AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene016085

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016085.t1 MTR_1g014510 96.765 340 10 1 1 339 1 340 0.0 650
MS.gene016085.t1 MTR_0103s0090 50.445 337 162 3 1 336 1 333 2.22e-118 346
MS.gene016085.t1 MTR_6g007760 49.196 311 156 2 1 311 1 309 3.15e-100 298
MS.gene016085.t1 MTR_6g007743 44.478 335 177 3 4 336 5 332 1.50e-99 298
MS.gene016085.t1 MTR_6g007747 44.848 330 175 3 7 336 8 330 5.50e-90 274
MS.gene016085.t1 MTR_6g007740 43.675 332 178 3 7 336 8 332 6.67e-90 277
MS.gene016085.t1 MTR_6g007750 41.791 335 183 5 7 336 8 335 6.11e-87 266
MS.gene016085.t1 MTR_6g007757 43.544 333 178 4 7 336 8 333 2.56e-86 265
MS.gene016085.t1 MTR_3g090550 41.566 332 187 5 8 338 3 328 2.74e-84 258
MS.gene016085.t1 MTR_0103s0090 49.796 245 119 2 93 336 1 242 5.43e-83 253
MS.gene016085.t1 MTR_4g106720 42.090 335 185 6 9 339 9 338 4.42e-82 253
MS.gene016085.t1 MTR_5g034910 42.138 318 180 3 16 332 12 326 2.40e-77 241
MS.gene016085.t1 MTR_5g034980 40.000 320 188 3 14 332 10 326 4.08e-76 238
MS.gene016085.t1 MTR_6g007753 41.549 284 160 2 55 336 337 616 3.06e-75 244
MS.gene016085.t1 MTR_6g007753 32.727 330 177 4 7 336 8 292 4.46e-56 193
MS.gene016085.t1 MTR_1g014790 73.939 165 34 3 88 245 39 201 4.24e-71 220
MS.gene016085.t1 MTR_5g034990 39.940 333 184 4 9 336 12 333 6.43e-71 224
MS.gene016085.t1 MTR_5g034930 38.602 329 189 6 16 337 11 333 3.57e-69 220
MS.gene016085.t1 MTR_5g034970 39.144 327 179 5 15 337 11 321 3.06e-63 204
MS.gene016085.t1 MTR_6g007757 40.299 268 148 5 7 271 8 266 3.65e-63 202
MS.gene016085.t1 MTR_8g041390 31.157 337 225 6 1 332 3 337 2.55e-57 191
MS.gene016085.t1 MTR_3g072560 31.231 333 221 5 9 339 16 342 4.90e-53 179
MS.gene016085.t1 MTR_0096s0100 31.532 333 216 7 6 333 13 338 7.21e-53 178
MS.gene016085.t1 MTR_1g023180 32.938 337 204 6 15 332 25 358 1.27e-52 179
MS.gene016085.t1 MTR_2g007990 33.435 329 212 6 12 336 16 341 3.70e-52 177
MS.gene016085.t1 MTR_1g068630 34.049 326 206 6 12 334 16 335 1.17e-51 175
MS.gene016085.t1 MTR_3g012420 30.029 343 228 6 4 336 7 347 2.44e-51 175
MS.gene016085.t1 MTR_3g072530 31.515 330 214 6 12 335 15 338 1.82e-50 172
MS.gene016085.t1 MTR_6g081840 31.962 316 209 3 25 336 24 337 5.80e-49 168
MS.gene016085.t1 MTR_2g016710 31.077 325 218 3 12 335 9 328 1.09e-48 167
MS.gene016085.t1 MTR_1g030580 31.928 332 214 5 8 334 13 337 1.41e-48 167
MS.gene016085.t1 MTR_3g112480 31.065 338 208 5 14 333 23 353 1.81e-48 167
MS.gene016085.t1 MTR_7g111830 30.267 337 226 5 9 338 5 339 2.04e-48 167
MS.gene016085.t1 MTR_1g030600 29.909 331 225 6 7 333 14 341 5.67e-48 166
MS.gene016085.t1 MTR_6g036450 32.036 334 216 6 12 338 17 346 1.51e-47 164
MS.gene016085.t1 MTR_1g074120 32.738 336 209 10 7 335 12 337 1.05e-46 162
MS.gene016085.t1 MTR_5g034980 37.295 244 149 3 14 256 10 250 1.89e-46 160
MS.gene016085.t1 MTR_1g070175 30.330 333 221 6 7 338 12 334 2.39e-46 161
MS.gene016085.t1 MTR_3g072500 29.794 339 224 6 8 339 17 348 1.28e-45 160
MS.gene016085.t1 MTR_3g095460 29.377 337 230 5 8 338 2 336 1.64e-45 158
MS.gene016085.t1 MTR_7g100050 30.060 336 220 7 3 331 5 332 1.65e-44 157
MS.gene016085.t1 MTR_1g073990 33.828 337 209 8 5 335 10 338 1.68e-44 156
MS.gene016085.t1 MTR_2g007260 31.498 327 211 5 17 336 24 344 1.95e-44 157
MS.gene016085.t1 MTR_5g021160 31.595 326 218 5 15 337 11 334 2.35e-44 156
MS.gene016085.t1 MTR_2g102340 31.761 318 211 6 16 331 17 330 1.26e-43 154
MS.gene016085.t1 MTR_1g074160 31.776 321 205 9 22 335 21 334 1.51e-43 153
MS.gene016085.t1 MTR_1g074020 33.117 308 197 6 31 335 33 334 3.15e-43 152
MS.gene016085.t1 MTR_1g030400 30.519 308 206 6 37 338 33 338 4.03e-43 153
MS.gene016085.t1 MTR_1g038560 30.247 324 221 2 12 334 4 323 4.58e-43 152
MS.gene016085.t1 MTR_4g094340 30.091 329 212 6 12 331 10 329 1.88e-42 150
MS.gene016085.t1 MTR_1g074070 30.422 332 222 6 7 335 12 337 2.10e-42 150
MS.gene016085.t1 MTR_1g114210 28.080 349 235 7 1 338 1 344 2.34e-42 150
MS.gene016085.t1 MTR_4g094340 30.091 329 212 6 12 331 28 347 3.35e-42 150
MS.gene016085.t1 MTR_4g094360 29.940 334 225 5 8 336 11 340 4.68e-42 150
MS.gene016085.t1 MTR_2g007960 30.303 330 216 6 12 331 13 338 4.69e-42 150
MS.gene016085.t1 MTR_2g007970 30.473 338 223 6 4 335 5 336 6.35e-42 150
MS.gene016085.t1 MTR_1g051120 32.344 337 211 9 7 335 12 339 8.18e-42 149
MS.gene016085.t1 MTR_4g094362 30.120 332 224 5 12 339 15 342 2.22e-41 148
MS.gene016085.t1 MTR_8g006010 28.660 321 227 2 11 331 10 328 2.34e-41 148
MS.gene016085.t1 MTR_3g112480 30.851 282 172 3 70 333 22 298 6.75e-41 146
MS.gene016085.t1 MTR_2g027030 29.641 334 223 5 4 331 5 332 3.33e-40 145
MS.gene016085.t1 MTR_3g095420 26.769 325 232 4 12 331 8 331 1.01e-39 144
MS.gene016085.t1 MTR_3g072500 33.065 248 157 3 97 339 2 245 3.51e-39 140
MS.gene016085.t1 MTR_8g092650 29.305 331 218 5 12 332 6 330 3.91e-39 142
MS.gene016085.t1 MTR_3g095450 28.308 325 227 4 12 331 6 329 7.95e-39 141
MS.gene016085.t1 MTR_4g129650 30.636 346 221 7 1 339 1 334 9.95e-39 141
MS.gene016085.t1 MTR_4g094340 33.333 249 160 3 87 331 17 263 1.27e-38 139
MS.gene016085.t1 MTR_2g016710 29.801 302 206 3 12 312 9 305 3.63e-38 139
MS.gene016085.t1 MTR_4g094352 29.573 328 221 4 12 331 13 338 9.85e-38 139
MS.gene016085.t1 MTR_5g025290 28.955 335 216 7 15 332 15 344 2.33e-37 138
MS.gene016085.t1 MTR_4g094342 28.963 328 210 7 12 326 14 331 2.64e-37 137
MS.gene016085.t1 MTR_5g025290 28.955 335 216 7 15 332 43 372 2.73e-37 138
MS.gene016085.t1 MTR_8g006120 29.814 322 223 3 11 331 10 329 3.52e-37 137
MS.gene016085.t1 MTR_5g021160 34.156 243 158 2 97 337 9 251 5.52e-37 134
MS.gene016085.t1 MTR_3g072520 27.795 331 226 6 8 331 6 330 8.69e-37 136
MS.gene016085.t1 MTR_5g025340 31.231 333 211 7 15 332 14 343 1.21e-36 136
MS.gene016085.t1 MTR_2g065550 27.864 323 228 4 11 331 10 329 1.25e-36 135
MS.gene016085.t1 MTR_5g025370 30.357 336 214 7 15 333 14 346 2.17e-36 135
MS.gene016085.t1 MTR_8g072350 29.377 337 216 7 14 333 12 343 2.50e-36 135
MS.gene016085.t1 MTR_5g068790 28.012 332 232 4 4 331 11 339 2.04e-35 132
MS.gene016085.t1 MTR_5g025400 30.000 350 222 8 1 333 4 347 2.26e-35 132
MS.gene016085.t1 MTR_5g069040 28.443 334 230 5 4 331 11 341 3.72e-35 132
MS.gene016085.t1 MTR_4g094360 29.603 277 188 3 64 336 20 293 5.77e-34 128
MS.gene016085.t1 MTR_3g095440 28.308 325 227 4 12 331 6 329 1.06e-32 125
MS.gene016085.t1 MTR_5g025330 29.940 334 216 7 15 333 13 343 1.28e-32 127
MS.gene016085.t1 MTR_5g089390 27.187 320 220 5 15 331 18 327 1.28e-32 124
MS.gene016085.t1 MTR_4g094360 28.339 307 211 5 8 309 11 313 2.14e-32 123
MS.gene016085.t1 MTR_8g006090 28.313 332 235 3 1 331 1 330 2.19e-32 124
MS.gene016085.t1 MTR_3g019050 28.483 323 218 7 15 331 22 337 3.21e-31 121
MS.gene016085.t1 MTR_4g129650 34.222 225 140 3 109 331 1 219 3.45e-31 118
MS.gene016085.t1 MTR_8g092650 29.437 231 150 2 111 332 26 252 1.70e-30 117
MS.gene016085.t1 MTR_8g006050 29.630 297 187 6 40 331 23 302 7.92e-30 117
MS.gene016085.t1 MTR_3g112480 29.437 231 141 2 120 333 1 226 9.35e-29 112
MS.gene016085.t1 MTR_4g100840 27.479 353 232 10 1 338 4 347 7.88e-28 111
MS.gene016085.t1 MTR_5g021160 31.174 247 166 4 15 259 11 255 8.33e-28 110
MS.gene016085.t1 MTR_1g052205 30.380 237 137 8 116 338 2 224 4.26e-27 107
MS.gene016085.t1 MTR_1g074160 32.099 243 151 9 22 257 21 256 2.81e-26 105
MS.gene016085.t1 MTR_3g072530 27.645 293 178 10 12 282 15 295 4.02e-26 106
MS.gene016085.t1 MTR_5g012650 27.273 297 203 5 50 338 46 337 1.58e-25 105
MS.gene016085.t1 MTR_8g006090 29.461 241 169 1 91 331 11 250 1.84e-25 103
MS.gene016085.t1 MTR_3g072500 27.799 259 173 6 8 259 17 268 1.59e-24 101
MS.gene016085.t1 MTR_8g006090 26.774 310 224 3 1 309 1 308 1.64e-23 99.0
MS.gene016085.t1 MTR_3g095440 26.693 251 178 4 12 257 6 255 4.50e-22 94.0
MS.gene016085.t1 MTR_2g102340 29.268 246 168 6 16 259 43 284 5.21e-22 95.1
MS.gene016085.t1 MTR_4g094340 26.848 257 170 6 12 259 10 257 1.78e-20 89.7
MS.gene016085.t1 MTR_4g094340 26.923 260 172 6 12 262 28 278 3.51e-20 89.4
MS.gene016085.t1 MTR_1g051120 33.333 192 117 6 7 194 12 196 6.17e-19 84.3
MS.gene016085.t1 MTR_1g051120 33.333 192 117 6 7 194 12 196 9.57e-19 85.1
MS.gene016085.t1 MTR_3g072500 29.534 193 122 6 8 193 17 202 2.55e-18 82.8
MS.gene016085.t1 MTR_8g006090 29.020 255 177 4 11 263 11 263 5.81e-17 80.5
MS.gene016085.t1 MTR_4g094342 27.404 208 142 5 12 213 14 218 1.56e-15 75.9
MS.gene016085.t1 MTR_4g094340 27.941 204 129 6 12 206 28 222 4.84e-13 68.2
MS.gene016085.t1 MTR_3g093450 23.364 214 111 6 133 334 10 182 7.99e-11 61.2
MS.gene016085.t1 MTR_8g006090 30.460 174 119 2 91 263 11 183 9.50e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016085.t1 AT5G40240 54.464 336 148 3 1 333 9 342 7.63e-127 368
MS.gene016085.t1 AT5G40240 54.464 336 148 3 1 333 9 342 7.63e-127 368
MS.gene016085.t1 AT5G40240 54.464 336 148 3 1 333 23 356 2.22e-126 367
MS.gene016085.t1 AT5G40230 52.888 329 150 4 8 333 17 343 8.49e-120 350
MS.gene016085.t1 AT4G15540 53.614 332 142 2 4 335 9 328 3.09e-111 327
MS.gene016085.t1 AT4G15540 53.614 332 142 2 4 335 9 328 3.09e-111 327
MS.gene016085.t1 AT3G28050 48.378 339 166 5 1 336 1 333 3.42e-108 320
MS.gene016085.t1 AT5G40210 45.509 334 162 4 3 335 4 318 1.17e-96 290
MS.gene016085.t1 AT3G28100 44.745 333 174 5 8 335 10 337 3.81e-82 253
MS.gene016085.t1 AT3G28130 45.260 327 173 5 8 331 9 332 7.04e-79 245
MS.gene016085.t1 AT3G28070 42.943 333 180 5 8 335 13 340 4.47e-76 238
MS.gene016085.t1 AT3G28080 42.342 333 182 5 8 335 10 337 5.22e-75 235
MS.gene016085.t1 AT3G28080 40.541 333 180 6 8 335 10 329 9.20e-68 216
MS.gene016085.t1 AT3G28070 42.915 247 132 4 94 335 6 248 3.33e-65 207
MS.gene016085.t1 AT3G28070 42.671 307 166 5 8 309 13 314 1.14e-63 205
MS.gene016085.t1 AT3G28130 46.058 241 125 4 94 331 8 246 8.70e-63 201
MS.gene016085.t1 AT3G28130 46.058 241 125 4 94 331 8 246 8.70e-63 201
MS.gene016085.t1 AT3G28080 41.393 244 134 4 97 335 9 248 1.17e-58 190
MS.gene016085.t1 AT3G28080 41.393 244 134 4 97 335 9 248 1.17e-58 190
MS.gene016085.t1 AT3G28080 41.393 244 134 4 97 335 9 248 1.17e-58 190
MS.gene016085.t1 AT3G28080 41.393 244 134 4 97 335 9 248 1.17e-58 190
MS.gene016085.t1 AT1G70260 31.953 338 218 6 8 336 8 342 2.66e-55 185
MS.gene016085.t1 AT3G28100 44.922 256 132 4 8 258 10 261 1.48e-54 179
MS.gene016085.t1 AT2G39510 32.523 329 217 5 12 338 8 333 1.90e-54 182
MS.gene016085.t1 AT4G08290 32.229 332 217 5 12 339 13 340 3.10e-54 182
MS.gene016085.t1 AT3G28080 36.747 332 148 5 8 335 10 283 8.84e-54 179
MS.gene016085.t1 AT5G07050 32.424 330 213 5 12 333 18 345 8.40e-53 179
MS.gene016085.t1 AT5G13670 34.743 331 207 7 7 332 3 329 4.41e-52 176
MS.gene016085.t1 AT3G18200 33.735 332 206 6 15 338 38 363 8.82e-52 176
MS.gene016085.t1 AT3G30340 31.611 329 219 4 9 333 5 331 2.63e-51 174
MS.gene016085.t1 AT1G21890 31.143 350 221 6 3 338 2 345 4.82e-51 174
MS.gene016085.t1 AT2G37460 32.738 336 207 6 4 331 7 331 6.09e-51 174
MS.gene016085.t1 AT1G09380 29.944 354 222 5 9 338 5 356 1.59e-50 172
MS.gene016085.t1 AT1G75500 30.816 331 220 4 15 338 23 351 9.01e-50 171
MS.gene016085.t1 AT1G75500 30.816 331 220 4 15 338 23 351 9.01e-50 171
MS.gene016085.t1 AT3G28130 43.874 253 137 4 8 257 9 259 9.62e-50 167
MS.gene016085.t1 AT2G40900 29.499 339 222 5 3 336 2 328 5.64e-49 169
MS.gene016085.t1 AT1G44800 30.606 330 221 5 8 334 7 331 2.61e-48 166
MS.gene016085.t1 AT3G28070 39.535 215 121 4 126 335 1 211 3.16e-48 162
MS.gene016085.t1 AT3G28130 42.584 209 115 4 126 331 1 207 1.04e-46 158
MS.gene016085.t1 AT1G60050 32.653 343 218 7 7 338 8 348 1.28e-46 162
MS.gene016085.t1 AT4G08300 29.538 325 222 4 12 332 11 332 6.53e-46 160
MS.gene016085.t1 AT3G28100 47.087 206 101 3 8 209 10 211 2.06e-45 155
MS.gene016085.t1 AT5G64700 33.968 315 197 8 31 336 27 339 4.04e-45 158
MS.gene016085.t1 AT3G28130 46.569 204 105 3 8 209 9 210 2.72e-43 149
MS.gene016085.t1 AT3G28080 38.140 215 124 4 126 335 1 211 3.85e-43 149
MS.gene016085.t1 AT1G01070 30.564 337 228 4 1 334 5 338 5.76e-43 152
MS.gene016085.t1 AT1G68170 30.448 335 222 7 4 331 3 333 1.89e-42 151
MS.gene016085.t1 AT1G11450 31.595 326 217 6 12 335 16 337 1.92e-42 150
MS.gene016085.t1 AT1G68170 31.003 329 215 7 8 331 2 323 1.07e-41 149
MS.gene016085.t1 AT3G53210 30.000 320 221 3 15 333 13 330 6.63e-41 147
MS.gene016085.t1 AT1G21890 30.000 320 205 5 3 309 2 315 1.09e-40 146
MS.gene016085.t1 AT3G56620 28.395 324 214 5 12 329 11 322 2.82e-40 145
MS.gene016085.t1 AT4G28040 31.361 338 203 9 7 335 6 323 5.47e-40 144
MS.gene016085.t1 AT4G28040 31.361 338 203 9 7 335 6 323 5.47e-40 144
MS.gene016085.t1 AT4G28040 31.361 338 203 9 7 335 6 323 5.47e-40 144
MS.gene016085.t1 AT4G28040 31.361 338 203 9 7 335 6 323 5.47e-40 144
MS.gene016085.t1 AT4G28040 31.361 338 203 9 7 335 6 323 5.47e-40 144
MS.gene016085.t1 AT1G43650 32.099 324 213 5 15 337 10 327 5.90e-40 144
MS.gene016085.t1 AT1G11450 32.423 293 192 6 45 335 5 293 3.02e-39 141
MS.gene016085.t1 AT1G11460 29.503 322 222 5 12 331 16 334 1.26e-38 140
MS.gene016085.t1 AT4G01430 29.154 319 208 7 26 334 23 333 2.56e-38 140
MS.gene016085.t1 AT3G18200 34.599 237 144 3 109 338 1 233 3.04e-38 137
MS.gene016085.t1 AT1G11450 32.509 283 186 5 55 335 7 286 3.59e-38 138
MS.gene016085.t1 AT1G01070 32.197 264 177 2 70 331 25 288 5.63e-38 138
MS.gene016085.t1 AT4G01440 27.596 337 235 6 5 336 3 335 5.94e-38 139
MS.gene016085.t1 AT2G37450 30.636 346 195 7 6 337 3 317 7.28e-38 138
MS.gene016085.t1 AT3G28080 33.745 243 100 4 97 335 9 194 9.08e-38 134
MS.gene016085.t1 AT5G45370 29.755 326 211 8 11 333 19 329 5.30e-37 136
MS.gene016085.t1 AT1G25270 28.261 322 227 4 15 334 6 325 5.59e-37 136
MS.gene016085.t1 AT5G45370 28.655 342 218 9 11 333 19 353 1.02e-36 136
MS.gene016085.t1 AT5G45370 28.655 342 218 9 11 333 19 353 1.02e-36 136
MS.gene016085.t1 AT4G30420 28.485 330 225 5 8 331 5 329 1.13e-34 130
MS.gene016085.t1 AT1G11450 33.740 246 160 3 91 335 2 245 1.27e-34 127
MS.gene016085.t1 AT4G08290 33.333 243 154 5 12 250 13 251 2.32e-34 127
MS.gene016085.t1 AT4G30420 28.793 323 219 5 15 331 2 319 4.72e-34 129
MS.gene016085.t1 AT3G53210 29.502 261 184 0 73 333 13 273 3.27e-33 125
MS.gene016085.t1 AT4G01440 26.774 310 221 5 5 312 3 308 4.94e-33 125
MS.gene016085.t1 AT1G11450 30.000 300 204 6 12 309 16 311 8.73e-33 124
MS.gene016085.t1 AT3G30340 29.020 255 175 4 9 259 5 257 5.51e-31 118
MS.gene016085.t1 AT4G19185 29.513 349 225 9 2 333 10 354 5.57e-31 121
MS.gene016085.t1 AT4G01430 28.912 294 191 7 26 309 23 308 6.21e-31 119
MS.gene016085.t1 AT3G45870 28.923 325 213 6 15 326 15 334 3.93e-30 118
MS.gene016085.t1 AT2G37450 31.496 254 151 4 98 337 1 245 7.91e-30 115
MS.gene016085.t1 AT3G53210 31.624 234 157 3 15 247 13 244 3.44e-28 110
MS.gene016085.t1 AT4G01450 29.221 308 208 5 26 331 24 323 8.65e-28 111
MS.gene016085.t1 AT4G19185 29.811 265 167 6 84 333 16 276 9.23e-27 108
MS.gene016085.t1 AT4G01440 26.754 228 163 2 112 336 1 227 4.72e-26 104
MS.gene016085.t1 AT4G01440 26.754 228 163 2 112 336 1 227 4.72e-26 104
MS.gene016085.t1 AT4G01450 27.972 286 196 5 26 309 24 301 5.62e-26 106
MS.gene016085.t1 AT3G45870 28.571 308 202 6 15 309 15 317 9.26e-26 105
MS.gene016085.t1 AT5G45370 27.953 254 164 6 97 334 2 252 1.84e-25 103
MS.gene016085.t1 AT5G45370 27.953 254 164 6 97 334 2 252 1.84e-25 103
MS.gene016085.t1 AT4G24980 27.184 309 157 9 26 334 1 241 5.57e-25 102
MS.gene016085.t1 AT4G01440 27.451 255 179 5 5 257 3 253 1.14e-24 101
MS.gene016085.t1 AT5G47470 24.611 321 229 6 15 331 33 344 2.69e-23 99.4
MS.gene016085.t1 AT5G47470 24.611 321 229 6 15 331 61 372 2.87e-23 99.8
MS.gene016085.t1 AT5G47470 24.611 321 229 6 15 331 61 372 3.11e-23 99.4
MS.gene016085.t1 AT4G01450 28.632 234 157 5 26 257 24 249 4.00e-23 97.1
MS.gene016085.t1 AT5G64700 31.197 234 152 7 31 257 27 258 7.87e-23 96.3
MS.gene016085.t1 AT4G16620 25.828 302 198 7 51 339 50 338 3.05e-21 93.6
MS.gene016085.t1 AT1G43650 31.687 243 159 5 15 256 10 246 3.16e-20 89.4
MS.gene016085.t1 AT4G01450 31.414 191 121 5 26 214 24 206 6.59e-20 87.8
MS.gene016085.t1 AT4G16620 25.896 251 167 4 98 339 1 241 8.81e-19 85.1
MS.gene016085.t1 AT4G16620 25.896 251 167 4 98 339 1 241 8.81e-19 85.1
MS.gene016085.t1 AT3G45870 31.481 216 131 5 15 217 15 226 1.73e-18 84.7
MS.gene016085.t1 AT4G01430 24.876 201 139 3 141 334 1 196 2.02e-18 83.2
MS.gene016085.t1 AT2G37450 27.753 227 141 4 125 337 61 278 2.04e-18 84.7
MS.gene016085.t1 AT3G28060 32.520 123 81 2 188 309 33 154 4.38e-18 80.5
MS.gene016085.t1 AT3G28070 49.153 118 59 1 8 125 13 129 7.19e-17 79.0
MS.gene016085.t1 AT5G45370 25.333 225 145 6 127 333 74 293 5.46e-16 78.2
MS.gene016085.t1 AT3G45870 24.194 248 170 4 91 326 18 259 6.77e-15 74.7
MS.gene016085.t1 AT4G16620 28.177 181 120 5 51 227 50 224 1.12e-11 64.7
MS.gene016085.t1 AT3G45870 23.377 231 159 4 91 309 18 242 8.60e-11 62.0
MS.gene016085.t1 AT3G45870 23.377 231 159 4 91 309 18 242 8.60e-11 62.0

Find 78 sgRNAs with CRISPR-Local

Find 179 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGTGATGCACTGCATTT+TGG 0.191757 1.2:+8003544 MS.gene016085:CDS
CCTAATAGTTGTTCTTTATA+AGG 0.207517 1.2:+8002699 MS.gene016085:CDS
TCCAATATGGTACATTATTC+AGG 0.222282 1.2:+8002846 MS.gene016085:CDS
ACAGAATCAAATTGGATTCT+TGG 0.236085 1.2:+8002790 MS.gene016085:CDS
GTCATCATTCGATTCTTCTT+TGG 0.263684 1.2:-8003955 None:intergenic
CCTTATAAAGAACAACTATT+AGG 0.270894 1.2:-8002699 None:intergenic
GGTTCTACGGTATCAATATT+AGG 0.271179 1.2:+8002673 MS.gene016085:CDS
CCTCAACAACAGAATCAAAT+TGG 0.275934 1.2:+8002782 MS.gene016085:CDS
AGTTTCTTATTGTTCCAATA+TGG 0.297844 1.2:+8002833 MS.gene016085:CDS
ATGGAGATCATTGTTATATC+AGG 0.299829 1.2:-8003100 None:intergenic
GATGGTGAGGGTATGATTAT+TGG 0.303670 1.2:-8002724 None:intergenic
TCGAATGATGACTTTGAAAT+AGG 0.311024 1.2:+8003966 MS.gene016085:CDS
ACTTGGGGACTACATATTAA+AGG 0.320640 1.2:+8003454 MS.gene016085:CDS
CTAATAGTTGTTCTTTATAA+GGG 0.322927 1.2:+8002700 MS.gene016085:CDS
ATCTTCCAAGCATTCAAGTT+TGG 0.339337 1.2:-8003073 None:intergenic
TTAAAGAGTGATATATAAAC+AGG 0.340392 1.2:-8003478 None:intergenic
CTCTCCCCTTCTTTATCAAA+TGG 0.343306 1.2:+8001266 MS.gene016085:CDS
GCTCAGCTCTTTGGATATAA+AGG 0.343826 1.2:+8001564 MS.gene016085:CDS
GTGATTGGAGAATGAATAAT+AGG 0.368778 1.2:-8002760 None:intergenic
GAGAGATAGGCACCTGAAAA+TGG 0.369339 1.2:-8001661 None:intergenic
TTCTACAGGACTAAGTTGTT+TGG 0.372838 1.2:+8003426 MS.gene016085:CDS
ACCTGAATAATGTACCATAT+TGG 0.374880 1.2:-8002847 None:intergenic
ATAGGTGGTGGTTGTGTTGA+TGG 0.377265 1.2:-8002742 None:intergenic
AGGATGGAGAAGGTAAAATT+AGG 0.378528 1.2:+8002622 MS.gene016085:intron
AGAGTTGTAGCTCAGCTCTT+TGG 0.379055 1.2:+8001555 MS.gene016085:intron
CTTATAAAGAACAACTATTA+GGG 0.392099 1.2:-8002698 None:intergenic
TTCAAAGCAGCTACTCAAAA+GGG 0.408454 1.2:+8001181 MS.gene016085:CDS
GATTCTGTTGTTGAGGTGAT+TGG 0.432000 1.2:-8002775 None:intergenic
ATTCAAAGCAGCTACTCAAA+AGG 0.435610 1.2:+8001180 MS.gene016085:CDS
AGTGGAGACAACAAATGAAT+AGG 0.435890 1.2:-8001227 None:intergenic
TGTAAAAGCAGGTATAAGAT+TGG 0.445087 1.2:-8001625 None:intergenic
AGATCACCATTTGATAAAGA+AGG 0.450262 1.2:-8001272 None:intergenic
AAGCAGTCAAGCAAAGATCT+TGG 0.450311 1.2:+8002651 MS.gene016085:CDS
TAGAACCAAACTTGAATGCT+TGG 0.454876 1.2:+8003068 MS.gene016085:CDS
GGAGCAGTAATAATATCAAT+AGG 0.455416 1.2:+8003906 MS.gene016085:CDS
ATTGCAACCATTGCTGTGAA+TGG 0.457297 1.2:-8001127 None:intergenic
AATACCTCAATAATCTCTGC+TGG 0.464335 1.2:-8002995 None:intergenic
TTTCTTTACCGAGCATATGA+TGG 0.466932 1.2:-8003119 None:intergenic
GGTTCTAGTAGTAAGCATAT+TGG 0.475641 1.2:-8003052 None:intergenic
TAAAGAAGGGGAGAGGCAAA+AGG 0.494021 1.2:-8001258 None:intergenic
TGGTGGTTGTGTTGATGGTG+AGG 0.494359 1.2:-8002737 None:intergenic
AAGTTGTTTGGTTCACACTT+GGG 0.495577 1.2:+8003438 MS.gene016085:CDS
AGCAAAGATCTTGGGTTCTA+CGG 0.496585 1.2:+8002660 MS.gene016085:CDS
AGCAGTCAAGCAAAGATCTT+GGG 0.501625 1.2:+8002652 MS.gene016085:CDS
GATCACCATTTGATAAAGAA+GGG 0.505013 1.2:-8001271 None:intergenic
GAGGGAGTGAGAGAGATGGC+TGG 0.508679 1.2:+8001079 None:intergenic
GAATCAAATTGGATTCTTGG+TGG 0.509232 1.2:+8002793 MS.gene016085:CDS
TAAGTTGTTTGGTTCACACT+TGG 0.515322 1.2:+8003437 MS.gene016085:CDS
CCAATTTGATTCTGTTGTTG+AGG 0.516438 1.2:-8002782 None:intergenic
AGGGAGTGAGAGAGATGGCT+GGG 0.523477 1.2:+8001080 None:intergenic
GGTGGTTGTGTTGATGGTGA+GGG 0.534351 1.2:-8002736 None:intergenic
GGCTGGGAGGCATTGTTACA+AGG 0.538462 1.2:+8001096 MS.gene016085:CDS
TTGCAACCATTGCTGTGAAT+GGG 0.538780 1.2:-8001126 None:intergenic
AGTTGTTTGGTTCACACTTG+GGG 0.541777 1.2:+8003439 MS.gene016085:CDS
TGGAGAAGGTAAAATTAGGA+TGG 0.545808 1.2:+8002626 MS.gene016085:CDS
GAAAGAGATGAAGCAAGAGT+AGG 0.546261 1.2:-8001603 None:intergenic
CATATTTATGAAGGTCAAGA+GGG 0.562057 1.2:+8001378 MS.gene016085:intron
GCTAGGATGAATGTAAAAGC+AGG 0.575660 1.2:-8001636 None:intergenic
GGCACCTGAAAATGGTAGCT+AGG 0.575768 1.2:-8001653 None:intergenic
AATGATCTCCATCATATGCT+CGG 0.578698 1.2:+8003111 MS.gene016085:CDS
AGGCAAAAGGAGAACAAGAG+TGG 0.584664 1.2:-8001245 None:intergenic
AAGATTAGAGACATGTTCAA+AGG 0.591308 1.2:-8001407 None:intergenic
GCATATTTATGAAGGTCAAG+AGG 0.603216 1.2:+8001377 MS.gene016085:intron
ATTAGAGACATGTTCAAAGG+AGG 0.612665 1.2:-8001404 None:intergenic
TGTGCTCCCATTCACAGCAA+TGG 0.613703 1.2:+8001120 MS.gene016085:CDS
GCAATAGAGTGCACAAACGT+TGG 0.615362 1.2:+8001145 MS.gene016085:CDS
AAGTTCACCCCAAAACTCCA+AGG 0.620017 1.2:-8001442 None:intergenic
GGAGAATGAATAATAGGTGG+TGG 0.626803 1.2:-8002754 None:intergenic
CATTTGATAAAGAAGGGGAG+AGG 0.627315 1.2:-8001265 None:intergenic
TGTTAAATGAAGGATGGAGA+AGG 0.629322 1.2:+8002612 MS.gene016085:intron
ATCACCATTTGATAAAGAAG+GGG 0.630121 1.2:-8001270 None:intergenic
TCAAAGCAGCTACTCAAAAG+GGG 0.631039 1.2:+8001182 MS.gene016085:CDS
GAGTGAGAGAGATGGCTGGG+AGG 0.637450 1.2:+8001083 None:intergenic
ATATCCAGCAGAGATTATTG+AGG 0.645158 1.2:+8002991 MS.gene016085:CDS
GCAGCAATAGCTATTGACAA+AGG 0.666684 1.2:-8003502 None:intergenic
ATTGGAGAATGAATAATAGG+TGG 0.670121 1.2:-8002757 None:intergenic
AAGACACTAGTACTCCACAT+AGG 0.673627 1.2:-8003027 None:intergenic
TAAAGAGTGATATATAAACA+GGG 0.722232 1.2:-8003477 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATAATATTACTTAAAAAA+TGG - chr1.2:8001491-8001510 None:intergenic 10.0%
!!! ATTTTAATGTTTTATTTGTT+CGG - chr1.2:8002015-8002034 None:intergenic 10.0%
!!! TTTTTTTTTCAATATTATGT+AGG - chr1.2:8002479-8002498 None:intergenic 10.0%
!! AAAACTTAACAAAAAAGTAA+GGG - chr1.2:8003587-8003606 None:intergenic 15.0%
!! TAAAACTTAACAAAAAAGTA+AGG - chr1.2:8003588-8003607 None:intergenic 15.0%
!! TGAAATTTGTATTTAGTAAT+GGG + chr1.2:8001800-8001819 MS.gene016085:intron 15.0%
!! TTAAATATGCATATTTATGA+AGG + chr1.2:8001369-8001388 MS.gene016085:intron 15.0%
!!! AAAACATATTAATTTTTAGG+TGG + chr1.2:8002102-8002121 MS.gene016085:intron 15.0%
!!! AAACAGATGAAAATTTTATT+GGG + chr1.2:8001956-8001975 MS.gene016085:intron 15.0%
!!! AAACATATTAATTTTTAGGT+GGG + chr1.2:8002103-8002122 MS.gene016085:intron 15.0%
!!! AAATAATATTCGATTTTATG+AGG + chr1.2:8002404-8002423 MS.gene016085:intron 15.0%
!!! TACACAATATCTATAATTTT+TGG + chr1.2:8003345-8003364 MS.gene016085:intron 15.0%
!!! TTTTAATGTTTTATTTGTTC+GGG - chr1.2:8002014-8002033 None:intergenic 15.0%
!!! TTTTTATTGTGAAACAATAT+TGG + chr1.2:8002588-8002607 MS.gene016085:intron 15.0%
!! AATGATATTTGTCTCATTTA+GGG + chr1.2:8003823-8003842 MS.gene016085:intron 20.0%
!! AATTATCACTGAAACTAAAT+TGG + chr1.2:8003251-8003270 MS.gene016085:intron 20.0%
!! ATTATAGATATTGTGTACTT+TGG - chr1.2:8003342-8003361 None:intergenic 20.0%
!! CAATAAAATTCTAGGTTTAT+CGG + chr1.2:8002190-8002209 MS.gene016085:intron 20.0%
!! CATTACTAAATACAAATTTC+AGG - chr1.2:8001801-8001820 None:intergenic 20.0%
!! CTAATAGTTGTTCTTTATAA+GGG + chr1.2:8002700-8002719 MS.gene016085:CDS 20.0%
!! CTGAAATTTGTATTTAGTAA+TGG + chr1.2:8001799-8001818 MS.gene016085:intron 20.0%
!! CTTATAAAGAACAACTATTA+GGG - chr1.2:8002701-8002720 None:intergenic 20.0%
!! GAAAAAAAAACTTCAAGATT+AGG + chr1.2:8002134-8002153 MS.gene016085:intron 20.0%
!! TAAAGAGTGATATATAAACA+GGG - chr1.2:8003480-8003499 None:intergenic 20.0%
!! TCAAAAACTCAAATTCTTAA+AGG - chr1.2:8001468-8001487 None:intergenic 20.0%
!! TTAAAGAGTGATATATAAAC+AGG - chr1.2:8003481-8003500 None:intergenic 20.0%
!!! AAAAATAACATTTTTTCGGT+TGG + chr1.2:8002495-8002514 MS.gene016085:intron 20.0%
!!! AAAATAACATTTTTTCGGTT+GGG + chr1.2:8002496-8002515 MS.gene016085:intron 20.0%
!!! AAAATTTTAATCTTCATGCA+GGG + chr1.2:8003397-8003416 MS.gene016085:intron 20.0%
!!! AAACCATTTTTGTATCTTTT+AGG - chr1.2:8001925-8001944 None:intergenic 20.0%
!!! AATCTTGAAGTTTTTTTTTC+CGG - chr1.2:8002134-8002153 None:intergenic 20.0%
!!! CAAACAGATGAAAATTTTAT+TGG + chr1.2:8001955-8001974 MS.gene016085:intron 20.0%
!!! CAATAAAATTTTCATCTGTT+TGG - chr1.2:8001957-8001976 None:intergenic 20.0%
!!! CAGATTTCATATTATTGTTT+TGG - chr1.2:8002335-8002354 None:intergenic 20.0%
!!! GATTTTATGAGGTTTTTATT+TGG + chr1.2:8002415-8002434 MS.gene016085:intron 20.0%
!!! TTATTAGCTTGTGATTAATT+TGG + chr1.2:8001871-8001890 MS.gene016085:intron 20.0%
! AACGTAAGCAATAAAATTCT+AGG + chr1.2:8002182-8002201 MS.gene016085:intron 25.0%
! AATAAGAAGTGAGAAAAACA+AGG - chr1.2:8003670-8003689 None:intergenic 25.0%
! ACTTGATCTGTAAGAAAAAT+GGG - chr1.2:8002286-8002305 None:intergenic 25.0%
! AGTTTCAGTGATAATTCAAA+AGG - chr1.2:8003247-8003266 None:intergenic 25.0%
! AGTTTCTTATTGTTCCAATA+TGG + chr1.2:8002833-8002852 MS.gene016085:CDS 25.0%
! CAATGATATTTGTCTCATTT+AGG + chr1.2:8003822-8003841 MS.gene016085:intron 25.0%
! CCTAATAGTTGTTCTTTATA+AGG + chr1.2:8002699-8002718 MS.gene016085:CDS 25.0%
! CCTTATAAAGAACAACTATT+AGG - chr1.2:8002702-8002721 None:intergenic 25.0%
! GTTCCTAAAAGATACAAAAA+TGG + chr1.2:8001919-8001938 MS.gene016085:intron 25.0%
! GTTTCAGTGATAATTCAAAA+GGG - chr1.2:8003246-8003265 None:intergenic 25.0%
! TTCATACAATTTGATGAACA+TGG + chr1.2:8001834-8001853 MS.gene016085:intron 25.0%
! TTCTTATTGGTCAAAAACAA+TGG + chr1.2:8003682-8003701 MS.gene016085:intron 25.0%
!! AAATTTTCATCTGTTTGGAT+TGG - chr1.2:8001952-8001971 None:intergenic 25.0%
!! AATTTTATTGCTTACGTTGT+TGG - chr1.2:8002180-8002199 None:intergenic 25.0%
!! AATTTTCATCTGTTTGGATT+GGG - chr1.2:8001951-8001970 None:intergenic 25.0%
!! AGATGAAAATTTTATTGGGT+CGG + chr1.2:8001960-8001979 MS.gene016085:intron 25.0%
!! CAATATTGGTTGTTAAATGA+AGG + chr1.2:8002602-8002621 MS.gene016085:intron 25.0%
!! TAATCATGTTTTGTCATTGA+CGG - chr1.2:8002073-8002092 None:intergenic 25.0%
!! TAATTTTGTGTGTTTCACTA+TGG + chr1.2:8002553-8002572 MS.gene016085:intron 25.0%
!! TCTTTTAGTGCTATATTTCT+TGG + chr1.2:8003526-8003545 MS.gene016085:CDS 25.0%
!! TTTCTCTTCTAGAAAATTGA+AGG + chr1.2:8003799-8003818 MS.gene016085:intron 25.0%
!!! AGAAATTGTTGCTTGTTATT+TGG - chr1.2:8003372-8003391 None:intergenic 25.0%
!!! AGGATTTTATGCTGTTTTAT+GGG + chr1.2:8003926-8003945 MS.gene016085:CDS 25.0%
!!! ATCTTGAAGTTTTTTTTTCC+GGG - chr1.2:8002133-8002152 None:intergenic 25.0%
!!! GAAAATTTTAATCTTCATGC+AGG + chr1.2:8003396-8003415 MS.gene016085:intron 25.0%
!!! GGATATTTTTCAAATGCTTA+CGG + chr1.2:8001738-8001757 MS.gene016085:intron 25.0%
!!! GGTTTTTATTTGGATTAGTT+TGG + chr1.2:8002425-8002444 MS.gene016085:intron 25.0%
!!! GTATTTTTATACAACCTATG+TGG + chr1.2:8003013-8003032 MS.gene016085:CDS 25.0%
!!! TAGGATTTTATGCTGTTTTA+TGG + chr1.2:8003925-8003944 MS.gene016085:CDS 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG + chr1.2:8003669-8003688 MS.gene016085:intron 25.0%
AAAACAATGGAGAGAGAAAA+AGG + chr1.2:8003695-8003714 MS.gene016085:intron 30.0%
AAAATTCTAGGTTTATCGGA+CGG + chr1.2:8002194-8002213 MS.gene016085:intron 30.0%
AAGATTAGAGACATGTTCAA+AGG - chr1.2:8001410-8001429 None:intergenic 30.0%
AATGCATTCATAGAGAAGAA+TGG - chr1.2:8001325-8001344 None:intergenic 30.0%
ACAGAATCAAATTGGATTCT+TGG + chr1.2:8002790-8002809 MS.gene016085:CDS 30.0%
ACCTGAATAATGTACCATAT+TGG - chr1.2:8002850-8002869 None:intergenic 30.0%
ACTAAATTGGTCAACTCAAA+AGG + chr1.2:8003264-8003283 MS.gene016085:intron 30.0%
AGATCACCATTTGATAAAGA+AGG - chr1.2:8001275-8001294 None:intergenic 30.0%
ATCACCATTTGATAAAGAAG+GGG - chr1.2:8001273-8001292 None:intergenic 30.0%
ATGGAGATCATTGTTATATC+AGG - chr1.2:8003103-8003122 None:intergenic 30.0%
ATTGGAGAATGAATAATAGG+TGG - chr1.2:8002760-8002779 None:intergenic 30.0%
ATTGGTTGTTAAATGAAGGA+TGG + chr1.2:8002606-8002625 MS.gene016085:intron 30.0%
CATATTTATGAAGGTCAAGA+GGG + chr1.2:8001378-8001397 MS.gene016085:intron 30.0%
CTTGATCTGTAAGAAAAATG+GGG - chr1.2:8002285-8002304 None:intergenic 30.0%
GACTTGATCTGTAAGAAAAA+TGG - chr1.2:8002287-8002306 None:intergenic 30.0%
GATCACCATTTGATAAAGAA+GGG - chr1.2:8001274-8001293 None:intergenic 30.0%
GGAGCAGTAATAATATCAAT+AGG + chr1.2:8003906-8003925 MS.gene016085:CDS 30.0%
GTGATTGGAGAATGAATAAT+AGG - chr1.2:8002763-8002782 None:intergenic 30.0%
TAAGGAAAATTGTGAGCTAA+TGG + chr1.2:8002217-8002236 MS.gene016085:intron 30.0%
TCAACAAAGTTGTCATCAAA+TGG - chr1.2:8003644-8003663 None:intergenic 30.0%
TCCAATATGGTACATTATTC+AGG + chr1.2:8002846-8002865 MS.gene016085:CDS 30.0%
TGTAAAAGCAGGTATAAGAT+TGG - chr1.2:8001628-8001647 None:intergenic 30.0%
TTTGATAAATTGTGTGAGTG+AGG + chr1.2:8001531-8001550 MS.gene016085:intron 30.0%
! AATCATGTTTTGTCATTGAC+GGG - chr1.2:8002072-8002091 None:intergenic 30.0%
! AATTTTTCTCCTTGGAGTTT+TGG + chr1.2:8001433-8001452 MS.gene016085:CDS 30.0%
! ATCTTCAGAATTTTTCTCCT+TGG + chr1.2:8001425-8001444 MS.gene016085:CDS 30.0%
! ATTTTTCTCCTTGGAGTTTT+GGG + chr1.2:8001434-8001453 MS.gene016085:CDS 30.0%
! GATGAAAATTTTATTGGGTC+GGG + chr1.2:8001961-8001980 MS.gene016085:intron 30.0%
! TAAAATTTTACCTACCCTGA+TGG + chr1.2:8002029-8002048 MS.gene016085:intron 30.0%
! TTCAAATTTTGCAGTGTAGT+TGG + chr1.2:8003885-8003904 MS.gene016085:intron 30.0%
!! AATGGACTAAAAAAAGTGAG+TGG + chr1.2:8002235-8002254 MS.gene016085:intron 30.0%
!!! AACCACTTTTTGACAACTTT+TGG - chr1.2:8003767-8003786 None:intergenic 30.0%
!!! GATTTTATGCTGTTTTATGG+GGG + chr1.2:8003928-8003947 MS.gene016085:CDS 30.0%
!!! GGATTTTATGCTGTTTTATG+GGG + chr1.2:8003927-8003946 MS.gene016085:CDS 30.0%
AAGAAATCACTTGCTTGAAC+AGG + chr1.2:8001712-8001731 MS.gene016085:intron 35.0%
AAGAGTAGAGTAAGAGAGAT+AGG - chr1.2:8001677-8001696 None:intergenic 35.0%
AATACCTCAATAATCTCTGC+TGG - chr1.2:8002998-8003017 None:intergenic 35.0%
AATGATCTCCATCATATGCT+CGG + chr1.2:8003111-8003130 MS.gene016085:CDS 35.0%
ACTTGGGGACTACATATTAA+AGG + chr1.2:8003454-8003473 MS.gene016085:CDS 35.0%
AGGATGGAGAAGGTAAAATT+AGG + chr1.2:8002622-8002641 MS.gene016085:intron 35.0%
AGTGGAGACAACAAATGAAT+AGG - chr1.2:8001230-8001249 None:intergenic 35.0%
ATAACAGTTGTCTGTTTGCA+AGG - chr1.2:8002965-8002984 None:intergenic 35.0%
ATATCCAGCAGAGATTATTG+AGG + chr1.2:8002991-8003010 MS.gene016085:CDS 35.0%
ATCTGTAAGAAAAATGGGGA+GGG - chr1.2:8002281-8002300 None:intergenic 35.0%
ATTAGAGACATGTTCAAAGG+AGG - chr1.2:8001407-8001426 None:intergenic 35.0%
ATTCAAAGCAGCTACTCAAA+AGG + chr1.2:8001180-8001199 MS.gene016085:CDS 35.0%
CCAATTTGATTCTGTTGTTG+AGG - chr1.2:8002785-8002804 None:intergenic 35.0%
CCTCAACAACAGAATCAAAT+TGG + chr1.2:8002782-8002801 MS.gene016085:CDS 35.0%
GAATCAAATTGGATTCTTGG+TGG + chr1.2:8002793-8002812 MS.gene016085:CDS 35.0%
GCATATTTATGAAGGTCAAG+AGG + chr1.2:8001377-8001396 MS.gene016085:intron 35.0%
GGTTCTACGGTATCAATATT+AGG + chr1.2:8002673-8002692 MS.gene016085:CDS 35.0%
GTCATCATTCGATTCTTCTT+TGG - chr1.2:8003958-8003977 None:intergenic 35.0%
GTCCAAAAGTTGTCAAAAAG+TGG + chr1.2:8003762-8003781 MS.gene016085:intron 35.0%
TAGAACCAAACTTGAATGCT+TGG + chr1.2:8003068-8003087 MS.gene016085:CDS 35.0%
TGGAGAAGGTAAAATTAGGA+TGG + chr1.2:8002626-8002645 MS.gene016085:CDS 35.0%
TGTTAAATGAAGGATGGAGA+AGG + chr1.2:8002612-8002631 MS.gene016085:intron 35.0%
TTCAAAGCAGCTACTCAAAA+GGG + chr1.2:8001181-8001200 MS.gene016085:CDS 35.0%
TTCTACAGGACTAAGTTGTT+TGG + chr1.2:8003426-8003445 MS.gene016085:CDS 35.0%
TTTCTTTACCGAGCATATGA+TGG - chr1.2:8003122-8003141 None:intergenic 35.0%
! AAGTTGTTTGGTTCACACTT+GGG + chr1.2:8003438-8003457 MS.gene016085:CDS 35.0%
! ATCTTCCAAGCATTCAAGTT+TGG - chr1.2:8003076-8003095 None:intergenic 35.0%
! GGTTCTAGTAGTAAGCATAT+TGG - chr1.2:8003055-8003074 None:intergenic 35.0%
! TAAGTTGTTTGGTTCACACT+TGG + chr1.2:8003437-8003456 MS.gene016085:CDS 35.0%
! TGTTTTACGACCACTCAAAT+CGG - chr1.2:8002360-8002379 None:intergenic 35.0%
! TTTTTCTCCTTGGAGTTTTG+GGG + chr1.2:8001435-8001454 MS.gene016085:CDS 35.0%
AAGACACTAGTACTCCACAT+AGG - chr1.2:8003030-8003049 None:intergenic 40.0%
AAGCAGTCAAGCAAAGATCT+TGG + chr1.2:8002651-8002670 MS.gene016085:CDS 40.0%
AATCACTTGCTTGAACAGGA+AGG + chr1.2:8001716-8001735 MS.gene016085:intron 40.0%
AGCAAAGATCTTGGGTTCTA+CGG + chr1.2:8002660-8002679 MS.gene016085:CDS 40.0%
AGCAGTCAAGCAAAGATCTT+GGG + chr1.2:8002652-8002671 MS.gene016085:CDS 40.0%
ATCACTTGCTTGAACAGGAA+GGG + chr1.2:8001717-8001736 MS.gene016085:intron 40.0%
ATTGCAACCATTGCTGTGAA+TGG - chr1.2:8001130-8001149 None:intergenic 40.0%
CATTTGATAAAGAAGGGGAG+AGG - chr1.2:8001268-8001287 None:intergenic 40.0%
CTCTCCCCTTCTTTATCAAA+TGG + chr1.2:8001266-8001285 MS.gene016085:CDS 40.0%
GAAAGAGATGAAGCAAGAGT+AGG - chr1.2:8001606-8001625 None:intergenic 40.0%
GATCTGTAAGAAAAATGGGG+AGG - chr1.2:8002282-8002301 None:intergenic 40.0%
GATTCTGTTGTTGAGGTGAT+TGG - chr1.2:8002778-8002797 None:intergenic 40.0%
GCAAACCAACTCAAGAAACA+TGG + chr1.2:8002309-8002328 MS.gene016085:intron 40.0%
GCAGCAATAGCTATTGACAA+AGG - chr1.2:8003505-8003524 None:intergenic 40.0%
GCTAGGATGAATGTAAAAGC+AGG - chr1.2:8001639-8001658 None:intergenic 40.0%
GCTCAGCTCTTTGGATATAA+AGG + chr1.2:8001564-8001583 MS.gene016085:CDS 40.0%
GGAGAATGAATAATAGGTGG+TGG - chr1.2:8002757-8002776 None:intergenic 40.0%
TCAAAGCAGCTACTCAAAAG+GGG + chr1.2:8001182-8001201 MS.gene016085:CDS 40.0%
TTGCAACCATTGCTGTGAAT+GGG - chr1.2:8001129-8001148 None:intergenic 40.0%
TTTGGCCATGTTTCTTGAGT+TGG - chr1.2:8002317-8002336 None:intergenic 40.0%
! AGTTGTTTGGTTCACACTTG+GGG + chr1.2:8003439-8003458 MS.gene016085:CDS 40.0%
! ATGCAGGGATTCTTTTCTAC+AGG + chr1.2:8003412-8003431 MS.gene016085:intron 40.0%
! GATGGTGAGGGTATGATTAT+TGG - chr1.2:8002727-8002746 None:intergenic 40.0%
! TCATCCTAGCTACCATTTTC+AGG + chr1.2:8001649-8001668 MS.gene016085:CDS 40.0%
!!! AATTTTTAGGTGGGTTGACC+CGG + chr1.2:8002112-8002131 MS.gene016085:intron 40.0%
AAGTTCACCCCAAAACTCCA+AGG - chr1.2:8001445-8001464 None:intergenic 45.0%
AGAGTTGTAGCTCAGCTCTT+TGG + chr1.2:8001555-8001574 MS.gene016085:intron 45.0%
AGGCAAAAGGAGAACAAGAG+TGG - chr1.2:8001248-8001267 None:intergenic 45.0%
ATTGGGTCGGGTAATGAGTA+TGG + chr1.2:8001973-8001992 MS.gene016085:intron 45.0%
GAGAGATAGGCACCTGAAAA+TGG - chr1.2:8001664-8001683 None:intergenic 45.0%
GCAATAGAGTGCACAAACGT+TGG + chr1.2:8001145-8001164 MS.gene016085:CDS 45.0%
TAAAGAAGGGGAGAGGCAAA+AGG - chr1.2:8001261-8001280 None:intergenic 45.0%
TCTAGGTTTATCGGACGGTA+AGG + chr1.2:8002199-8002218 MS.gene016085:intron 45.0%
! ATAGGTGGTGGTTGTGTTGA+TGG - chr1.2:8002745-8002764 None:intergenic 45.0%
! GAAATCTGCTCCGATTTGAG+TGG + chr1.2:8002347-8002366 MS.gene016085:intron 45.0%
!! TACCTACCCTGATGGATTGA+CGG + chr1.2:8002037-8002056 MS.gene016085:intron 45.0%
!!! CTTGGTGATGCACTGCATTT+TGG + chr1.2:8003544-8003563 MS.gene016085:CDS 45.0%
!!! AAAAAAAAATAACATTTTTT+CGG + chr1.2:8002491-8002510 MS.gene016085:intron 5.0%
!!! AATAAAACATATTAATTTTT+AGG + chr1.2:8002099-8002118 MS.gene016085:intron 5.0%
AACCAGTCCGTCAATCCATC+AGG - chr1.2:8002047-8002066 None:intergenic 50.0%
ACCAGTCCGTCAATCCATCA+GGG - chr1.2:8002046-8002065 None:intergenic 50.0%
GGCACCTGAAAATGGTAGCT+AGG - chr1.2:8001656-8001675 None:intergenic 50.0%
TGTGCTCCCATTCACAGCAA+TGG + chr1.2:8001120-8001139 MS.gene016085:CDS 50.0%
!! GGTGGTTGTGTTGATGGTGA+GGG - chr1.2:8002739-8002758 None:intergenic 50.0%
!! TGGTGGTTGTGTTGATGGTG+AGG - chr1.2:8002740-8002759 None:intergenic 50.0%
GTCCGTCAATCCATCAGGGT+AGG - chr1.2:8002042-8002061 None:intergenic 55.0%
!! ACCCTGATGGATTGACGGAC+TGG + chr1.2:8002042-8002061 MS.gene016085:intron 55.0%
!! GGCTGGGAGGCATTGTTACA+AGG + chr1.2:8001096-8001115 MS.gene016085:CDS 55.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 8001094 8003987 8001094 ID=MS.gene016085
chr1.2 mRNA 8001094 8003987 8001094 ID=MS.gene016085.t1;Parent=MS.gene016085
chr1.2 exon 8001094 8001287 8001094 ID=MS.gene016085.t1.exon1;Parent=MS.gene016085.t1
chr1.2 CDS 8001094 8001287 8001094 ID=cds.MS.gene016085.t1;Parent=MS.gene016085.t1
chr1.2 exon 8001391 8001456 8001391 ID=MS.gene016085.t1.exon2;Parent=MS.gene016085.t1
chr1.2 CDS 8001391 8001456 8001391 ID=cds.MS.gene016085.t1;Parent=MS.gene016085.t1
chr1.2 exon 8001557 8001670 8001557 ID=MS.gene016085.t1.exon3;Parent=MS.gene016085.t1
chr1.2 CDS 8001557 8001670 8001557 ID=cds.MS.gene016085.t1;Parent=MS.gene016085.t1
chr1.2 exon 8002624 8002867 8002624 ID=MS.gene016085.t1.exon4;Parent=MS.gene016085.t1
chr1.2 CDS 8002624 8002867 8002624 ID=cds.MS.gene016085.t1;Parent=MS.gene016085.t1
chr1.2 exon 8002974 8003132 8002974 ID=MS.gene016085.t1.exon5;Parent=MS.gene016085.t1
chr1.2 CDS 8002974 8003132 8002974 ID=cds.MS.gene016085.t1;Parent=MS.gene016085.t1
chr1.2 exon 8003418 8003569 8003418 ID=MS.gene016085.t1.exon6;Parent=MS.gene016085.t1
chr1.2 CDS 8003418 8003569 8003418 ID=cds.MS.gene016085.t1;Parent=MS.gene016085.t1
chr1.2 exon 8003899 8003987 8003899 ID=MS.gene016085.t1.exon7;Parent=MS.gene016085.t1
chr1.2 CDS 8003899 8003987 8003899 ID=cds.MS.gene016085.t1;Parent=MS.gene016085.t1
Gene Sequence

>MS.gene016085

ATGGCTGGGAGGCATTGTTACAAGGATGTGCTCCCATTCACAGCAATGGTTGCAATAGAGTGCACAAACGTTGGTGTCAGTGTTCTATTCAAAGCAGCTACTCAAAAGGGGTTGAGTTATTATGTCTTCATTGCCTATTCATTTGTTGTCTCCACTCTTGTTCTCCTTTTGCCTCTCCCCTTCTTTATCAAATGGTGATCTCTTTTTACATATTTATTAGTAACTGAACCATTCTTCTCTATGAATGCATTTTTCATTTTTTTTCTACTCACAACTTAAATATGCATATTTATGAAGGTCAAGAGGGCTTCCTCCTTTGAACATGTCTCTAATCTTCAGAATTTTTCTCCTTGGAGTTTTGGGGTGAACTTCCTTTAAGAATTTGAGTTTTTGACCATTTTTTAAGTAATATTATTCTTGATCTTGATTTTGTTTAATTTGATAAATTGTGTGAGTGAGGCAGAGTTGTAGCTCAGCTCTTTGGATATAAAGGACTTGAATACACAACACCTACTCTTGCTTCATCTCTTTCCAATCTTATACCTGCTTTTACATTCATCCTAGCTACCATTTTCAGGTGCCTATCTCTCTTACTCTACTCTTGAAAACTAGATACGAAAGAAATCACTTGCTTGAACAGGAAGGGATATTTTTCAAATGCTTACGGTTCAATTTCAATAATATATATGATGTTTGTCAACATGCCTGAAATTTGTATTTAGTAATGGGTTAATACATGATTCATACAATTTGATGAACATGGTGAAGTTTTGCAAATTATTAGCTTGTGATTAATTTGGCATTTAAACATTTCTTGCAAATTGTGTTCCTAAAAGATACAAAAATGGTTTTGACCCAATCCAAACAGATGAAAATTTTATTGGGTCGGGTAATGAGTATGGTCAAAATCAACTCAACCCGAACAAATAAAACATTAAAATTTTACCTACCCTGATGGATTGACGGACTGGTTGACCCGTCAATGACAAAACATGATTAAATACAAATAAAACATATTAATTTTTAGGTGGGTTGACCCGGAAAAAAAAACTTCAAGATTAGGCTAATAAAATTCAACGTTATCCAACAACGTAAGCAATAAAATTCTAGGTTTATCGGACGGTAAGGAAAATTGTGAGCTAATGGACTAAAAAAAGTGAGTGGTAAAAAAGAACTAAAAATAACCCTCCCCATTTTTCTTACAGATCAAGTCTAGCAAACCAACTCAAGAAACATGGCCAAAACAATAATATGAAATCTGCTCCGATTTGAGTGGTCGTAAAACATGAAAATCTCATTCTCAAAGCATCAAATAATATTCGATTTTATGAGGTTTTTATTTGGATTAGTTTGGATGTGAACATCTATAGTATGATTTTCATCCTACATAATATTGAAAAAAAAAATAACATTTTTTCGGTTGGGCATTTTCTTTAAAATCATAAAAATTAGACTATTTTAATTTTGTGTGTTTCACTATGGTTACTTGCTATGTTTTTATTGTGAAACAATATTGGTTGTTAAATGAAGGATGGAGAAGGTAAAATTAGGATGGAAAAGCAGTCAAGCAAAGATCTTGGGTTCTACGGTATCAATATTAGGTGCCCTAATAGTTGTTCTTTATAAGGGTCCAATAATCATACCCTCACCATCAACACAACCACCACCTATTATTCATTCTCCAATCACCTCAACAACAGAATCAAATTGGATTCTTGGTGGATCTCTACTTGTTATTGAGTTTCTTATTGTTCCAATATGGTACATTATTCAGGTATATTGAATTCACTAAAAAGCTCTAAACAATGATTTGAAGCACATTGTGAATTTTCGATTTTTCATGTAAATTACTAACATAAAATTTTGTTCCTTGCAAACAGACAACTGTTATAAAACAATATCCAGCAGAGATTATTGAGGTATTTTTATACAACCTATGTGGAGTACTAGTGTCTTTACCAATATGCTTACTACTAGAACCAAACTTGAATGCTTGGAAGATAAATCCTGATATAACAATGATCTCCATCATATGCTCGGTAAAGAAATGAATTATCTCAATTTGTAGATTTTTTTTTTAATTTAGTTTATGAAATTTATGAATTTAAAAAATTATTTATAATTTGTGAAATATTTTGATCATATTAGTCCCTTTTGAATTATCACTGAAACTAAATTGGTCAACTCAAAAGGATTAACTTAATATAATATTTTCAATTTCTATTTTATTTAAATTTTAGATACACCAAAGTACACAATATCTATAATTTTTGGACCAAATAACAAGCAACAATTTCTAGCTGAAAATTTTAATCTTCATGCAGGGATTCTTTTCTACAGGACTAAGTTGTTTGGTTCACACTTGGGGACTACATATTAAAGGCCCTGTTTATATATCACTCTTTAAGCCTTTGTCAATAGCTATTGCTGCATCTTTTAGTGCTATATTTCTTGGTGATGCACTGCATTTTGGAACGTACGTGTTTCATTCCCTTACTTTTTTGTTAAGTTTTAACTATTCTAGAAAGAGTAATGATATTTTGACATCCATTTGATGACAACTTTGTTGACAACCTTGTTTTTCTCACTTCTTATTGGTCAAAAACAATGGAGAGAGAAAAAGGAAGAGAGAGAATAACAATATCATGTGAGTATGAGAGAGAAAGTTGTCCAAAAGTTGTCAAAAAGTGGTTGTCAAAATATCATTTCTCTTCTAGAAAATTGAAGGCAATGATATTTGTCTCATTTAGGGTATTTTGTTATTTGCACTTTTAACATATGCAATTTATTTTTCAAATTTTGCAGTGTAGTTGGAGCAGTAATAATATCAATAGGATTTTATGCTGTTTTATGGGGGAAATCCAAAGAAGAATCGAATGATGACTTTGAAATAG
Protein sequence

>MS.gene016085.t1

MAGRHCYKDVLPFTAMVAIECTNVGVSVLFKAATQKGLSYYVFIAYSFVVSTLVLLLPLPFFIKWSRGLPPLNMSLIFRIFLLGVLGVVAQLFGYKGLEYTTPTLASSLSNLIPAFTFILATIFRMEKVKLGWKSSQAKILGSTVSILGALIVVLYKGPIIIPSPSTQPPPIIHSPITSTTESNWILGGSLLVIEFLIVPIWYIIQTTVIKQYPAEIIEVFLYNLCGVLVSLPICLLLEPNLNAWKINPDITMISIICSGFFSTGLSCLVHTWGLHIKGPVYISLFKPLSIAIAASFSAIFLGDALHFGTVVGAVIISIGFYAVLWGKSKEESNDDFEI