Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015986.t1 | XP_003588766.1 | 97.2 | 637 | 18 | 0 | 2 | 638 | 7 | 643 | 1.10E-234 | 822.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015986.t1 | Q708Y0 | 63.9 | 638 | 206 | 8 | 2 | 637 | 7 | 622 | 5.1e-119 | 429.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015986.t1 | G7I706 | 97.2 | 637 | 18 | 0 | 2 | 638 | 7 | 643 | 8.1e-235 | 822.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene005189 | MS.gene015986 | PPI |
| MS.gene006075 | MS.gene015986 | PPI |
| MS.gene52620 | MS.gene015986 | PPI |
| MS.gene88847 | MS.gene015986 | PPI |
| MS.gene040998 | MS.gene015986 | PPI |
| MS.gene78077 | MS.gene015986 | PPI |
| MS.gene44056 | MS.gene015986 | PPI |
| MS.gene91547 | MS.gene015986 | PPI |
| MS.gene015986 | MS.gene60765 | PPI |
| MS.gene041002 | MS.gene015986 | PPI |
| MS.gene33917 | MS.gene015986 | PPI |
| MS.gene018833 | MS.gene015986 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015986.t1 | MTR_1g012520 | 97.331 | 637 | 17 | 0 | 2 | 638 | 7 | 643 | 0.0 | 1248 |
| MS.gene015986.t1 | MTR_3g107280 | 66.509 | 636 | 206 | 3 | 4 | 637 | 10 | 640 | 0.0 | 835 |
| MS.gene015986.t1 | MTR_4g114640 | 61.228 | 619 | 230 | 4 | 24 | 638 | 21 | 633 | 0.0 | 707 |
| MS.gene015986.t1 | MTR_4g114650 | 56.908 | 608 | 227 | 4 | 30 | 637 | 26 | 598 | 0.0 | 656 |
| MS.gene015986.t1 | MTR_4g114650 | 56.908 | 608 | 227 | 4 | 30 | 637 | 81 | 653 | 0.0 | 656 |
| MS.gene015986.t1 | MTR_4g114650 | 56.908 | 608 | 227 | 4 | 30 | 637 | 30 | 602 | 0.0 | 656 |
| MS.gene015986.t1 | MTR_2g021030 | 27.090 | 598 | 371 | 17 | 63 | 628 | 11 | 575 | 8.99e-40 | 154 |
| MS.gene015986.t1 | MTR_2g021030 | 26.357 | 387 | 268 | 10 | 140 | 524 | 205 | 576 | 2.29e-28 | 120 |
| MS.gene015986.t1 | MTR_2g021030 | 28.788 | 264 | 179 | 4 | 140 | 403 | 334 | 588 | 1.16e-25 | 112 |
| MS.gene015986.t1 | MTR_2g021030 | 28.182 | 330 | 202 | 8 | 171 | 498 | 281 | 577 | 1.16e-24 | 109 |
| MS.gene015986.t1 | MTR_4g013255 | 27.167 | 600 | 364 | 24 | 32 | 601 | 28 | 584 | 2.90e-31 | 130 |
| MS.gene015986.t1 | MTR_4g013255 | 28.235 | 340 | 206 | 9 | 170 | 508 | 319 | 621 | 8.20e-28 | 119 |
| MS.gene015986.t1 | MTR_4g013255 | 26.347 | 334 | 212 | 11 | 316 | 623 | 77 | 402 | 4.57e-14 | 75.9 |
| MS.gene015986.t1 | MTR_7g112570 | 29.478 | 441 | 274 | 13 | 186 | 601 | 186 | 614 | 6.06e-29 | 122 |
| MS.gene015986.t1 | MTR_7g112570 | 26.898 | 461 | 274 | 14 | 200 | 606 | 92 | 543 | 1.08e-22 | 103 |
| MS.gene015986.t1 | MTR_7g112570 | 29.150 | 247 | 170 | 4 | 171 | 417 | 350 | 591 | 1.12e-20 | 97.1 |
| MS.gene015986.t1 | MTR_7g112570 | 24.272 | 412 | 252 | 12 | 175 | 539 | 277 | 675 | 3.22e-18 | 89.4 |
| MS.gene015986.t1 | MTR_7g112570 | 27.273 | 264 | 179 | 6 | 169 | 428 | 399 | 653 | 6.41e-18 | 88.2 |
| MS.gene015986.t1 | MTR_7g112570 | 28.972 | 428 | 269 | 11 | 186 | 588 | 186 | 603 | 7.68e-29 | 122 |
| MS.gene015986.t1 | MTR_7g112570 | 26.898 | 461 | 274 | 14 | 200 | 606 | 92 | 543 | 8.39e-23 | 103 |
| MS.gene015986.t1 | MTR_7g112570 | 29.150 | 247 | 170 | 4 | 171 | 417 | 350 | 591 | 9.74e-21 | 97.1 |
| MS.gene015986.t1 | MTR_7g112570 | 24.706 | 340 | 212 | 9 | 171 | 479 | 273 | 599 | 3.36e-17 | 85.9 |
| MS.gene015986.t1 | MTR_7g112570 | 29.224 | 219 | 123 | 5 | 169 | 386 | 399 | 586 | 2.12e-16 | 83.2 |
| MS.gene015986.t1 | MTR_7g112570 | 29.009 | 424 | 266 | 11 | 186 | 584 | 186 | 599 | 9.53e-29 | 121 |
| MS.gene015986.t1 | MTR_7g112570 | 26.898 | 461 | 274 | 14 | 200 | 606 | 92 | 543 | 8.73e-23 | 103 |
| MS.gene015986.t1 | MTR_7g112570 | 29.150 | 247 | 170 | 4 | 171 | 417 | 350 | 591 | 8.71e-21 | 97.1 |
| MS.gene015986.t1 | MTR_7g112570 | 24.706 | 340 | 212 | 9 | 171 | 479 | 273 | 599 | 3.12e-17 | 85.9 |
| MS.gene015986.t1 | MTR_7g112570 | 29.224 | 219 | 123 | 5 | 169 | 386 | 399 | 586 | 2.33e-16 | 83.2 |
| MS.gene015986.t1 | MTR_1g114610 | 27.177 | 379 | 254 | 8 | 61 | 431 | 18 | 382 | 9.31e-28 | 116 |
| MS.gene015986.t1 | MTR_1g114610 | 28.968 | 252 | 171 | 4 | 137 | 386 | 145 | 390 | 3.64e-20 | 94.0 |
| MS.gene015986.t1 | MTR_1g114610 | 25.507 | 345 | 219 | 9 | 228 | 564 | 68 | 382 | 1.66e-19 | 91.7 |
| MS.gene015986.t1 | MTR_1g114610 | 25.143 | 350 | 195 | 7 | 197 | 513 | 95 | 410 | 3.11e-19 | 90.9 |
| MS.gene015986.t1 | MTR_1g114610 | 28.571 | 196 | 136 | 4 | 433 | 627 | 94 | 286 | 4.22e-13 | 72.0 |
| MS.gene015986.t1 | MTR_2g021030 | 30.796 | 289 | 192 | 7 | 171 | 458 | 153 | 434 | 2.40e-27 | 115 |
| MS.gene015986.t1 | MTR_2g021030 | 28.523 | 298 | 157 | 7 | 223 | 495 | 127 | 393 | 5.14e-21 | 97.1 |
| MS.gene015986.t1 | MTR_2g021030 | 34.028 | 144 | 89 | 1 | 140 | 283 | 282 | 419 | 1.62e-15 | 79.7 |
| MS.gene015986.t1 | MTR_2g021030 | 26.316 | 247 | 150 | 5 | 381 | 627 | 127 | 341 | 1.87e-12 | 70.1 |
| MS.gene015986.t1 | MTR_8g028140 | 27.968 | 379 | 242 | 7 | 48 | 412 | 7 | 368 | 3.78e-25 | 108 |
| MS.gene015986.t1 | MTR_8g028140 | 28.000 | 300 | 185 | 8 | 355 | 630 | 82 | 374 | 5.65e-17 | 84.0 |
| MS.gene015986.t1 | MTR_8g028140 | 30.224 | 268 | 165 | 3 | 156 | 412 | 32 | 288 | 1.69e-22 | 99.0 |
| MS.gene015986.t1 | MTR_8g028140 | 28.322 | 286 | 174 | 8 | 369 | 630 | 16 | 294 | 5.60e-17 | 82.8 |
| MS.gene015986.t1 | MTR_4g019320 | 21.256 | 414 | 282 | 9 | 175 | 564 | 122 | 515 | 3.45e-19 | 92.0 |
| MS.gene015986.t1 | MTR_3g088895 | 29.474 | 190 | 107 | 2 | 205 | 394 | 123 | 285 | 4.02e-19 | 90.1 |
| MS.gene015986.t1 | MTR_3g088895 | 26.341 | 205 | 133 | 4 | 171 | 372 | 141 | 330 | 1.55e-13 | 73.2 |
| MS.gene015986.t1 | MTR_1g029500 | 26.577 | 222 | 124 | 3 | 199 | 408 | 104 | 298 | 2.97e-18 | 87.0 |
| MS.gene015986.t1 | MTR_1g029500 | 27.751 | 209 | 140 | 2 | 175 | 372 | 106 | 314 | 5.12e-15 | 77.4 |
| MS.gene015986.t1 | MTR_1g029500 | 26.368 | 201 | 109 | 3 | 138 | 302 | 127 | 324 | 4.37e-11 | 65.5 |
| MS.gene015986.t1 | MTR_1g015480 | 25.424 | 413 | 238 | 15 | 183 | 577 | 157 | 517 | 3.21e-18 | 89.4 |
| MS.gene015986.t1 | MTR_1g015450 | 25.366 | 410 | 242 | 15 | 183 | 577 | 339 | 699 | 8.13e-18 | 88.2 |
| MS.gene015986.t1 | MTR_1g015450 | 27.129 | 505 | 265 | 20 | 169 | 625 | 490 | 939 | 8.75e-11 | 65.9 |
| MS.gene015986.t1 | MTR_4g009030 | 23.618 | 597 | 352 | 17 | 60 | 604 | 3 | 547 | 2.11e-17 | 86.3 |
| MS.gene015986.t1 | MTR_1g054625 | 29.268 | 205 | 139 | 5 | 166 | 369 | 20 | 219 | 4.04e-15 | 76.3 |
| MS.gene015986.t1 | MTR_1g054625 | 22.526 | 293 | 167 | 4 | 237 | 528 | 13 | 246 | 2.74e-14 | 73.6 |
| MS.gene015986.t1 | MTR_1g054625 | 22.508 | 311 | 177 | 5 | 223 | 528 | 92 | 343 | 6.66e-15 | 77.0 |
| MS.gene015986.t1 | MTR_1g054625 | 29.208 | 202 | 137 | 5 | 169 | 369 | 120 | 316 | 7.78e-15 | 76.6 |
| MS.gene015986.t1 | MTR_1g054625 | 27.907 | 301 | 196 | 12 | 331 | 629 | 58 | 339 | 2.12e-14 | 75.5 |
| MS.gene015986.t1 | MTR_1g054625 | 25.820 | 244 | 169 | 7 | 314 | 553 | 79 | 314 | 2.30e-14 | 75.5 |
| MS.gene015986.t1 | MTR_1g054625 | 24.275 | 276 | 195 | 6 | 186 | 452 | 81 | 351 | 4.58e-12 | 68.2 |
| MS.gene015986.t1 | MTR_5g075860 | 22.660 | 406 | 264 | 9 | 211 | 604 | 175 | 542 | 1.07e-13 | 74.7 |
| MS.gene015986.t1 | MTR_4g036815 | 25.562 | 356 | 201 | 13 | 197 | 550 | 189 | 482 | 6.14e-13 | 72.0 |
| MS.gene015986.t1 | MTR_4g094932 | 24.726 | 457 | 278 | 16 | 61 | 501 | 44 | 450 | 2.02e-12 | 70.5 |
| MS.gene015986.t1 | MTR_4g130620 | 30.726 | 179 | 108 | 6 | 224 | 400 | 102 | 266 | 2.38e-12 | 68.6 |
| MS.gene015986.t1 | MTR_5g095830 | 22.128 | 470 | 299 | 14 | 171 | 604 | 145 | 583 | 2.42e-12 | 70.5 |
| MS.gene015986.t1 | MTR_1g018790 | 23.729 | 295 | 199 | 9 | 196 | 479 | 137 | 416 | 6.69e-12 | 68.9 |
| MS.gene015986.t1 | MTR_4g125440 | 25.090 | 279 | 195 | 8 | 341 | 613 | 397 | 667 | 1.80e-11 | 67.8 |
| MS.gene015986.t1 | MTR_1g114010 | 23.529 | 238 | 150 | 4 | 169 | 404 | 136 | 343 | 2.32e-11 | 67.0 |
| MS.gene015986.t1 | MTR_1g114010 | 23.529 | 238 | 150 | 4 | 169 | 404 | 215 | 422 | 2.42e-11 | 67.0 |
| MS.gene015986.t1 | MTR_1g114010 | 23.529 | 238 | 150 | 4 | 169 | 404 | 145 | 352 | 2.56e-11 | 66.6 |
| MS.gene015986.t1 | MTR_1g114010 | 23.529 | 238 | 150 | 4 | 169 | 404 | 296 | 503 | 4.11e-11 | 66.6 |
| MS.gene015986.t1 | MTR_4g021765 | 28.169 | 142 | 80 | 1 | 167 | 286 | 165 | 306 | 4.38e-11 | 65.1 |
| MS.gene015986.t1 | MTR_3g006050 | 22.571 | 350 | 217 | 10 | 197 | 536 | 192 | 497 | 4.72e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015986.t1 | AT2G25490 | 60.625 | 640 | 231 | 8 | 2 | 638 | 7 | 628 | 0.0 | 756 |
| MS.gene015986.t1 | AT5G25350 | 58.621 | 638 | 240 | 8 | 2 | 637 | 7 | 622 | 0.0 | 692 |
| MS.gene015986.t1 | AT4G15475 | 30.562 | 445 | 293 | 13 | 195 | 637 | 125 | 555 | 1.13e-43 | 166 |
| MS.gene015986.t1 | AT4G15475 | 27.063 | 606 | 361 | 16 | 63 | 628 | 11 | 575 | 4.55e-39 | 152 |
| MS.gene015986.t1 | AT4G15475 | 29.114 | 316 | 213 | 5 | 140 | 455 | 282 | 586 | 6.83e-32 | 131 |
| MS.gene015986.t1 | AT4G15475 | 26.166 | 386 | 245 | 10 | 140 | 498 | 205 | 577 | 6.61e-26 | 113 |
| MS.gene015986.t1 | AT5G27920 | 26.365 | 531 | 330 | 16 | 147 | 626 | 82 | 602 | 3.26e-31 | 129 |
| MS.gene015986.t1 | AT5G27920 | 23.385 | 449 | 259 | 14 | 234 | 604 | 63 | 504 | 1.03e-16 | 84.3 |
| MS.gene015986.t1 | AT5G23340 | 26.780 | 295 | 185 | 4 | 301 | 594 | 85 | 349 | 2.07e-25 | 109 |
| MS.gene015986.t1 | AT5G23340 | 23.967 | 363 | 266 | 5 | 61 | 421 | 8 | 362 | 1.82e-23 | 103 |
| MS.gene015986.t1 | AT5G23340 | 25.281 | 356 | 220 | 8 | 170 | 516 | 84 | 402 | 1.06e-18 | 89.4 |
| MS.gene015986.t1 | AT5G23340 | 22.302 | 278 | 160 | 4 | 354 | 630 | 84 | 306 | 2.81e-12 | 69.3 |
| MS.gene015986.t1 | AT5G01720 | 26.271 | 354 | 222 | 8 | 170 | 495 | 238 | 580 | 2.05e-23 | 105 |
| MS.gene015986.t1 | AT5G01720 | 27.397 | 511 | 284 | 16 | 171 | 605 | 85 | 584 | 4.90e-23 | 104 |
| MS.gene015986.t1 | AT5G01720 | 27.301 | 326 | 227 | 9 | 302 | 627 | 61 | 376 | 1.47e-12 | 71.2 |
| MS.gene015986.t1 | AT5G01720 | 24.675 | 385 | 236 | 12 | 221 | 570 | 58 | 423 | 5.73e-12 | 69.3 |
| MS.gene015986.t1 | AT1G21410 | 25.305 | 328 | 161 | 8 | 199 | 526 | 106 | 349 | 1.21e-19 | 91.7 |
| MS.gene015986.t1 | AT1G21410 | 31.214 | 173 | 114 | 5 | 459 | 629 | 102 | 271 | 3.20e-14 | 75.1 |
| MS.gene015986.t1 | AT1G21410 | 23.256 | 215 | 148 | 2 | 175 | 372 | 108 | 322 | 2.70e-13 | 72.4 |
| MS.gene015986.t1 | AT1G21410 | 25.305 | 328 | 161 | 8 | 199 | 526 | 106 | 349 | 1.21e-19 | 91.7 |
| MS.gene015986.t1 | AT1G21410 | 31.214 | 173 | 114 | 5 | 459 | 629 | 102 | 271 | 3.20e-14 | 75.1 |
| MS.gene015986.t1 | AT1G21410 | 23.256 | 215 | 148 | 2 | 175 | 372 | 108 | 322 | 2.70e-13 | 72.4 |
| MS.gene015986.t1 | AT1G77000 | 29.592 | 196 | 111 | 2 | 199 | 394 | 106 | 274 | 3.91e-19 | 90.1 |
| MS.gene015986.t1 | AT1G77000 | 25.641 | 234 | 140 | 4 | 175 | 374 | 108 | 341 | 5.07e-15 | 77.4 |
| MS.gene015986.t1 | AT1G77000 | 29.592 | 196 | 111 | 2 | 199 | 394 | 106 | 274 | 3.91e-19 | 90.1 |
| MS.gene015986.t1 | AT1G77000 | 25.641 | 234 | 140 | 4 | 175 | 374 | 108 | 341 | 5.07e-15 | 77.4 |
| MS.gene015986.t1 | AT4G33210 | 23.830 | 470 | 265 | 16 | 126 | 565 | 289 | 695 | 5.72e-17 | 85.9 |
| MS.gene015986.t1 | AT3G07550 | 24.090 | 357 | 259 | 6 | 57 | 408 | 12 | 361 | 2.16e-16 | 82.0 |
| MS.gene015986.t1 | AT3G07550 | 24.367 | 316 | 196 | 8 | 188 | 495 | 62 | 342 | 8.77e-13 | 70.9 |
| MS.gene015986.t1 | AT3G07550 | 28.094 | 299 | 169 | 9 | 343 | 636 | 118 | 375 | 8.21e-12 | 68.2 |
| MS.gene015986.t1 | AT3G07550 | 24.090 | 357 | 259 | 6 | 57 | 408 | 12 | 361 | 2.16e-16 | 82.0 |
| MS.gene015986.t1 | AT3G07550 | 24.367 | 316 | 196 | 8 | 188 | 495 | 62 | 342 | 8.77e-13 | 70.9 |
| MS.gene015986.t1 | AT3G07550 | 28.094 | 299 | 169 | 9 | 343 | 636 | 118 | 375 | 8.21e-12 | 68.2 |
| MS.gene015986.t1 | AT3G58530 | 25.095 | 263 | 155 | 9 | 175 | 434 | 128 | 351 | 6.83e-16 | 80.1 |
| MS.gene015986.t1 | AT3G58530 | 21.283 | 343 | 207 | 6 | 188 | 525 | 58 | 342 | 4.04e-15 | 77.8 |
| MS.gene015986.t1 | AT3G58530 | 27.090 | 299 | 177 | 10 | 342 | 633 | 81 | 345 | 1.24e-14 | 76.3 |
| MS.gene015986.t1 | AT3G07550 | 23.864 | 352 | 239 | 7 | 57 | 408 | 12 | 334 | 5.99e-15 | 77.4 |
| MS.gene015986.t1 | AT3G07550 | 24.042 | 287 | 182 | 7 | 210 | 495 | 64 | 315 | 1.84e-12 | 69.7 |
| MS.gene015986.t1 | AT3G07550 | 28.094 | 299 | 169 | 9 | 343 | 636 | 91 | 348 | 5.22e-12 | 68.6 |
| MS.gene015986.t1 | AT1G55590 | 24.889 | 225 | 164 | 4 | 167 | 389 | 294 | 515 | 4.54e-14 | 75.9 |
| MS.gene015986.t1 | AT2G06040 | 24.911 | 281 | 200 | 6 | 332 | 605 | 473 | 749 | 2.27e-13 | 73.9 |
| MS.gene015986.t1 | AT1G47056 | 24.512 | 461 | 290 | 17 | 36 | 487 | 15 | 426 | 2.46e-13 | 73.2 |
| MS.gene015986.t1 | AT1G47056 | 25.208 | 361 | 198 | 12 | 222 | 576 | 116 | 410 | 6.68e-12 | 68.9 |
| MS.gene015986.t1 | AT4G07400 | 24.561 | 456 | 290 | 18 | 60 | 510 | 74 | 480 | 5.78e-13 | 72.4 |
| MS.gene015986.t1 | AT1G77000 | 26.630 | 184 | 82 | 3 | 199 | 382 | 106 | 236 | 5.96e-13 | 69.7 |
| MS.gene015986.t1 | AT1G77000 | 32.727 | 110 | 73 | 1 | 175 | 283 | 108 | 217 | 7.59e-11 | 63.5 |
| MS.gene015986.t1 | AT1G77000 | 26.630 | 184 | 82 | 3 | 199 | 382 | 106 | 236 | 5.96e-13 | 69.7 |
| MS.gene015986.t1 | AT1G77000 | 32.727 | 110 | 73 | 1 | 175 | 283 | 108 | 217 | 7.59e-11 | 63.5 |
| MS.gene015986.t1 | AT3G50080 | 24.222 | 450 | 259 | 16 | 52 | 495 | 33 | 406 | 1.45e-12 | 70.9 |
| MS.gene015986.t1 | AT1G80630 | 22.886 | 402 | 237 | 9 | 195 | 564 | 148 | 508 | 3.98e-12 | 69.7 |
| MS.gene015986.t1 | AT2G17020 | 23.729 | 531 | 290 | 21 | 178 | 603 | 45 | 565 | 1.29e-11 | 68.2 |
| MS.gene015986.t1 | AT5G67250 | 25.325 | 308 | 208 | 11 | 196 | 495 | 119 | 412 | 1.63e-11 | 67.8 |
| MS.gene015986.t1 | AT1G80570 | 24.462 | 372 | 211 | 13 | 301 | 628 | 97 | 442 | 7.86e-11 | 65.5 |
| MS.gene015986.t1 | AT1G80570 | 25.146 | 342 | 187 | 12 | 301 | 598 | 84 | 400 | 9.14e-11 | 65.1 |
| MS.gene015986.t1 | AT1G80570 | 25.146 | 342 | 187 | 12 | 301 | 598 | 84 | 400 | 9.14e-11 | 65.1 |
Find 160 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTAAAGTCTTTCTCTTTA+TGG | 0.012962 | 1.4:-8540983 | MS.gene015986:CDS |
| TGCCACAGAATTACCCAATT+TGG | 0.171018 | 1.4:-8540327 | MS.gene015986:CDS |
| CTTACCCGCTTTGAGAAAAT+TGG | 0.171059 | 1.4:-8539746 | MS.gene015986:CDS |
| GATCTCTCTCTAGCTGTTAT+TGG | 0.220084 | 1.4:-8540630 | MS.gene015986:CDS |
| TAACATTTGGGAGGAAATTA+AGG | 0.226363 | 1.4:+8540577 | None:intergenic |
| ATAGATATAACCTTAAGATT+TGG | 0.265371 | 1.4:+8540753 | None:intergenic |
| CTTCAACAAGTTGAATTAAC+TGG | 0.274879 | 1.4:-8540111 | MS.gene015986:CDS |
| CCTTCTTTCCTTCCAAGCTT+CGG | 0.280846 | 1.4:+8541144 | None:intergenic |
| TGAGAGAGGCTTCTGGGTTA+TGG | 0.281774 | 1.4:-8540553 | MS.gene015986:CDS |
| ATCTGTAACTGCCCTGGATT+TGG | 0.285015 | 1.4:-8540174 | MS.gene015986:CDS |
| CAGGAAGAAATTTGCTTCCT+TGG | 0.285276 | 1.4:+8541490 | None:intergenic |
| TTGTGTGCGATCTCCGATTC+CGG | 0.288491 | 1.4:-8539850 | MS.gene015986:CDS |
| CTTCTTTCCTTCCAAGCTTC+GGG | 0.291790 | 1.4:+8541145 | None:intergenic |
| CTCAAATGACGAGAATAAAA+TGG | 0.294170 | 1.4:-8541207 | MS.gene015986:CDS |
| ACTGCATCACGAGGAGGATT+AGG | 0.301726 | 1.4:-8541086 | MS.gene015986:CDS |
| AAAATTGGGCCACACCCTTT+TGG | 0.309297 | 1.4:-8539731 | MS.gene015986:CDS |
| TTTCTATGGTGAGCTGCTTT+GGG | 0.310632 | 1.4:-8540260 | MS.gene015986:CDS |
| TGTGGCACTCTTCCAATTGT+AGG | 0.329715 | 1.4:+8540343 | None:intergenic |
| TCAAGGACTGTGCCGGTGTT+GGG | 0.330559 | 1.4:-8540731 | MS.gene015986:CDS |
| AGATGCTTGTTGAACATCTT+TGG | 0.338078 | 1.4:-8539663 | MS.gene015986:CDS |
| TAGATATAACCTTAAGATTT+GGG | 0.344478 | 1.4:+8540754 | None:intergenic |
| GCCACAGAATTACCCAATTT+GGG | 0.348800 | 1.4:-8540326 | MS.gene015986:CDS |
| GTTGAATTAACTGGACTTAA+GGG | 0.349439 | 1.4:-8540102 | MS.gene015986:CDS |
| AGGAAGAAATTTGCTTCCTT+GGG | 0.350453 | 1.4:+8541491 | None:intergenic |
| GCAAATTTCTTCCTGTCTCT+TGG | 0.351075 | 1.4:-8541482 | MS.gene015986:CDS |
| CTCGAAATTCTGAACCTTGA+AGG | 0.357149 | 1.4:-8539949 | MS.gene015986:CDS |
| ATGTTAGTGAGAGAGGCTTC+TGG | 0.357800 | 1.4:-8540560 | MS.gene015986:CDS |
| AAGCCTCTCTCACTAACATT+TGG | 0.362156 | 1.4:+8540564 | None:intergenic |
| AGTTGAATTAACTGGACTTA+AGG | 0.362492 | 1.4:-8540103 | MS.gene015986:CDS |
| GTTTCTTCTGTTGGTGATGA+AGG | 0.367259 | 1.4:-8540957 | MS.gene015986:CDS |
| TTATGGAATGTTTCTTCTGT+TGG | 0.375011 | 1.4:-8540966 | MS.gene015986:CDS |
| GAGAGAGGCTTCTGGGTTAT+GGG | 0.375727 | 1.4:-8540552 | MS.gene015986:CDS |
| GCACAATCGTTTATGTTCTC+AGG | 0.383637 | 1.4:-8541548 | None:intergenic |
| GCCTCTTTGAGATCTTTAGA+AGG | 0.392355 | 1.4:-8541337 | MS.gene015986:CDS |
| TGGGTTATGGGAAATGCTAA+TGG | 0.394159 | 1.4:-8540540 | MS.gene015986:CDS |
| GTCAGGCTGCACTTTGGTTA+CGG | 0.399322 | 1.4:-8539776 | MS.gene015986:CDS |
| CCCTGGTCAATCTGCATGGT+TGG | 0.402559 | 1.4:-8539975 | MS.gene015986:CDS |
| ATCCATTAGCGATCTCAATA+AGG | 0.403036 | 1.4:+8540934 | None:intergenic |
| GAAAGTGACTGTGAAGAGTT+TGG | 0.407597 | 1.4:-8541185 | MS.gene015986:CDS |
| TGTGTGCGATCTCCGATTCC+GGG | 0.408544 | 1.4:-8539849 | MS.gene015986:CDS |
| ATCACTTGAAAGCCTACAAT+TGG | 0.412655 | 1.4:-8540355 | MS.gene015986:CDS |
| CCAAAGAAGTCGAAGAAAAC+AGG | 0.414246 | 1.4:+8540691 | None:intergenic |
| CTGCATCACGAGGAGGATTA+GGG | 0.415640 | 1.4:-8541085 | MS.gene015986:CDS |
| AGCCTCTCTCACTAACATTT+GGG | 0.422860 | 1.4:+8540565 | None:intergenic |
| GTGTGCCAGGGCTGCTATCC+CGG | 0.423492 | 1.4:+8539831 | None:intergenic |
| CTGCTTTGGGATCAAGGATC+TGG | 0.424806 | 1.4:-8540247 | MS.gene015986:CDS |
| CTTAAGGGAGTCACAGATGC+TGG | 0.425211 | 1.4:-8540087 | MS.gene015986:CDS |
| GGCCTTATTGAGATCGCTAA+TGG | 0.425507 | 1.4:-8540936 | MS.gene015986:CDS |
| CATCAAGATCACAAAGCAAT+TGG | 0.425806 | 1.4:+8539878 | None:intergenic |
| ATCTCAAAGAGGCACTCATC+TGG | 0.426649 | 1.4:+8541347 | None:intergenic |
| AAAGTTCTGCCCAAATCTTA+AGG | 0.427807 | 1.4:-8540763 | MS.gene015986:CDS |
| CTACAGATTCTTTCTCTGTC+AGG | 0.430438 | 1.4:-8539793 | MS.gene015986:CDS |
| CGATTCCGGGATAGCAGCCC+TGG | 0.432829 | 1.4:-8539836 | MS.gene015986:CDS |
| TGTTAGTGAGAGAGGCTTCT+GGG | 0.434709 | 1.4:-8540559 | MS.gene015986:CDS |
| AAAGCCTTGTCGGAAATTGC+AGG | 0.435432 | 1.4:+8540876 | None:intergenic |
| AGGGTAGCGTTGCCAAATCC+AGG | 0.436782 | 1.4:+8540162 | None:intergenic |
| CATTCTCCATCGAAAACAAA+TGG | 0.441047 | 1.4:+8541407 | None:intergenic |
| TTACCCGCTTTGAGAAAATT+GGG | 0.441746 | 1.4:-8539745 | MS.gene015986:CDS |
| TAACTGTGGTGCAAAATTGA+AGG | 0.443191 | 1.4:-8540286 | MS.gene015986:CDS |
| CAGAAGCATAAGCCAGCGTT+TGG | 0.444467 | 1.4:+8541274 | None:intergenic |
| GGTGAGCTGCTTTGGGATCA+AGG | 0.449178 | 1.4:-8540253 | MS.gene015986:CDS |
| GCACTCCTTTCTTCACCAAC+AGG | 0.449873 | 1.4:+8541311 | None:intergenic |
| GCTGGATATTTAGTCCCAAA+AGG | 0.450825 | 1.4:+8539716 | None:intergenic |
| ATCAAGGACTGTGCCGGTGT+TGG | 0.452196 | 1.4:-8540732 | MS.gene015986:CDS |
| AACTTTAACAAGACCAGCCT+CGG | 0.457238 | 1.4:+8540041 | None:intergenic |
| CTAGCTGTTATTGGACACTA+TGG | 0.460329 | 1.4:-8540621 | MS.gene015986:CDS |
| TTCAAGTGATATAGCAGCCT+TGG | 0.460685 | 1.4:+8540368 | None:intergenic |
| GGGATACCTTTCCCGAAGCT+TGG | 0.461300 | 1.4:-8541156 | MS.gene015986:CDS |
| CAACTTGAGGGCCAAGAGAC+AGG | 0.463141 | 1.4:+8541471 | None:intergenic |
| TGTGCCGGTGTTGGGGATCA+AGG | 0.466975 | 1.4:-8540723 | MS.gene015986:CDS |
| TTATCGATCTGTAACTGCCC+TGG | 0.467205 | 1.4:-8540180 | MS.gene015986:CDS |
| CCGAAGCTTGGAAGGAAAGA+AGG | 0.469354 | 1.4:-8541144 | MS.gene015986:CDS |
| AATGATAACTCGGTCAGATT+CGG | 0.472690 | 1.4:+8540831 | None:intergenic |
| CTCCCAAATGTTAGTGAGAG+AGG | 0.473423 | 1.4:-8540567 | MS.gene015986:CDS |
| CGCGTTCTGAGTTGCTTCCA+CGG | 0.473495 | 1.4:+8541051 | None:intergenic |
| AACTGCGGTTAAAGCCTTGT+CGG | 0.474915 | 1.4:+8540866 | None:intergenic |
| TTGCTTGAGAGCTCCGAGGC+TGG | 0.476623 | 1.4:-8540054 | MS.gene015986:CDS |
| CTGCTTGTGTTTCCAAACGC+TGG | 0.478903 | 1.4:-8541286 | MS.gene015986:CDS |
| TGGGATCAAGGATCTGGACT+TGG | 0.479690 | 1.4:-8540241 | MS.gene015986:CDS |
| AGACTTGCTGCTATTGCAGT+TGG | 0.480536 | 1.4:-8541110 | MS.gene015986:CDS |
| CAGGGCTGCTATCCCGGAAT+CGG | 0.488751 | 1.4:+8539837 | None:intergenic |
| GCAGAGGAGTAACCGATGTT+GGG | 0.492742 | 1.4:-8540482 | MS.gene015986:CDS |
| AACGCTACCCTTTCTGTACT+CGG | 0.496998 | 1.4:-8540150 | MS.gene015986:CDS |
| TTCTCTGTCAGGCTGCACTT+TGG | 0.500531 | 1.4:-8539782 | MS.gene015986:CDS |
| CAGGGATGAAACTACTTTGT+CGG | 0.506121 | 1.4:+8539993 | None:intergenic |
| TCTTAAGGTTATATCTATCA+AGG | 0.507799 | 1.4:-8540748 | MS.gene015986:CDS |
| TGCAGAGGAGTAACCGATGT+TGG | 0.509560 | 1.4:-8540483 | MS.gene015986:CDS |
| GCCTCGGAGCTCTCAAGCAA+TGG | 0.512849 | 1.4:+8540057 | None:intergenic |
| GGTTGCCTGTTGGTGAAGAA+AGG | 0.514240 | 1.4:-8541316 | MS.gene015986:CDS |
| AGTGATTCACAAGGAGATAC+AGG | 0.516560 | 1.4:+8540210 | None:intergenic |
| GACTTCTTTGGTTCTGACAA+AGG | 0.516837 | 1.4:-8540679 | MS.gene015986:CDS |
| TGCTGATTGAATTGCAATGC+TGG | 0.518629 | 1.4:+8539698 | None:intergenic |
| AGACCTTCATTGCGAATGCT+AGG | 0.519816 | 1.4:+8540798 | None:intergenic |
| TGTCCTAGCATTCGCAATGA+AGG | 0.520385 | 1.4:-8540801 | MS.gene015986:CDS |
| GAACGCGGCGTGACAACTCT+AGG | 0.525236 | 1.4:-8541035 | MS.gene015986:CDS |
| TACCTTTCCCGAAGCTTGGA+AGG | 0.529475 | 1.4:-8541152 | MS.gene015986:CDS |
| CAAGGACTGTGCCGGTGTTG+GGG | 0.530233 | 1.4:-8540730 | MS.gene015986:CDS |
| TGCTTGTTGAACATCTTTGG+AGG | 0.531336 | 1.4:-8539660 | MS.gene015986:CDS |
| TTCCTTCCAAGCTTCGGGAA+AGG | 0.533717 | 1.4:+8541150 | None:intergenic |
| CTGGATATTTAGTCCCAAAA+GGG | 0.534654 | 1.4:+8539717 | None:intergenic |
| TCCAACCATGCAGATTGACC+AGG | 0.536554 | 1.4:+8539974 | None:intergenic |
| GGTCTCAAAGCAGTTGCTAG+TGG | 0.537588 | 1.4:-8541014 | MS.gene015986:CDS |
| AACATCGGTTACTCCTCTGC+AGG | 0.539479 | 1.4:+8540485 | None:intergenic |
| AAAGGTGAAGCTTCAAGCAC+TGG | 0.541994 | 1.4:-8540661 | MS.gene015986:CDS |
| AGCTAGAGAGAGATCAGAAA+CGG | 0.542100 | 1.4:+8540638 | None:intergenic |
| GGGATTGAAGCTGTTGGAAA+GGG | 0.549164 | 1.4:-8540462 | MS.gene015986:CDS |
| TCATCCCTGGTCAATCTGCA+TGG | 0.552095 | 1.4:-8539979 | MS.gene015986:CDS |
| GTTGGGGATCAAGGAATCGC+TGG | 0.553667 | 1.4:-8540714 | MS.gene015986:CDS |
| TAAATCTTGCAGTTCAGGAA+AGG | 0.554597 | 1.4:+8539629 | None:intergenic |
| CTGTGAAGAGTTTGGAGGTG+AGG | 0.561043 | 1.4:-8541177 | MS.gene015986:CDS |
| GATAGTAGACATCAACTTGA+GGG | 0.562773 | 1.4:+8541459 | None:intergenic |
| CGACAAAGTAGTTTCATCCC+TGG | 0.562846 | 1.4:-8539992 | MS.gene015986:CDS |
| TGTGAAGAGTTTGGAGGTGA+GGG | 0.567927 | 1.4:-8541176 | MS.gene015986:CDS |
| AATTCAACTTGTTGAAGCTG+AGG | 0.567931 | 1.4:+8540117 | None:intergenic |
| GCTGCACTTTGGTTACGGAC+AGG | 0.573743 | 1.4:-8539771 | MS.gene015986:CDS |
| ATATCTATCAAGGACTGTGC+CGG | 0.574521 | 1.4:-8540738 | MS.gene015986:CDS |
| ACAACTTTCCGAGTACAGAA+AGG | 0.575435 | 1.4:+8540142 | None:intergenic |
| AAAGAGAAAGACTTTAGAGA+AGG | 0.577504 | 1.4:+8540987 | None:intergenic |
| CAACTTTCCGAGTACAGAAA+GGG | 0.577567 | 1.4:+8540143 | None:intergenic |
| ATTCAACTTGTTGAAGCTGA+GGG | 0.582352 | 1.4:+8540118 | None:intergenic |
| TTAAGGGAGTCACAGATGCT+GGG | 0.582917 | 1.4:-8540086 | MS.gene015986:CDS |
| AAATTGCAGGGCATTTGCAA+AGG | 0.585154 | 1.4:+8540889 | None:intergenic |
| CTTGTTAAAGTTAATCTCAG+TGG | 0.588339 | 1.4:-8540030 | MS.gene015986:CDS |
| CGGATTGATTTCATTCACCA+AGG | 0.590158 | 1.4:-8540385 | MS.gene015986:CDS |
| AATGAAGGTCTACAAGCCAT+TGG | 0.590793 | 1.4:-8540786 | MS.gene015986:CDS |
| TTTATTCTCGTCATTTGAGG+AGG | 0.593111 | 1.4:+8541211 | None:intergenic |
| ATTTGGGCAGAACTTTCCAA+TGG | 0.599132 | 1.4:+8540770 | None:intergenic |
| TATTTAGTCCCAAAAGGGTG+TGG | 0.603959 | 1.4:+8539722 | None:intergenic |
| GAGGAAATTAAGGACAAGAT+CGG | 0.606521 | 1.4:+8540587 | None:intergenic |
| AAGCCTTGTCGGAAATTGCA+GGG | 0.607035 | 1.4:+8540877 | None:intergenic |
| TTAGGGAAGCTTGCAATCCG+TGG | 0.607817 | 1.4:-8541068 | MS.gene015986:CDS |
| TGTGCATTTCTCTCAGACAA+CGG | 0.609269 | 1.4:-8540405 | MS.gene015986:CDS |
| GGAAGAAATTTGCTTCCTTG+GGG | 0.618210 | 1.4:+8541492 | None:intergenic |
| TGGGATTGAAGCTGTTGGAA+AGG | 0.620246 | 1.4:-8540463 | MS.gene015986:CDS |
| CTCACAATTGCATCCTGCAG+AGG | 0.621245 | 1.4:-8540498 | MS.gene015986:CDS |
| AACAGCTTCAATCCCAACAT+CGG | 0.622290 | 1.4:+8540470 | None:intergenic |
| ACCCAAATTGGGTAATTCTG+TGG | 0.625237 | 1.4:+8540325 | None:intergenic |
| ATCTTTAGAAGGTTGCCTGT+TGG | 0.625556 | 1.4:-8541326 | MS.gene015986:CDS |
| GGATAGTAGACATCAACTTG+AGG | 0.626268 | 1.4:+8541458 | None:intergenic |
| ACACGTGATCTCTTCTGAGG+TGG | 0.627046 | 1.4:+8541437 | None:intergenic |
| ATGCCCTGCAATTTCCGACA+AGG | 0.628954 | 1.4:-8540880 | MS.gene015986:CDS |
| GGAATCGGAGATCGCACACA+AGG | 0.629259 | 1.4:+8539852 | None:intergenic |
| CGGACACTTCTTTGCAACTG+CGG | 0.631276 | 1.4:+8540851 | None:intergenic |
| GGGTAGCGTTGCCAAATCCA+GGG | 0.632564 | 1.4:+8540163 | None:intergenic |
| CTGACACGTGATCTCTTCTG+AGG | 0.633789 | 1.4:+8541434 | None:intergenic |
| ACAAGACTCTAATGATAACT+CGG | 0.633790 | 1.4:+8540821 | None:intergenic |
| GATGTTGGGATTGAAGCTGT+TGG | 0.634700 | 1.4:-8540468 | MS.gene015986:CDS |
| CTCTCTCACTAACATTTGGG+AGG | 0.636568 | 1.4:+8540568 | None:intergenic |
| AGTGACTGTGAAGAGTTTGG+AGG | 0.636749 | 1.4:-8541182 | MS.gene015986:CDS |
| GATTCCTTGATCCCCAACAC+CGG | 0.655421 | 1.4:+8540719 | None:intergenic |
| TCCATTGCTTGAGAGCTCCG+AGG | 0.656114 | 1.4:-8540058 | MS.gene015986:CDS |
| ACCTTCTAAAGATCTCAAAG+AGG | 0.665153 | 1.4:+8541336 | None:intergenic |
| CGTGGAAGCAACTCAGAACG+CGG | 0.669342 | 1.4:-8541050 | MS.gene015986:CDS |
| GTTGGAACTGCATCACGAGG+AGG | 0.679979 | 1.4:-8541092 | MS.gene015986:CDS |
| CCAACCATGCAGATTGACCA+GGG | 0.686419 | 1.4:+8539975 | None:intergenic |
| GGTTTGTGTATAACCCACCA+TGG | 0.686541 | 1.4:+8541513 | None:intergenic |
| AATAGCAGCAAGTCTAACAT+CGG | 0.688914 | 1.4:+8541118 | None:intergenic |
| AATGAACGAAGTGATTCACA+AGG | 0.695476 | 1.4:+8540201 | None:intergenic |
| GCAGTTGGAACTGCATCACG+AGG | 0.700255 | 1.4:-8541095 | MS.gene015986:CDS |
| TGGGTTATACACAAACCCCA+AGG | 0.726645 | 1.4:-8541507 | MS.gene015986:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGATATAACCTTAAGATT+TGG | + | chr1.4:8540428-8540447 | None:intergenic | 20.0% |
| !! | TAGATATAACCTTAAGATTT+GGG | + | chr1.4:8540427-8540446 | None:intergenic | 20.0% |
| ! | TCTTAAGGTTATATCTATCA+AGG | - | chr1.4:8540430-8540449 | MS.gene015986:CDS | 25.0% |
| !!! | AAAATTGAAGGCTTTTTCTA+TGG | - | chr1.4:8540904-8540923 | MS.gene015986:CDS | 25.0% |
| !!! | TGATATTTTTACAACCTTCA+AGG | + | chr1.4:8541246-8541265 | None:intergenic | 25.0% |
| ACAAGACTCTAATGATAACT+CGG | + | chr1.4:8540360-8540379 | None:intergenic | 30.0% | |
| AGTTGAATTAACTGGACTTA+AGG | - | chr1.4:8541075-8541094 | MS.gene015986:CDS | 30.0% | |
| CTCAAATGACGAGAATAAAA+TGG | - | chr1.4:8539971-8539990 | MS.gene015986:CDS | 30.0% | |
| CTTGTTAAAGTTAATCTCAG+TGG | - | chr1.4:8541148-8541167 | MS.gene015986:CDS | 30.0% | |
| GTTGAATTAACTGGACTTAA+GGG | - | chr1.4:8541076-8541095 | MS.gene015986:CDS | 30.0% | |
| TAACATTTGGGAGGAAATTA+AGG | + | chr1.4:8540604-8540623 | None:intergenic | 30.0% | |
| TTATGGAATGTTTCTTCTGT+TGG | - | chr1.4:8540212-8540231 | MS.gene015986:CDS | 30.0% | |
| ! | AAAGAGAAAGACTTTAGAGA+AGG | + | chr1.4:8540194-8540213 | None:intergenic | 30.0% |
| ! | AGATGTACGCTTTTCAAATT+AGG | + | chr1.4:8540746-8540765 | None:intergenic | 30.0% |
| ! | ATTTTGCACCACAGTTAAAA+AGG | + | chr1.4:8540889-8540908 | None:intergenic | 30.0% |
| ! | CATTTTATTCTCGTCATTTG+AGG | + | chr1.4:8539973-8539992 | None:intergenic | 30.0% |
| ! | CTTCAACAAGTTGAATTAAC+TGG | - | chr1.4:8541067-8541086 | MS.gene015986:CDS | 30.0% |
| !! | ATTACCCAATTTGGGTTTTT+CGG | - | chr1.4:8540860-8540879 | MS.gene015986:CDS | 30.0% |
| !! | CTCTAAAGTCTTTCTCTTTA+TGG | - | chr1.4:8540195-8540214 | MS.gene015986:CDS | 30.0% |
| AAAGTTCTGCCCAAATCTTA+AGG | - | chr1.4:8540415-8540434 | MS.gene015986:CDS | 35.0% | |
| AATAGCAGCAAGTCTAACAT+CGG | + | chr1.4:8540063-8540082 | None:intergenic | 35.0% | |
| AATGAACGAAGTGATTCACA+AGG | + | chr1.4:8540980-8540999 | None:intergenic | 35.0% | |
| AATGATAACTCGGTCAGATT+CGG | + | chr1.4:8540350-8540369 | None:intergenic | 35.0% | |
| ATCACTTGAAAGCCTACAAT+TGG | - | chr1.4:8540823-8540842 | MS.gene015986:CDS | 35.0% | |
| ATCCATTAGCGATCTCAATA+AGG | + | chr1.4:8540247-8540266 | None:intergenic | 35.0% | |
| CATCAAGATCACAAAGCAAT+TGG | + | chr1.4:8541303-8541322 | None:intergenic | 35.0% | |
| CATTCTCCATCGAAAACAAA+TGG | + | chr1.4:8539774-8539793 | None:intergenic | 35.0% | |
| CTGGATATTTAGTCCCAAAA+GGG | + | chr1.4:8541464-8541483 | None:intergenic | 35.0% | |
| GAGGAAATTAAGGACAAGAT+CGG | + | chr1.4:8540594-8540613 | None:intergenic | 35.0% | |
| GATAGTAGACATCAACTTGA+GGG | + | chr1.4:8539722-8539741 | None:intergenic | 35.0% | |
| TAACTGTGGTGCAAAATTGA+AGG | - | chr1.4:8540892-8540911 | MS.gene015986:CDS | 35.0% | |
| TTTATTCTCGTCATTTGAGG+AGG | + | chr1.4:8539970-8539989 | None:intergenic | 35.0% | |
| ! | ACCTTCTAAAGATCTCAAAG+AGG | + | chr1.4:8539845-8539864 | None:intergenic | 35.0% |
| ! | AGATGCTTGTTGAACATCTT+TGG | - | chr1.4:8541515-8541534 | MS.gene015986:CDS | 35.0% |
| ! | AGGAAGAAATTTGCTTCCTT+GGG | + | chr1.4:8539690-8539709 | None:intergenic | 35.0% |
| !! | AATTCAACTTGTTGAAGCTG+AGG | + | chr1.4:8541064-8541083 | None:intergenic | 35.0% |
| !! | AGTGTTCCATTTGTTTTCGA+TGG | - | chr1.4:8539765-8539784 | MS.gene015986:CDS | 35.0% |
| !! | ATTCAACTTGTTGAAGCTGA+GGG | + | chr1.4:8541063-8541082 | None:intergenic | 35.0% |
| !! | CATTTGTTTTCGATGGAGAA+TGG | - | chr1.4:8539772-8539791 | MS.gene015986:CDS | 35.0% |
| !! | TTACCCGCTTTGAGAAAATT+GGG | - | chr1.4:8541433-8541452 | MS.gene015986:CDS | 35.0% |
| AACAGCTTCAATCCCAACAT+CGG | + | chr1.4:8540711-8540730 | None:intergenic | 40.0% | |
| AACTTTAACAAGACCAGCCT+CGG | + | chr1.4:8541140-8541159 | None:intergenic | 40.0% | |
| AAGCCTCTCTCACTAACATT+TGG | + | chr1.4:8540617-8540636 | None:intergenic | 40.0% | |
| AATGAAGGTCTACAAGCCAT+TGG | - | chr1.4:8540392-8540411 | MS.gene015986:CDS | 40.0% | |
| ACAACTTTCCGAGTACAGAA+AGG | + | chr1.4:8541039-8541058 | None:intergenic | 40.0% | |
| ACCCAAATTGGGTAATTCTG+TGG | + | chr1.4:8540856-8540875 | None:intergenic | 40.0% | |
| AGCCTCTCTCACTAACATTT+GGG | + | chr1.4:8540616-8540635 | None:intergenic | 40.0% | |
| AGCTAGAGAGAGATCAGAAA+CGG | + | chr1.4:8540543-8540562 | None:intergenic | 40.0% | |
| AGTGATTCACAAGGAGATAC+AGG | + | chr1.4:8540971-8540990 | None:intergenic | 40.0% | |
| ATATCTATCAAGGACTGTGC+CGG | - | chr1.4:8540440-8540459 | MS.gene015986:CDS | 40.0% | |
| ATTTGGGCAGAACTTTCCAA+TGG | + | chr1.4:8540411-8540430 | None:intergenic | 40.0% | |
| CAACTTTCCGAGTACAGAAA+GGG | + | chr1.4:8541038-8541057 | None:intergenic | 40.0% | |
| CAGGGATGAAACTACTTTGT+CGG | + | chr1.4:8541188-8541207 | None:intergenic | 40.0% | |
| CCAAAGAAGTCGAAGAAAAC+AGG | + | chr1.4:8540490-8540509 | None:intergenic | 40.0% | |
| CTACAGATTCTTTCTCTGTC+AGG | - | chr1.4:8541385-8541404 | MS.gene015986:CDS | 40.0% | |
| CTAGCTGTTATTGGACACTA+TGG | - | chr1.4:8540557-8540576 | MS.gene015986:CDS | 40.0% | |
| CTCGAAATTCTGAACCTTGA+AGG | - | chr1.4:8541229-8541248 | MS.gene015986:CDS | 40.0% | |
| GAAAGTGACTGTGAAGAGTT+TGG | - | chr1.4:8539993-8540012 | MS.gene015986:CDS | 40.0% | |
| GATCTCTCTCTAGCTGTTAT+TGG | - | chr1.4:8540548-8540567 | MS.gene015986:CDS | 40.0% | |
| GCAAATTTCTTCCTGTCTCT+TGG | - | chr1.4:8539696-8539715 | MS.gene015986:CDS | 40.0% | |
| GCCACAGAATTACCCAATTT+GGG | - | chr1.4:8540852-8540871 | MS.gene015986:CDS | 40.0% | |
| GCTGGATATTTAGTCCCAAA+AGG | + | chr1.4:8541465-8541484 | None:intergenic | 40.0% | |
| GGATAGTAGACATCAACTTG+AGG | + | chr1.4:8539723-8539742 | None:intergenic | 40.0% | |
| TATTTAGTCCCAAAAGGGTG+TGG | + | chr1.4:8541459-8541478 | None:intergenic | 40.0% | |
| TGCCACAGAATTACCCAATT+TGG | - | chr1.4:8540851-8540870 | MS.gene015986:CDS | 40.0% | |
| TGGGTTATGGGAAATGCTAA+TGG | - | chr1.4:8540638-8540657 | MS.gene015986:CDS | 40.0% | |
| TGTGCATTTCTCTCAGACAA+CGG | - | chr1.4:8540773-8540792 | MS.gene015986:CDS | 40.0% | |
| TTCAAGTGATATAGCAGCCT+TGG | + | chr1.4:8540813-8540832 | None:intergenic | 40.0% | |
| ! | AAATTGCAGGGCATTTGCAA+AGG | + | chr1.4:8540292-8540311 | None:intergenic | 40.0% |
| ! | ATCTTTAGAAGGTTGCCTGT+TGG | - | chr1.4:8539852-8539871 | MS.gene015986:CDS | 40.0% |
| ! | CAGGAAGAAATTTGCTTCCT+TGG | + | chr1.4:8539691-8539710 | None:intergenic | 40.0% |
| ! | CCTGTTTTCTTCGACTTCTT+TGG | - | chr1.4:8540487-8540506 | MS.gene015986:CDS | 40.0% |
| ! | CGGATTGATTTCATTCACCA+AGG | - | chr1.4:8540793-8540812 | MS.gene015986:CDS | 40.0% |
| ! | GGAAGAAATTTGCTTCCTTG+GGG | + | chr1.4:8539689-8539708 | None:intergenic | 40.0% |
| ! | GTGATAACTTTTGCCATGGT+GGG | - | chr1.4:8539652-8539671 | MS.gene015986:CDS | 40.0% |
| ! | TCAGGTGATAACTTTTGCCA+TGG | - | chr1.4:8539648-8539667 | MS.gene015986:CDS | 40.0% |
| ! | TGCTGATTGAATTGCAATGC+TGG | + | chr1.4:8541483-8541502 | None:intergenic | 40.0% |
| ! | TGCTTGTTGAACATCTTTGG+AGG | - | chr1.4:8541518-8541537 | MS.gene015986:CDS | 40.0% |
| ! | TTTCTATGGTGAGCTGCTTT+GGG | - | chr1.4:8540918-8540937 | MS.gene015986:CDS | 40.0% |
| ! | TTTTCTATGGTGAGCTGCTT+TGG | - | chr1.4:8540917-8540936 | MS.gene015986:CDS | 40.0% |
| !! | CTTACCCGCTTTGAGAAAAT+TGG | - | chr1.4:8541432-8541451 | MS.gene015986:CDS | 40.0% |
| !! | GACTTCTTTGGTTCTGACAA+AGG | - | chr1.4:8540499-8540518 | MS.gene015986:CDS | 40.0% |
| !! | GCCTCTTTGAGATCTTTAGA+AGG | - | chr1.4:8539841-8539860 | MS.gene015986:CDS | 40.0% |
| !! | GTTTCTTCTGTTGGTGATGA+AGG | - | chr1.4:8540221-8540240 | MS.gene015986:CDS | 40.0% |
| !!! | CATTTGAGGAGGTACTTTTG+TGG | + | chr1.4:8539959-8539978 | None:intergenic | 40.0% |
| AAAGGTGAAGCTTCAAGCAC+TGG | - | chr1.4:8540517-8540536 | MS.gene015986:CDS | 45.0% | |
| AACGCTACCCTTTCTGTACT+CGG | - | chr1.4:8541028-8541047 | MS.gene015986:CDS | 45.0% | |
| AGACCTTCATTGCGAATGCT+AGG | + | chr1.4:8540383-8540402 | None:intergenic | 45.0% | |
| AGTGACTGTGAAGAGTTTGG+AGG | - | chr1.4:8539996-8540015 | MS.gene015986:CDS | 45.0% | |
| ATCTGTAACTGCCCTGGATT+TGG | - | chr1.4:8541004-8541023 | MS.gene015986:CDS | 45.0% | |
| ATGTTAGTGAGAGAGGCTTC+TGG | - | chr1.4:8540618-8540637 | MS.gene015986:CDS | 45.0% | |
| CCTTCTTTCCTTCCAAGCTT+CGG | + | chr1.4:8540037-8540056 | None:intergenic | 45.0% | |
| CGACAAAGTAGTTTCATCCC+TGG | - | chr1.4:8541186-8541205 | MS.gene015986:CDS | 45.0% | |
| CTCCCAAATGTTAGTGAGAG+AGG | - | chr1.4:8540611-8540630 | MS.gene015986:CDS | 45.0% | |
| CTCTCTCACTAACATTTGGG+AGG | + | chr1.4:8540613-8540632 | None:intergenic | 45.0% | |
| CTTCTTTCCTTCCAAGCTTC+GGG | + | chr1.4:8540036-8540055 | None:intergenic | 45.0% | |
| GACGCCGAAAAACCCAAATT+GGG | + | chr1.4:8540867-8540886 | None:intergenic | 45.0% | |
| GATGTTGGGATTGAAGCTGT+TGG | - | chr1.4:8540710-8540729 | MS.gene015986:CDS | 45.0% | |
| GGGATTGAAGCTGTTGGAAA+GGG | - | chr1.4:8540716-8540735 | MS.gene015986:CDS | 45.0% | |
| GGTTTGTGTATAACCCACCA+TGG | + | chr1.4:8539668-8539687 | None:intergenic | 45.0% | |
| TGGGATTGAAGCTGTTGGAA+AGG | - | chr1.4:8540715-8540734 | MS.gene015986:CDS | 45.0% | |
| TGGGTTATACACAAACCCCA+AGG | - | chr1.4:8539671-8539690 | MS.gene015986:CDS | 45.0% | |
| TGTCCTAGCATTCGCAATGA+AGG | - | chr1.4:8540377-8540396 | MS.gene015986:CDS | 45.0% | |
| TGTGAAGAGTTTGGAGGTGA+GGG | - | chr1.4:8540002-8540021 | MS.gene015986:CDS | 45.0% | |
| TGTGGCACTCTTCCAATTGT+AGG | + | chr1.4:8540838-8540857 | None:intergenic | 45.0% | |
| TGTTAGTGAGAGAGGCTTCT+GGG | - | chr1.4:8540619-8540638 | MS.gene015986:CDS | 45.0% | |
| TTAAGGGAGTCACAGATGCT+GGG | - | chr1.4:8541092-8541111 | MS.gene015986:CDS | 45.0% | |
| TTATCGATCTGTAACTGCCC+TGG | - | chr1.4:8540998-8541017 | MS.gene015986:CDS | 45.0% | |
| ! | AAAATTGGGCCACACCCTTT+TGG | - | chr1.4:8541447-8541466 | MS.gene015986:CDS | 45.0% |
| ! | AAAGCCTTGTCGGAAATTGC+AGG | + | chr1.4:8540305-8540324 | None:intergenic | 45.0% |
| ! | AAATTGGGCCACACCCTTTT+GGG | - | chr1.4:8541448-8541467 | MS.gene015986:CDS | 45.0% |
| ! | AACTGCGGTTAAAGCCTTGT+CGG | + | chr1.4:8540315-8540334 | None:intergenic | 45.0% |
| ! | AAGCCTTGTCGGAAATTGCA+GGG | + | chr1.4:8540304-8540323 | None:intergenic | 45.0% |
| ! | GGTGATAACTTTTGCCATGG+TGG | - | chr1.4:8539651-8539670 | MS.gene015986:CDS | 45.0% |
| ! | GTGGCCCAATTTTCTCAAAG+CGG | + | chr1.4:8541440-8541459 | None:intergenic | 45.0% |
| ! | TATCTGTTTTGCGTGTGCCA+GGG | + | chr1.4:8541362-8541381 | None:intergenic | 45.0% |
| ! | TGGCCCAATTTTCTCAAAGC+GGG | + | chr1.4:8541439-8541458 | None:intergenic | 45.0% |
| ! | TTATCTGTTTTGCGTGTGCC+AGG | + | chr1.4:8541363-8541382 | None:intergenic | 45.0% |
| !! | AGACTTGCTGCTATTGCAGT+TGG | - | chr1.4:8540068-8540087 | MS.gene015986:CDS | 45.0% |
| !! | ATCTCAAAGAGGCACTCATC+TGG | + | chr1.4:8539834-8539853 | None:intergenic | 45.0% |
| !! | GGCCTTATTGAGATCGCTAA+TGG | - | chr1.4:8540242-8540261 | MS.gene015986:CDS | 45.0% |
| !! | TTCGGCGTCCTTTTTAACTG+TGG | - | chr1.4:8540878-8540897 | MS.gene015986:CDS | 45.0% |
| ACTGCATCACGAGGAGGATT+AGG | - | chr1.4:8540092-8540111 | MS.gene015986:CDS | 50.0% | |
| ATGCCCTGCAATTTCCGACA+AGG | - | chr1.4:8540298-8540317 | MS.gene015986:CDS | 50.0% | |
| CCAACCATGCAGATTGACCA+GGG | + | chr1.4:8541206-8541225 | None:intergenic | 50.0% | |
| CCGAAGCTTGGAAGGAAAGA+AGG | - | chr1.4:8540034-8540053 | MS.gene015986:CDS | 50.0% | |
| CGGACACTTCTTTGCAACTG+CGG | + | chr1.4:8540330-8540349 | None:intergenic | 50.0% | |
| CTCACAATTGCATCCTGCAG+AGG | - | chr1.4:8540680-8540699 | MS.gene015986:CDS | 50.0% | |
| CTGACACGTGATCTCTTCTG+AGG | + | chr1.4:8539747-8539766 | None:intergenic | 50.0% | |
| CTGCATCACGAGGAGGATTA+GGG | - | chr1.4:8540093-8540112 | MS.gene015986:CDS | 50.0% | |
| CTGCTTGTGTTTCCAAACGC+TGG | - | chr1.4:8539892-8539911 | MS.gene015986:CDS | 50.0% | |
| CTGTGAAGAGTTTGGAGGTG+AGG | - | chr1.4:8540001-8540020 | MS.gene015986:CDS | 50.0% | |
| CTTAAGGGAGTCACAGATGC+TGG | - | chr1.4:8541091-8541110 | MS.gene015986:CDS | 50.0% | |
| GAGAGAGGCTTCTGGGTTAT+GGG | - | chr1.4:8540626-8540645 | MS.gene015986:CDS | 50.0% | |
| GATTCCTTGATCCCCAACAC+CGG | + | chr1.4:8540462-8540481 | None:intergenic | 50.0% | |
| GCACTCCTTTCTTCACCAAC+AGG | + | chr1.4:8539870-8539889 | None:intergenic | 50.0% | |
| GCAGAGGAGTAACCGATGTT+GGG | - | chr1.4:8540696-8540715 | MS.gene015986:CDS | 50.0% | |
| GGACGCCGAAAAACCCAAAT+TGG | + | chr1.4:8540868-8540887 | None:intergenic | 50.0% | |
| GGTCTCAAAGCAGTTGCTAG+TGG | - | chr1.4:8540164-8540183 | MS.gene015986:CDS | 50.0% | |
| GTCAGGCTGCACTTTGGTTA+CGG | - | chr1.4:8541402-8541421 | MS.gene015986:CDS | 50.0% | |
| TACCTTTCCCGAAGCTTGGA+AGG | - | chr1.4:8540026-8540045 | MS.gene015986:CDS | 50.0% | |
| TCATCCCTGGTCAATCTGCA+TGG | - | chr1.4:8541199-8541218 | MS.gene015986:CDS | 50.0% | |
| TCCAACCATGCAGATTGACC+AGG | + | chr1.4:8541207-8541226 | None:intergenic | 50.0% | |
| TGAGAGAGGCTTCTGGGTTA+TGG | - | chr1.4:8540625-8540644 | MS.gene015986:CDS | 50.0% | |
| TGCAGAGGAGTAACCGATGT+TGG | - | chr1.4:8540695-8540714 | MS.gene015986:CDS | 50.0% | |
| TGGGATCAAGGATCTGGACT+TGG | - | chr1.4:8540937-8540956 | MS.gene015986:CDS | 50.0% | |
| TTAGGGAAGCTTGCAATCCG+TGG | - | chr1.4:8540110-8540129 | MS.gene015986:CDS | 50.0% | |
| TTCCTTCCAAGCTTCGGGAA+AGG | + | chr1.4:8540031-8540050 | None:intergenic | 50.0% | |
| TTCTCTGTCAGGCTGCACTT+TGG | - | chr1.4:8541396-8541415 | MS.gene015986:CDS | 50.0% | |
| TTGTGTGCGATCTCCGATTC+CGG | - | chr1.4:8541328-8541347 | MS.gene015986:CDS | 50.0% | |
| ! | AACATCGGTTACTCCTCTGC+AGG | + | chr1.4:8540696-8540715 | None:intergenic | 50.0% |
| ! | ACACGTGATCTCTTCTGAGG+TGG | + | chr1.4:8539744-8539763 | None:intergenic | 50.0% |
| ! | CAGAAGCATAAGCCAGCGTT+TGG | + | chr1.4:8539907-8539926 | None:intergenic | 50.0% |
| ! | GGTTGCCTGTTGGTGAAGAA+AGG | - | chr1.4:8539862-8539881 | MS.gene015986:CDS | 50.0% |
| !! | CTGCTTTGGGATCAAGGATC+TGG | - | chr1.4:8540931-8540950 | MS.gene015986:CDS | 50.0% |
| AGGGTAGCGTTGCCAAATCC+AGG | + | chr1.4:8541019-8541038 | None:intergenic | 55.0% | |
| CAACTTGAGGGCCAAGAGAC+AGG | + | chr1.4:8539710-8539729 | None:intergenic | 55.0% | |
| CCCTGGTCAATCTGCATGGT+TGG | - | chr1.4:8541203-8541222 | MS.gene015986:CDS | 55.0% | |
| CGTGGAAGCAACTCAGAACG+CGG | - | chr1.4:8540128-8540147 | MS.gene015986:CDS | 55.0% | |
| GCAGTTGGAACTGCATCACG+AGG | - | chr1.4:8540083-8540102 | MS.gene015986:CDS | 55.0% | |
| GCTGCACTTTGGTTACGGAC+AGG | - | chr1.4:8541407-8541426 | MS.gene015986:CDS | 55.0% | |
| GGAATCGGAGATCGCACACA+AGG | + | chr1.4:8541329-8541348 | None:intergenic | 55.0% | |
| GGGATACCTTTCCCGAAGCT+TGG | - | chr1.4:8540022-8540041 | MS.gene015986:CDS | 55.0% | |
| GGGTAGCGTTGCCAAATCCA+GGG | + | chr1.4:8541018-8541037 | None:intergenic | 55.0% | |
| GTTGGAACTGCATCACGAGG+AGG | - | chr1.4:8540086-8540105 | MS.gene015986:CDS | 55.0% | |
| GTTGGGGATCAAGGAATCGC+TGG | - | chr1.4:8540464-8540483 | MS.gene015986:CDS | 55.0% | |
| TCCATTGCTTGAGAGCTCCG+AGG | - | chr1.4:8541120-8541139 | MS.gene015986:CDS | 55.0% | |
| TGTGTGCGATCTCCGATTCC+GGG | - | chr1.4:8541329-8541348 | MS.gene015986:CDS | 55.0% | |
| ! | ATCAAGGACTGTGCCGGTGT+TGG | - | chr1.4:8540446-8540465 | MS.gene015986:CDS | 55.0% |
| ! | CGCGTTCTGAGTTGCTTCCA+CGG | + | chr1.4:8540130-8540149 | None:intergenic | 55.0% |
| ! | TCAAGGACTGTGCCGGTGTT+GGG | - | chr1.4:8540447-8540466 | MS.gene015986:CDS | 55.0% |
| !! | GGTGAGCTGCTTTGGGATCA+AGG | - | chr1.4:8540925-8540944 | MS.gene015986:CDS | 55.0% |
| CAGGGCTGCTATCCCGGAAT+CGG | + | chr1.4:8541344-8541363 | None:intergenic | 60.0% | |
| GAACGCGGCGTGACAACTCT+AGG | - | chr1.4:8540143-8540162 | MS.gene015986:CDS | 60.0% | |
| GCCTCGGAGCTCTCAAGCAA+TGG | + | chr1.4:8541124-8541143 | None:intergenic | 60.0% | |
| TTGCTTGAGAGCTCCGAGGC+TGG | - | chr1.4:8541124-8541143 | MS.gene015986:CDS | 60.0% | |
| ! | CAAGGACTGTGCCGGTGTTG+GGG | - | chr1.4:8540448-8540467 | MS.gene015986:CDS | 60.0% |
| ! | TGTGCCGGTGTTGGGGATCA+AGG | - | chr1.4:8540455-8540474 | MS.gene015986:CDS | 60.0% |
| CGATTCCGGGATAGCAGCCC+TGG | - | chr1.4:8541342-8541361 | MS.gene015986:CDS | 65.0% | |
| GTGTGCCAGGGCTGCTATCC+CGG | + | chr1.4:8541350-8541369 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 8539642 | 8541558 | 8539642 | ID=MS.gene015986 |
| chr1.4 | mRNA | 8539642 | 8541558 | 8539642 | ID=MS.gene015986.t1;Parent=MS.gene015986 |
| chr1.4 | exon | 8539642 | 8541558 | 8539642 | ID=MS.gene015986.t1.exon1;Parent=MS.gene015986.t1 |
| chr1.4 | CDS | 8539642 | 8541558 | 8539642 | ID=cds.MS.gene015986.t1;Parent=MS.gene015986.t1 |
| Gene Sequence |
| Protein sequence |
