Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62998.t1 | XP_013466498.1 | 98.2 | 382 | 7 | 0 | 1 | 382 | 1 | 382 | 7.00E-208 | 733 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62998.t1 | Q9LPF1 | 64.0 | 353 | 124 | 2 | 12 | 361 | 6 | 358 | 2.2e-125 | 450.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62998.t1 | I3T3M3 | 98.2 | 382 | 7 | 0 | 1 | 382 | 1 | 382 | 5.0e-208 | 733.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene62998 | MS.gene33120 | PPI |
MS.gene62998 | MS.gene91824 | PPI |
MS.gene62998 | MS.gene33118 | PPI |
MS.gene016080 | MS.gene62998 | PPI |
MS.gene62998 | MS.gene62756 | PPI |
MS.gene022545 | MS.gene62998 | PPI |
MS.gene62998 | MS.gene016085 | PPI |
MS.gene62998 | MS.gene022543 | PPI |
MS.gene62998 | MS.gene051484 | PPI |
MS.gene62998 | MS.gene055334 | PPI |
MS.gene62998 | MS.gene055336 | PPI |
MS.gene62998 | MS.gene016084 | PPI |
MS.gene62998 | MS.gene051482 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62998.t1 | MTR_1g030580 | 98.168 | 382 | 7 | 0 | 1 | 382 | 1 | 382 | 0.0 | 775 |
MS.gene62998.t1 | MTR_3g072500 | 77.151 | 372 | 79 | 5 | 7 | 372 | 9 | 380 | 0.0 | 593 |
MS.gene62998.t1 | MTR_3g072500 | 75.451 | 277 | 64 | 4 | 100 | 372 | 1 | 277 | 1.17e-150 | 427 |
MS.gene62998.t1 | MTR_3g072500 | 78.462 | 260 | 52 | 3 | 7 | 262 | 9 | 268 | 3.52e-150 | 426 |
MS.gene62998.t1 | MTR_7g100050 | 52.989 | 368 | 161 | 6 | 5 | 367 | 4 | 364 | 7.93e-130 | 377 |
MS.gene62998.t1 | MTR_3g072530 | 52.247 | 356 | 161 | 3 | 8 | 354 | 6 | 361 | 1.80e-128 | 374 |
MS.gene62998.t1 | MTR_1g068630 | 52.174 | 345 | 159 | 4 | 12 | 354 | 11 | 351 | 9.70e-123 | 359 |
MS.gene62998.t1 | MTR_3g072560 | 50.000 | 370 | 177 | 4 | 16 | 379 | 18 | 385 | 6.00e-119 | 350 |
MS.gene62998.t1 | MTR_1g030600 | 51.652 | 333 | 158 | 3 | 5 | 334 | 7 | 339 | 2.80e-116 | 343 |
MS.gene62998.t1 | MTR_8g041390 | 48.179 | 357 | 176 | 3 | 9 | 360 | 6 | 358 | 8.39e-116 | 342 |
MS.gene62998.t1 | MTR_3g072500 | 76.303 | 211 | 46 | 3 | 3 | 209 | 5 | 215 | 9.55e-115 | 333 |
MS.gene62998.t1 | MTR_3g012420 | 49.133 | 346 | 172 | 3 | 16 | 359 | 17 | 360 | 9.60e-114 | 337 |
MS.gene62998.t1 | MTR_0096s0100 | 46.571 | 350 | 181 | 5 | 5 | 351 | 7 | 353 | 5.42e-108 | 322 |
MS.gene62998.t1 | MTR_3g072520 | 44.715 | 369 | 188 | 5 | 8 | 361 | 1 | 368 | 5.99e-102 | 307 |
MS.gene62998.t1 | MTR_1g051120 | 42.415 | 323 | 185 | 1 | 13 | 334 | 13 | 335 | 5.26e-86 | 265 |
MS.gene62998.t1 | MTR_1g074120 | 41.329 | 346 | 197 | 3 | 13 | 354 | 13 | 356 | 6.60e-86 | 265 |
MS.gene62998.t1 | MTR_1g074070 | 41.265 | 332 | 178 | 3 | 11 | 334 | 11 | 333 | 8.91e-86 | 264 |
MS.gene62998.t1 | MTR_1g074160 | 39.776 | 357 | 200 | 4 | 6 | 360 | 3 | 346 | 1.61e-84 | 261 |
MS.gene62998.t1 | MTR_1g074020 | 42.901 | 324 | 182 | 2 | 12 | 334 | 9 | 330 | 9.76e-84 | 259 |
MS.gene62998.t1 | MTR_1g073990 | 42.296 | 331 | 173 | 3 | 13 | 334 | 13 | 334 | 1.63e-82 | 256 |
MS.gene62998.t1 | MTR_3g072530 | 43.793 | 290 | 127 | 2 | 9 | 262 | 7 | 296 | 5.20e-78 | 243 |
MS.gene62998.t1 | MTR_6g036450 | 35.988 | 339 | 213 | 2 | 12 | 347 | 12 | 349 | 2.74e-77 | 243 |
MS.gene62998.t1 | MTR_3g112480 | 36.986 | 365 | 209 | 2 | 13 | 364 | 17 | 373 | 9.97e-77 | 242 |
MS.gene62998.t1 | MTR_1g023180 | 36.554 | 383 | 205 | 4 | 1 | 356 | 1 | 372 | 1.07e-76 | 243 |
MS.gene62998.t1 | MTR_1g070175 | 38.820 | 322 | 193 | 2 | 13 | 334 | 13 | 330 | 1.86e-76 | 241 |
MS.gene62998.t1 | MTR_2g007990 | 36.193 | 373 | 220 | 5 | 6 | 372 | 5 | 365 | 1.48e-71 | 229 |
MS.gene62998.t1 | MTR_5g021160 | 35.014 | 357 | 218 | 3 | 13 | 364 | 4 | 351 | 8.06e-71 | 226 |
MS.gene62998.t1 | MTR_3g095420 | 33.994 | 353 | 225 | 4 | 12 | 357 | 3 | 354 | 1.04e-70 | 226 |
MS.gene62998.t1 | MTR_7g111830 | 37.015 | 335 | 204 | 2 | 11 | 338 | 2 | 336 | 5.04e-69 | 222 |
MS.gene62998.t1 | MTR_3g095460 | 34.441 | 331 | 210 | 2 | 12 | 337 | 1 | 329 | 3.16e-67 | 216 |
MS.gene62998.t1 | MTR_8g092650 | 35.821 | 335 | 201 | 2 | 12 | 336 | 1 | 331 | 6.21e-67 | 216 |
MS.gene62998.t1 | MTR_2g016710 | 34.066 | 364 | 233 | 2 | 10 | 368 | 2 | 363 | 7.50e-67 | 216 |
MS.gene62998.t1 | MTR_2g007960 | 35.054 | 368 | 219 | 4 | 10 | 369 | 6 | 361 | 1.45e-66 | 216 |
MS.gene62998.t1 | MTR_4g094340 | 35.174 | 344 | 215 | 3 | 7 | 345 | 18 | 358 | 2.22e-66 | 215 |
MS.gene62998.t1 | MTR_4g094340 | 35.207 | 338 | 211 | 3 | 13 | 345 | 6 | 340 | 4.47e-66 | 214 |
MS.gene62998.t1 | MTR_6g081840 | 35.795 | 352 | 212 | 5 | 25 | 370 | 19 | 362 | 6.08e-66 | 213 |
MS.gene62998.t1 | MTR_2g065550 | 33.236 | 343 | 220 | 4 | 17 | 356 | 11 | 347 | 1.24e-63 | 207 |
MS.gene62998.t1 | MTR_2g007970 | 35.244 | 349 | 219 | 3 | 10 | 351 | 2 | 350 | 6.78e-63 | 206 |
MS.gene62998.t1 | MTR_4g094342 | 34.557 | 327 | 209 | 2 | 8 | 329 | 5 | 331 | 1.29e-62 | 205 |
MS.gene62998.t1 | MTR_2g007260 | 34.247 | 365 | 221 | 3 | 10 | 367 | 8 | 360 | 1.77e-61 | 203 |
MS.gene62998.t1 | MTR_2g027030 | 34.769 | 325 | 210 | 1 | 12 | 334 | 8 | 332 | 2.91e-61 | 201 |
MS.gene62998.t1 | MTR_3g095450 | 33.929 | 336 | 214 | 4 | 14 | 342 | 3 | 337 | 6.00e-61 | 201 |
MS.gene62998.t1 | MTR_8g006010 | 35.380 | 342 | 214 | 4 | 17 | 352 | 11 | 351 | 9.05e-61 | 201 |
MS.gene62998.t1 | MTR_3g112480 | 36.893 | 309 | 174 | 2 | 69 | 364 | 18 | 318 | 9.11e-60 | 197 |
MS.gene62998.t1 | MTR_8g006120 | 34.473 | 351 | 227 | 2 | 17 | 366 | 11 | 359 | 9.67e-60 | 198 |
MS.gene62998.t1 | MTR_2g102340 | 31.694 | 366 | 247 | 3 | 10 | 374 | 6 | 369 | 1.83e-58 | 194 |
MS.gene62998.t1 | MTR_1g114210 | 32.277 | 347 | 220 | 4 | 16 | 361 | 11 | 343 | 2.33e-58 | 193 |
MS.gene62998.t1 | MTR_1g038560 | 33.046 | 348 | 215 | 5 | 16 | 360 | 3 | 335 | 4.82e-58 | 192 |
MS.gene62998.t1 | MTR_4g094352 | 33.069 | 378 | 233 | 6 | 10 | 367 | 6 | 383 | 5.03e-58 | 194 |
MS.gene62998.t1 | MTR_3g090550 | 33.235 | 340 | 212 | 5 | 17 | 351 | 7 | 336 | 2.49e-57 | 191 |
MS.gene62998.t1 | MTR_1g074160 | 39.147 | 258 | 152 | 3 | 6 | 261 | 3 | 257 | 3.86e-57 | 187 |
MS.gene62998.t1 | MTR_4g106720 | 31.915 | 329 | 223 | 1 | 7 | 334 | 2 | 330 | 4.26e-56 | 187 |
MS.gene62998.t1 | MTR_0103s0090 | 32.500 | 360 | 237 | 6 | 13 | 369 | 8 | 364 | 3.70e-55 | 186 |
MS.gene62998.t1 | MTR_1g052205 | 40.467 | 257 | 126 | 9 | 124 | 364 | 6 | 251 | 1.41e-54 | 181 |
MS.gene62998.t1 | MTR_4g094362 | 32.927 | 328 | 218 | 2 | 10 | 335 | 8 | 335 | 2.01e-54 | 184 |
MS.gene62998.t1 | MTR_5g021160 | 35.740 | 277 | 164 | 3 | 93 | 364 | 1 | 268 | 4.80e-54 | 180 |
MS.gene62998.t1 | MTR_3g095440 | 32.143 | 336 | 220 | 4 | 14 | 342 | 3 | 337 | 6.46e-54 | 182 |
MS.gene62998.t1 | MTR_8g006090 | 33.824 | 340 | 222 | 2 | 17 | 353 | 12 | 351 | 7.22e-54 | 182 |
MS.gene62998.t1 | MTR_5g034910 | 34.663 | 326 | 201 | 4 | 21 | 340 | 12 | 331 | 1.08e-53 | 181 |
MS.gene62998.t1 | MTR_5g025340 | 35.103 | 339 | 204 | 4 | 11 | 334 | 5 | 342 | 1.88e-53 | 182 |
MS.gene62998.t1 | MTR_1g030400 | 30.252 | 357 | 239 | 3 | 25 | 371 | 16 | 372 | 1.89e-53 | 181 |
MS.gene62998.t1 | MTR_2g016710 | 34.653 | 303 | 196 | 1 | 10 | 312 | 2 | 302 | 4.26e-53 | 179 |
MS.gene62998.t1 | MTR_5g025370 | 34.127 | 378 | 225 | 5 | 11 | 366 | 5 | 380 | 6.29e-53 | 180 |
MS.gene62998.t1 | MTR_4g094340 | 34.420 | 276 | 174 | 2 | 75 | 345 | 1 | 274 | 8.02e-53 | 177 |
MS.gene62998.t1 | MTR_5g034990 | 32.317 | 328 | 212 | 4 | 10 | 334 | 8 | 328 | 2.78e-52 | 177 |
MS.gene62998.t1 | MTR_4g129650 | 30.263 | 380 | 244 | 8 | 11 | 382 | 3 | 369 | 2.55e-51 | 176 |
MS.gene62998.t1 | MTR_5g034980 | 34.579 | 321 | 204 | 4 | 21 | 338 | 12 | 329 | 3.14e-51 | 175 |
MS.gene62998.t1 | MTR_4g094360 | 31.006 | 358 | 237 | 3 | 10 | 357 | 8 | 365 | 8.39e-51 | 175 |
MS.gene62998.t1 | MTR_5g025400 | 34.111 | 343 | 208 | 3 | 15 | 340 | 10 | 351 | 1.07e-50 | 174 |
MS.gene62998.t1 | MTR_5g025290 | 32.203 | 354 | 223 | 5 | 16 | 353 | 11 | 363 | 1.79e-50 | 174 |
MS.gene62998.t1 | MTR_5g034930 | 34.431 | 334 | 206 | 6 | 21 | 350 | 11 | 335 | 2.44e-50 | 172 |
MS.gene62998.t1 | MTR_5g025290 | 32.203 | 354 | 223 | 5 | 16 | 353 | 39 | 391 | 2.96e-50 | 174 |
MS.gene62998.t1 | MTR_5g021160 | 34.981 | 263 | 161 | 3 | 13 | 270 | 4 | 261 | 2.49e-49 | 167 |
MS.gene62998.t1 | MTR_5g025330 | 31.378 | 392 | 237 | 5 | 8 | 368 | 1 | 391 | 5.03e-48 | 171 |
MS.gene62998.t1 | MTR_0103s0090 | 37.452 | 259 | 159 | 3 | 101 | 357 | 5 | 262 | 6.31e-48 | 164 |
MS.gene62998.t1 | MTR_8g092650 | 36.653 | 251 | 145 | 2 | 96 | 336 | 7 | 253 | 1.78e-47 | 162 |
MS.gene62998.t1 | MTR_8g006090 | 35.741 | 263 | 167 | 1 | 93 | 353 | 9 | 271 | 1.61e-46 | 160 |
MS.gene62998.t1 | MTR_8g006050 | 31.161 | 353 | 204 | 6 | 17 | 366 | 12 | 328 | 6.90e-46 | 161 |
MS.gene62998.t1 | MTR_1g014510 | 30.114 | 352 | 231 | 5 | 13 | 357 | 8 | 351 | 3.65e-45 | 161 |
MS.gene62998.t1 | MTR_3g112480 | 35.039 | 254 | 144 | 2 | 124 | 364 | 1 | 246 | 8.30e-44 | 153 |
MS.gene62998.t1 | MTR_1g051120 | 39.086 | 197 | 120 | 0 | 13 | 209 | 13 | 209 | 1.31e-43 | 151 |
MS.gene62998.t1 | MTR_1g051120 | 38.889 | 198 | 121 | 0 | 13 | 210 | 13 | 210 | 1.81e-43 | 152 |
MS.gene62998.t1 | MTR_5g034970 | 35.385 | 325 | 185 | 5 | 20 | 338 | 11 | 316 | 2.63e-43 | 154 |
MS.gene62998.t1 | MTR_8g006090 | 33.333 | 297 | 197 | 1 | 17 | 312 | 12 | 308 | 1.22e-42 | 151 |
MS.gene62998.t1 | MTR_3g019050 | 26.271 | 354 | 244 | 3 | 19 | 370 | 21 | 359 | 1.36e-42 | 153 |
MS.gene62998.t1 | MTR_6g007743 | 30.476 | 315 | 208 | 5 | 41 | 349 | 37 | 346 | 1.45e-41 | 150 |
MS.gene62998.t1 | MTR_5g068790 | 24.672 | 381 | 278 | 4 | 3 | 375 | 5 | 384 | 1.55e-41 | 150 |
MS.gene62998.t1 | MTR_8g072350 | 28.272 | 382 | 248 | 6 | 16 | 382 | 9 | 379 | 4.16e-41 | 149 |
MS.gene62998.t1 | MTR_5g089390 | 25.076 | 331 | 242 | 2 | 20 | 350 | 18 | 342 | 6.36e-41 | 147 |
MS.gene62998.t1 | MTR_5g069040 | 24.742 | 388 | 275 | 4 | 3 | 374 | 5 | 391 | 1.03e-40 | 148 |
MS.gene62998.t1 | MTR_6g007753 | 31.776 | 321 | 209 | 4 | 41 | 357 | 324 | 638 | 3.65e-39 | 148 |
MS.gene62998.t1 | MTR_6g007753 | 32.766 | 235 | 151 | 2 | 127 | 357 | 83 | 314 | 1.32e-28 | 117 |
MS.gene62998.t1 | MTR_4g094340 | 33.716 | 261 | 165 | 3 | 7 | 262 | 18 | 275 | 7.78e-39 | 140 |
MS.gene62998.t1 | MTR_4g094360 | 31.273 | 275 | 179 | 3 | 93 | 357 | 44 | 318 | 1.12e-38 | 142 |
MS.gene62998.t1 | MTR_6g007747 | 32.416 | 327 | 208 | 6 | 41 | 363 | 37 | 354 | 1.33e-38 | 142 |
MS.gene62998.t1 | MTR_6g007750 | 30.581 | 327 | 211 | 7 | 40 | 357 | 36 | 355 | 1.61e-38 | 142 |
MS.gene62998.t1 | MTR_4g094340 | 33.725 | 255 | 161 | 3 | 13 | 262 | 6 | 257 | 1.73e-38 | 139 |
MS.gene62998.t1 | MTR_4g129650 | 30.147 | 272 | 174 | 6 | 115 | 382 | 3 | 262 | 3.63e-38 | 138 |
MS.gene62998.t1 | MTR_4g094360 | 28.758 | 306 | 215 | 1 | 10 | 312 | 8 | 313 | 1.81e-36 | 135 |
MS.gene62998.t1 | MTR_3g095440 | 29.921 | 254 | 172 | 2 | 14 | 261 | 3 | 256 | 2.32e-36 | 133 |
MS.gene62998.t1 | MTR_6g007760 | 28.013 | 307 | 211 | 5 | 13 | 314 | 8 | 309 | 1.89e-33 | 127 |
MS.gene62998.t1 | MTR_6g007757 | 30.864 | 324 | 213 | 4 | 41 | 357 | 37 | 356 | 3.98e-33 | 127 |
MS.gene62998.t1 | MTR_6g007740 | 28.319 | 339 | 232 | 5 | 17 | 349 | 13 | 346 | 9.96e-32 | 125 |
MS.gene62998.t1 | MTR_5g034980 | 34.286 | 245 | 155 | 4 | 21 | 262 | 12 | 253 | 3.16e-31 | 120 |
MS.gene62998.t1 | MTR_2g102340 | 30.315 | 254 | 175 | 2 | 10 | 262 | 32 | 284 | 4.20e-31 | 120 |
MS.gene62998.t1 | MTR_8g006090 | 34.468 | 235 | 153 | 1 | 17 | 250 | 12 | 246 | 4.65e-31 | 120 |
MS.gene62998.t1 | MTR_1g068720 | 41.892 | 148 | 82 | 4 | 207 | 350 | 93 | 240 | 2.69e-30 | 116 |
MS.gene62998.t1 | MTR_1g068720 | 39.241 | 79 | 48 | 0 | 14 | 92 | 12 | 90 | 4.79e-11 | 62.8 |
MS.gene62998.t1 | MTR_4g094342 | 33.173 | 208 | 134 | 2 | 8 | 210 | 5 | 212 | 3.54e-29 | 114 |
MS.gene62998.t1 | MTR_4g094340 | 33.654 | 208 | 130 | 3 | 7 | 209 | 18 | 222 | 7.12e-29 | 112 |
MS.gene62998.t1 | MTR_5g012650 | 28.190 | 337 | 223 | 9 | 20 | 345 | 12 | 340 | 9.22e-28 | 112 |
MS.gene62998.t1 | MTR_4g100840 | 28.144 | 334 | 224 | 8 | 20 | 345 | 18 | 343 | 2.34e-27 | 111 |
MS.gene62998.t1 | MTR_8g006090 | 37.975 | 158 | 98 | 0 | 93 | 250 | 9 | 166 | 4.40e-24 | 99.4 |
MS.gene62998.t1 | MTR_8g076800 | 39.370 | 127 | 69 | 2 | 178 | 297 | 138 | 263 | 1.02e-19 | 88.6 |
MS.gene62998.t1 | MTR_6g007757 | 27.679 | 224 | 156 | 3 | 41 | 262 | 37 | 256 | 6.16e-19 | 86.3 |
MS.gene62998.t1 | MTR_6g007470 | 50.000 | 82 | 41 | 0 | 205 | 286 | 104 | 185 | 5.46e-18 | 82.4 |
MS.gene62998.t1 | MTR_4g094348 | 37.097 | 124 | 69 | 2 | 96 | 210 | 2 | 125 | 5.23e-16 | 75.9 |
MS.gene62998.t1 | MTR_1g014790 | 40.594 | 101 | 52 | 2 | 101 | 196 | 48 | 145 | 4.31e-15 | 73.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene62998.t1 | AT1G44800 | 64.023 | 353 | 124 | 2 | 12 | 361 | 6 | 358 | 4.15e-168 | 474 |
MS.gene62998.t1 | AT4G08300 | 64.228 | 369 | 126 | 5 | 12 | 375 | 6 | 373 | 5.35e-167 | 472 |
MS.gene62998.t1 | AT1G21890 | 60.428 | 374 | 133 | 4 | 8 | 368 | 1 | 372 | 6.32e-157 | 447 |
MS.gene62998.t1 | AT1G21890 | 63.492 | 315 | 105 | 2 | 8 | 312 | 1 | 315 | 1.55e-140 | 404 |
MS.gene62998.t1 | AT2G39510 | 54.678 | 342 | 152 | 2 | 11 | 351 | 2 | 341 | 4.09e-128 | 373 |
MS.gene62998.t1 | AT2G37460 | 52.584 | 329 | 153 | 2 | 7 | 334 | 5 | 331 | 4.22e-122 | 358 |
MS.gene62998.t1 | AT4G08290 | 47.185 | 373 | 189 | 4 | 6 | 370 | 2 | 374 | 6.13e-122 | 358 |
MS.gene62998.t1 | AT5G07050 | 49.593 | 369 | 167 | 5 | 16 | 376 | 17 | 374 | 7.06e-116 | 343 |
MS.gene62998.t1 | AT2G40900 | 44.092 | 347 | 177 | 3 | 11 | 354 | 2 | 334 | 1.60e-102 | 308 |
MS.gene62998.t1 | AT3G56620 | 47.319 | 317 | 163 | 1 | 16 | 332 | 10 | 322 | 7.87e-102 | 306 |
MS.gene62998.t1 | AT5G13670 | 43.175 | 359 | 191 | 4 | 13 | 359 | 4 | 361 | 3.38e-99 | 300 |
MS.gene62998.t1 | AT2G37450 | 47.645 | 361 | 154 | 7 | 12 | 365 | 4 | 336 | 2.06e-97 | 293 |
MS.gene62998.t1 | AT4G08290 | 45.560 | 259 | 139 | 1 | 6 | 262 | 2 | 260 | 1.89e-81 | 251 |
MS.gene62998.t1 | AT1G75500 | 39.481 | 347 | 194 | 5 | 1 | 334 | 1 | 344 | 9.67e-78 | 245 |
MS.gene62998.t1 | AT1G75500 | 39.481 | 347 | 194 | 5 | 1 | 334 | 1 | 344 | 9.67e-78 | 245 |
MS.gene62998.t1 | AT3G18200 | 35.838 | 346 | 218 | 2 | 6 | 349 | 22 | 365 | 2.31e-75 | 238 |
MS.gene62998.t1 | AT3G53210 | 39.514 | 329 | 198 | 1 | 8 | 335 | 1 | 329 | 3.14e-75 | 238 |
MS.gene62998.t1 | AT2G37450 | 48.889 | 270 | 126 | 5 | 102 | 365 | 1 | 264 | 7.46e-73 | 228 |
MS.gene62998.t1 | AT1G09380 | 34.262 | 359 | 225 | 3 | 17 | 370 | 8 | 360 | 6.43e-67 | 216 |
MS.gene62998.t1 | AT3G30340 | 35.503 | 338 | 215 | 2 | 16 | 352 | 10 | 345 | 2.21e-65 | 212 |
MS.gene62998.t1 | AT4G30420 | 33.711 | 353 | 226 | 4 | 12 | 357 | 4 | 355 | 3.90e-65 | 212 |
MS.gene62998.t1 | AT5G64700 | 35.542 | 332 | 207 | 2 | 16 | 340 | 7 | 338 | 1.55e-63 | 207 |
MS.gene62998.t1 | AT4G30420 | 33.815 | 346 | 221 | 4 | 19 | 357 | 1 | 345 | 3.04e-63 | 207 |
MS.gene62998.t1 | AT1G43650 | 36.677 | 319 | 199 | 2 | 16 | 334 | 6 | 321 | 2.91e-61 | 201 |
MS.gene62998.t1 | AT2G37450 | 47.541 | 244 | 114 | 6 | 129 | 365 | 61 | 297 | 2.27e-59 | 194 |
MS.gene62998.t1 | AT2G37450 | 51.724 | 58 | 28 | 0 | 12 | 69 | 4 | 61 | 4.83e-11 | 63.5 |
MS.gene62998.t1 | AT1G25270 | 35.734 | 361 | 213 | 2 | 15 | 373 | 1 | 344 | 5.16e-58 | 193 |
MS.gene62998.t1 | AT3G53210 | 41.393 | 244 | 142 | 1 | 93 | 335 | 29 | 272 | 2.04e-57 | 190 |
MS.gene62998.t1 | AT3G53210 | 38.462 | 260 | 159 | 1 | 8 | 266 | 1 | 260 | 2.44e-54 | 180 |
MS.gene62998.t1 | AT4G28040 | 31.534 | 352 | 219 | 6 | 12 | 360 | 3 | 335 | 2.38e-53 | 181 |
MS.gene62998.t1 | AT4G28040 | 31.534 | 352 | 219 | 6 | 12 | 360 | 3 | 335 | 2.38e-53 | 181 |
MS.gene62998.t1 | AT4G28040 | 31.534 | 352 | 219 | 6 | 12 | 360 | 3 | 335 | 2.38e-53 | 181 |
MS.gene62998.t1 | AT4G28040 | 31.534 | 352 | 219 | 6 | 12 | 360 | 3 | 335 | 2.38e-53 | 181 |
MS.gene62998.t1 | AT4G28040 | 31.534 | 352 | 219 | 6 | 12 | 360 | 3 | 335 | 2.38e-53 | 181 |
MS.gene62998.t1 | AT4G01440 | 31.164 | 292 | 201 | 0 | 42 | 333 | 35 | 326 | 1.13e-51 | 176 |
MS.gene62998.t1 | AT1G68170 | 31.720 | 372 | 240 | 4 | 6 | 370 | 2 | 366 | 5.66e-51 | 175 |
MS.gene62998.t1 | AT3G18200 | 36.170 | 235 | 148 | 1 | 115 | 349 | 3 | 235 | 5.48e-50 | 169 |
MS.gene62998.t1 | AT1G68170 | 32.231 | 363 | 232 | 4 | 15 | 370 | 1 | 356 | 1.68e-49 | 171 |
MS.gene62998.t1 | AT5G40240 | 30.088 | 339 | 217 | 8 | 13 | 339 | 16 | 346 | 1.66e-47 | 166 |
MS.gene62998.t1 | AT5G40240 | 30.088 | 339 | 217 | 8 | 13 | 339 | 16 | 346 | 1.66e-47 | 166 |
MS.gene62998.t1 | AT5G40240 | 30.088 | 339 | 217 | 8 | 13 | 339 | 30 | 360 | 2.26e-47 | 166 |
MS.gene62998.t1 | AT1G01070 | 31.548 | 336 | 215 | 6 | 10 | 335 | 6 | 336 | 1.73e-46 | 163 |
MS.gene62998.t1 | AT3G28050 | 32.486 | 354 | 225 | 8 | 13 | 360 | 8 | 353 | 1.74e-46 | 163 |
MS.gene62998.t1 | AT4G01440 | 30.657 | 274 | 190 | 0 | 42 | 315 | 35 | 308 | 2.86e-46 | 161 |
MS.gene62998.t1 | AT5G45370 | 31.832 | 333 | 206 | 4 | 20 | 349 | 23 | 337 | 1.24e-45 | 160 |
MS.gene62998.t1 | AT5G45370 | 31.412 | 347 | 213 | 6 | 20 | 349 | 23 | 361 | 2.17e-45 | 160 |
MS.gene62998.t1 | AT5G45370 | 31.412 | 347 | 213 | 6 | 20 | 349 | 23 | 361 | 2.17e-45 | 160 |
MS.gene62998.t1 | AT5G40230 | 29.586 | 338 | 220 | 6 | 13 | 339 | 17 | 347 | 8.88e-45 | 158 |
MS.gene62998.t1 | AT4G01430 | 29.129 | 333 | 230 | 4 | 42 | 370 | 34 | 364 | 7.45e-44 | 156 |
MS.gene62998.t1 | AT1G11460 | 30.178 | 338 | 221 | 7 | 8 | 334 | 1 | 334 | 5.73e-42 | 150 |
MS.gene62998.t1 | AT3G45870 | 31.902 | 326 | 208 | 4 | 16 | 329 | 11 | 334 | 5.75e-42 | 151 |
MS.gene62998.t1 | AT5G40210 | 29.799 | 349 | 209 | 9 | 20 | 357 | 16 | 339 | 3.26e-41 | 148 |
MS.gene62998.t1 | AT1G11450 | 28.280 | 343 | 232 | 3 | 10 | 345 | 9 | 344 | 8.22e-41 | 147 |
MS.gene62998.t1 | AT3G30340 | 35.426 | 223 | 143 | 1 | 41 | 262 | 35 | 257 | 8.54e-41 | 145 |
MS.gene62998.t1 | AT4G15540 | 29.480 | 346 | 224 | 5 | 13 | 353 | 13 | 343 | 1.10e-39 | 144 |
MS.gene62998.t1 | AT4G15540 | 29.480 | 346 | 224 | 5 | 13 | 353 | 13 | 343 | 1.10e-39 | 144 |
MS.gene62998.t1 | AT1G01070 | 32.394 | 284 | 180 | 5 | 59 | 335 | 11 | 289 | 4.39e-39 | 142 |
MS.gene62998.t1 | AT3G28130 | 33.591 | 259 | 165 | 4 | 100 | 355 | 10 | 264 | 1.46e-38 | 139 |
MS.gene62998.t1 | AT3G28130 | 33.591 | 259 | 165 | 4 | 100 | 355 | 10 | 264 | 1.46e-38 | 139 |
MS.gene62998.t1 | AT3G28130 | 30.294 | 340 | 228 | 6 | 20 | 355 | 16 | 350 | 3.61e-38 | 140 |
MS.gene62998.t1 | AT5G47470 | 29.819 | 332 | 216 | 5 | 21 | 345 | 34 | 355 | 3.64e-38 | 140 |
MS.gene62998.t1 | AT5G47470 | 29.819 | 332 | 216 | 5 | 21 | 345 | 62 | 383 | 5.37e-38 | 141 |
MS.gene62998.t1 | AT3G28070 | 33.071 | 254 | 164 | 4 | 100 | 349 | 8 | 259 | 6.52e-38 | 137 |
MS.gene62998.t1 | AT5G64700 | 33.202 | 253 | 162 | 2 | 16 | 261 | 7 | 259 | 6.65e-38 | 137 |
MS.gene62998.t1 | AT1G11450 | 29.085 | 306 | 203 | 3 | 47 | 345 | 2 | 300 | 1.30e-37 | 138 |
MS.gene62998.t1 | AT3G28070 | 32.727 | 275 | 178 | 5 | 79 | 349 | 80 | 351 | 1.44e-37 | 139 |
MS.gene62998.t1 | AT1G43650 | 35.772 | 246 | 155 | 2 | 16 | 261 | 6 | 248 | 3.28e-37 | 135 |
MS.gene62998.t1 | AT4G01440 | 31.222 | 221 | 152 | 0 | 42 | 262 | 35 | 255 | 5.19e-37 | 135 |
MS.gene62998.t1 | AT5G47470 | 29.573 | 328 | 214 | 5 | 21 | 341 | 62 | 379 | 8.07e-37 | 137 |
MS.gene62998.t1 | AT4G19185 | 31.024 | 332 | 213 | 4 | 18 | 334 | 22 | 352 | 2.56e-36 | 136 |
MS.gene62998.t1 | AT1G70260 | 26.420 | 352 | 244 | 4 | 14 | 357 | 9 | 353 | 5.25e-36 | 135 |
MS.gene62998.t1 | AT1G11450 | 29.195 | 298 | 197 | 3 | 55 | 345 | 3 | 293 | 7.99e-36 | 133 |
MS.gene62998.t1 | AT3G28100 | 32.075 | 265 | 175 | 4 | 73 | 334 | 71 | 333 | 1.23e-35 | 134 |
MS.gene62998.t1 | AT3G28080 | 31.273 | 275 | 174 | 6 | 73 | 339 | 71 | 338 | 3.24e-35 | 132 |
MS.gene62998.t1 | AT4G24980 | 31.373 | 306 | 134 | 6 | 31 | 331 | 1 | 235 | 4.89e-35 | 130 |
MS.gene62998.t1 | AT3G28080 | 32.377 | 244 | 159 | 4 | 100 | 339 | 8 | 249 | 5.63e-35 | 130 |
MS.gene62998.t1 | AT3G28080 | 32.377 | 244 | 159 | 4 | 100 | 339 | 8 | 249 | 5.63e-35 | 130 |
MS.gene62998.t1 | AT3G28080 | 32.377 | 244 | 159 | 4 | 100 | 339 | 8 | 249 | 5.63e-35 | 130 |
MS.gene62998.t1 | AT3G28080 | 32.377 | 244 | 159 | 4 | 100 | 339 | 8 | 249 | 5.63e-35 | 130 |
MS.gene62998.t1 | AT3G45870 | 30.744 | 309 | 200 | 4 | 16 | 312 | 11 | 317 | 2.31e-34 | 129 |
MS.gene62998.t1 | AT3G28080 | 31.599 | 269 | 169 | 6 | 79 | 339 | 69 | 330 | 4.67e-34 | 129 |
MS.gene62998.t1 | AT4G01430 | 30.182 | 275 | 188 | 3 | 42 | 312 | 34 | 308 | 6.19e-34 | 128 |
MS.gene62998.t1 | AT4G01440 | 28.704 | 216 | 154 | 0 | 118 | 333 | 3 | 218 | 4.33e-33 | 124 |
MS.gene62998.t1 | AT4G01440 | 28.704 | 216 | 154 | 0 | 118 | 333 | 3 | 218 | 4.33e-33 | 124 |
MS.gene62998.t1 | AT1G11450 | 27.419 | 310 | 211 | 3 | 10 | 312 | 9 | 311 | 5.97e-32 | 123 |
MS.gene62998.t1 | AT4G01450 | 30.743 | 296 | 201 | 1 | 42 | 337 | 35 | 326 | 9.36e-31 | 120 |
MS.gene62998.t1 | AT5G45370 | 30.712 | 267 | 160 | 6 | 100 | 349 | 1 | 259 | 1.55e-30 | 118 |
MS.gene62998.t1 | AT5G45370 | 30.712 | 267 | 160 | 6 | 100 | 349 | 1 | 259 | 1.55e-30 | 118 |
MS.gene62998.t1 | AT4G01450 | 29.520 | 271 | 187 | 1 | 42 | 312 | 35 | 301 | 4.08e-29 | 115 |
MS.gene62998.t1 | AT3G45870 | 31.179 | 263 | 167 | 4 | 16 | 267 | 11 | 270 | 1.30e-28 | 113 |
MS.gene62998.t1 | AT3G28070 | 32.766 | 235 | 151 | 5 | 82 | 312 | 83 | 314 | 2.04e-28 | 113 |
MS.gene62998.t1 | AT4G19185 | 30.859 | 256 | 161 | 4 | 94 | 334 | 20 | 274 | 3.43e-28 | 113 |
MS.gene62998.t1 | AT1G11450 | 28.295 | 258 | 171 | 3 | 95 | 345 | 2 | 252 | 4.85e-28 | 111 |
MS.gene62998.t1 | AT4G16620 | 26.786 | 336 | 223 | 6 | 25 | 348 | 20 | 344 | 5.95e-27 | 110 |
MS.gene62998.t1 | AT3G28130 | 30.131 | 229 | 153 | 4 | 130 | 355 | 1 | 225 | 1.30e-26 | 106 |
MS.gene62998.t1 | AT4G01450 | 31.401 | 207 | 138 | 1 | 42 | 248 | 35 | 237 | 2.08e-26 | 106 |
MS.gene62998.t1 | AT3G28070 | 29.464 | 224 | 152 | 4 | 130 | 349 | 1 | 222 | 9.21e-26 | 104 |
MS.gene62998.t1 | AT1G60050 | 22.841 | 359 | 265 | 5 | 8 | 355 | 4 | 361 | 6.76e-25 | 104 |
MS.gene62998.t1 | AT4G01450 | 30.556 | 216 | 143 | 2 | 42 | 257 | 35 | 243 | 1.34e-24 | 101 |
MS.gene62998.t1 | AT3G45870 | 32.075 | 212 | 132 | 3 | 129 | 329 | 49 | 259 | 7.70e-24 | 100 |
MS.gene62998.t1 | AT5G45370 | 30.932 | 236 | 138 | 6 | 131 | 349 | 74 | 301 | 1.03e-23 | 100 |
MS.gene62998.t1 | AT3G28080 | 29.439 | 214 | 145 | 4 | 130 | 339 | 1 | 212 | 1.62e-23 | 98.2 |
MS.gene62998.t1 | AT4G16620 | 28.352 | 261 | 159 | 5 | 102 | 348 | 1 | 247 | 2.19e-20 | 90.1 |
MS.gene62998.t1 | AT4G16620 | 28.352 | 261 | 159 | 5 | 102 | 348 | 1 | 247 | 2.19e-20 | 90.1 |
MS.gene62998.t1 | AT4G01430 | 25.328 | 229 | 166 | 3 | 145 | 370 | 1 | 227 | 1.80e-19 | 86.7 |
MS.gene62998.t1 | AT3G28100 | 32.984 | 191 | 124 | 3 | 73 | 260 | 71 | 260 | 2.29e-19 | 87.4 |
MS.gene62998.t1 | AT3G28130 | 28.514 | 249 | 172 | 5 | 20 | 264 | 16 | 262 | 1.77e-18 | 84.7 |
MS.gene62998.t1 | AT3G45870 | 31.351 | 185 | 113 | 4 | 157 | 329 | 1 | 183 | 7.62e-17 | 79.7 |
MS.gene62998.t1 | AT3G45870 | 30.256 | 195 | 124 | 3 | 129 | 312 | 49 | 242 | 1.04e-16 | 79.3 |
MS.gene62998.t1 | AT3G45870 | 30.256 | 195 | 124 | 3 | 129 | 312 | 49 | 242 | 1.04e-16 | 79.3 |
MS.gene62998.t1 | AT3G28100 | 35.862 | 145 | 91 | 2 | 20 | 163 | 17 | 160 | 1.43e-16 | 79.3 |
MS.gene62998.t1 | AT3G28130 | 35.172 | 145 | 92 | 2 | 20 | 163 | 16 | 159 | 2.19e-15 | 75.1 |
MS.gene62998.t1 | AT4G16620 | 26.549 | 226 | 145 | 4 | 25 | 242 | 20 | 232 | 4.82e-15 | 75.1 |
MS.gene62998.t1 | AT3G28080 | 41.053 | 95 | 47 | 2 | 73 | 163 | 71 | 160 | 2.70e-14 | 73.2 |
MS.gene62998.t1 | AT3G28080 | 50.000 | 64 | 32 | 0 | 100 | 163 | 8 | 71 | 1.15e-13 | 70.1 |
MS.gene62998.t1 | AT3G45870 | 32.000 | 150 | 88 | 4 | 129 | 267 | 49 | 195 | 8.18e-11 | 61.6 |
MS.gene62998.t1 | AT3G45870 | 31.757 | 148 | 87 | 4 | 131 | 267 | 4 | 148 | 8.88e-11 | 60.5 |
Find 72 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCTGCCTTTCAGCTCATTA+AGG | 0.222293 | 1.3:-16350753 | MS.gene62998:CDS |
TATGTGATTTGTAGTATTAT+TGG | 0.237802 | 1.3:-16349273 | MS.gene62998:intron |
GCAATGGTGTCCCTTCAATT+TGG | 0.283577 | 1.3:-16354457 | MS.gene62998:CDS |
CCTGCAACCTTCATGTCTTT+AGG | 0.289868 | 1.3:+16349090 | None:intergenic |
CTTGGCTGAGCAAACACATT+TGG | 0.291180 | 1.3:-16349850 | MS.gene62998:CDS |
TGTTATTGCTACTATCTTCA+TGG | 0.306058 | 1.3:-16354356 | MS.gene62998:CDS |
TGCATTGGGTTCCATTGTCT+TGG | 0.358630 | 1.3:-16349868 | MS.gene62998:CDS |
TGAACGTGACTTTAGTGTTT+GGG | 0.365222 | 1.3:-16350127 | MS.gene62998:CDS |
CATTTCTAGTTGTGGTGGTT+GGG | 0.370970 | 1.3:-16350654 | MS.gene62998:CDS |
TTGGCTGAGCAAACACATTT+GGG | 0.381347 | 1.3:-16349849 | MS.gene62998:CDS |
GGGACAAGAATTGCCAATTA+AGG | 0.385958 | 1.3:-16349163 | MS.gene62998:CDS |
TCAAGCATGGCATGAGTCAT+TGG | 0.386320 | 1.3:-16354399 | MS.gene62998:CDS |
TCATTTCTAGTTGTGGTGGT+TGG | 0.392002 | 1.3:-16350655 | MS.gene62998:CDS |
GGAACAGTAGTAACTGTATC+AGG | 0.395672 | 1.3:-16350803 | MS.gene62998:CDS |
CCTGCCTTTCAGCTCATTAA+GGG | 0.396600 | 1.3:-16350752 | MS.gene62998:CDS |
TTGAACGTGACTTTAGTGTT+TGG | 0.397847 | 1.3:-16350128 | MS.gene62998:CDS |
CTTTCAAGGACAAGGGCAAA+AGG | 0.400883 | 1.3:+16354331 | None:intergenic |
CCTAAAGACATGAAGGTTGC+AGG | 0.403054 | 1.3:-16349090 | MS.gene62998:CDS |
TGATCAAAATTTGTACAACT+TGG | 0.403759 | 1.3:-16351769 | MS.gene62998:CDS |
CTGTGGTTCCACTTTCATGT+TGG | 0.408966 | 1.3:+16350717 | None:intergenic |
TCCCTTCAATTTGGCTATGC+AGG | 0.412527 | 1.3:-16354448 | MS.gene62998:CDS |
GCCATTATAAAAGTAATTGC+TGG | 0.415249 | 1.3:+16351696 | None:intergenic |
AAGATAGGGAGTGTCATCTT+TGG | 0.425008 | 1.3:+16353994 | None:intergenic |
GCTGTCATTGAGAGCTCTGC+TGG | 0.436240 | 1.3:+16350201 | None:intergenic |
GTGGACTTTACACTGTGGTA+TGG | 0.458143 | 1.3:-16349233 | MS.gene62998:CDS |
CACAGCATAGCAAAGGTAGT+TGG | 0.473288 | 1.3:-16350824 | MS.gene62998:CDS |
GACTTTAGTGTTTGGGCCAT+AGG | 0.473445 | 1.3:-16350120 | MS.gene62998:CDS |
ATGATTATCACAGCTGCATT+GGG | 0.474250 | 1.3:-16349882 | MS.gene62998:CDS |
GATCAAAATTTGTACAACTT+GGG | 0.474402 | 1.3:-16351768 | MS.gene62998:CDS |
CCCTTAATGAGCTGAAAGGC+AGG | 0.478252 | 1.3:+16350752 | None:intergenic |
ACTGAACAAAACTTTGTGCT+TGG | 0.480298 | 1.3:-16350689 | MS.gene62998:CDS |
GTGTAGGGTATTGTGTGCTC+TGG | 0.480558 | 1.3:-16349981 | MS.gene62998:intron |
AGGGACACCATTGCAAGATA+AGG | 0.486235 | 1.3:+16354466 | None:intergenic |
TGGACTTTACACTGTGGTAT+GGG | 0.488035 | 1.3:-16349232 | MS.gene62998:CDS |
AGGAATGTACATCATCACTA+TGG | 0.493698 | 1.3:-16354428 | MS.gene62998:CDS |
CAAGCATGGCATGAGTCATT+GGG | 0.496739 | 1.3:-16354398 | MS.gene62998:CDS |
TATGATTATCACAGCTGCAT+TGG | 0.497229 | 1.3:-16349883 | MS.gene62998:CDS |
ATAAGAATAAGGACCTTTCA+AGG | 0.497308 | 1.3:+16354317 | None:intergenic |
TTTCAAGGACAAGGGCAAAA+GGG | 0.505194 | 1.3:+16354332 | None:intergenic |
CAGAGCTCTCAATGACAGCT+TGG | 0.513750 | 1.3:-16350197 | MS.gene62998:CDS |
GCATCAAACCAACATGAAAG+TGG | 0.515414 | 1.3:-16350725 | MS.gene62998:CDS |
ATAATGCTCATTTCTAGTTG+TGG | 0.520470 | 1.3:-16350662 | MS.gene62998:CDS |
AAGCCTAGAGTCAAAACCTA+TGG | 0.533899 | 1.3:+16350104 | None:intergenic |
TTCCTGCATAGCCAAATTGA+AGG | 0.538757 | 1.3:+16354446 | None:intergenic |
GGGTATTGTGTGCTCTGGAA+TGG | 0.539911 | 1.3:-16349976 | MS.gene62998:CDS |
AATTAAGCCTTATCTTGCAA+TGG | 0.543737 | 1.3:-16354473 | MS.gene62998:CDS |
GCTGTGATAATCATACATAA+AGG | 0.548433 | 1.3:+16349891 | None:intergenic |
TACATGTGATAAAATGAGCA+AGG | 0.562709 | 1.3:-16354506 | MS.gene62998:CDS |
TTCAAGGACAAGGGCAAAAG+GGG | 0.564613 | 1.3:+16354333 | None:intergenic |
ATGCTCATTTCTAGTTGTGG+TGG | 0.566861 | 1.3:-16350659 | MS.gene62998:CDS |
CAATGTTCCTAAAGACATGA+AGG | 0.571420 | 1.3:-16349097 | MS.gene62998:CDS |
ACATGTGATAAAATGAGCAA+GGG | 0.585830 | 1.3:-16354505 | MS.gene62998:CDS |
AGTAACTGTATCAGGAGCAA+TGG | 0.589876 | 1.3:-16350795 | MS.gene62998:CDS |
ATAAGGACCTTTCAAGGACA+AGG | 0.597920 | 1.3:+16354323 | None:intergenic |
CTGAGCAAACACATTTGGGA+AGG | 0.601166 | 1.3:-16349845 | MS.gene62998:intron |
CTGAAAGAAGTAACAAACAC+AGG | 0.602049 | 1.3:+16349915 | None:intergenic |
ACTATGGTTTCATTCAAGCA+TGG | 0.607324 | 1.3:-16354412 | MS.gene62998:CDS |
CTGTCATTGAGAGCTCTGCT+GGG | 0.614090 | 1.3:+16350202 | None:intergenic |
GGAATGGCATACTATGTACA+AGG | 0.615820 | 1.3:-16349960 | MS.gene62998:CDS |
TCCTGCATAGCCAAATTGAA+GGG | 0.627407 | 1.3:+16354447 | None:intergenic |
TGTTTGCTCAGCCAAGACAA+TGG | 0.640719 | 1.3:+16349857 | None:intergenic |
CATGTGATAAAATGAGCAAG+GGG | 0.645528 | 1.3:-16354504 | MS.gene62998:CDS |
GGAGCTATTATCATTGTGTG+TGG | 0.654450 | 1.3:-16349252 | MS.gene62998:CDS |
TTGTCCCTTAATGAGCTGAA+AGG | 0.668147 | 1.3:+16350748 | None:intergenic |
TAAGGACCTTTCAAGGACAA+GGG | 0.675370 | 1.3:+16354324 | None:intergenic |
GGACTTTACACTGTGGTATG+GGG | 0.678746 | 1.3:-16349231 | MS.gene62998:CDS |
ATGGTTATGACATTGTACAA+AGG | 0.682484 | 1.3:-16350776 | MS.gene62998:CDS |
TGAAAGAAGTAACAAACACA+GGG | 0.687053 | 1.3:+16349916 | None:intergenic |
AGATAGTAGCAATAACATGA+CGG | 0.699679 | 1.3:+16354362 | None:intergenic |
TGCTGGCAGAATGTTAACAG+TGG | 0.708042 | 1.3:+16351713 | None:intergenic |
GGAGTTGTGACAAGAGAACG+TGG | 0.714077 | 1.3:-16349939 | MS.gene62998:CDS |
TGTGTGTGGACTTTACACTG+TGG | 0.796484 | 1.3:-16349238 | MS.gene62998:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAACAAAAAATAAAATTTCA+AGG | - | chr1.3:16352576-16352595 | MS.gene62998:intron | 10.0% |
!! | AGTTTAATTAAGATAATTAA+TGG | + | chr1.3:16353542-16353561 | None:intergenic | 10.0% |
!! | TTCCATTATAATTAATATTA+TGG | + | chr1.3:16351953-16351972 | None:intergenic | 10.0% |
!!! | ACTCTTTAATTTTAATTATT+TGG | + | chr1.3:16350516-16350535 | None:intergenic | 10.0% |
!!! | AGACATATAATATTATTTTA+TGG | - | chr1.3:16350175-16350194 | MS.gene62998:CDS | 10.0% |
!!! | AGTCATATTAAAATATTTTT+GGG | - | chr1.3:16351311-16351330 | MS.gene62998:intron | 10.0% |
!!! | GTTCTATTAATATATTTTTT+AGG | + | chr1.3:16351390-16351409 | None:intergenic | 10.0% |
!!! | GTTTTTAAAATCAATTAAAA+TGG | + | chr1.3:16350014-16350033 | None:intergenic | 10.0% |
!!! | TAAAAAAAATTAACTTTTTG+AGG | - | chr1.3:16349482-16349501 | MS.gene62998:intron | 10.0% |
!!! | TAATTTAATTTGTTTTAAAC+AGG | - | chr1.3:16351785-16351804 | MS.gene62998:intron | 10.0% |
!!! | TCAAAAAAATATAAGATTTT+AGG | - | chr1.3:16351081-16351100 | MS.gene62998:intron | 10.0% |
!! | AATAATACTATGAAACTAAA+AGG | + | chr1.3:16350864-16350883 | None:intergenic | 15.0% |
!! | AATATAAACAAACAAAATGT+AGG | + | chr1.3:16349708-16349727 | None:intergenic | 15.0% |
!! | AGAATATAGTGATAATTAAA+TGG | + | chr1.3:16349671-16349690 | None:intergenic | 15.0% |
!! | ATTATTCTTAATGAATACAT+AGG | + | chr1.3:16350989-16351008 | None:intergenic | 15.0% |
!! | CACCATAATATTAATTATAA+TGG | - | chr1.3:16351948-16351967 | MS.gene62998:intron | 15.0% |
!! | TTAATTATCACTATATTCTT+GGG | - | chr1.3:16349672-16349691 | MS.gene62998:intron | 15.0% |
!! | TTATCTTTAATTATTGTAAG+TGG | + | chr1.3:16354147-16354166 | None:intergenic | 15.0% |
!! | TTTAATTATCACTATATTCT+TGG | - | chr1.3:16349671-16349690 | MS.gene62998:intron | 15.0% |
!! | TTTCATAGTATTATTAAGAA+AGG | - | chr1.3:16350869-16350888 | MS.gene62998:intron | 15.0% |
!!! | AATTTAGTACTACATTTTTT+TGG | - | chr1.3:16351447-16351466 | MS.gene62998:intron | 15.0% |
!!! | ACTTGTATGATTTTTTTTTA+AGG | - | chr1.3:16351711-16351730 | MS.gene62998:CDS | 15.0% |
!!! | ATTTCATATAGTTTTAACAA+GGG | + | chr1.3:16349752-16349771 | None:intergenic | 15.0% |
!!! | GAGTCATATTAAAATATTTT+TGG | - | chr1.3:16351310-16351329 | MS.gene62998:intron | 15.0% |
!!! | TATTTCATATAGTTTTAACA+AGG | + | chr1.3:16349753-16349772 | None:intergenic | 15.0% |
!!! | TCTTTAAATGTGTATTTTAT+TGG | - | chr1.3:16352237-16352256 | MS.gene62998:intron | 15.0% |
!!! | TGAATATAAATAAAGTGTTA+GGG | + | chr1.3:16353011-16353030 | None:intergenic | 15.0% |
!!! | TGATAAAATTTCGTATTTTA+AGG | + | chr1.3:16350212-16350231 | None:intergenic | 15.0% |
!!! | TTATTTTCATAGATTTTGTT+TGG | - | chr1.3:16351664-16351683 | MS.gene62998:intron | 15.0% |
!! | AAATGTAGTACTAAATTATG+AGG | + | chr1.3:16351444-16351463 | None:intergenic | 20.0% |
!! | ACTAACAATTAAAACCATTA+AGG | - | chr1.3:16353559-16353578 | MS.gene62998:intron | 20.0% |
!! | ATAATCAAGTAGTAAGTTTA+TGG | + | chr1.3:16353858-16353877 | None:intergenic | 20.0% |
!! | ATATAGTGATAATTAAATGG+AGG | + | chr1.3:16349668-16349687 | None:intergenic | 20.0% |
!! | ATTCAAATTGAAAATTGAAG+GGG | + | chr1.3:16353800-16353819 | None:intergenic | 20.0% |
!! | CATTCAAATTGAAAATTGAA+GGG | + | chr1.3:16353801-16353820 | None:intergenic | 20.0% |
!! | GTGTTTAACATTAATATTGT+CGG | + | chr1.3:16350754-16350773 | None:intergenic | 20.0% |
!! | TAATGATAATACAAATCTGT+AGG | + | chr1.3:16350832-16350851 | None:intergenic | 20.0% |
!! | TAGTTATCACTTATAAAGTA+AGG | + | chr1.3:16351640-16351659 | None:intergenic | 20.0% |
!! | TATATGTCAAGATATATACA+TGG | + | chr1.3:16349926-16349945 | None:intergenic | 20.0% |
!! | TCATTCAAATTGAAAATTGA+AGG | + | chr1.3:16353802-16353821 | None:intergenic | 20.0% |
!! | TCTATATAACAAAAAGAACT+TGG | - | chr1.3:16350940-16350959 | MS.gene62998:intron | 20.0% |
!! | TCTTCTTTAACAGAAAAATT+AGG | - | chr1.3:16349568-16349587 | MS.gene62998:intron | 20.0% |
!! | TTATTAGATTAAAGAGAATG+AGG | - | chr1.3:16354189-16354208 | MS.gene62998:intron | 20.0% |
!!! | ATAAAAAAGTATAGTGACAA+TGG | - | chr1.3:16353114-16353133 | MS.gene62998:intron | 20.0% |
!!! | ATCAATAAGCTTTATGTAAA+AGG | - | chr1.3:16350399-16350418 | MS.gene62998:intron | 20.0% |
!!! | ATGCACTTTCAATATATTTT+TGG | + | chr1.3:16352028-16352047 | None:intergenic | 20.0% |
!!! | CAGATATTTTTCAAGATTTT+TGG | - | chr1.3:16353029-16353048 | MS.gene62998:intron | 20.0% |
!!! | CTGAATATAAATAAAGTGTT+AGG | + | chr1.3:16353012-16353031 | None:intergenic | 20.0% |
!!! | GATTTTGTTGATTATTTTTG+TGG | + | chr1.3:16350698-16350717 | None:intergenic | 20.0% |
!!! | TAAAAAAAAGTATAGTGATG+AGG | + | chr1.3:16349297-16349316 | None:intergenic | 20.0% |
!!! | TATGCTACTTTGAATTTTTA+AGG | + | chr1.3:16354243-16354262 | None:intergenic | 20.0% |
!!! | TATGTGATTTGTAGTATTAT+TGG | - | chr1.3:16354312-16354331 | MS.gene62998:intron | 20.0% |
!!! | TTAGCAACATATTTGAATTT+TGG | + | chr1.3:16354280-16354299 | None:intergenic | 20.0% |
!!! | TTTTCATTTAAATGAGCTAA+GGG | + | chr1.3:16352084-16352103 | None:intergenic | 20.0% |
!!! | TTTTTCATTTAAATGAGCTA+AGG | + | chr1.3:16352085-16352104 | None:intergenic | 20.0% |
! | AAAAAAGCTAGTTGCATTTA+TGG | - | chr1.3:16351995-16352014 | MS.gene62998:intron | 25.0% |
! | AACAATTAAAACCATTAAGG+TGG | - | chr1.3:16353562-16353581 | MS.gene62998:intron | 25.0% |
! | AATACTATGAAACTAAAAGG+TGG | + | chr1.3:16350861-16350880 | None:intergenic | 25.0% |
! | ACAAGAAACCATTAAATCAA+TGG | - | chr1.3:16353300-16353319 | MS.gene62998:intron | 25.0% |
! | ACTCCTCAATTTATAATATC+TGG | - | chr1.3:16354079-16354098 | MS.gene62998:intron | 25.0% |
! | AGTTATCTTCTAGACTTAAT+AGG | - | chr1.3:16352382-16352401 | MS.gene62998:intron | 25.0% |
! | ATCAAAATCCTTGTCTAATT+AGG | - | chr1.3:16350092-16350111 | MS.gene62998:CDS | 25.0% |
! | ATGAATTTGAAGACAAATCA+TGG | - | chr1.3:16352321-16352340 | MS.gene62998:intron | 25.0% |
! | ATTAAGGATAGTACAAAAAC+AGG | - | chr1.3:16354438-16354457 | MS.gene62998:CDS | 25.0% |
! | ATTCATCATATGAACACATA+AGG | + | chr1.3:16351200-16351219 | None:intergenic | 25.0% |
! | ATTTAATCATGAAGCTCATT+CGG | + | chr1.3:16350123-16350142 | None:intergenic | 25.0% |
! | GAGATCATAGTTATGTATTT+GGG | - | chr1.3:16350421-16350440 | MS.gene62998:intron | 25.0% |
! | GATCAAAATTTGTACAACTT+GGG | - | chr1.3:16351817-16351836 | MS.gene62998:intron | 25.0% |
! | GCATGTGAAAAAACATTATT+TGG | - | chr1.3:16349445-16349464 | MS.gene62998:intron | 25.0% |
! | TAATACAAATCTGTAGGATA+TGG | + | chr1.3:16350826-16350845 | None:intergenic | 25.0% |
! | TAATCCATAATCTCCAAATT+GGG | - | chr1.3:16350550-16350569 | MS.gene62998:intron | 25.0% |
! | TATAGTACGAACTATATTTG+AGG | - | chr1.3:16351476-16351495 | MS.gene62998:intron | 25.0% |
! | TCCTATAAAAATCTAACTTG+AGG | + | chr1.3:16352277-16352296 | None:intergenic | 25.0% |
! | TGATCAAAATTTGTACAACT+TGG | - | chr1.3:16351816-16351835 | MS.gene62998:intron | 25.0% |
! | TTAACATTAATATTGTCGGT+GGG | + | chr1.3:16350750-16350769 | None:intergenic | 25.0% |
! | TTAAGGATAGTACAAAAACA+GGG | - | chr1.3:16354439-16354458 | MS.gene62998:CDS | 25.0% |
! | TTTAACATTAATATTGTCGG+TGG | + | chr1.3:16350751-16350770 | None:intergenic | 25.0% |
! | TTTAAGGAATTGACATTACA+TGG | + | chr1.3:16354227-16354246 | None:intergenic | 25.0% |
! | TTTGTGATTTATTTGAATGC+AGG | - | chr1.3:16352711-16352730 | MS.gene62998:intron | 25.0% |
!! | AGGATTCGTTACTTTAATTT+CGG | - | chr1.3:16351496-16351515 | MS.gene62998:intron | 25.0% |
!! | ATCAACTTATTGTGTTTTGT+TGG | - | chr1.3:16349544-16349563 | MS.gene62998:intron | 25.0% |
!! | ATGTATTTGGGATTAACTTT+GGG | - | chr1.3:16350433-16350452 | MS.gene62998:intron | 25.0% |
!! | CCTAGTATTTTATTAGATCA+CGG | - | chr1.3:16350303-16350322 | MS.gene62998:intron | 25.0% |
!! | GATTCTGATAGTTTGAAATT+TGG | + | chr1.3:16352681-16352700 | None:intergenic | 25.0% |
!! | GGAGTGAATAATCAAAATTT+TGG | - | chr1.3:16352058-16352077 | MS.gene62998:intron | 25.0% |
!! | GTTTTTAAACGTCTTTTCAT+AGG | + | chr1.3:16351288-16351307 | None:intergenic | 25.0% |
!! | GTTTTTGTACTATCCTTAAT+TGG | + | chr1.3:16354438-16354457 | None:intergenic | 25.0% |
!! | TAATTATAATGGAAGTGTGT+GGG | - | chr1.3:16351959-16351978 | MS.gene62998:intron | 25.0% |
!! | TATGTATTTGGGATTAACTT+TGG | - | chr1.3:16350432-16350451 | MS.gene62998:intron | 25.0% |
!! | TCCTCAAGTTAGATTTTTAT+AGG | - | chr1.3:16352273-16352292 | MS.gene62998:intron | 25.0% |
!! | TTAATTATAATGGAAGTGTG+TGG | - | chr1.3:16351958-16351977 | MS.gene62998:intron | 25.0% |
!! | TTATAATGGCAATCATTTTC+AGG | - | chr1.3:16351902-16351921 | MS.gene62998:intron | 25.0% |
!!! | AATTTCGTATTTTAAGGAGT+TGG | + | chr1.3:16350206-16350225 | None:intergenic | 25.0% |
!!! | AGACATTTTTGAAAGTATTG+AGG | - | chr1.3:16354464-16354483 | MS.gene62998:CDS | 25.0% |
!!! | CACATTTTCCATTGATTTAA+TGG | + | chr1.3:16353311-16353330 | None:intergenic | 25.0% |
!!! | GATAAAAGTGTCGTTTTTTA+AGG | - | chr1.3:16351037-16351056 | MS.gene62998:intron | 25.0% |
!!! | TGTTTTGTCACTTTTTGATT+GGG | + | chr1.3:16354105-16354124 | None:intergenic | 25.0% |
!!! | TTGTTGATTATTTTTGTGGT+GGG | + | chr1.3:16350694-16350713 | None:intergenic | 25.0% |
!!! | TTGTTTTGTCACTTTTTGAT+TGG | + | chr1.3:16354106-16354125 | None:intergenic | 25.0% |
!!! | TTTGTTGATTATTTTTGTGG+TGG | + | chr1.3:16350695-16350714 | None:intergenic | 25.0% |
AAAAATTCACAGCATAGCAA+AGG | - | chr1.3:16352754-16352773 | MS.gene62998:intron | 30.0% | |
AATAAAGGAGTCCAAAGATA+AGG | - | chr1.3:16350067-16350086 | MS.gene62998:intron | 30.0% | |
ACATGTGATAAAATGAGCAA+GGG | - | chr1.3:16349080-16349099 | MS.gene62998:CDS | 30.0% | |
ACCATTAAGGTGGTTAATTA+AGG | - | chr1.3:16353572-16353591 | MS.gene62998:intron | 30.0% | |
AGATAGTAGCAATAACATGA+CGG | + | chr1.3:16349226-16349245 | None:intergenic | 30.0% | |
ATAAGAATAAGGACCTTTCA+AGG | + | chr1.3:16349271-16349290 | None:intergenic | 30.0% | |
ATATACGACACTGATATGTA+TGG | - | chr1.3:16353937-16353956 | MS.gene62998:intron | 30.0% | |
ATCAAGTAGTAAGTTTATGG+TGG | + | chr1.3:16353855-16353874 | None:intergenic | 30.0% | |
ATCTATCATCAACCCAAATT+AGG | - | chr1.3:16351579-16351598 | MS.gene62998:intron | 30.0% | |
ATGGTTATGACATTGTACAA+AGG | - | chr1.3:16352809-16352828 | MS.gene62998:intron | 30.0% | |
CCAATAGTAACATGACAAAA+TGG | + | chr1.3:16353978-16353997 | None:intergenic | 30.0% | |
CCGTGATCTAATAAAATACT+AGG | + | chr1.3:16350306-16350325 | None:intergenic | 30.0% | |
GATCAAACTACATGTCTTTA+GGG | - | chr1.3:16353820-16353839 | MS.gene62998:intron | 30.0% | |
GCCATTATAAAAGTAATTGC+TGG | + | chr1.3:16351892-16351911 | None:intergenic | 30.0% | |
GCTGTGATAATCATACATAA+AGG | + | chr1.3:16353697-16353716 | None:intergenic | 30.0% | |
GGAGATCATAGTTATGTATT+TGG | - | chr1.3:16350420-16350439 | MS.gene62998:intron | 30.0% | |
GTAATCCATAATCTCCAAAT+TGG | - | chr1.3:16350549-16350568 | MS.gene62998:intron | 30.0% | |
TACATGTGATAAAATGAGCA+AGG | - | chr1.3:16349079-16349098 | MS.gene62998:CDS | 30.0% | |
TCAACCCAAATTAGGAAATT+AGG | - | chr1.3:16351587-16351606 | MS.gene62998:intron | 30.0% | |
TCAAGTAGTAAGTTTATGGT+GGG | + | chr1.3:16353854-16353873 | None:intergenic | 30.0% | |
TCCTTAATTAACCACCTTAA+TGG | + | chr1.3:16353576-16353595 | None:intergenic | 30.0% | |
TGAAAGAAGTAACAAACACA+GGG | + | chr1.3:16353672-16353691 | None:intergenic | 30.0% | |
TGATCAAACTACATGTCTTT+AGG | - | chr1.3:16353819-16353838 | MS.gene62998:intron | 30.0% | |
TGATGAGGTAGATAAGAATA+AGG | + | chr1.3:16349282-16349301 | None:intergenic | 30.0% | |
TGTGCCTAATTTCCTAATTT+GGG | + | chr1.3:16351594-16351613 | None:intergenic | 30.0% | |
TGTTATTGCTACTATCTTCA+TGG | - | chr1.3:16349229-16349248 | MS.gene62998:CDS | 30.0% | |
! | AATTAAGCCTTATCTTGCAA+TGG | - | chr1.3:16349112-16349131 | MS.gene62998:CDS | 30.0% |
! | ACATGTGTTATTAGTTGTGA+AGG | + | chr1.3:16349407-16349426 | None:intergenic | 30.0% |
! | ATAAAGTGTTAGGGTATGTA+TGG | + | chr1.3:16353002-16353021 | None:intergenic | 30.0% |
! | CATGTGTTATTAGTTGTGAA+GGG | + | chr1.3:16349406-16349425 | None:intergenic | 30.0% |
! | CCATTTTGTCATGTTACTAT+TGG | - | chr1.3:16353975-16353994 | MS.gene62998:CDS | 30.0% |
! | GGATTTTATGTAGTAGTAGT+AGG | - | chr1.3:16353050-16353069 | MS.gene62998:intron | 30.0% |
! | TAAACGTCTTTTCATAGGAT+AGG | + | chr1.3:16351283-16351302 | None:intergenic | 30.0% |
! | TCGTTACTTTAATTTCGGAT+GGG | - | chr1.3:16351501-16351520 | MS.gene62998:intron | 30.0% |
! | TTCGTTACTTTAATTTCGGA+TGG | - | chr1.3:16351500-16351519 | MS.gene62998:intron | 30.0% |
!! | ATAATGCTCATTTCTAGTTG+TGG | - | chr1.3:16352923-16352942 | MS.gene62998:intron | 30.0% |
!! | CTAAAACGTTTTAGTAACGA+TGG | + | chr1.3:16353144-16353163 | None:intergenic | 30.0% |
!! | GATTTTGATGACCTTATCTT+TGG | + | chr1.3:16350081-16350100 | None:intergenic | 30.0% |
!! | GCCAGCAATTACTTTTATAA+TGG | - | chr1.3:16351888-16351907 | MS.gene62998:intron | 30.0% |
!! | TACAAATTTTGATCAAGCAC+TGG | + | chr1.3:16351811-16351830 | None:intergenic | 30.0% |
AACATGTTGAGACTTCACTA+GGG | - | chr1.3:16349326-16349345 | MS.gene62998:intron | 35.0% | |
AATTGATGCACCAAAAAGTG+AGG | - | chr1.3:16354401-16354420 | MS.gene62998:CDS | 35.0% | |
ACAACTTCGTAAGCATATGT+GGG | - | chr1.3:16350264-16350283 | MS.gene62998:intron | 35.0% | |
ACTATGGTTTCATTCAAGCA+TGG | - | chr1.3:16349173-16349192 | MS.gene62998:CDS | 35.0% | |
ACTGAACAAAACTTTGTGCT+TGG | - | chr1.3:16352896-16352915 | MS.gene62998:intron | 35.0% | |
AGAGTGTGTATAAGCCATAA+AGG | + | chr1.3:16349792-16349811 | None:intergenic | 35.0% | |
AGATAGTCTCAACATGTCAT+TGG | + | chr1.3:16349368-16349387 | None:intergenic | 35.0% | |
AGCTAGTATCTATCATGTTG+AGG | + | chr1.3:16349860-16349879 | None:intergenic | 35.0% | |
AGGAATGTACATCATCACTA+TGG | - | chr1.3:16349157-16349176 | MS.gene62998:CDS | 35.0% | |
ATGATTATCACAGCTGCATT+GGG | - | chr1.3:16353703-16353722 | MS.gene62998:intron | 35.0% | |
ATTAAGGAGTTGTGATGTGT+AGG | - | chr1.3:16353588-16353607 | MS.gene62998:intron | 35.0% | |
ATTGATGCACCAAAAAGTGA+GGG | - | chr1.3:16354402-16354421 | MS.gene62998:CDS | 35.0% | |
CAATGTTCCTAAAGACATGA+AGG | - | chr1.3:16354488-16354507 | MS.gene62998:CDS | 35.0% | |
CATCAAAGCTAGAAACTCTA+AGG | - | chr1.3:16351555-16351574 | MS.gene62998:intron | 35.0% | |
CATGTGATAAAATGAGCAAG+GGG | - | chr1.3:16349081-16349100 | MS.gene62998:CDS | 35.0% | |
CATTATCACTCAACTATGCT+TGG | - | chr1.3:16349826-16349845 | MS.gene62998:intron | 35.0% | |
CTAAAACGTTTCAGTAACGA+TGG | + | chr1.3:16353224-16353243 | None:intergenic | 35.0% | |
CTGAAAGAAGTAACAAACAC+AGG | + | chr1.3:16353673-16353692 | None:intergenic | 35.0% | |
GGGCCAGATATTATAAATTG+AGG | + | chr1.3:16354085-16354104 | None:intergenic | 35.0% | |
GTGAAAGACTGAAATTCACA+AGG | + | chr1.3:16353351-16353370 | None:intergenic | 35.0% | |
GTGAAGTCTCAACATGTTAT+TGG | + | chr1.3:16349324-16349343 | None:intergenic | 35.0% | |
GTGATAATTAAATGGAGGAG+AGG | + | chr1.3:16349663-16349682 | None:intergenic | 35.0% | |
GTGTGCCTAATTTCCTAATT+TGG | + | chr1.3:16351595-16351614 | None:intergenic | 35.0% | |
GTTATTAGTTGTGAAGGGTT+TGG | + | chr1.3:16349401-16349420 | None:intergenic | 35.0% | |
GTTCAAGACATGTGAAACAA+AGG | + | chr1.3:16354043-16354062 | None:intergenic | 35.0% | |
GTTGAGACTATCTTTGGTTA+AGG | - | chr1.3:16349375-16349394 | MS.gene62998:intron | 35.0% | |
TAACATGTTGAGACTTCACT+AGG | - | chr1.3:16349325-16349344 | MS.gene62998:intron | 35.0% | |
TATGATTATCACAGCTGCAT+TGG | - | chr1.3:16353702-16353721 | MS.gene62998:intron | 35.0% | |
TGAACGTGACTTTAGTGTTT+GGG | - | chr1.3:16353458-16353477 | MS.gene62998:intron | 35.0% | |
TGACATGTTGAGACTATCTT+TGG | - | chr1.3:16349369-16349388 | MS.gene62998:intron | 35.0% | |
TGCTTACGAAGTTGTCAAAA+TGG | + | chr1.3:16350259-16350278 | None:intergenic | 35.0% | |
TGCTTGCTCTAGTAACTAAT+TGG | - | chr1.3:16350465-16350484 | MS.gene62998:intron | 35.0% | |
TTAAGGAGTTGTGATGTGTA+GGG | - | chr1.3:16353589-16353608 | MS.gene62998:intron | 35.0% | |
TTAGTTTCATGTCTCTTCGT+GGG | - | chr1.3:16349726-16349745 | MS.gene62998:intron | 35.0% | |
TTCTCCCAATTTGGAGATTA+TGG | + | chr1.3:16350557-16350576 | None:intergenic | 35.0% | |
TTGAACGTGACTTTAGTGTT+TGG | - | chr1.3:16353457-16353476 | MS.gene62998:intron | 35.0% | |
! | ATTAGTTTCATGTCTCTTCG+TGG | - | chr1.3:16349725-16349744 | MS.gene62998:intron | 35.0% |
! | TGAAAGTGCATTGTAGTTGA+TGG | - | chr1.3:16352037-16352056 | MS.gene62998:intron | 35.0% |
! | TTTCTAGTGGACACATCATA+TGG | - | chr1.3:16350649-16350668 | MS.gene62998:CDS | 35.0% |
!! | AAACTACATGTCTTTAGGGT+GGG | - | chr1.3:16353824-16353843 | MS.gene62998:intron | 35.0% |
!! | AATTCTTGTCCCTCACTTTT+TGG | + | chr1.3:16354414-16354433 | None:intergenic | 35.0% |
!! | TATTGTCGTGTCATTTCTAG+TGG | - | chr1.3:16350636-16350655 | MS.gene62998:CDS | 35.0% |
!!! | ACAGCTTGGATTTGCTTTTT+GGG | - | chr1.3:16353402-16353421 | MS.gene62998:intron | 35.0% |
!!! | AGCACAAAGTTTTGTTCAGT+TGG | + | chr1.3:16352896-16352915 | None:intergenic | 35.0% |
!!! | TGCTTTTTGGGTATCTTTGA+AGG | - | chr1.3:16353414-16353433 | MS.gene62998:intron | 35.0% |
!!! | TTTTTGGGTATCTTTGAAGG+TGG | - | chr1.3:16353417-16353436 | MS.gene62998:intron | 35.0% |
AAGCCTAGAGTCAAAACCTA+TGG | + | chr1.3:16353484-16353503 | None:intergenic | 40.0% | |
AATATGCGACGACAAGACAA+TGG | - | chr1.3:16350576-16350595 | MS.gene62998:intron | 40.0% | |
AGTAACTGTATCAGGAGCAA+TGG | - | chr1.3:16352790-16352809 | MS.gene62998:intron | 40.0% | |
ATAAGGACCTTTCAAGGACA+AGG | + | chr1.3:16349265-16349284 | None:intergenic | 40.0% | |
GAATTGAAGAGCCTTACTCA+AGG | + | chr1.3:16349641-16349660 | None:intergenic | 40.0% | |
GACAACTTCGTAAGCATATG+TGG | - | chr1.3:16350263-16350282 | MS.gene62998:intron | 40.0% | |
GCATCAAACCAACATGAAAG+TGG | - | chr1.3:16352860-16352879 | MS.gene62998:intron | 40.0% | |
GGAACAGTAGTAACTGTATC+AGG | - | chr1.3:16352782-16352801 | MS.gene62998:intron | 40.0% | |
GGAATGGCATACTATGTACA+AGG | - | chr1.3:16353625-16353644 | MS.gene62998:intron | 40.0% | |
GGAGCTATTATCATTGTGTG+TGG | - | chr1.3:16354333-16354352 | MS.gene62998:CDS | 40.0% | |
GGGACAAGAATTGCCAATTA+AGG | - | chr1.3:16354422-16354441 | MS.gene62998:CDS | 40.0% | |
GTCGCATATTTCTCCCAATT+TGG | + | chr1.3:16350566-16350585 | None:intergenic | 40.0% | |
GTTCTTGGTTTCCTTGAGTA+AGG | - | chr1.3:16349627-16349646 | MS.gene62998:intron | 40.0% | |
TAAGGACCTTTCAAGGACAA+GGG | + | chr1.3:16349264-16349283 | None:intergenic | 40.0% | |
TATCACTCAACTATGCTTGG+TGG | - | chr1.3:16349829-16349848 | MS.gene62998:intron | 40.0% | |
TCCTGCATAGCCAAATTGAA+GGG | + | chr1.3:16349141-16349160 | None:intergenic | 40.0% | |
TGGACTTTACACTGTGGTAT+GGG | - | chr1.3:16354353-16354372 | MS.gene62998:CDS | 40.0% | |
TTCCTGCATAGCCAAATTGA+AGG | + | chr1.3:16349142-16349161 | None:intergenic | 40.0% | |
TTGGCTGAGCAAACACATTT+GGG | - | chr1.3:16353736-16353755 | MS.gene62998:intron | 40.0% | |
TTGTCCCTTAATGAGCTGAA+AGG | + | chr1.3:16352840-16352859 | None:intergenic | 40.0% | |
TTTCAAGGACAAGGGCAAAA+GGG | + | chr1.3:16349256-16349275 | None:intergenic | 40.0% | |
! | ATAAGCCATAAAGGCATGCA+TGG | + | chr1.3:16349783-16349802 | None:intergenic | 40.0% |
! | CAAACTACATGTCTTTAGGG+TGG | - | chr1.3:16353823-16353842 | MS.gene62998:intron | 40.0% |
! | TGACACTCCCTATCTTTTTG+AGG | - | chr1.3:16349598-16349617 | MS.gene62998:intron | 40.0% |
!! | AAGATAGGGAGTGTCATCTT+TGG | + | chr1.3:16349594-16349613 | None:intergenic | 40.0% |
!! | ATGCTCATTTCTAGTTGTGG+TGG | - | chr1.3:16352926-16352945 | MS.gene62998:intron | 40.0% |
!! | CATTTCTAGTTGTGGTGGTT+GGG | - | chr1.3:16352931-16352950 | MS.gene62998:intron | 40.0% |
!! | CGAAAACGTTTTAGTGACAC+TGG | + | chr1.3:16353184-16353203 | None:intergenic | 40.0% |
!! | GACAGCTTGGATTTGCTTTT+TGG | - | chr1.3:16353401-16353420 | MS.gene62998:intron | 40.0% |
!! | TCATTTCTAGTTGTGGTGGT+TGG | - | chr1.3:16352930-16352949 | MS.gene62998:intron | 40.0% |
!!! | GTTTTGTTCAGTTGGTTCTG+TGG | + | chr1.3:16352888-16352907 | None:intergenic | 40.0% |
ACCGCAAGCCTCAAAAAGAT+AGG | + | chr1.3:16349609-16349628 | None:intergenic | 45.0% | |
AGGGACACCATTGCAAGATA+AGG | + | chr1.3:16349122-16349141 | None:intergenic | 45.0% | |
CAAGCATGGCATGAGTCATT+GGG | - | chr1.3:16349187-16349206 | MS.gene62998:CDS | 45.0% | |
CACAGCATAGCAAAGGTAGT+TGG | - | chr1.3:16352761-16352780 | MS.gene62998:intron | 45.0% | |
CACATCCATGCATGCCTTTA+TGG | - | chr1.3:16349775-16349794 | MS.gene62998:intron | 45.0% | |
CCGCAAGCCTCAAAAAGATA+GGG | + | chr1.3:16349608-16349627 | None:intergenic | 45.0% | |
CCTAAAGACATGAAGGTTGC+AGG | - | chr1.3:16354495-16354514 | MS.gene62998:CDS | 45.0% | |
CCTGCAACCTTCATGTCTTT+AGG | + | chr1.3:16354498-16354517 | None:intergenic | 45.0% | |
CCTGCCTTTCAGCTCATTAA+GGG | - | chr1.3:16352833-16352852 | MS.gene62998:intron | 45.0% | |
CTGAGCAAACACATTTGGGA+AGG | - | chr1.3:16353740-16353759 | MS.gene62998:intron | 45.0% | |
CTGTGGTTCCACTTTCATGT+TGG | + | chr1.3:16352871-16352890 | None:intergenic | 45.0% | |
CTTGGCTGAGCAAACACATT+TGG | - | chr1.3:16353735-16353754 | MS.gene62998:intron | 45.0% | |
CTTTCAAGGACAAGGGCAAA+AGG | + | chr1.3:16349257-16349276 | None:intergenic | 45.0% | |
GACTTTAGTGTTTGGGCCAT+AGG | - | chr1.3:16353465-16353484 | MS.gene62998:intron | 45.0% | |
GCAATGGTGTCCCTTCAATT+TGG | - | chr1.3:16349128-16349147 | MS.gene62998:CDS | 45.0% | |
GGACTTTACACTGTGGTATG+GGG | - | chr1.3:16354354-16354373 | MS.gene62998:CDS | 45.0% | |
GTGGACTTTACACTGTGGTA+TGG | - | chr1.3:16354352-16354371 | MS.gene62998:CDS | 45.0% | |
TCAAGCATGGCATGAGTCAT+TGG | - | chr1.3:16349186-16349205 | MS.gene62998:CDS | 45.0% | |
TCCCTTCAATTTGGCTATGC+AGG | - | chr1.3:16349137-16349156 | MS.gene62998:CDS | 45.0% | |
TCCTGCCTTTCAGCTCATTA+AGG | - | chr1.3:16352832-16352851 | MS.gene62998:intron | 45.0% | |
TGCATTGGGTTCCATTGTCT+TGG | - | chr1.3:16353717-16353736 | MS.gene62998:intron | 45.0% | |
TGCTGGCAGAATGTTAACAG+TGG | + | chr1.3:16351875-16351894 | None:intergenic | 45.0% | |
TGTGTGTGGACTTTACACTG+TGG | - | chr1.3:16354347-16354366 | MS.gene62998:CDS | 45.0% | |
TGTTTGCTCAGCCAAGACAA+TGG | + | chr1.3:16353731-16353750 | None:intergenic | 45.0% | |
TTCAAGGACAAGGGCAAAAG+GGG | + | chr1.3:16349255-16349274 | None:intergenic | 45.0% | |
! | ATCATGAAGCTCATTCGGTG+AGG | + | chr1.3:16350118-16350137 | None:intergenic | 45.0% |
! | CTTTTGCCCTTGTCCTTGAA+AGG | - | chr1.3:16349255-16349274 | MS.gene62998:CDS | 45.0% |
!! | GTAGTAAGTTTATGGTGGGC+CGG | + | chr1.3:16353850-16353869 | None:intergenic | 45.0% |
!!! | CCCTATCTTTTTGAGGCTTG+CGG | - | chr1.3:16349605-16349624 | MS.gene62998:intron | 45.0% |
!!! | TTTTTGAGGCTTGCGGTTCT+TGG | - | chr1.3:16349612-16349631 | MS.gene62998:intron | 45.0% |
!! | AAAAAAAATAAATGATTAAT+AGG | - | chr1.3:16352103-16352122 | MS.gene62998:intron | 5.0% |
!! | TTTAGAAATAAAAAAAATAA+AGG | - | chr1.3:16350052-16350071 | MS.gene62998:intron | 5.0% |
!!! | TTATATAGTATTTTATTTTA+TGG | - | chr1.3:16351748-16351767 | MS.gene62998:CDS | 5.0% |
!!! | TTTTTTATTATATTTCTTAT+TGG | + | chr1.3:16353102-16353121 | None:intergenic | 5.0% |
CAGAGCTCTCAATGACAGCT+TGG | - | chr1.3:16353388-16353407 | MS.gene62998:intron | 50.0% | |
CCCTTAATGAGCTGAAAGGC+AGG | + | chr1.3:16352836-16352855 | None:intergenic | 50.0% | |
CGGTGAGGCCTAATTAGACA+AGG | + | chr1.3:16350103-16350122 | None:intergenic | 50.0% | |
CTGTCATTGAGAGCTCTGCT+GGG | + | chr1.3:16353386-16353405 | None:intergenic | 50.0% | |
GGAGTTGTGACAAGAGAACG+TGG | - | chr1.3:16353646-16353665 | MS.gene62998:intron | 50.0% | |
!! | GGGTATTGTGTGCTCTGGAA+TGG | - | chr1.3:16353609-16353628 | MS.gene62998:intron | 50.0% |
!! | GTGTAGGGTATTGTGTGCTC+TGG | - | chr1.3:16353604-16353623 | MS.gene62998:intron | 50.0% |
!! | TACATGTCTTTAGGGTGGGC+CGG | - | chr1.3:16353828-16353847 | MS.gene62998:intron | 50.0% |
!!! | GGGCCATAGGTTTTGACTCT+AGG | - | chr1.3:16353478-16353497 | MS.gene62998:intron | 50.0% |
GCTGTCATTGAGAGCTCTGC+TGG | + | chr1.3:16353387-16353406 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.3 | gene | 16349071 | 16354536 | 16349071 | ID=MS.gene62998 |
chr1.3 | mRNA | 16349071 | 16354536 | 16349071 | ID=MS.gene62998.t1;Parent=MS.gene62998 |
chr1.3 | exon | 16354331 | 16354536 | 16354331 | ID=MS.gene62998.t1.exon1;Parent=MS.gene62998.t1 |
chr1.3 | CDS | 16354331 | 16354536 | 16354331 | ID=cds.MS.gene62998.t1;Parent=MS.gene62998.t1 |
chr1.3 | exon | 16353964 | 16354026 | 16353964 | ID=MS.gene62998.t1.exon2;Parent=MS.gene62998.t1 |
chr1.3 | CDS | 16353964 | 16354026 | 16353964 | ID=cds.MS.gene62998.t1;Parent=MS.gene62998.t1 |
chr1.3 | exon | 16351684 | 16351800 | 16351684 | ID=MS.gene62998.t1.exon3;Parent=MS.gene62998.t1 |
chr1.3 | CDS | 16351684 | 16351800 | 16351684 | ID=cds.MS.gene62998.t1;Parent=MS.gene62998.t1 |
chr1.3 | exon | 16350634 | 16350874 | 16350634 | ID=MS.gene62998.t1.exon4;Parent=MS.gene62998.t1 |
chr1.3 | CDS | 16350634 | 16350874 | 16350634 | ID=cds.MS.gene62998.t1;Parent=MS.gene62998.t1 |
chr1.3 | exon | 16350086 | 16350244 | 16350086 | ID=MS.gene62998.t1.exon5;Parent=MS.gene62998.t1 |
chr1.3 | CDS | 16350086 | 16350244 | 16350086 | ID=cds.MS.gene62998.t1;Parent=MS.gene62998.t1 |
chr1.3 | exon | 16349846 | 16349997 | 16349846 | ID=MS.gene62998.t1.exon6;Parent=MS.gene62998.t1 |
chr1.3 | CDS | 16349846 | 16349997 | 16349846 | ID=cds.MS.gene62998.t1;Parent=MS.gene62998.t1 |
chr1.3 | exon | 16349071 | 16349281 | 16349071 | ID=MS.gene62998.t1.exon7;Parent=MS.gene62998.t1 |
chr1.3 | CDS | 16349071 | 16349281 | 16349071 | ID=cds.MS.gene62998.t1;Parent=MS.gene62998.t1 |
Gene Sequence |
Protein sequence |