:intergenic | 5.0% |
| ACAGCTTGTGCCTTGGCAAT+TGG | + | chr5.1:7888418-7888437 | MS.gene20305:CDS | 50.0% | |
| AGATGGGATGGGAACAATGG+TGG | + | chr5.1:7889198-7889217 | MS.gene20305:CDS | 50.0% | |
| AGCTTGTGCCTTGGCAATTG+GGG | + | chr5.1:7888420-7888439 | MS.gene20305:CDS | 50.0% | |
| AGTATGCCACATGCCTCCAA+AGG | - | chr5.1:7889802-7889821 | None:intergenic | 50.0% | |
| ATGCGTGAGAGACTTGATGG+CGG | + | chr5.1:7888045-7888064 | MS.gene20305:CDS | 50.0% | |
| CAGCTTGTGCCTTGGCAATT+GGG | + | chr5.1:7888419-7888438 | MS.gene20305:CDS | 50.0% | |
| CAGTTCAGTTGGCATCCTTG+TGG | + | chr5.1:7889365-7889384 | MS.gene20305:intron | 50.0% | |
| CGCAATGCGTTGAACAACGA+AGG | + | chr5.1:7886415-7886434 | MS.gene20305:CDS | 50.0% | |
| GATAAGGCCAAGCTTCACGA+AGG | - | chr5.1:7886492-7886511 | None:intergenic | 50.0% | |
| GCATGCCTTGCCTTGAGAAT+GGG | - | chr5.1:7886589-7886608 | None:intergenic | 50.0% | |
| GGACAGGGAGACAAATTGCT+TGG | + | chr5.1:7890095-7890114 | MS.gene20305:CDS | 50.0% | |
| GGGAGCAAGCCTAAGTATGT+TGG | + | chr5.1:7887642-7887661 | MS.gene20305:intron | 50.0% | |
| GGTTAAGCGGTCTGATGAAG+AGG | + | chr5.1:7889822-7889841 | MS.gene20305:CDS | 50.0% | |
| TATTGCCACTGTACTCTGGG+TGG | + | chr5.1:7889027-7889046 | MS.gene20305:intron | 50.0% | |
| TCAATTTGCACATGGGTGCC+AGG | - | chr5.1:7886927-7886946 | None:intergenic | 50.0% | |
| TGCATGCCTTGCCTTGAGAA+TGG | - | chr5.1:7886590-7886609 | None:intergenic | 50.0% | |
| TGGATCCCATTCTCAAGGCA+AGG | + | chr5.1:7886581-7886600 | MS.gene20305:intron | 50.0% | |
| TGTTGCAACCTCATAGGTGC+TGG | - | chr5.1:7888401-7888420 | None:intergenic | 50.0% | |
| TTCGTTCCCTTCGTGAAGCT+TGG | + | chr5.1:7886482-7886501 | MS.gene20305:CDS | 50.0% | |
| ! | AGCGAGCAAGGCTTTGCTAT+TGG | + | chr5.1:7888733-7888752 | MS.gene20305:CDS | 50.0% |
| ! | ATTCAGCCTTTGGAGGCATG+TGG | + | chr5.1:7889793-7889812 | MS.gene20305:CDS | 50.0% |
| ! | CCTTTCGAGTGCCTTCGTAA+AGG | - | chr5.1:7889738-7889757 | None:intergenic | 50.0% |
| ! | GCATCCTTGTGGGTTTTTCC+TGG | + | chr5.1:7889376-7889395 | MS.gene20305:intron | 50.0% |
| ! | TGGCCTTTTTCCTTACCCTG+AGG | + | chr5.1:7890019-7890038 | MS.gene20305:CDS | 50.0% |
| ! | TTTGGAGGCATGTGGCATAC+TGG | + | chr5.1:7889801-7889820 | MS.gene20305:CDS | 50.0% |
| !! | CCTTTACGAAGGCACTCGAA+AGG | + | chr5.1:7889735-7889754 | MS.gene20305:CDS | 50.0% |
| !! | CTGCTGCAGCTTTTGTTTGC+AGG | + | chr5.1:7888803-7888822 | MS.gene20305:CDS | 50.0% |
| !! | GAGCAAGGCTTTGCTATTGG+AGG | + | chr5.1:7888736-7888755 | MS.gene20305:CDS | 50.0% |
| AACGCTGCAATGTGTGCAGC+AGG | + | chr5.1:7887696-7887715 | MS.gene20305:CDS | 55.0% | |
| AACTTGGGCTACTCCAGCTC+TGG | + | chr5.1:7888087-7888106 | MS.gene20305:CDS | 55.0% | |
| ACCTCTGCACACTTCTCCTC+AGG | - | chr5.1:7890038-7890057 | None:intergenic | 55.0% | |
| AGAGCTGGAGTAGCCCAAGT+TGG | - | chr5.1:7888088-7888107 | None:intergenic | 55.0% | |
| CCAAACCACCCAGAGTACAG+TGG | - | chr5.1:7889035-7889054 | None:intergenic | 55.0% | |
| CCACTGTACTCTGGGTGGTT+TGG | + | chr5.1:7889032-7889051 | MS.gene20305:intron | 55.0% | |
| CCTCTGCACACTTCTCCTCA+GGG | - | chr5.1:7890037-7890056 | None:intergenic | 55.0% | |
| CGCATGCGTGAGAGACTTGA+TGG | + | chr5.1:7888042-7888061 | MS.gene20305:CDS | 55.0% | |
| CTGCAGCAGCCAATTCTGAC+AGG | - | chr5.1:7888792-7888811 | None:intergenic | 55.0% | |
| GATTGCCGTGGTCAAGGACA+GGG | + | chr5.1:7890080-7890099 | MS.gene20305:CDS | 55.0% | |
| GCACACTTCTCCTCAGGGTA+AGG | - | chr5.1:7890032-7890051 | None:intergenic | 55.0% | |
| GCAGTATCTCCTGATTGCCG+TGG | + | chr5.1:7890068-7890087 | MS.gene20305:CDS | 55.0% | |
| GGATGGGAACAATGGTGGCT+AGG | + | chr5.1:7889203-7889222 | MS.gene20305:CDS | 55.0% | |
| GGTTGCAACAGCTTGTGCCT+TGG | + | chr5.1:7888411-7888430 | MS.gene20305:CDS | 55.0% | |
| GTTGACAGGTTTGTGAGGCG+TGG | + | chr5.1:7890869-7890888 | MS.gene20305:intron | 55.0% | |
| TCTCCTGATTGCCGTGGTCA+AGG | + | chr5.1:7890074-7890093 | MS.gene20305:CDS | 55.0% | |
| TGACAGAGAAGAGGGGTGGT+CGG | + | chr5.1:7887970-7887989 | MS.gene20305:intron | 55.0% | |
| TGATTGCCGTGGTCAAGGAC+AGG | + | chr5.1:7890079-7890098 | MS.gene20305:CDS | 55.0% | |
| TGTCCTTGACCACGGCAATC+AGG | - | chr5.1:7890080-7890099 | None:intergenic | 55.0% | |
| TGTCTCCCTGTCCTTGACCA+CGG | - | chr5.1:7890088-7890107 | None:intergenic | 55.0% | |
| TTGTGCCTTGGCAATTGGGG+CGG | + | chr5.1:7888423-7888442 | MS.gene20305:CDS | 55.0% | |
| CTTGTCCGCCCCAATTGCCA+AGG | - | chr5.1:7888431-7888450 | None:intergenic | 60.0% | |
| GCTGCAATGTGTGCAGCAGG+AGG | + | chr5.1:7887699-7887718 | MS.gene20305:CDS | 60.0% | |
| ! | CCCTGAGGAGAAGTGTGCAG+AGG | + | chr5.1:7890034-7890053 | MS.gene20305:CDS | 60.0% |
| ! | GGCTTAGGGACTAGCGAGCA+AGG | + | chr5.1:7888721-7888740 | MS.gene20305:CDS | 60.0% |
| CAGAGAAGAGGGGTGGTCGG+TGG | + | chr5.1:7887973-7887992 | MS.gene20305:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 7886241 | 7891036 | 7886241 | ID=MS.gene20305 |
| chr5.1 | mRNA | 7886241 | 7891036 | 7886241 | ID=MS.gene20305.t1;Parent=MS.gene20305 |
| chr5.1 | exon | 7886241 | 7886543 | 7886241 | ID=MS.gene20305.t1.exon1;Parent=MS.gene20305.t1 |
| chr5.1 | CDS | 7886241 | 7886543 | 7886241 | ID=cds.MS.gene20305.t1;Parent=MS.gene20305.t1 |
| chr5.1 | exon | 7886879 | 7886966 | 7886879 | ID=MS.gene20305.t1.exon2;Parent=MS.gene20305.t1 |
| chr5.1 | CDS | 7886879 | 7886966 | 7886879 | ID=cds.MS.gene20305.t1;Parent=MS.gene20305.t1 |
| chr5.1 | exon | 7887643 | 7887851 | 7887643 | ID=MS.gene20305.t1.exon3;Parent=MS.gene20305.t1 |
| chr5.1 | CDS | 7887643 | 7887851 | 7887643 | ID=cds.MS.gene20305.t1;Parent=MS.gene20305.t1 |
| chr5.1 | exon | 7887976 | 7888127 | 7887976 | ID=MS.gene20305.t1.exon4;Parent=MS.gene20305.t1 |
| chr5.1 | CDS | 7887976 | 7888127 | 7887976 | ID=cds.MS.gene20305.t1;Parent=MS.gene20305.t1 |
| chr5.1 | exon | 7888402 | 7888825 | 7888402 | ID=MS.gene20305.t1.exon5;Parent=MS.gene20305.t1 |
| chr5.1 | CDS | 7888402 | 7888825 | 7888402 | ID=cds.MS.gene20305.t1;Parent=MS.gene20305.t1 |
| chr5.1 | exon | 7889127 | 7889224 | 7889127 | ID=MS.gene20305.t1.exon6;Parent=MS.gene20305.t1 |
| chr5.1 | CDS | 7889127 | 7889224 | 7889127 | ID=cds.MS.gene20305.t1;Parent=MS.gene20305.t1 |
| chr5.1 | exon | 7889732 | 7889843 | 7889732 | ID=MS.gene20305.t1.exon7;Parent=MS.gene20305.t1 |
| chr5.1 | CDS | 7889732 | 7889843 | 7889732 | ID=cds.MS.gene20305.t1;Parent=MS.gene20305.t1 |
| chr5.1 | exon | 7889957 | 7890116 | 7889957 | ID=MS.gene20305.t1.exon8;Parent=MS.gene20305.t1 |
| chr5.1 | CDS | 7889957 | 7890116 | 7889957 | ID=cds.MS.gene20305.t1;Parent=MS.gene20305.t1 |
| chr5.1 | exon | 7890630 | 7890702 | 7890630 | ID=MS.gene20305.t1.exon9;Parent=MS.gene20305.t1 |
| chr5.1 | CDS | 7890630 | 7890702 | 7890630 | ID=cds.MS.gene20305.t1;Parent=MS.gene20305.t1 |
| chr5.1 | exon | 7890877 | 7891036 | 7890877 | ID=MS.gene20305.t1.exon10;Parent=MS.gene20305.t1 |
| chr5.1 | CDS | 7890877 | 7891036 | 7890877 | ID=cds.MS.gene20305.t1;Parent=MS.gene20305.t1 |
| Gene Sequence |
| Protein sequence |
