Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031882.t1 | XP_003601053.1 | 96.9 | 392 | 12 | 0 | 1 | 392 | 1 | 392 | 1.30E-212 | 748.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031882.t1 | Q501F8 | 63.6 | 371 | 125 | 3 | 13 | 376 | 3 | 370 | 1.4e-127 | 457.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031882.t1 | G7J311 | 96.9 | 392 | 12 | 0 | 1 | 392 | 1 | 392 | 9.1e-213 | 748.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene031882 | MS.gene016085 | PPI |
MS.gene031882 | MS.gene051484 | PPI |
MS.gene33118 | MS.gene031882 | PPI |
MS.gene031882 | MS.gene055334 | PPI |
MS.gene031882 | MS.gene016084 | PPI |
MS.gene016080 | MS.gene031882 | PPI |
MS.gene022545 | MS.gene031882 | PPI |
MS.gene33120 | MS.gene031882 | PPI |
MS.gene031882 | MS.gene051482 | PPI |
MS.gene031882 | MS.gene62756 | PPI |
MS.gene055336 | MS.gene031882 | PPI |
MS.gene031882 | MS.gene91824 | PPI |
MS.gene022543 | MS.gene031882 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031882.t1 | MTR_3g072500 | 96.939 | 392 | 12 | 0 | 1 | 392 | 1 | 392 | 0.0 | 785 |
MS.gene031882.t1 | MTR_1g030580 | 77.957 | 372 | 76 | 5 | 9 | 380 | 7 | 372 | 0.0 | 596 |
MS.gene031882.t1 | MTR_3g072500 | 96.194 | 289 | 11 | 0 | 104 | 392 | 1 | 289 | 0.0 | 574 |
MS.gene031882.t1 | MTR_3g072500 | 98.134 | 268 | 5 | 0 | 1 | 268 | 1 | 268 | 0.0 | 546 |
MS.gene031882.t1 | MTR_3g072500 | 97.674 | 215 | 5 | 0 | 1 | 215 | 1 | 215 | 7.31e-156 | 438 |
MS.gene031882.t1 | MTR_3g072530 | 50.543 | 368 | 167 | 4 | 1 | 361 | 1 | 360 | 3.18e-133 | 386 |
MS.gene031882.t1 | MTR_7g100050 | 52.857 | 350 | 156 | 3 | 20 | 365 | 13 | 357 | 2.89e-128 | 374 |
MS.gene031882.t1 | MTR_1g068630 | 51.149 | 348 | 162 | 3 | 16 | 362 | 11 | 351 | 1.36e-123 | 362 |
MS.gene031882.t1 | MTR_3g072560 | 46.791 | 374 | 192 | 3 | 20 | 390 | 18 | 387 | 1.48e-117 | 347 |
MS.gene031882.t1 | MTR_1g030600 | 49.254 | 335 | 169 | 1 | 14 | 347 | 12 | 346 | 6.51e-114 | 338 |
MS.gene031882.t1 | MTR_8g041390 | 45.093 | 377 | 194 | 5 | 16 | 389 | 9 | 375 | 1.14e-112 | 335 |
MS.gene031882.t1 | MTR_3g012420 | 46.257 | 374 | 192 | 5 | 20 | 390 | 17 | 384 | 1.21e-112 | 335 |
MS.gene031882.t1 | MTR_0096s0100 | 43.804 | 347 | 189 | 3 | 14 | 359 | 12 | 353 | 2.04e-107 | 320 |
MS.gene031882.t1 | MTR_3g072520 | 40.827 | 387 | 218 | 3 | 13 | 389 | 2 | 387 | 1.99e-98 | 298 |
MS.gene031882.t1 | MTR_1g074120 | 40.058 | 342 | 198 | 3 | 17 | 355 | 13 | 350 | 8.93e-87 | 267 |
MS.gene031882.t1 | MTR_1g051120 | 38.968 | 349 | 196 | 4 | 17 | 356 | 13 | 353 | 2.36e-86 | 266 |
MS.gene031882.t1 | MTR_1g074160 | 40.120 | 334 | 187 | 3 | 16 | 344 | 9 | 334 | 1.17e-85 | 264 |
MS.gene031882.t1 | MTR_1g074070 | 38.182 | 330 | 199 | 3 | 16 | 344 | 12 | 337 | 4.11e-83 | 258 |
MS.gene031882.t1 | MTR_1g074020 | 40.000 | 330 | 193 | 3 | 16 | 344 | 9 | 334 | 1.30e-82 | 256 |
MS.gene031882.t1 | MTR_1g073990 | 38.905 | 347 | 202 | 3 | 17 | 362 | 13 | 350 | 3.53e-82 | 255 |
MS.gene031882.t1 | MTR_3g072530 | 42.763 | 304 | 130 | 4 | 1 | 268 | 1 | 296 | 4.16e-81 | 251 |
MS.gene031882.t1 | MTR_1g070175 | 37.202 | 336 | 195 | 2 | 17 | 347 | 13 | 337 | 4.51e-81 | 253 |
MS.gene031882.t1 | MTR_3g112480 | 37.092 | 337 | 201 | 2 | 17 | 342 | 17 | 353 | 7.02e-79 | 248 |
MS.gene031882.t1 | MTR_1g023180 | 32.615 | 371 | 230 | 2 | 17 | 369 | 18 | 386 | 3.44e-75 | 239 |
MS.gene031882.t1 | MTR_6g036450 | 33.429 | 347 | 226 | 3 | 15 | 357 | 11 | 356 | 1.58e-73 | 233 |
MS.gene031882.t1 | MTR_2g007990 | 35.584 | 385 | 227 | 5 | 9 | 389 | 4 | 371 | 2.38e-71 | 229 |
MS.gene031882.t1 | MTR_3g095460 | 33.934 | 333 | 219 | 1 | 16 | 347 | 1 | 333 | 5.50e-71 | 226 |
MS.gene031882.t1 | MTR_6g081840 | 35.802 | 324 | 206 | 1 | 29 | 350 | 19 | 342 | 4.09e-70 | 224 |
MS.gene031882.t1 | MTR_3g095420 | 31.933 | 357 | 230 | 4 | 16 | 368 | 3 | 350 | 6.54e-70 | 224 |
MS.gene031882.t1 | MTR_4g094340 | 34.746 | 354 | 218 | 4 | 13 | 357 | 2 | 351 | 1.22e-68 | 221 |
MS.gene031882.t1 | MTR_4g094340 | 34.734 | 357 | 220 | 4 | 10 | 357 | 17 | 369 | 1.59e-68 | 221 |
MS.gene031882.t1 | MTR_2g007970 | 35.780 | 327 | 210 | 0 | 19 | 345 | 11 | 337 | 4.55e-67 | 218 |
MS.gene031882.t1 | MTR_2g016710 | 33.516 | 364 | 227 | 5 | 20 | 376 | 8 | 363 | 1.93e-66 | 215 |
MS.gene031882.t1 | MTR_5g021160 | 33.333 | 345 | 222 | 4 | 17 | 357 | 4 | 344 | 2.84e-66 | 215 |
MS.gene031882.t1 | MTR_3g095450 | 34.104 | 346 | 214 | 4 | 18 | 359 | 3 | 338 | 9.15e-66 | 213 |
MS.gene031882.t1 | MTR_8g092650 | 33.134 | 335 | 220 | 1 | 16 | 346 | 1 | 335 | 3.69e-65 | 211 |
MS.gene031882.t1 | MTR_2g065550 | 34.986 | 363 | 218 | 5 | 21 | 381 | 11 | 357 | 5.21e-65 | 212 |
MS.gene031882.t1 | MTR_2g027030 | 33.233 | 331 | 221 | 0 | 15 | 345 | 7 | 337 | 1.48e-64 | 210 |
MS.gene031882.t1 | MTR_2g007960 | 34.384 | 349 | 221 | 3 | 19 | 360 | 11 | 358 | 7.93e-64 | 209 |
MS.gene031882.t1 | MTR_4g094342 | 34.769 | 325 | 205 | 3 | 16 | 335 | 9 | 331 | 1.79e-63 | 207 |
MS.gene031882.t1 | MTR_3g112480 | 38.078 | 281 | 163 | 2 | 73 | 342 | 18 | 298 | 9.41e-63 | 205 |
MS.gene031882.t1 | MTR_1g038560 | 33.923 | 339 | 213 | 4 | 20 | 352 | 3 | 336 | 1.51e-62 | 204 |
MS.gene031882.t1 | MTR_7g111830 | 34.503 | 342 | 205 | 4 | 18 | 347 | 5 | 339 | 5.97e-62 | 204 |
MS.gene031882.t1 | MTR_8g006120 | 34.521 | 365 | 220 | 6 | 21 | 381 | 11 | 360 | 8.78e-62 | 203 |
MS.gene031882.t1 | MTR_3g095440 | 32.609 | 368 | 231 | 4 | 18 | 381 | 3 | 357 | 1.13e-61 | 202 |
MS.gene031882.t1 | MTR_3g090550 | 36.513 | 304 | 188 | 3 | 44 | 347 | 30 | 328 | 1.19e-61 | 202 |
MS.gene031882.t1 | MTR_4g094362 | 32.320 | 362 | 242 | 1 | 9 | 367 | 3 | 364 | 1.19e-60 | 201 |
MS.gene031882.t1 | MTR_4g094352 | 35.015 | 337 | 213 | 3 | 16 | 346 | 8 | 344 | 3.88e-60 | 199 |
MS.gene031882.t1 | MTR_8g006010 | 34.579 | 321 | 206 | 3 | 21 | 340 | 11 | 328 | 1.17e-59 | 198 |
MS.gene031882.t1 | MTR_4g106720 | 32.923 | 325 | 204 | 2 | 45 | 363 | 37 | 353 | 8.61e-59 | 195 |
MS.gene031882.t1 | MTR_1g074160 | 38.911 | 257 | 144 | 3 | 16 | 267 | 9 | 257 | 1.74e-58 | 191 |
MS.gene031882.t1 | MTR_2g007260 | 33.531 | 337 | 215 | 3 | 16 | 345 | 10 | 344 | 3.83e-58 | 195 |
MS.gene031882.t1 | MTR_1g114210 | 30.887 | 327 | 217 | 3 | 20 | 343 | 11 | 331 | 3.59e-57 | 191 |
MS.gene031882.t1 | MTR_1g052205 | 40.693 | 231 | 121 | 4 | 133 | 359 | 13 | 231 | 2.78e-56 | 185 |
MS.gene031882.t1 | MTR_5g034990 | 33.235 | 340 | 216 | 6 | 7 | 344 | 2 | 332 | 3.14e-56 | 188 |
MS.gene031882.t1 | MTR_2g102340 | 32.448 | 339 | 224 | 4 | 19 | 356 | 11 | 345 | 4.48e-56 | 188 |
MS.gene031882.t1 | MTR_5g025370 | 33.431 | 341 | 211 | 2 | 17 | 342 | 7 | 346 | 7.01e-56 | 188 |
MS.gene031882.t1 | MTR_4g094340 | 34.722 | 288 | 176 | 3 | 79 | 357 | 1 | 285 | 2.07e-55 | 184 |
MS.gene031882.t1 | MTR_8g006090 | 33.956 | 321 | 209 | 2 | 21 | 340 | 12 | 330 | 2.01e-54 | 184 |
MS.gene031882.t1 | MTR_5g025340 | 31.707 | 369 | 234 | 4 | 20 | 372 | 10 | 376 | 7.76e-54 | 183 |
MS.gene031882.t1 | MTR_5g025400 | 32.615 | 371 | 231 | 4 | 19 | 372 | 10 | 378 | 8.98e-54 | 183 |
MS.gene031882.t1 | MTR_4g094360 | 29.917 | 361 | 247 | 3 | 9 | 363 | 3 | 363 | 1.34e-53 | 182 |
MS.gene031882.t1 | MTR_2g016710 | 33.663 | 303 | 189 | 3 | 20 | 318 | 8 | 302 | 2.96e-53 | 179 |
MS.gene031882.t1 | MTR_4g129650 | 29.706 | 340 | 229 | 4 | 21 | 356 | 9 | 342 | 8.31e-53 | 180 |
MS.gene031882.t1 | MTR_5g034910 | 33.025 | 324 | 203 | 5 | 25 | 342 | 12 | 327 | 2.12e-52 | 178 |
MS.gene031882.t1 | MTR_0103s0090 | 35.197 | 304 | 189 | 5 | 46 | 346 | 37 | 335 | 2.93e-52 | 178 |
MS.gene031882.t1 | MTR_1g030400 | 30.952 | 336 | 212 | 3 | 29 | 353 | 16 | 342 | 3.29e-52 | 178 |
MS.gene031882.t1 | MTR_5g025290 | 31.638 | 354 | 222 | 4 | 20 | 357 | 11 | 360 | 5.58e-52 | 178 |
MS.gene031882.t1 | MTR_5g025290 | 31.638 | 354 | 222 | 4 | 20 | 357 | 39 | 388 | 1.13e-51 | 178 |
MS.gene031882.t1 | MTR_5g034980 | 33.667 | 300 | 195 | 3 | 44 | 342 | 31 | 327 | 5.31e-51 | 174 |
MS.gene031882.t1 | MTR_5g021160 | 34.717 | 265 | 165 | 4 | 97 | 357 | 1 | 261 | 1.77e-50 | 171 |
MS.gene031882.t1 | MTR_5g034930 | 33.648 | 318 | 196 | 6 | 44 | 358 | 30 | 335 | 1.45e-48 | 168 |
MS.gene031882.t1 | MTR_8g006050 | 31.288 | 326 | 189 | 5 | 21 | 343 | 12 | 305 | 1.25e-47 | 166 |
MS.gene031882.t1 | MTR_5g025330 | 31.250 | 336 | 217 | 2 | 20 | 342 | 9 | 343 | 2.28e-47 | 170 |
MS.gene031882.t1 | MTR_8g006090 | 36.475 | 244 | 153 | 1 | 97 | 340 | 9 | 250 | 3.39e-47 | 162 |
MS.gene031882.t1 | MTR_3g112480 | 37.168 | 226 | 131 | 2 | 128 | 342 | 1 | 226 | 9.89e-47 | 161 |
MS.gene031882.t1 | MTR_1g014510 | 29.167 | 336 | 235 | 2 | 17 | 350 | 8 | 342 | 1.04e-46 | 166 |
MS.gene031882.t1 | MTR_0103s0090 | 37.295 | 244 | 147 | 3 | 105 | 346 | 5 | 244 | 5.64e-46 | 159 |
MS.gene031882.t1 | MTR_5g021160 | 32.576 | 264 | 168 | 5 | 17 | 276 | 4 | 261 | 5.85e-46 | 159 |
MS.gene031882.t1 | MTR_8g092650 | 34.263 | 251 | 161 | 1 | 100 | 346 | 7 | 257 | 1.10e-45 | 158 |
MS.gene031882.t1 | MTR_3g019050 | 28.571 | 322 | 221 | 2 | 23 | 340 | 21 | 337 | 1.14e-45 | 161 |
MS.gene031882.t1 | MTR_8g006090 | 32.441 | 299 | 199 | 2 | 21 | 318 | 12 | 308 | 3.22e-44 | 155 |
MS.gene031882.t1 | MTR_5g069040 | 26.857 | 350 | 249 | 3 | 23 | 365 | 21 | 370 | 6.20e-44 | 157 |
MS.gene031882.t1 | MTR_8g072350 | 29.464 | 336 | 223 | 2 | 20 | 342 | 9 | 343 | 1.01e-43 | 156 |
MS.gene031882.t1 | MTR_4g094360 | 31.502 | 273 | 181 | 3 | 97 | 363 | 44 | 316 | 1.28e-43 | 155 |
MS.gene031882.t1 | MTR_5g068790 | 27.273 | 319 | 231 | 1 | 23 | 340 | 21 | 339 | 2.32e-43 | 155 |
MS.gene031882.t1 | MTR_4g094340 | 33.846 | 260 | 164 | 3 | 13 | 268 | 2 | 257 | 6.09e-43 | 151 |
MS.gene031882.t1 | MTR_4g094340 | 33.840 | 263 | 166 | 3 | 10 | 268 | 17 | 275 | 6.60e-43 | 151 |
MS.gene031882.t1 | MTR_5g034970 | 34.251 | 327 | 193 | 6 | 24 | 347 | 11 | 318 | 7.84e-43 | 152 |
MS.gene031882.t1 | MTR_6g007743 | 30.183 | 328 | 208 | 6 | 45 | 364 | 37 | 351 | 1.13e-42 | 153 |
MS.gene031882.t1 | MTR_3g095440 | 31.890 | 254 | 169 | 2 | 18 | 267 | 3 | 256 | 5.79e-42 | 148 |
MS.gene031882.t1 | MTR_1g051120 | 36.098 | 205 | 117 | 2 | 17 | 215 | 13 | 209 | 1.46e-41 | 145 |
MS.gene031882.t1 | MTR_1g051120 | 35.922 | 206 | 118 | 2 | 17 | 216 | 13 | 210 | 2.69e-41 | 147 |
MS.gene031882.t1 | MTR_4g129650 | 31.667 | 240 | 155 | 3 | 119 | 356 | 3 | 235 | 5.03e-41 | 145 |
MS.gene031882.t1 | MTR_6g007753 | 30.841 | 321 | 214 | 3 | 45 | 365 | 324 | 636 | 1.67e-40 | 152 |
MS.gene031882.t1 | MTR_6g007753 | 30.472 | 233 | 157 | 1 | 133 | 365 | 85 | 312 | 2.22e-28 | 117 |
MS.gene031882.t1 | MTR_4g094360 | 27.974 | 311 | 223 | 1 | 9 | 318 | 3 | 313 | 4.65e-40 | 145 |
MS.gene031882.t1 | MTR_6g007750 | 30.887 | 327 | 214 | 5 | 44 | 365 | 36 | 355 | 6.97e-40 | 145 |
MS.gene031882.t1 | MTR_5g089390 | 25.301 | 332 | 239 | 3 | 24 | 355 | 18 | 340 | 2.53e-39 | 144 |
MS.gene031882.t1 | MTR_6g007747 | 31.818 | 308 | 201 | 4 | 45 | 352 | 37 | 335 | 8.17e-39 | 142 |
MS.gene031882.t1 | MTR_6g007740 | 29.619 | 341 | 231 | 5 | 21 | 359 | 13 | 346 | 6.68e-38 | 142 |
MS.gene031882.t1 | MTR_1g068720 | 44.966 | 149 | 78 | 4 | 213 | 358 | 93 | 240 | 2.31e-36 | 133 |
MS.gene031882.t1 | MTR_1g068720 | 36.364 | 88 | 56 | 0 | 9 | 96 | 3 | 90 | 1.46e-13 | 70.5 |
MS.gene031882.t1 | MTR_6g007757 | 31.722 | 331 | 213 | 7 | 45 | 371 | 37 | 358 | 9.91e-36 | 134 |
MS.gene031882.t1 | MTR_6g007760 | 27.541 | 305 | 217 | 3 | 17 | 320 | 8 | 309 | 1.47e-34 | 130 |
MS.gene031882.t1 | MTR_5g012650 | 28.235 | 340 | 236 | 6 | 24 | 359 | 12 | 347 | 8.50e-34 | 129 |
MS.gene031882.t1 | MTR_8g006090 | 33.333 | 237 | 155 | 2 | 21 | 256 | 12 | 246 | 2.60e-32 | 124 |
MS.gene031882.t1 | MTR_5g034980 | 33.628 | 226 | 146 | 3 | 44 | 268 | 31 | 253 | 5.35e-31 | 120 |
MS.gene031882.t1 | MTR_2g102340 | 30.279 | 251 | 171 | 3 | 19 | 268 | 37 | 284 | 6.82e-31 | 120 |
MS.gene031882.t1 | MTR_4g094340 | 32.857 | 210 | 133 | 3 | 10 | 215 | 17 | 222 | 1.24e-30 | 117 |
MS.gene031882.t1 | MTR_4g094342 | 33.981 | 206 | 129 | 3 | 16 | 216 | 9 | 212 | 3.16e-30 | 117 |
MS.gene031882.t1 | MTR_4g100840 | 27.103 | 321 | 229 | 5 | 24 | 340 | 18 | 337 | 1.73e-29 | 117 |
MS.gene031882.t1 | MTR_8g006090 | 36.875 | 160 | 99 | 1 | 97 | 256 | 9 | 166 | 2.21e-25 | 102 |
MS.gene031882.t1 | MTR_8g076800 | 40.152 | 132 | 71 | 3 | 179 | 303 | 133 | 263 | 2.89e-22 | 95.9 |
MS.gene031882.t1 | MTR_6g007757 | 29.956 | 227 | 149 | 5 | 45 | 268 | 37 | 256 | 6.74e-22 | 94.7 |
MS.gene031882.t1 | MTR_6g007470 | 51.220 | 82 | 40 | 0 | 211 | 292 | 104 | 185 | 1.53e-20 | 89.7 |
MS.gene031882.t1 | MTR_4g094348 | 39.516 | 124 | 68 | 2 | 100 | 216 | 2 | 125 | 2.50e-18 | 82.4 |
MS.gene031882.t1 | MTR_1g014790 | 32.520 | 123 | 83 | 0 | 93 | 215 | 36 | 158 | 1.18e-13 | 69.7 |
MS.gene031882.t1 | MTR_3g093450 | 27.000 | 200 | 95 | 7 | 153 | 343 | 25 | 182 | 1.63e-13 | 69.3 |
MS.gene031882.t1 | MTR_1g092700 | 42.623 | 61 | 32 | 1 | 287 | 347 | 4 | 61 | 4.33e-11 | 58.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031882.t1 | AT4G08300 | 63.710 | 372 | 125 | 3 | 12 | 376 | 2 | 370 | 5.11e-169 | 477 |
MS.gene031882.t1 | AT1G44800 | 62.222 | 360 | 131 | 3 | 12 | 369 | 2 | 358 | 4.53e-161 | 457 |
MS.gene031882.t1 | AT1G21890 | 58.290 | 386 | 147 | 4 | 15 | 392 | 5 | 384 | 1.41e-156 | 446 |
MS.gene031882.t1 | AT1G21890 | 62.701 | 311 | 109 | 1 | 15 | 318 | 5 | 315 | 1.21e-139 | 402 |
MS.gene031882.t1 | AT4G08290 | 45.455 | 363 | 198 | 0 | 14 | 376 | 6 | 368 | 8.99e-123 | 360 |
MS.gene031882.t1 | AT2G37460 | 48.108 | 370 | 185 | 5 | 16 | 383 | 10 | 374 | 2.52e-122 | 359 |
MS.gene031882.t1 | AT2G39510 | 51.811 | 359 | 165 | 3 | 16 | 368 | 3 | 359 | 3.81e-122 | 358 |
MS.gene031882.t1 | AT5G07050 | 44.675 | 385 | 195 | 3 | 14 | 392 | 11 | 383 | 1.97e-112 | 335 |
MS.gene031882.t1 | AT5G13670 | 47.112 | 329 | 169 | 4 | 16 | 341 | 3 | 329 | 5.06e-102 | 307 |
MS.gene031882.t1 | AT2G40900 | 43.675 | 332 | 174 | 3 | 20 | 345 | 10 | 334 | 2.71e-100 | 303 |
MS.gene031882.t1 | AT3G56620 | 44.340 | 318 | 171 | 1 | 20 | 337 | 10 | 321 | 2.17e-99 | 300 |
MS.gene031882.t1 | AT2G37450 | 46.667 | 345 | 153 | 6 | 14 | 354 | 2 | 319 | 8.68e-96 | 290 |
MS.gene031882.t1 | AT4G08290 | 46.275 | 255 | 137 | 0 | 14 | 268 | 6 | 260 | 2.28e-84 | 258 |
MS.gene031882.t1 | AT3G18200 | 36.628 | 344 | 214 | 2 | 4 | 347 | 18 | 357 | 1.84e-79 | 249 |
MS.gene031882.t1 | AT1G75500 | 35.789 | 380 | 224 | 9 | 1 | 365 | 1 | 375 | 3.84e-78 | 246 |
MS.gene031882.t1 | AT1G75500 | 35.789 | 380 | 224 | 9 | 1 | 365 | 1 | 375 | 3.84e-78 | 246 |
MS.gene031882.t1 | AT3G53210 | 37.309 | 327 | 202 | 2 | 17 | 342 | 6 | 330 | 2.03e-74 | 236 |
MS.gene031882.t1 | AT2G37450 | 52.941 | 238 | 103 | 4 | 106 | 340 | 1 | 232 | 3.12e-74 | 232 |
MS.gene031882.t1 | AT4G30420 | 34.347 | 329 | 209 | 4 | 16 | 340 | 4 | 329 | 2.60e-66 | 216 |
MS.gene031882.t1 | AT4G30420 | 34.472 | 322 | 204 | 4 | 23 | 340 | 1 | 319 | 1.36e-64 | 211 |
MS.gene031882.t1 | AT5G64700 | 33.239 | 352 | 212 | 3 | 20 | 361 | 7 | 345 | 5.25e-64 | 209 |
MS.gene031882.t1 | AT3G30340 | 35.370 | 311 | 197 | 2 | 45 | 355 | 35 | 341 | 9.85e-64 | 208 |
MS.gene031882.t1 | AT1G09380 | 33.690 | 374 | 233 | 3 | 21 | 389 | 8 | 371 | 5.39e-63 | 206 |
MS.gene031882.t1 | AT1G43650 | 34.311 | 341 | 211 | 3 | 20 | 357 | 6 | 336 | 3.07e-62 | 204 |
MS.gene031882.t1 | AT2G37450 | 45.221 | 272 | 129 | 9 | 78 | 340 | 5 | 265 | 2.04e-61 | 200 |
MS.gene031882.t1 | AT3G53210 | 40.081 | 247 | 145 | 2 | 97 | 342 | 29 | 273 | 2.16e-58 | 192 |
MS.gene031882.t1 | AT4G28040 | 30.812 | 357 | 223 | 6 | 16 | 369 | 3 | 338 | 3.02e-54 | 183 |
MS.gene031882.t1 | AT4G28040 | 30.812 | 357 | 223 | 6 | 16 | 369 | 3 | 338 | 3.02e-54 | 183 |
MS.gene031882.t1 | AT4G28040 | 30.812 | 357 | 223 | 6 | 16 | 369 | 3 | 338 | 3.02e-54 | 183 |
MS.gene031882.t1 | AT4G28040 | 30.812 | 357 | 223 | 6 | 16 | 369 | 3 | 338 | 3.02e-54 | 183 |
MS.gene031882.t1 | AT4G28040 | 30.812 | 357 | 223 | 6 | 16 | 369 | 3 | 338 | 3.02e-54 | 183 |
MS.gene031882.t1 | AT3G53210 | 35.798 | 257 | 162 | 2 | 17 | 272 | 6 | 260 | 4.24e-54 | 180 |
MS.gene031882.t1 | AT1G25270 | 31.781 | 365 | 224 | 4 | 19 | 369 | 1 | 354 | 6.78e-54 | 182 |
MS.gene031882.t1 | AT3G18200 | 39.301 | 229 | 135 | 2 | 119 | 347 | 3 | 227 | 1.38e-53 | 178 |
MS.gene031882.t1 | AT1G01070 | 33.636 | 330 | 202 | 7 | 46 | 365 | 41 | 363 | 2.66e-51 | 176 |
MS.gene031882.t1 | AT5G40240 | 29.859 | 355 | 239 | 5 | 17 | 367 | 16 | 364 | 4.79e-51 | 175 |
MS.gene031882.t1 | AT5G40240 | 29.859 | 355 | 239 | 5 | 17 | 367 | 16 | 364 | 4.79e-51 | 175 |
MS.gene031882.t1 | AT5G40240 | 29.859 | 355 | 239 | 5 | 17 | 367 | 30 | 378 | 4.89e-51 | 176 |
MS.gene031882.t1 | AT4G01440 | 29.373 | 303 | 210 | 2 | 46 | 347 | 35 | 334 | 6.25e-51 | 175 |
MS.gene031882.t1 | AT1G68170 | 30.484 | 351 | 235 | 2 | 17 | 358 | 9 | 359 | 1.24e-48 | 169 |
MS.gene031882.t1 | AT1G68170 | 30.372 | 349 | 234 | 2 | 19 | 358 | 1 | 349 | 1.12e-47 | 166 |
MS.gene031882.t1 | AT4G01430 | 29.552 | 335 | 230 | 4 | 46 | 378 | 34 | 364 | 1.67e-47 | 166 |
MS.gene031882.t1 | AT5G40230 | 28.736 | 348 | 232 | 6 | 17 | 357 | 17 | 355 | 1.17e-46 | 164 |
MS.gene031882.t1 | AT5G45370 | 30.793 | 328 | 209 | 4 | 34 | 346 | 33 | 357 | 4.20e-45 | 160 |
MS.gene031882.t1 | AT5G45370 | 30.793 | 328 | 209 | 4 | 34 | 346 | 33 | 357 | 4.20e-45 | 160 |
MS.gene031882.t1 | AT5G45370 | 30.990 | 313 | 204 | 3 | 34 | 346 | 33 | 333 | 1.58e-44 | 158 |
MS.gene031882.t1 | AT3G28050 | 30.904 | 343 | 226 | 6 | 17 | 355 | 8 | 343 | 1.80e-44 | 158 |
MS.gene031882.t1 | AT4G01440 | 29.433 | 282 | 179 | 3 | 46 | 318 | 35 | 305 | 3.81e-44 | 155 |
MS.gene031882.t1 | AT1G01070 | 33.010 | 309 | 190 | 7 | 67 | 365 | 15 | 316 | 3.13e-43 | 153 |
MS.gene031882.t1 | AT1G11450 | 30.380 | 316 | 209 | 4 | 46 | 356 | 41 | 350 | 1.50e-42 | 152 |
MS.gene031882.t1 | AT5G40210 | 28.902 | 346 | 220 | 7 | 24 | 365 | 16 | 339 | 1.50e-41 | 149 |
MS.gene031882.t1 | AT3G45870 | 30.462 | 325 | 216 | 2 | 20 | 335 | 11 | 334 | 1.56e-41 | 150 |
MS.gene031882.t1 | AT1G70260 | 27.300 | 337 | 235 | 3 | 18 | 346 | 9 | 343 | 2.20e-41 | 150 |
MS.gene031882.t1 | AT1G11450 | 30.225 | 311 | 206 | 4 | 51 | 356 | 2 | 306 | 7.16e-41 | 147 |
MS.gene031882.t1 | AT1G11460 | 30.897 | 301 | 195 | 5 | 46 | 340 | 41 | 334 | 8.10e-41 | 147 |
MS.gene031882.t1 | AT3G28070 | 30.000 | 260 | 178 | 3 | 104 | 361 | 8 | 265 | 1.11e-39 | 142 |
MS.gene031882.t1 | AT3G28100 | 29.412 | 289 | 198 | 4 | 72 | 359 | 66 | 349 | 1.35e-39 | 144 |
MS.gene031882.t1 | AT4G19185 | 28.796 | 382 | 250 | 5 | 22 | 386 | 22 | 398 | 1.53e-39 | 145 |
MS.gene031882.t1 | AT3G30340 | 34.375 | 224 | 146 | 1 | 45 | 268 | 35 | 257 | 2.02e-39 | 142 |
MS.gene031882.t1 | AT1G11450 | 30.033 | 303 | 201 | 4 | 59 | 356 | 3 | 299 | 6.31e-39 | 141 |
MS.gene031882.t1 | AT3G28070 | 30.249 | 281 | 191 | 4 | 83 | 361 | 80 | 357 | 6.34e-39 | 143 |
MS.gene031882.t1 | AT3G28080 | 28.328 | 293 | 196 | 5 | 72 | 359 | 66 | 349 | 7.48e-39 | 142 |
MS.gene031882.t1 | AT4G15540 | 28.280 | 343 | 230 | 4 | 17 | 358 | 13 | 340 | 1.05e-38 | 142 |
MS.gene031882.t1 | AT4G15540 | 28.280 | 343 | 230 | 4 | 17 | 358 | 13 | 340 | 1.05e-38 | 142 |
MS.gene031882.t1 | AT3G28080 | 29.183 | 257 | 177 | 3 | 104 | 359 | 8 | 260 | 1.17e-38 | 140 |
MS.gene031882.t1 | AT3G28080 | 29.183 | 257 | 177 | 3 | 104 | 359 | 8 | 260 | 1.17e-38 | 140 |
MS.gene031882.t1 | AT3G28080 | 29.183 | 257 | 177 | 3 | 104 | 359 | 8 | 260 | 1.17e-38 | 140 |
MS.gene031882.t1 | AT3G28080 | 29.183 | 257 | 177 | 3 | 104 | 359 | 8 | 260 | 1.17e-38 | 140 |
MS.gene031882.t1 | AT3G28130 | 32.917 | 240 | 159 | 2 | 104 | 342 | 10 | 248 | 1.24e-38 | 140 |
MS.gene031882.t1 | AT3G28130 | 32.917 | 240 | 159 | 2 | 104 | 342 | 10 | 248 | 1.24e-38 | 140 |
MS.gene031882.t1 | AT5G64700 | 31.395 | 258 | 162 | 2 | 20 | 267 | 7 | 259 | 1.25e-38 | 139 |
MS.gene031882.t1 | AT5G47470 | 29.940 | 334 | 212 | 7 | 28 | 354 | 65 | 383 | 2.20e-38 | 142 |
MS.gene031882.t1 | AT5G47470 | 29.940 | 334 | 212 | 7 | 28 | 354 | 37 | 355 | 2.48e-38 | 141 |
MS.gene031882.t1 | AT5G47470 | 30.120 | 332 | 210 | 7 | 28 | 352 | 65 | 381 | 5.45e-38 | 141 |
MS.gene031882.t1 | AT4G01430 | 30.249 | 281 | 194 | 2 | 46 | 324 | 34 | 314 | 6.67e-38 | 139 |
MS.gene031882.t1 | AT3G28080 | 29.183 | 257 | 177 | 3 | 104 | 359 | 89 | 341 | 1.06e-37 | 139 |
MS.gene031882.t1 | AT1G43650 | 34.661 | 251 | 153 | 2 | 20 | 267 | 6 | 248 | 1.42e-37 | 137 |
MS.gene031882.t1 | AT3G28130 | 32.645 | 242 | 161 | 2 | 104 | 344 | 96 | 336 | 1.69e-37 | 139 |
MS.gene031882.t1 | AT4G24980 | 31.596 | 307 | 142 | 5 | 35 | 341 | 1 | 239 | 6.87e-37 | 135 |
MS.gene031882.t1 | AT4G01440 | 29.075 | 227 | 157 | 2 | 122 | 347 | 3 | 226 | 6.63e-35 | 129 |
MS.gene031882.t1 | AT4G01440 | 29.075 | 227 | 157 | 2 | 122 | 347 | 3 | 226 | 6.63e-35 | 129 |
MS.gene031882.t1 | AT3G45870 | 29.221 | 308 | 208 | 2 | 20 | 318 | 11 | 317 | 7.37e-35 | 131 |
MS.gene031882.t1 | AT4G01440 | 29.741 | 232 | 143 | 4 | 46 | 268 | 35 | 255 | 5.67e-34 | 127 |
MS.gene031882.t1 | AT4G19185 | 29.085 | 306 | 195 | 5 | 98 | 386 | 20 | 320 | 2.35e-33 | 127 |
MS.gene031882.t1 | AT5G45370 | 31.008 | 258 | 160 | 4 | 104 | 346 | 1 | 255 | 4.30e-32 | 122 |
MS.gene031882.t1 | AT5G45370 | 31.008 | 258 | 160 | 4 | 104 | 346 | 1 | 255 | 4.30e-32 | 122 |
MS.gene031882.t1 | AT1G11450 | 29.964 | 277 | 184 | 3 | 46 | 318 | 41 | 311 | 6.15e-32 | 123 |
MS.gene031882.t1 | AT1G11450 | 29.658 | 263 | 174 | 4 | 99 | 356 | 2 | 258 | 1.04e-31 | 121 |
MS.gene031882.t1 | AT1G60050 | 24.148 | 352 | 251 | 5 | 17 | 357 | 9 | 355 | 5.67e-31 | 122 |
MS.gene031882.t1 | AT4G01450 | 28.763 | 299 | 205 | 2 | 46 | 343 | 35 | 326 | 1.17e-30 | 120 |
MS.gene031882.t1 | AT3G28070 | 29.787 | 235 | 160 | 4 | 86 | 318 | 83 | 314 | 2.42e-29 | 116 |
MS.gene031882.t1 | AT4G01450 | 27.372 | 274 | 191 | 2 | 46 | 318 | 35 | 301 | 5.13e-29 | 115 |
MS.gene031882.t1 | AT3G28070 | 27.391 | 230 | 163 | 3 | 134 | 361 | 1 | 228 | 1.31e-28 | 112 |
MS.gene031882.t1 | AT3G45870 | 29.278 | 263 | 174 | 3 | 20 | 273 | 11 | 270 | 1.99e-28 | 112 |
MS.gene031882.t1 | AT3G28080 | 26.872 | 227 | 161 | 3 | 134 | 359 | 1 | 223 | 4.71e-28 | 110 |
MS.gene031882.t1 | AT4G16620 | 26.126 | 333 | 237 | 4 | 29 | 357 | 20 | 347 | 4.72e-28 | 113 |
MS.gene031882.t1 | AT3G28130 | 30.476 | 210 | 144 | 2 | 134 | 342 | 1 | 209 | 1.09e-27 | 109 |
MS.gene031882.t1 | AT4G01450 | 27.830 | 212 | 145 | 2 | 46 | 256 | 35 | 239 | 1.24e-25 | 104 |
MS.gene031882.t1 | AT5G45370 | 28.328 | 293 | 183 | 7 | 72 | 346 | 14 | 297 | 2.15e-25 | 105 |
MS.gene031882.t1 | AT3G28080 | 25.000 | 292 | 153 | 6 | 72 | 359 | 66 | 295 | 2.21e-24 | 102 |
MS.gene031882.t1 | AT3G45870 | 31.604 | 212 | 135 | 2 | 133 | 335 | 49 | 259 | 3.27e-24 | 102 |
MS.gene031882.t1 | AT3G28080 | 25.391 | 256 | 134 | 4 | 104 | 359 | 8 | 206 | 4.14e-24 | 99.4 |
MS.gene031882.t1 | AT3G28100 | 31.633 | 196 | 132 | 2 | 72 | 266 | 66 | 260 | 1.94e-22 | 96.3 |
MS.gene031882.t1 | AT4G01430 | 25.108 | 231 | 168 | 3 | 149 | 378 | 1 | 227 | 2.93e-22 | 94.7 |
MS.gene031882.t1 | AT4G01450 | 27.225 | 191 | 133 | 1 | 46 | 236 | 35 | 219 | 4.67e-22 | 94.7 |
MS.gene031882.t1 | AT4G16620 | 27.059 | 255 | 178 | 3 | 106 | 357 | 1 | 250 | 1.72e-20 | 90.5 |
MS.gene031882.t1 | AT4G16620 | 27.059 | 255 | 178 | 3 | 106 | 357 | 1 | 250 | 1.72e-20 | 90.5 |
MS.gene031882.t1 | AT3G28130 | 32.143 | 168 | 112 | 2 | 104 | 270 | 96 | 262 | 2.41e-19 | 87.4 |
MS.gene031882.t1 | AT3G45870 | 33.803 | 142 | 93 | 1 | 194 | 335 | 43 | 183 | 2.72e-18 | 84.0 |
MS.gene031882.t1 | AT3G45870 | 29.744 | 195 | 127 | 2 | 133 | 318 | 49 | 242 | 9.89e-18 | 82.4 |
MS.gene031882.t1 | AT3G45870 | 29.744 | 195 | 127 | 2 | 133 | 318 | 49 | 242 | 9.89e-18 | 82.4 |
MS.gene031882.t1 | AT4G16620 | 25.837 | 209 | 150 | 2 | 29 | 236 | 20 | 224 | 5.01e-17 | 80.9 |
MS.gene031882.t1 | AT3G28100 | 32.716 | 162 | 108 | 1 | 74 | 235 | 68 | 228 | 8.33e-17 | 80.1 |
MS.gene031882.t1 | AT3G28130 | 46.875 | 64 | 34 | 0 | 104 | 167 | 96 | 159 | 1.25e-12 | 67.0 |
MS.gene031882.t1 | AT3G45870 | 29.730 | 148 | 92 | 3 | 135 | 273 | 4 | 148 | 2.07e-11 | 62.4 |
MS.gene031882.t1 | AT3G45870 | 30.000 | 150 | 93 | 3 | 133 | 273 | 49 | 195 | 2.92e-11 | 62.8 |
Find 100 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAACGGTTGTAACCGTTTC+TGG | 0.099220 | 3.4:-71345203 | MS.gene031882:CDS |
ACCAACCATCCGACCAAAAT+TGG | 0.126615 | 3.4:-71345091 | MS.gene031882:CDS |
TTATAATGGCTCTCACTTTC+AGG | 0.165762 | 3.4:-71345710 | MS.gene031882:intron |
TCAACTTACCATTAGCATTT+TGG | 0.208587 | 3.4:+71347632 | None:intergenic |
CACAGCGTAGCCAAAGTAAT+TGG | 0.236548 | 3.4:-71345224 | MS.gene031882:CDS |
GCTATATTGTCCCTTCAATT+TGG | 0.246893 | 3.4:-71347571 | MS.gene031882:CDS |
GGAGCTATTATCATCGTTAT+TGG | 0.253163 | 3.4:-71344113 | MS.gene031882:CDS |
TTGTGCCCATCACCCAATTT+TGG | 0.297815 | 3.4:+71345078 | None:intergenic |
CCCTGCCTATCAGATTATAA+AGG | 0.359273 | 3.4:-71345153 | MS.gene031882:CDS |
ATCAAGAATGGTACAAAATC+AGG | 0.362733 | 3.4:-71344002 | MS.gene031882:CDS |
TGGTTGGTCGGTTGCGGCGG+AGG | 0.363419 | 3.4:+71345106 | None:intergenic |
GGCGGAGGCGTGGTGGTTGA+TGG | 0.372027 | 3.4:+71345121 | None:intergenic |
TTGGTCTTTACACTGTGGTA+TGG | 0.380721 | 3.4:-71344094 | MS.gene031882:CDS |
TGGTCTTTACACTGTGGTAT+GGG | 0.382522 | 3.4:-71344093 | MS.gene031882:CDS |
TCTTGATTGGCAATTGATCC+TGG | 0.385333 | 3.4:+71344018 | None:intergenic |
AACAGCATGGATTTGCTTGA+TGG | 0.386644 | 3.4:-71344627 | MS.gene031882:CDS |
GTCCCTTCAATTTGGTTACT+CGG | 0.389202 | 3.4:-71347563 | MS.gene031882:CDS |
TGCTTGATGGGTATTATTGA+GGG | 0.399691 | 3.4:-71344614 | MS.gene031882:CDS |
TATATCAAGTTGTTGTAGTT+GGG | 0.408362 | 3.4:-71345048 | MS.gene031882:CDS |
GGGGATGTACATCATTACTA+TGG | 0.409950 | 3.4:-71347542 | MS.gene031882:CDS |
GTCGGATGGTTGGTCGGTTG+CGG | 0.410621 | 3.4:+71345100 | None:intergenic |
CCCTTTATAATCTGATAGGC+AGG | 0.412069 | 3.4:+71345152 | None:intergenic |
TTGCTTGATGGGTATTATTG+AGG | 0.412527 | 3.4:-71344615 | MS.gene031882:CDS |
TTATATCAAGTTGTTGTAGT+TGG | 0.418246 | 3.4:-71345049 | MS.gene031882:CDS |
TCCCTTCAATTTGGTTACTC+GGG | 0.419264 | 3.4:-71347562 | MS.gene031882:CDS |
TACAACCGTTCCAATTACTT+TGG | 0.433847 | 3.4:+71345214 | None:intergenic |
CTTCATCATCATGCTTATGT+TGG | 0.457098 | 3.4:+71343906 | None:intergenic |
ATGGAGGACCAAAATGCTAA+TGG | 0.457402 | 3.4:-71347640 | MS.gene031882:CDS |
CCAACCATCCGACCAAAATT+GGG | 0.458005 | 3.4:-71345090 | MS.gene031882:CDS |
CCCCATCTTCCTGAGGATAG+TGG | 0.460250 | 3.4:-71347130 | MS.gene031882:CDS |
TCCTCCCTTTATAATCTGAT+AGG | 0.461593 | 3.4:+71345148 | None:intergenic |
TTAGCTGAACAAGTTCATCT+TGG | 0.461729 | 3.4:-71344267 | MS.gene031882:CDS |
CGTGAAGACACATCAGAGAT+AGG | 0.464860 | 3.4:-71344053 | MS.gene031882:CDS |
TCAAGTTGTTGTAGTTGGGC+TGG | 0.467278 | 3.4:-71345044 | MS.gene031882:CDS |
GCCACTATCCTCAGGAAGAT+GGG | 0.467307 | 3.4:+71347129 | None:intergenic |
TCAAACATGGTATGAGCCAT+TGG | 0.469056 | 3.4:-71347513 | MS.gene031882:CDS |
GCCATTATAAAAGTAATAGC+TGG | 0.469113 | 3.4:+71345723 | None:intergenic |
GATAGGAAAAGGTGAAGGCC+AGG | 0.472166 | 3.4:-71344036 | MS.gene031882:CDS |
TGCCACTATCCTCAGGAAGA+TGG | 0.473679 | 3.4:+71347128 | None:intergenic |
GCTGTTAGTGATAGCTCTGC+TGG | 0.478245 | 3.4:+71344644 | None:intergenic |
CCTGCCTATCAGATTATAAA+GGG | 0.479362 | 3.4:-71345152 | MS.gene031882:CDS |
AAGATGGGGAGAGTCATCTT+TGG | 0.484154 | 3.4:+71347144 | None:intergenic |
GGGTCATAGGTTGGGACTCA+AGG | 0.484228 | 3.4:-71344550 | MS.gene031882:CDS |
ATGATTATCACTGCTGCATT+GGG | 0.487028 | 3.4:-71344300 | MS.gene031882:CDS |
TCAGGTTAGAGTCAGTGAAC+TGG | 0.496846 | 3.4:-71345256 | MS.gene031882:intron |
AACCAGGGTGTGATATGCTC+TGG | 0.500988 | 3.4:-71344399 | MS.gene031882:intron |
TGTAACCGTTTCTGGAGCTA+TGG | 0.502540 | 3.4:-71345195 | MS.gene031882:CDS |
GGTCGGTTGCGGCGGAGGCG+TGG | 0.507173 | 3.4:+71345111 | None:intergenic |
GACACATCAGAGATAGGAAA+AGG | 0.507769 | 3.4:-71344047 | MS.gene031882:CDS |
TTCCTGAGGATAGTGGCACT+TGG | 0.515982 | 3.4:-71347123 | MS.gene031882:CDS |
CTGAACAAGTTCATCTTGGA+AGG | 0.517537 | 3.4:-71344263 | MS.gene031882:intron |
GATCAATTGCCAATCAAGAA+TGG | 0.518861 | 3.4:-71344014 | MS.gene031882:CDS |
CTTTCGCGCTTGTGCTCGAA+AGG | 0.520412 | 3.4:-71347444 | MS.gene031882:intron |
TCCCCGAGTAACCAAATTGA+AGG | 0.524768 | 3.4:+71347560 | None:intergenic |
GGATGGTTGGTCGGTTGCGG+CGG | 0.533490 | 3.4:+71345103 | None:intergenic |
TATGATTATCACTGCTGCAT+TGG | 0.533858 | 3.4:-71344301 | MS.gene031882:CDS |
GACATGAGTGTGTGGGTCAT+AGG | 0.533991 | 3.4:-71344563 | MS.gene031882:CDS |
ATCCGACCAAAATTGGGTGA+TGG | 0.535831 | 3.4:-71345084 | MS.gene031882:CDS |
TCCGACCAAAATTGGGTGAT+GGG | 0.536429 | 3.4:-71345083 | MS.gene031882:CDS |
CTTTCGAGCACAAGCGCGAA+AGG | 0.544006 | 3.4:+71347445 | None:intergenic |
GGAATGGCATATTATGTACA+AGG | 0.549854 | 3.4:-71344378 | MS.gene031882:CDS |
GAGTGTGTGGGTCATAGGTT+GGG | 0.550997 | 3.4:-71344558 | MS.gene031882:CDS |
AGGGACAATATAGCAAGGTA+TGG | 0.553205 | 3.4:+71347580 | None:intergenic |
AACCAAGTGCCACTATCCTC+AGG | 0.556943 | 3.4:+71347121 | None:intergenic |
CATAACCATAGCTCCAGAAA+CGG | 0.559343 | 3.4:+71345190 | None:intergenic |
CGGTTGCGGCGGAGGCGTGG+TGG | 0.561709 | 3.4:+71345114 | None:intergenic |
CCCTTCAATTTGGTTACTCG+GGG | 0.562657 | 3.4:-71347561 | MS.gene031882:CDS |
TGAGTGTGTGGGTCATAGGT+TGG | 0.566678 | 3.4:-71344559 | MS.gene031882:CDS |
ACAGCATGGATTTGCTTGAT+GGG | 0.567939 | 3.4:-71344626 | MS.gene031882:CDS |
CTCCGTGTACCGTCATGTTG+TGG | 0.575393 | 3.4:-71347485 | MS.gene031882:CDS |
AGATCAAAACTTGTACAACA+TGG | 0.579557 | 3.4:-71345796 | MS.gene031882:CDS |
GCTAATGGTAAGTTGAACAA+TGG | 0.587597 | 3.4:-71347625 | MS.gene031882:CDS |
GGTCTTTACACTGTGGTATG+GGG | 0.595316 | 3.4:-71344092 | MS.gene031882:CDS |
ACTATGGTTTCTTTCAAACA+TGG | 0.599226 | 3.4:-71347526 | MS.gene031882:CDS |
GCAGTGATAATCATACATAG+TGG | 0.600906 | 3.4:+71344309 | None:intergenic |
CAGAGCTATCACTAACAGCA+TGG | 0.605816 | 3.4:-71344640 | MS.gene031882:CDS |
GGCCACAACATGACGGTACA+CGG | 0.607059 | 3.4:+71347483 | None:intergenic |
TATCAGATTATAAAGGGAGG+AGG | 0.609311 | 3.4:-71345146 | MS.gene031882:CDS |
GATCAAAACTTGTACAACAT+GGG | 0.613658 | 3.4:-71345795 | MS.gene031882:CDS |
CCTTTATAATCTGATAGGCA+GGG | 0.618911 | 3.4:+71345153 | None:intergenic |
CGTTATTGGTCTTTACACTG+TGG | 0.630311 | 3.4:-71344099 | MS.gene031882:CDS |
TTATAAAAGTAATAGCTGGA+AGG | 0.634915 | 3.4:+71345727 | None:intergenic |
CCACTATCCTCAGGAAGATG+GGG | 0.640156 | 3.4:+71347130 | None:intergenic |
GAAAGGAGTAATTATAATTG+CGG | 0.640420 | 3.4:+71347462 | None:intergenic |
GGGTGTGATATGCTCTGGAA+TGG | 0.640880 | 3.4:-71344394 | MS.gene031882:CDS |
GCCTATCAGATTATAAAGGG+AGG | 0.643212 | 3.4:-71345149 | MS.gene031882:CDS |
CCCCGAGTAACCAAATTGAA+GGG | 0.651140 | 3.4:+71347561 | None:intergenic |
TTGAAAGAGACATGAGTGTG+TGG | 0.655962 | 3.4:-71344571 | MS.gene031882:CDS |
ATTGAAGGGACAATATAGCA+AGG | 0.656111 | 3.4:+71347575 | None:intergenic |
GAATGGCATATTATGTACAA+GGG | 0.658299 | 3.4:-71344377 | MS.gene031882:CDS |
ATGGTTATGACTTTGTACAA+AGG | 0.661239 | 3.4:-71345176 | MS.gene031882:CDS |
TAATTGCGGCCACAACATGA+CGG | 0.665558 | 3.4:+71347476 | None:intergenic |
TCAGAGATAGGAAAAGGTGA+AGG | 0.669132 | 3.4:-71344041 | MS.gene031882:CDS |
TGACTCTCCCCATCTTCCTG+AGG | 0.673443 | 3.4:-71347137 | MS.gene031882:CDS |
CGTAGCCAAAGTAATTGGAA+CGG | 0.674504 | 3.4:-71345219 | MS.gene031882:CDS |
AATGGCATATTATGTACAAG+GGG | 0.679044 | 3.4:-71344376 | MS.gene031882:CDS |
TGAAAGAGACATGAGTGTGT+GGG | 0.686987 | 3.4:-71344570 | MS.gene031882:CDS |
AGCTGGAAGGACATTAACAG+TGG | 0.704261 | 3.4:+71345740 | None:intergenic |
GGGGTTGTAACTAGAGAACG+TGG | 0.715948 | 3.4:-71344357 | MS.gene031882:CDS |
GGTACACGGAGAGAATCCAA+TGG | 0.752925 | 3.4:+71347497 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CTCTAATTTAATTAAAATAT+TGG | - | chr3.4:71347377-71347396 | MS.gene031882:intron | 10.0% |
!! | TATTATAAAAAAAGATTCAT+TGG | + | chr3.4:71346227-71346246 | None:intergenic | 10.0% |
!! | TTTACTATTTATTTAGTAAA+AGG | - | chr3.4:71345565-71345584 | MS.gene031882:intron | 10.0% |
!!! | AGATCAAATTTTAATTTTTT+TGG | + | chr3.4:71346637-71346656 | None:intergenic | 10.0% |
!!! | TATTATTTTACTAATTAATC+AGG | - | chr3.4:71346286-71346305 | MS.gene031882:intron | 10.0% |
!!! | TTTTCATTTTATAGTATATT+TGG | - | chr3.4:71347426-71347445 | MS.gene031882:intron | 10.0% |
!! | ATAAAAGATTAGAAAATTAG+AGG | + | chr3.4:71346172-71346191 | None:intergenic | 15.0% |
!! | ATAAAATTCATAATCTTTCT+TGG | - | chr3.4:71344668-71344687 | MS.gene031882:CDS | 15.0% |
!! | TTCACTAAGTAAATAAATAA+AGG | + | chr3.4:71347066-71347085 | None:intergenic | 15.0% |
!! | TTTATATTTACAGAAAAACA+AGG | - | chr3.4:71344393-71344412 | MS.gene031882:CDS | 15.0% |
!!! | AAGAAAGATTATGAATTTTA+TGG | + | chr3.4:71344669-71344688 | None:intergenic | 15.0% |
!!! | ATAGTTTAAACATTTTTCTA+TGG | - | chr3.4:71345623-71345642 | MS.gene031882:intron | 15.0% |
!!! | CATTCTAAAAAAACATTTTT+CGG | - | chr3.4:71344873-71344892 | MS.gene031882:intron | 15.0% |
!! | AAAATTGTTCCTATAATTCA+TGG | + | chr3.4:71345547-71345566 | None:intergenic | 20.0% |
!! | AAATTGTTCCTATAATTCAT+GGG | + | chr3.4:71345546-71345565 | None:intergenic | 20.0% |
!! | ATATATGAATTGAAGTGATT+AGG | + | chr3.4:71345402-71345421 | None:intergenic | 20.0% |
!! | TTATTGATAGAGATTAGAAA+CGG | - | chr3.4:71344193-71344212 | MS.gene031882:intron | 20.0% |
!! | TTCTAATAAATCTAATGACA+TGG | - | chr3.4:71346251-71346270 | MS.gene031882:intron | 20.0% |
!! | TTGTGATAATTATATAACCA+GGG | - | chr3.4:71347146-71347165 | MS.gene031882:CDS | 20.0% |
!! | TTTGTGATAATTATATAACC+AGG | - | chr3.4:71347145-71347164 | MS.gene031882:CDS | 20.0% |
!!! | AGTTTTTGTTTTTGTTTTCA+TGG | + | chr3.4:71345896-71345915 | None:intergenic | 20.0% |
!!! | AGTTTTTTGTACCAAAAAAA+AGG | + | chr3.4:71344932-71344951 | None:intergenic | 20.0% |
!!! | ATTCATTTCTATTTGCTTTT+AGG | + | chr3.4:71344973-71344992 | None:intergenic | 20.0% |
!!! | GATGTGATAATATAATTTTC+TGG | - | chr3.4:71345474-71345493 | MS.gene031882:intron | 20.0% |
!!! | GGATAATATATAGTTTTATG+AGG | - | chr3.4:71345122-71345141 | MS.gene031882:CDS | 20.0% |
!!! | GTTACATATTTTAAGAGAAA+GGG | + | chr3.4:71347328-71347347 | None:intergenic | 20.0% |
!!! | TAATATATAAATTGACTCGA+TGG | + | chr3.4:71345435-71345454 | None:intergenic | 20.0% |
!!! | TGTTACATATTTTAAGAGAA+AGG | + | chr3.4:71347329-71347348 | None:intergenic | 20.0% |
!!! | TGTTTCTTGTTTTTTTTTTC+CGG | - | chr3.4:71345654-71345673 | MS.gene031882:intron | 20.0% |
!!! | TTTTTTTAAAACCTTTTGCT+TGG | - | chr3.4:71344770-71344789 | MS.gene031882:intron | 20.0% |
!!! | TTTTTTTTGGTACAAAAAAC+TGG | - | chr3.4:71344931-71344950 | MS.gene031882:intron | 20.0% |
! | AAGAAATGAAATCACACAAT+GGG | + | chr3.4:71345101-71345120 | None:intergenic | 25.0% |
! | AATAGCACGAATTAAGATAA+GGG | + | chr3.4:71345333-71345352 | None:intergenic | 25.0% |
! | AATTCATAATCTTTCTTGGT+TGG | - | chr3.4:71344672-71344691 | MS.gene031882:intron | 25.0% |
! | AATTGTTCCTATAATTCATG+GGG | + | chr3.4:71345545-71345564 | None:intergenic | 25.0% |
! | AGAATATATGTCTTGATGTT+TGG | + | chr3.4:71346573-71346592 | None:intergenic | 25.0% |
! | AGGAAATCAAAAAGATTCAT+AGG | - | chr3.4:71344699-71344718 | MS.gene031882:intron | 25.0% |
! | AGTAAAAGGAACAAGTTATA+AGG | - | chr3.4:71345579-71345598 | MS.gene031882:intron | 25.0% |
! | ATTCATAATCTTTCTTGGTT+GGG | - | chr3.4:71344673-71344692 | MS.gene031882:intron | 25.0% |
! | ATTGTGTGATTTCATTTCTT+AGG | - | chr3.4:71345101-71345120 | MS.gene031882:CDS | 25.0% |
! | GAAAGGAGTAATTATAATTG+CGG | + | chr3.4:71344101-71344120 | None:intergenic | 25.0% |
! | TAAGAAATGAAATCACACAA+TGG | + | chr3.4:71345102-71345121 | None:intergenic | 25.0% |
! | TTAGCGAGAAAAATAAATTG+TGG | - | chr3.4:71345364-71345383 | MS.gene031882:intron | 25.0% |
! | TTATAAAAGTAATAGCTGGA+AGG | + | chr3.4:71345836-71345855 | None:intergenic | 25.0% |
! | TTTGTACCAAAAAAAAGGTA+AGG | + | chr3.4:71344927-71344946 | None:intergenic | 25.0% |
!! | GAGAATTAGTTTCTCTATAA+TGG | - | chr3.4:71346708-71346727 | MS.gene031882:intron | 25.0% |
!! | TATATCAAGTTGTTGTAGTT+GGG | - | chr3.4:71346512-71346531 | MS.gene031882:intron | 25.0% |
!! | TGCTTATCTTAATTCAAGTT+TGG | + | chr3.4:71346112-71346131 | None:intergenic | 25.0% |
!! | TGTTGTTGATAAAATGAAAC+AGG | - | chr3.4:71345733-71345752 | MS.gene031882:CDS | 25.0% |
!! | TTAAACATTTTTCTATGGCT+AGG | - | chr3.4:71345628-71345647 | MS.gene031882:intron | 25.0% |
!! | TTATATCAAGTTGTTGTAGT+TGG | - | chr3.4:71346511-71346530 | MS.gene031882:intron | 25.0% |
!!! | AGATCCATTTTTCAAAGAAA+TGG | - | chr3.4:71346765-71346784 | MS.gene031882:intron | 25.0% |
!!! | ATATAGTTTTATGAGGCATT+GGG | - | chr3.4:71345129-71345148 | MS.gene031882:CDS | 25.0% |
!!! | GATCCATTTTTCAAAGAAAT+GGG | - | chr3.4:71346766-71346785 | MS.gene031882:intron | 25.0% |
!!! | TATATAGTTTTATGAGGCAT+TGG | - | chr3.4:71345128-71345147 | MS.gene031882:CDS | 25.0% |
!!! | TCCAGCTATTACTTTTATAA+TGG | - | chr3.4:71345836-71345855 | MS.gene031882:intron | 25.0% |
AAACCTTGTTAAGCTTATGA+AGG | + | chr3.4:71344362-71344381 | None:intergenic | 30.0% | |
AATGGCATATTATGTACAAG+GGG | - | chr3.4:71347184-71347203 | MS.gene031882:intron | 30.0% | |
AATTCTCACACCATATCTAA+TGG | + | chr3.4:71346695-71346714 | None:intergenic | 30.0% | |
ACTATGGTTTCTTTCAAACA+TGG | - | chr3.4:71344034-71344053 | MS.gene031882:CDS | 30.0% | |
AGAAATGAAATCACACAATG+GGG | + | chr3.4:71345100-71345119 | None:intergenic | 30.0% | |
AGATCAAAACTTGTACAACA+TGG | - | chr3.4:71345764-71345783 | MS.gene031882:CDS | 30.0% | |
ATATGTCTTGATGTTTGGTT+TGG | + | chr3.4:71346568-71346587 | None:intergenic | 30.0% | |
ATCAAGAATGGTACAAAATC+AGG | - | chr3.4:71347558-71347577 | MS.gene031882:CDS | 30.0% | |
ATGGTTATGACTTTGTACAA+AGG | - | chr3.4:71346384-71346403 | MS.gene031882:intron | 30.0% | |
ATTGTGTAACTTGAAGAGTT+TGG | + | chr3.4:71345218-71345237 | None:intergenic | 30.0% | |
CAATAGCACGAATTAAGATA+AGG | + | chr3.4:71345334-71345353 | None:intergenic | 30.0% | |
CCAGCTGAAAAATTGAAAAA+AGG | - | chr3.4:71347615-71347634 | MS.gene031882:CDS | 30.0% | |
CTTATCTTAATTCGTGCTAT+TGG | - | chr3.4:71345332-71345351 | MS.gene031882:intron | 30.0% | |
CTTGACAACAAAATTTGAGA+CGG | - | chr3.4:71344262-71344281 | MS.gene031882:intron | 30.0% | |
GAATGGCATATTATGTACAA+GGG | - | chr3.4:71347183-71347202 | MS.gene031882:intron | 30.0% | |
GATCAAAACTTGTACAACAT+GGG | - | chr3.4:71345765-71345784 | MS.gene031882:CDS | 30.0% | |
GCCATTATAAAAGTAATAGC+TGG | + | chr3.4:71345840-71345859 | None:intergenic | 30.0% | |
GTGTTCCTGGAAAAAATAAT+TGG | - | chr3.4:71345956-71345975 | MS.gene031882:intron | 30.0% | |
GTTGAAAGAGACATAAAAAG+AGG | + | chr3.4:71344164-71344183 | None:intergenic | 30.0% | |
TATCTTCATGATCATGAGTT+AGG | - | chr3.4:71344546-71344565 | MS.gene031882:CDS | 30.0% | |
! | GATTTTGTACCATTCTTGAT+TGG | + | chr3.4:71347558-71347577 | None:intergenic | 30.0% |
! | TCAACTTACCATTAGCATTT+TGG | + | chr3.4:71343931-71343950 | None:intergenic | 30.0% |
! | TGACCCATTTCTTTGAAAAA+TGG | + | chr3.4:71346772-71346791 | None:intergenic | 30.0% |
! | TTTCGTCCTTATGATTTTTG+TGG | + | chr3.4:71345073-71345092 | None:intergenic | 30.0% |
!! | AACTTATGTTGCTACTTTGT+GGG | - | chr3.4:71346867-71346886 | MS.gene031882:intron | 30.0% |
!! | ATTTCTATTTGCTTTTAGGC+TGG | + | chr3.4:71344969-71344988 | None:intergenic | 30.0% |
!! | TAACTTATGTTGCTACTTTG+TGG | - | chr3.4:71346866-71346885 | MS.gene031882:intron | 30.0% |
!! | TACAAGTTTTGATCTAGTAC+TGG | + | chr3.4:71345759-71345778 | None:intergenic | 30.0% |
!!! | CCTTTTTTCAATTTTTCAGC+TGG | + | chr3.4:71347618-71347637 | None:intergenic | 30.0% |
!!! | CTAGAACCTTACCTTTTTTT+TGG | - | chr3.4:71344918-71344937 | MS.gene031882:intron | 30.0% |
!!! | GGATTCCAATTATTTTTTCC+AGG | + | chr3.4:71345964-71345983 | None:intergenic | 30.0% |
AAACTAATGTGCTTACGCAA+AGG | - | chr3.4:71345911-71345930 | MS.gene031882:intron | 35.0% | |
AAAGAGGAAGAAAATGATCG+AGG | + | chr3.4:71344148-71344167 | None:intergenic | 35.0% | |
AAATTGCAAGACCAAGCAAA+AGG | + | chr3.4:71344784-71344803 | None:intergenic | 35.0% | |
AGTGTGACAAACTAGTAGTA+AGG | + | chr3.4:71346042-71346061 | None:intergenic | 35.0% | |
ATGATTATCACTGCTGCATT+GGG | - | chr3.4:71347260-71347279 | MS.gene031882:intron | 35.0% | |
ATTGAAGGGACAATATAGCA+AGG | + | chr3.4:71343988-71344007 | None:intergenic | 35.0% | |
CCTGCCTATCAGATTATAAA+GGG | - | chr3.4:71346408-71346427 | MS.gene031882:intron | 35.0% | |
CCTTTATAATCTGATAGGCA+GGG | + | chr3.4:71346410-71346429 | None:intergenic | 35.0% | |
CTGAAAGATGTGACAAAAAC+TGG | + | chr3.4:71347230-71347249 | None:intergenic | 35.0% | |
GATACTGCGAATATAGCATT+AGG | + | chr3.4:71344496-71344515 | None:intergenic | 35.0% | |
GATCAATTGCCAATCAAGAA+TGG | - | chr3.4:71347546-71347565 | MS.gene031882:CDS | 35.0% | |
GCAGTGATAATCATACATAG+TGG | + | chr3.4:71347254-71347273 | None:intergenic | 35.0% | |
GCGAGAAAAATAAATTGTGG+AGG | - | chr3.4:71345367-71345386 | MS.gene031882:intron | 35.0% | |
GCTATATTGTCCCTTCAATT+TGG | - | chr3.4:71343989-71344008 | MS.gene031882:CDS | 35.0% | |
GGAATGGCATATTATGTACA+AGG | - | chr3.4:71347182-71347201 | MS.gene031882:intron | 35.0% | |
GGAGCTATTATCATCGTTAT+TGG | - | chr3.4:71347447-71347466 | MS.gene031882:CDS | 35.0% | |
GTGTGACAAACTAGTAGTAA+GGG | + | chr3.4:71346041-71346060 | None:intergenic | 35.0% | |
TACAACCGTTCCAATTACTT+TGG | + | chr3.4:71346349-71346368 | None:intergenic | 35.0% | |
TAGCAATCCCCATGAATTAT+AGG | - | chr3.4:71345535-71345554 | MS.gene031882:intron | 35.0% | |
TATCAGATTATAAAGGGAGG+AGG | - | chr3.4:71346414-71346433 | MS.gene031882:intron | 35.0% | |
TATGATTATCACTGCTGCAT+TGG | - | chr3.4:71347259-71347278 | MS.gene031882:intron | 35.0% | |
TCCTCCCTTTATAATCTGAT+AGG | + | chr3.4:71346415-71346434 | None:intergenic | 35.0% | |
TCCTCGTCCACTAATTAATA+TGG | + | chr3.4:71346007-71346026 | None:intergenic | 35.0% | |
TTAGCTGAACAAGTTCATCT+TGG | - | chr3.4:71347293-71347312 | MS.gene031882:intron | 35.0% | |
TTATAATGGCTCTCACTTTC+AGG | - | chr3.4:71345850-71345869 | MS.gene031882:intron | 35.0% | |
TTGCCTTCATAAGCTTAACA+AGG | - | chr3.4:71344356-71344375 | MS.gene031882:CDS | 35.0% | |
! | CTTATGATTTTTGTGGTGGT+GGG | + | chr3.4:71345066-71345085 | None:intergenic | 35.0% |
! | GCTAATGGTAAGTTGAACAA+TGG | - | chr3.4:71343935-71343954 | MS.gene031882:CDS | 35.0% |
! | TCAGGATCAGACATTTTTGA+AGG | - | chr3.4:71347576-71347595 | MS.gene031882:CDS | 35.0% |
! | TGCTTGATGGGTATTATTGA+GGG | - | chr3.4:71346946-71346965 | MS.gene031882:intron | 35.0% |
! | TTGCTTGATGGGTATTATTG+AGG | - | chr3.4:71346945-71346964 | MS.gene031882:intron | 35.0% |
!! | GCTTTTAGGCTGGTTAAATA+AGG | + | chr3.4:71344959-71344978 | None:intergenic | 35.0% |
AATCCGACAATTTCGAACCA+TGG | - | chr3.4:71345979-71345998 | MS.gene031882:intron | 40.0% | |
ACTGCGAATATAGCATTAGG+TGG | + | chr3.4:71344493-71344512 | None:intergenic | 40.0% | |
AGAAAATGCAGGGCAATATG+AGG | + | chr3.4:71345015-71345034 | None:intergenic | 40.0% | |
AGGAAGAAAATGATCGAGGA+AGG | + | chr3.4:71344144-71344163 | None:intergenic | 40.0% | |
AGGGACAATATAGCAAGGTA+TGG | + | chr3.4:71343983-71344002 | None:intergenic | 40.0% | |
ATCCGACAATTTCGAACCAT+GGG | - | chr3.4:71345980-71345999 | MS.gene031882:intron | 40.0% | |
ATGGAGGACCAAAATGCTAA+TGG | - | chr3.4:71343920-71343939 | MS.gene031882:CDS | 40.0% | |
ATTGTGGCGACCATTAGATA+TGG | - | chr3.4:71346682-71346701 | MS.gene031882:intron | 40.0% | |
CACTAATTAATATGGCCCCA+TGG | + | chr3.4:71345999-71346018 | None:intergenic | 40.0% | |
CATAACCATAGCTCCAGAAA+CGG | + | chr3.4:71346373-71346392 | None:intergenic | 40.0% | |
CATAATCTTTCTTGGTTGGG+TGG | - | chr3.4:71344676-71344695 | MS.gene031882:intron | 40.0% | |
CATGGGGCCATATTAATTAG+TGG | - | chr3.4:71345997-71346016 | MS.gene031882:intron | 40.0% | |
CCACCACCACAAAAATCATA+AGG | - | chr3.4:71345064-71345083 | MS.gene031882:CDS | 40.0% | |
CCCTGCCTATCAGATTATAA+AGG | - | chr3.4:71346407-71346426 | MS.gene031882:intron | 40.0% | |
CCCTTTATAATCTGATAGGC+AGG | + | chr3.4:71346411-71346430 | None:intergenic | 40.0% | |
CGTAGCCAAAGTAATTGGAA+CGG | - | chr3.4:71346341-71346360 | MS.gene031882:intron | 40.0% | |
CTGAACAAGTTCATCTTGGA+AGG | - | chr3.4:71347297-71347316 | MS.gene031882:intron | 40.0% | |
CTGCAATTTGTACTTTGAGC+CGG | + | chr3.4:71345676-71345695 | None:intergenic | 40.0% | |
GAAAATGCAGGGCAATATGA+GGG | + | chr3.4:71345014-71345033 | None:intergenic | 40.0% | |
GACACATCAGAGATAGGAAA+AGG | - | chr3.4:71347513-71347532 | MS.gene031882:CDS | 40.0% | |
GCCTATCAGATTATAAAGGG+AGG | - | chr3.4:71346411-71346430 | MS.gene031882:intron | 40.0% | |
GGGGATGTACATCATTACTA+TGG | - | chr3.4:71344018-71344037 | MS.gene031882:CDS | 40.0% | |
GTCCCTTCAATTTGGTTACT+CGG | - | chr3.4:71343997-71344016 | MS.gene031882:CDS | 40.0% | |
GTTGCACAGTGTAACAATTG+TGG | - | chr3.4:71346666-71346685 | MS.gene031882:intron | 40.0% | |
TAGCTAGAATTGTGTGTTCC+TGG | - | chr3.4:71345943-71345962 | MS.gene031882:intron | 40.0% | |
TCAAACATGGTATGAGCCAT+TGG | - | chr3.4:71344047-71344066 | MS.gene031882:CDS | 40.0% | |
TCAGAGATAGGAAAAGGTGA+AGG | - | chr3.4:71347519-71347538 | MS.gene031882:CDS | 40.0% | |
TCCCTTCAATTTGGTTACTC+GGG | - | chr3.4:71343998-71344017 | MS.gene031882:CDS | 40.0% | |
TCTTGATTGGCAATTGATCC+TGG | + | chr3.4:71347545-71347564 | None:intergenic | 40.0% | |
TGAAAGAGACATGAGTGTGT+GGG | - | chr3.4:71346990-71347009 | MS.gene031882:intron | 40.0% | |
TGGTCTTTACACTGTGGTAT+GGG | - | chr3.4:71347467-71347486 | MS.gene031882:CDS | 40.0% | |
TTGAAAGAGACATGAGTGTG+TGG | - | chr3.4:71346989-71347008 | MS.gene031882:intron | 40.0% | |
TTTCCTTGAGTAAGGCTCTT+CGG | - | chr3.4:71344460-71344479 | MS.gene031882:intron | 40.0% | |
! | AACAGCATGGATTTGCTTGA+TGG | - | chr3.4:71346933-71346952 | MS.gene031882:intron | 40.0% |
! | ACAGCATGGATTTGCTTGAT+GGG | - | chr3.4:71346934-71346953 | MS.gene031882:intron | 40.0% |
! | CCTTATGATTTTTGTGGTGG+TGG | + | chr3.4:71345067-71345086 | None:intergenic | 40.0% |
! | CGTCCTTATGATTTTTGTGG+TGG | + | chr3.4:71345070-71345089 | None:intergenic | 40.0% |
! | CTAGTTTGTCACACTTTGCA+AGG | - | chr3.4:71346047-71346066 | MS.gene031882:intron | 40.0% |
! | GCCATATTAATTAGTGGACG+AGG | - | chr3.4:71346003-71346022 | MS.gene031882:intron | 40.0% |
! | TATTGCCCTGCATTTTCTAG+CGG | - | chr3.4:71345017-71345036 | MS.gene031882:intron | 40.0% |
! | TTGGTCTTTACACTGTGGTA+TGG | - | chr3.4:71347466-71347485 | MS.gene031882:CDS | 40.0% |
!! | CGTTATTGGTCTTTACACTG+TGG | - | chr3.4:71347461-71347480 | MS.gene031882:CDS | 40.0% |
AAGATGGGGAGAGTCATCTT+TGG | + | chr3.4:71344419-71344438 | None:intergenic | 45.0% | |
AATCTTTCTTGGTTGGGTGG+AGG | - | chr3.4:71344679-71344698 | MS.gene031882:intron | 45.0% | |
ACCAACCATCCGACCAAAAT+TGG | - | chr3.4:71346469-71346488 | MS.gene031882:intron | 45.0% | |
AGCTGGAAGGACATTAACAG+TGG | + | chr3.4:71345823-71345842 | None:intergenic | 45.0% | |
ATAATGGTCCCCACAACTGT+TGG | - | chr3.4:71346724-71346743 | MS.gene031882:intron | 45.0% | |
ATCCGACCAAAATTGGGTGA+TGG | - | chr3.4:71346476-71346495 | MS.gene031882:intron | 45.0% | |
ATGAGTCCGCTAGAAAATGC+AGG | + | chr3.4:71345026-71345045 | None:intergenic | 45.0% | |
CACAGCGTAGCCAAAGTAAT+TGG | - | chr3.4:71346336-71346355 | MS.gene031882:intron | 45.0% | |
CAGAGCTATCACTAACAGCA+TGG | - | chr3.4:71346920-71346939 | MS.gene031882:intron | 45.0% | |
CCAACCATCCGACCAAAATT+GGG | - | chr3.4:71346470-71346489 | MS.gene031882:intron | 45.0% | |
CCCCGAGTAACCAAATTGAA+GGG | + | chr3.4:71344002-71344021 | None:intergenic | 45.0% | |
CCCTTCAATTTGGTTACTCG+GGG | - | chr3.4:71343999-71344018 | MS.gene031882:CDS | 45.0% | |
CGTGAAGACACATCAGAGAT+AGG | - | chr3.4:71347507-71347526 | MS.gene031882:CDS | 45.0% | |
GCACTTGGTTTCCTTGAGTA+AGG | - | chr3.4:71344452-71344471 | MS.gene031882:intron | 45.0% | |
GGGGATTGCTAAACAGCTAT+TGG | + | chr3.4:71345526-71345545 | None:intergenic | 45.0% | |
GGTCTTCTACCTCTATTGCA+CGG | - | chr3.4:71345150-71345169 | MS.gene031882:CDS | 45.0% | |
GGTCTTTACACTGTGGTATG+GGG | - | chr3.4:71347468-71347487 | MS.gene031882:CDS | 45.0% | |
GTCTTCTACCTCTATTGCAC+GGG | - | chr3.4:71345151-71345170 | MS.gene031882:CDS | 45.0% | |
TAATTGCGGCCACAACATGA+CGG | + | chr3.4:71344087-71344106 | None:intergenic | 45.0% | |
TCAGGTTAGAGTCAGTGAAC+TGG | - | chr3.4:71346304-71346323 | MS.gene031882:intron | 45.0% | |
TCATTGTACCCGTGCAATAG+AGG | + | chr3.4:71345162-71345181 | None:intergenic | 45.0% | |
TCCCCGAGTAACCAAATTGA+AGG | + | chr3.4:71344003-71344022 | None:intergenic | 45.0% | |
TCCGACAATTTCGAACCATG+GGG | - | chr3.4:71345981-71346000 | MS.gene031882:intron | 45.0% | |
TCCGACCAAAATTGGGTGAT+GGG | - | chr3.4:71346477-71346496 | MS.gene031882:intron | 45.0% | |
TGAGTCCGCTAGAAAATGCA+GGG | + | chr3.4:71345025-71345044 | None:intergenic | 45.0% | |
TTCCTTGAGTAAGGCTCTTC+GGG | - | chr3.4:71344461-71344480 | MS.gene031882:intron | 45.0% | |
! | TCAAGTTGTTGTAGTTGGGC+TGG | - | chr3.4:71346516-71346535 | MS.gene031882:intron | 45.0% |
! | TTGTGCCCATCACCCAATTT+TGG | + | chr3.4:71346485-71346504 | None:intergenic | 45.0% |
!! | ATCACCCAATTTTGGTCGGA+TGG | + | chr3.4:71346477-71346496 | None:intergenic | 45.0% |
!! | ATTTTGGTCGGATGGTTGGT+CGG | + | chr3.4:71346469-71346488 | None:intergenic | 45.0% |
!! | TGTAACCGTTTCTGGAGCTA+TGG | - | chr3.4:71346365-71346384 | MS.gene031882:intron | 45.0% |
!! | ATAGATAAATAAAATATATT+AGG | + | chr3.4:71344638-71344657 | None:intergenic | 5.0% |
!!! | TATATATTATTTTAAAGTTT+TGG | - | chr3.4:71345446-71345465 | MS.gene031882:intron | 5.0% |
AACCAGGGTGTGATATGCTC+TGG | - | chr3.4:71347161-71347180 | MS.gene031882:intron | 50.0% | |
ATCCCGAAGAGCCTTACTCA+AGG | + | chr3.4:71344466-71344485 | None:intergenic | 50.0% | |
CCACTATCCTCAGGAAGATG+GGG | + | chr3.4:71344433-71344452 | None:intergenic | 50.0% | |
GACATGAGTGTGTGGGTCAT+AGG | - | chr3.4:71346997-71347016 | MS.gene031882:intron | 50.0% | |
GAGTGTGTGGGTCATAGGTT+GGG | - | chr3.4:71347002-71347021 | MS.gene031882:intron | 50.0% | |
GATAGGAAAAGGTGAAGGCC+AGG | - | chr3.4:71347524-71347543 | MS.gene031882:CDS | 50.0% | |
GCCACTATCCTCAGGAAGAT+GGG | + | chr3.4:71344434-71344453 | None:intergenic | 50.0% | |
GCCCCATGGTTCGAAATTGT+CGG | + | chr3.4:71345985-71346004 | None:intergenic | 50.0% | |
GGAACGGTTGTAACCGTTTC+TGG | - | chr3.4:71346357-71346376 | MS.gene031882:intron | 50.0% | |
GGGGTTGTAACTAGAGAACG+TGG | - | chr3.4:71347203-71347222 | MS.gene031882:intron | 50.0% | |
GGTACACGGAGAGAATCCAA+TGG | + | chr3.4:71344066-71344085 | None:intergenic | 50.0% | |
GGTTCTCCATACTCTCTGCA+CGG | + | chr3.4:71345197-71345216 | None:intergenic | 50.0% | |
GTTCTCCATACTCTCTGCAC+GGG | + | chr3.4:71345196-71345215 | None:intergenic | 50.0% | |
TGAGTGTGTGGGTCATAGGT+TGG | - | chr3.4:71347001-71347020 | MS.gene031882:intron | 50.0% | |
TGCCACTATCCTCAGGAAGA+TGG | + | chr3.4:71344435-71344454 | None:intergenic | 50.0% | |
TTCCAGAGCATATCACACCC+TGG | + | chr3.4:71347166-71347185 | None:intergenic | 50.0% | |
! | AACCAAGTGCCACTATCCTC+AGG | + | chr3.4:71344442-71344461 | None:intergenic | 50.0% |
! | ACAGAGCGTTCCAACAGTTG+TGG | + | chr3.4:71346737-71346756 | None:intergenic | 50.0% |
! | AGAGCGTTCCAACAGTTGTG+GGG | + | chr3.4:71346735-71346754 | None:intergenic | 50.0% |
! | CAGAGCGTTCCAACAGTTGT+GGG | + | chr3.4:71346736-71346755 | None:intergenic | 50.0% |
! | GCTGTTAGTGATAGCTCTGC+TGG | + | chr3.4:71346919-71346938 | None:intergenic | 50.0% |
! | TTCCTGAGGATAGTGGCACT+TGG | - | chr3.4:71344437-71344456 | MS.gene031882:intron | 50.0% |
!! | CCCAATTTTGGTCGGATGGT+TGG | + | chr3.4:71346473-71346492 | None:intergenic | 50.0% |
!! | GCCCATCACCCAATTTTGGT+CGG | + | chr3.4:71346481-71346500 | None:intergenic | 50.0% |
!! | GGGTGTGATATGCTCTGGAA+TGG | - | chr3.4:71347166-71347185 | MS.gene031882:intron | 50.0% |
CCCCATCTTCCTGAGGATAG+TGG | - | chr3.4:71344430-71344449 | MS.gene031882:intron | 55.0% | |
CTCCGTGTACCGTCATGTTG+TGG | - | chr3.4:71344075-71344094 | MS.gene031882:CDS | 55.0% | |
CTTTCGAGCACAAGCGCGAA+AGG | + | chr3.4:71344118-71344137 | None:intergenic | 55.0% | |
CTTTCGCGCTTGTGCTCGAA+AGG | - | chr3.4:71344116-71344135 | MS.gene031882:CDS | 55.0% | |
GGCCACAACATGACGGTACA+CGG | + | chr3.4:71344080-71344099 | None:intergenic | 55.0% | |
TGACTCTCCCCATCTTCCTG+AGG | - | chr3.4:71344423-71344442 | MS.gene031882:intron | 55.0% | |
! | GGGTCATAGGTTGGGACTCA+AGG | - | chr3.4:71347010-71347029 | MS.gene031882:intron | 55.0% |
CAGCACCCGTGCAGAGAGTA+TGG | - | chr3.4:71345188-71345207 | MS.gene031882:CDS | 60.0% | |
! | GTCGGATGGTTGGTCGGTTG+CGG | + | chr3.4:71346463-71346482 | None:intergenic | 60.0% |
! | GGATGGTTGGTCGGTTGCGG+CGG | + | chr3.4:71346460-71346479 | None:intergenic | 65.0% |
! | GGCGGAGGCGTGGTGGTTGA+TGG | + | chr3.4:71346442-71346461 | None:intergenic | 70.0% |
! | TGGTTGGTCGGTTGCGGCGG+AGG | + | chr3.4:71346457-71346476 | None:intergenic | 70.0% |
! | GGTCGGTTGCGGCGGAGGCG+TGG | + | chr3.4:71346452-71346471 | None:intergenic | 80.0% |
!! | CGGTTGCGGCGGAGGCGTGG+TGG | + | chr3.4:71346449-71346468 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 71343920 | 71347662 | 71343920 | ID=MS.gene031882 |
chr3.4 | mRNA | 71343920 | 71347662 | 71343920 | ID=MS.gene031882.t1;Parent=MS.gene031882 |
chr3.4 | exon | 71347445 | 71347662 | 71347445 | ID=MS.gene031882.t1.exon1;Parent=MS.gene031882.t1 |
chr3.4 | CDS | 71347445 | 71347662 | 71347445 | ID=cds.MS.gene031882.t1;Parent=MS.gene031882.t1 |
chr3.4 | exon | 71347114 | 71347176 | 71347114 | ID=MS.gene031882.t1.exon2;Parent=MS.gene031882.t1 |
chr3.4 | CDS | 71347114 | 71347176 | 71347114 | ID=cds.MS.gene031882.t1;Parent=MS.gene031882.t1 |
chr3.4 | exon | 71345711 | 71345827 | 71345711 | ID=MS.gene031882.t1.exon3;Parent=MS.gene031882.t1 |
chr3.4 | CDS | 71345711 | 71345827 | 71345711 | ID=cds.MS.gene031882.t1;Parent=MS.gene031882.t1 |
chr3.4 | exon | 71345028 | 71345274 | 71345028 | ID=MS.gene031882.t1.exon4;Parent=MS.gene031882.t1 |
chr3.4 | CDS | 71345028 | 71345274 | 71345028 | ID=cds.MS.gene031882.t1;Parent=MS.gene031882.t1 |
chr3.4 | exon | 71344529 | 71344687 | 71344529 | ID=MS.gene031882.t1.exon5;Parent=MS.gene031882.t1 |
chr3.4 | CDS | 71344529 | 71344687 | 71344529 | ID=cds.MS.gene031882.t1;Parent=MS.gene031882.t1 |
chr3.4 | exon | 71344264 | 71344415 | 71344264 | ID=MS.gene031882.t1.exon6;Parent=MS.gene031882.t1 |
chr3.4 | CDS | 71344264 | 71344415 | 71344264 | ID=cds.MS.gene031882.t1;Parent=MS.gene031882.t1 |
chr3.4 | exon | 71343920 | 71344142 | 71343920 | ID=MS.gene031882.t1.exon7;Parent=MS.gene031882.t1 |
chr3.4 | CDS | 71343920 | 71344142 | 71343920 | ID=cds.MS.gene031882.t1;Parent=MS.gene031882.t1 |
Gene Sequence |
Protein sequence |