AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene054900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054900.t1 MTR_0103s0090 97.527 364 9 0 1 364 1 364 0.0 715
MS.gene054900.t1 MTR_0103s0090 97.436 273 7 0 92 364 1 273 0.0 535
MS.gene054900.t1 MTR_6g007743 55.956 361 153 2 4 362 5 361 2.89e-140 403
MS.gene054900.t1 MTR_6g007757 56.098 369 153 5 1 364 1 365 8.54e-131 379
MS.gene054900.t1 MTR_6g007747 55.586 367 154 4 1 364 1 361 2.37e-130 377
MS.gene054900.t1 MTR_6g007740 54.918 366 158 3 1 363 1 362 1.11e-128 378
MS.gene054900.t1 MTR_6g007750 54.054 370 160 5 1 364 1 366 4.51e-127 369
MS.gene054900.t1 MTR_6g007760 59.295 312 120 2 1 308 1 309 3.14e-124 360
MS.gene054900.t1 MTR_6g007753 56.098 328 136 3 41 364 324 647 8.31e-118 355
MS.gene054900.t1 MTR_6g007753 44.142 367 158 5 1 364 1 323 1.26e-92 290
MS.gene054900.t1 MTR_1g014510 50.000 362 169 6 1 357 1 355 3.25e-113 337
MS.gene054900.t1 MTR_4g106720 45.198 354 188 5 1 350 1 352 9.20e-95 286
MS.gene054900.t1 MTR_6g007757 55.731 253 105 3 7 256 8 256 9.65e-89 268
MS.gene054900.t1 MTR_3g090550 43.804 347 189 3 8 354 3 343 1.06e-87 268
MS.gene054900.t1 MTR_5g034980 45.079 315 172 1 16 329 12 326 5.79e-84 259
MS.gene054900.t1 MTR_5g034930 40.909 352 187 5 14 355 9 349 5.16e-82 254
MS.gene054900.t1 MTR_5g034910 43.314 344 178 4 16 354 12 343 6.06e-81 251
MS.gene054900.t1 MTR_5g034990 43.314 344 188 6 9 350 12 350 1.44e-79 248
MS.gene054900.t1 MTR_5g034970 42.006 319 163 3 16 329 12 313 6.84e-65 209
MS.gene054900.t1 MTR_3g072560 37.538 325 196 6 12 333 19 339 3.11e-58 194
MS.gene054900.t1 MTR_0096s0100 30.259 347 233 6 6 348 13 354 1.31e-54 183
MS.gene054900.t1 MTR_1g030580 34.154 325 211 3 8 330 13 336 1.70e-54 184
MS.gene054900.t1 MTR_8g041390 33.333 339 212 8 7 335 9 343 3.35e-53 181
MS.gene054900.t1 MTR_3g012420 34.111 343 216 6 4 338 7 347 1.89e-52 179
MS.gene054900.t1 MTR_3g072500 34.839 310 195 4 37 340 46 354 1.75e-51 176
MS.gene054900.t1 MTR_1g068630 36.393 305 190 4 26 328 30 332 6.69e-51 174
MS.gene054900.t1 MTR_1g030600 31.044 364 237 7 7 357 14 376 3.16e-50 173
MS.gene054900.t1 MTR_5g034980 41.004 239 140 1 16 253 12 250 4.71e-50 170
MS.gene054900.t1 MTR_8g006010 32.113 355 231 3 11 355 10 364 1.13e-49 171
MS.gene054900.t1 MTR_6g036450 33.234 337 213 6 12 340 17 349 3.69e-49 169
MS.gene054900.t1 MTR_3g072530 32.716 324 206 6 37 350 40 361 1.21e-48 168
MS.gene054900.t1 MTR_3g095420 30.448 335 224 4 9 335 5 338 1.27e-48 168
MS.gene054900.t1 MTR_7g100050 31.742 356 233 6 7 358 9 358 1.03e-47 166
MS.gene054900.t1 MTR_3g095450 29.722 360 236 4 9 361 3 352 1.94e-47 165
MS.gene054900.t1 MTR_6g081840 34.098 305 186 5 58 356 58 353 4.62e-47 164
MS.gene054900.t1 MTR_3g095460 30.588 340 229 5 8 342 2 339 1.36e-45 159
MS.gene054900.t1 MTR_3g072500 35.857 251 154 3 96 340 2 251 5.67e-45 156
MS.gene054900.t1 MTR_1g074160 31.105 344 227 6 8 346 10 348 6.43e-45 157
MS.gene054900.t1 MTR_1g038560 31.307 329 213 6 22 343 11 333 9.89e-45 157
MS.gene054900.t1 MTR_2g065550 32.530 332 218 4 11 338 10 339 1.48e-44 157
MS.gene054900.t1 MTR_7g111830 30.205 341 221 6 9 335 5 342 2.99e-44 157
MS.gene054900.t1 MTR_4g129650 32.059 340 204 9 31 361 28 349 3.65e-44 156
MS.gene054900.t1 MTR_1g051120 31.549 355 230 5 7 358 12 356 7.48e-44 155
MS.gene054900.t1 MTR_1g074120 29.738 343 236 5 7 347 12 351 1.42e-43 154
MS.gene054900.t1 MTR_2g007960 29.708 377 240 8 10 363 11 385 2.72e-43 154
MS.gene054900.t1 MTR_8g006120 32.951 349 225 4 11 356 10 352 4.42e-43 154
MS.gene054900.t1 MTR_2g016710 30.233 344 226 5 8 340 5 345 5.40e-43 153
MS.gene054900.t1 MTR_2g007990 29.577 355 229 5 8 354 12 353 1.05e-42 153
MS.gene054900.t1 MTR_1g023180 31.045 335 208 4 16 329 26 358 2.67e-42 152
MS.gene054900.t1 MTR_4g094340 32.317 328 211 4 8 328 6 329 4.57e-42 150
MS.gene054900.t1 MTR_2g102340 31.268 355 233 8 15 363 16 365 5.14e-42 150
MS.gene054900.t1 MTR_1g030400 30.145 345 232 5 26 362 22 365 5.25e-42 150
MS.gene054900.t1 MTR_4g094340 32.317 328 211 4 8 328 24 347 6.67e-42 150
MS.gene054900.t1 MTR_1g070175 30.029 343 214 6 7 339 12 338 9.26e-42 150
MS.gene054900.t1 MTR_1g074070 30.612 343 229 6 7 346 12 348 1.45e-41 149
MS.gene054900.t1 MTR_2g007970 32.036 334 222 3 3 332 4 336 4.53e-41 149
MS.gene054900.t1 MTR_1g114210 29.143 350 226 7 6 345 6 343 8.27e-41 147
MS.gene054900.t1 MTR_3g112480 30.606 330 211 4 16 329 25 352 1.21e-39 145
MS.gene054900.t1 MTR_1g073990 30.303 330 227 3 5 332 10 338 1.23e-39 144
MS.gene054900.t1 MTR_3g095440 29.086 361 237 5 9 361 3 352 2.11e-39 143
MS.gene054900.t1 MTR_2g027030 31.118 331 221 4 3 328 4 332 4.32e-39 143
MS.gene054900.t1 MTR_8g006090 34.539 304 196 3 31 332 31 333 5.00e-39 142
MS.gene054900.t1 MTR_4g094360 29.670 364 242 7 12 364 15 375 2.51e-38 141
MS.gene054900.t1 MTR_1g074020 32.450 302 194 6 36 332 38 334 8.78e-38 139
MS.gene054900.t1 MTR_3g072520 30.368 326 221 4 8 328 6 330 9.02e-38 140
MS.gene054900.t1 MTR_8g092650 30.699 329 215 6 12 330 6 331 1.57e-37 138
MS.gene054900.t1 MTR_5g021160 30.547 311 203 4 22 328 26 327 1.26e-36 136
MS.gene054900.t1 MTR_8g006050 32.237 304 184 6 40 337 23 310 3.58e-36 134
MS.gene054900.t1 MTR_5g025340 29.909 331 213 5 16 329 15 343 5.89e-36 135
MS.gene054900.t1 MTR_4g094340 32.946 258 159 3 77 328 14 263 7.70e-36 132
MS.gene054900.t1 MTR_4g129650 32.692 260 151 7 108 361 1 242 1.77e-35 130
MS.gene054900.t1 MTR_5g025290 27.635 351 225 7 5 329 25 372 1.95e-35 134
MS.gene054900.t1 MTR_5g025290 28.313 332 217 6 16 329 16 344 3.43e-35 132
MS.gene054900.t1 MTR_4g094362 28.037 321 226 3 12 328 15 334 7.63e-35 132
MS.gene054900.t1 MTR_3g112480 31.559 263 165 2 82 329 35 297 9.14e-35 130
MS.gene054900.t1 MTR_5g025370 29.070 344 221 6 16 338 15 356 1.00e-34 131
MS.gene054900.t1 MTR_2g007260 29.248 359 235 5 8 357 11 359 1.58e-34 131
MS.gene054900.t1 MTR_4g094352 29.080 337 216 5 8 328 9 338 3.15e-34 130
MS.gene054900.t1 MTR_5g025400 27.473 364 237 8 16 356 16 375 4.00e-34 130
MS.gene054900.t1 MTR_1g014790 53.719 121 51 3 89 205 41 160 4.05e-34 125
MS.gene054900.t1 MTR_4g094342 28.746 327 217 4 8 323 10 331 6.51e-33 126
MS.gene054900.t1 MTR_2g016710 29.900 301 206 4 8 306 5 302 6.71e-33 125
MS.gene054900.t1 MTR_8g006090 34.694 245 158 2 89 332 10 253 1.83e-32 123
MS.gene054900.t1 MTR_4g094360 29.861 288 192 4 86 364 42 328 3.34e-32 124
MS.gene054900.t1 MTR_5g025330 27.826 345 228 6 31 356 29 371 4.34e-32 127
MS.gene054900.t1 MTR_5g021160 30.508 236 161 1 96 328 9 244 7.19e-32 121
MS.gene054900.t1 MTR_5g089390 28.754 313 211 6 42 346 43 351 7.63e-32 123
MS.gene054900.t1 MTR_1g052205 28.689 244 151 8 115 348 2 232 1.37e-29 114
MS.gene054900.t1 MTR_8g072350 27.628 333 218 7 16 329 14 342 2.34e-29 117
MS.gene054900.t1 MTR_8g006090 32.014 278 187 2 31 306 31 308 3.04e-29 115
MS.gene054900.t1 MTR_8g092650 28.070 228 157 2 110 330 26 253 1.04e-28 112
MS.gene054900.t1 MTR_3g072500 33.333 219 141 3 36 250 45 262 1.05e-28 113
MS.gene054900.t1 MTR_5g069040 25.625 320 230 3 16 328 23 341 8.57e-28 112
MS.gene054900.t1 MTR_5g068790 25.231 325 223 4 16 328 23 339 1.59e-27 112
MS.gene054900.t1 MTR_1g074160 31.349 252 163 6 8 254 10 256 4.78e-27 108
MS.gene054900.t1 MTR_3g019050 26.791 321 221 5 16 328 23 337 5.28e-27 110
MS.gene054900.t1 MTR_3g095440 29.644 253 169 4 9 253 3 254 1.95e-26 106
MS.gene054900.t1 MTR_4g094360 28.904 301 206 5 12 306 15 313 2.53e-26 107
MS.gene054900.t1 MTR_3g112480 29.333 225 145 1 119 329 1 225 1.35e-25 104
MS.gene054900.t1 MTR_5g021160 31.381 239 151 4 22 256 26 255 4.95e-25 102
MS.gene054900.t1 MTR_4g094340 30.888 259 168 4 8 259 6 260 1.83e-23 98.6
MS.gene054900.t1 MTR_4g094340 30.888 259 168 4 8 259 24 278 4.36e-23 97.8
MS.gene054900.t1 MTR_3g072500 33.714 175 111 3 36 206 45 218 1.83e-22 94.7
MS.gene054900.t1 MTR_5g012650 26.250 320 210 6 44 348 40 348 1.84e-22 97.4
MS.gene054900.t1 MTR_8g006090 34.722 216 139 2 31 244 31 246 5.51e-21 92.0
MS.gene054900.t1 MTR_3g072530 28.063 253 141 7 37 250 40 290 7.19e-21 92.0
MS.gene054900.t1 MTR_2g102340 30.522 249 162 7 15 255 42 287 8.90e-21 92.0
MS.gene054900.t1 MTR_1g051120 30.049 203 139 3 7 207 12 213 5.86e-19 84.7
MS.gene054900.t1 MTR_4g100840 25.352 355 237 10 8 348 11 351 2.34e-18 85.5
MS.gene054900.t1 MTR_1g051120 28.448 232 159 4 7 236 12 238 5.36e-18 83.2
MS.gene054900.t1 MTR_4g094340 31.373 204 129 4 8 204 24 223 5.26e-16 76.6
MS.gene054900.t1 MTR_4g094342 33.333 165 108 2 8 171 10 173 1.01e-15 76.6
MS.gene054900.t1 MTR_8g006090 35.032 157 101 1 89 244 10 166 1.09e-14 72.8
MS.gene054900.t1 MTR_4g094348 33.058 121 71 2 96 206 7 127 4.77e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene054900.t1 AT3G28050 56.793 368 143 4 1 355 1 365 2.57e-136 393
MS.gene054900.t1 AT5G40240 51.895 343 159 2 1 338 9 350 8.46e-124 361
MS.gene054900.t1 AT5G40240 51.895 343 159 2 1 338 9 350 8.46e-124 361
MS.gene054900.t1 AT5G40240 51.895 343 159 2 1 338 23 364 2.02e-123 361
MS.gene054900.t1 AT5G40230 50.556 360 167 3 1 355 10 363 4.13e-119 349
MS.gene054900.t1 AT4G15540 49.704 338 161 1 1 338 6 334 1.09e-101 304
MS.gene054900.t1 AT4G15540 49.704 338 161 1 1 338 6 334 1.09e-101 304
MS.gene054900.t1 AT5G40210 45.869 351 173 3 4 353 5 339 4.28e-100 300
MS.gene054900.t1 AT3G28130 49.020 357 164 6 8 356 9 355 5.20e-93 282
MS.gene054900.t1 AT3G28100 49.249 333 154 6 16 338 18 345 5.69e-86 264
MS.gene054900.t1 AT3G28080 46.974 347 172 5 16 356 18 358 7.31e-86 264
MS.gene054900.t1 AT3G28070 46.957 345 174 5 16 356 21 360 1.85e-83 258
MS.gene054900.t1 AT3G28080 44.957 347 171 6 16 356 18 350 2.64e-77 242
MS.gene054900.t1 AT3G28070 46.667 270 135 5 91 356 4 268 9.70e-72 225
MS.gene054900.t1 AT3G28130 46.739 276 133 5 87 356 2 269 2.11e-71 224
MS.gene054900.t1 AT3G28130 46.739 276 133 5 87 356 2 269 2.11e-71 224
MS.gene054900.t1 AT3G28070 47.797 295 149 3 16 306 21 314 4.57e-69 219
MS.gene054900.t1 AT3G28080 45.956 272 135 5 91 356 4 269 9.29e-68 214
MS.gene054900.t1 AT3G28080 45.956 272 135 5 91 356 4 269 9.29e-68 214
MS.gene054900.t1 AT3G28080 45.956 272 135 5 91 356 4 269 9.29e-68 214
MS.gene054900.t1 AT3G28080 45.956 272 135 5 91 356 4 269 9.29e-68 214
MS.gene054900.t1 AT3G28080 41.618 346 138 5 16 356 18 304 3.69e-64 206
MS.gene054900.t1 AT1G70260 35.393 356 217 4 1 345 1 354 1.70e-61 202
MS.gene054900.t1 AT3G28130 49.802 253 119 3 8 254 9 259 5.38e-60 194
MS.gene054900.t1 AT1G60050 34.819 359 216 7 7 348 8 365 2.71e-59 196
MS.gene054900.t1 AT1G21890 35.260 346 210 4 4 337 3 346 6.90e-58 193
MS.gene054900.t1 AT3G28100 47.638 254 125 3 8 255 10 261 1.93e-57 188
MS.gene054900.t1 AT2G39510 33.426 359 233 5 8 363 4 359 2.66e-56 188
MS.gene054900.t1 AT4G08300 33.542 319 203 4 37 350 36 350 8.64e-55 184
MS.gene054900.t1 AT3G28130 43.697 238 120 5 125 356 1 230 1.35e-53 177
MS.gene054900.t1 AT2G37460 35.976 328 204 5 4 328 7 331 2.81e-53 181
MS.gene054900.t1 AT5G07050 34.431 334 200 6 12 331 18 346 3.07e-53 181
MS.gene054900.t1 AT3G28070 42.797 236 126 5 125 356 1 231 7.01e-53 175
MS.gene054900.t1 AT4G08290 32.102 352 234 3 8 355 9 359 8.73e-53 179
MS.gene054900.t1 AT3G30340 35.404 322 191 6 19 329 15 330 1.25e-52 178
MS.gene054900.t1 AT1G44800 34.007 297 193 3 36 330 35 330 9.16e-52 176
MS.gene054900.t1 AT3G28080 42.857 238 124 5 125 356 1 232 7.44e-51 170
MS.gene054900.t1 AT3G28130 51.961 204 91 2 8 206 9 210 2.07e-47 160
MS.gene054900.t1 AT3G28100 51.232 203 92 2 16 213 18 218 5.83e-47 160
MS.gene054900.t1 AT3G28080 39.114 271 101 5 91 356 4 215 4.93e-46 157
MS.gene054900.t1 AT1G21890 33.861 316 195 4 4 307 3 316 1.32e-45 159
MS.gene054900.t1 AT3G56620 33.016 315 206 5 12 325 11 321 2.25e-45 160
MS.gene054900.t1 AT4G30420 31.776 321 214 4 28 343 14 334 1.31e-43 155
MS.gene054900.t1 AT4G30420 31.776 321 214 4 28 343 24 344 1.34e-43 155
MS.gene054900.t1 AT5G13670 32.219 329 215 5 7 329 3 329 5.84e-43 153
MS.gene054900.t1 AT2G40900 33.432 338 208 8 12 345 11 335 7.82e-43 153
MS.gene054900.t1 AT1G09380 30.341 323 218 3 9 325 5 326 1.69e-42 152
MS.gene054900.t1 AT5G64700 31.378 341 221 5 12 343 8 344 1.46e-41 149
MS.gene054900.t1 AT2G37450 32.716 324 195 4 6 328 3 304 1.85e-41 148
MS.gene054900.t1 AT3G18200 30.029 343 233 5 16 354 39 378 7.65e-41 148
MS.gene054900.t1 AT1G75500 30.247 324 214 4 16 329 24 345 8.63e-40 145
MS.gene054900.t1 AT1G75500 30.247 324 214 4 16 329 24 345 8.63e-40 145
MS.gene054900.t1 AT4G01430 29.191 346 235 7 25 364 22 363 1.27e-39 144
MS.gene054900.t1 AT1G68170 30.172 348 235 4 4 344 3 349 1.74e-39 144
MS.gene054900.t1 AT3G53210 32.609 322 203 7 16 329 14 329 4.11e-39 143
MS.gene054900.t1 AT5G45370 30.411 365 222 11 16 355 24 381 9.23e-39 142
MS.gene054900.t1 AT5G45370 30.411 365 222 11 16 355 24 381 9.23e-39 142
MS.gene054900.t1 AT1G68170 30.838 334 225 3 16 344 7 339 1.25e-38 141
MS.gene054900.t1 AT5G45370 30.172 348 221 10 16 355 24 357 1.36e-38 141
MS.gene054900.t1 AT4G28040 31.268 339 207 8 15 344 13 334 2.39e-38 140
MS.gene054900.t1 AT4G28040 31.268 339 207 8 15 344 13 334 2.39e-38 140
MS.gene054900.t1 AT4G28040 31.268 339 207 8 15 344 13 334 2.39e-38 140
MS.gene054900.t1 AT4G28040 31.268 339 207 8 15 344 13 334 2.39e-38 140
MS.gene054900.t1 AT4G28040 31.268 339 207 8 15 344 13 334 2.39e-38 140
MS.gene054900.t1 AT1G01070 29.429 333 225 6 23 346 24 355 1.93e-37 138
MS.gene054900.t1 AT1G11450 29.969 327 210 6 12 328 16 333 8.11e-37 136
MS.gene054900.t1 AT1G43650 30.675 326 222 3 16 340 11 333 1.14e-36 135
MS.gene054900.t1 AT1G11460 29.193 322 220 5 12 328 16 334 8.80e-36 133
MS.gene054900.t1 AT4G01440 27.647 340 230 8 5 334 3 336 5.43e-35 132
MS.gene054900.t1 AT3G53210 33.750 240 149 4 96 329 37 272 1.36e-34 129
MS.gene054900.t1 AT1G25270 29.377 337 225 6 16 344 7 338 2.77e-34 130
MS.gene054900.t1 AT3G30340 35.319 235 135 6 19 242 15 243 6.27e-34 127
MS.gene054900.t1 AT2G37450 35.193 233 149 2 97 328 1 232 8.56e-34 126
MS.gene054900.t1 AT1G11450 30.375 293 185 6 46 328 6 289 1.69e-33 126
MS.gene054900.t1 AT1G11450 30.345 290 183 6 49 328 2 282 5.70e-33 125
MS.gene054900.t1 AT1G01070 28.155 309 214 5 44 346 2 308 1.76e-32 124
MS.gene054900.t1 AT4G08290 32.794 247 161 3 8 250 9 254 1.46e-31 120
MS.gene054900.t1 AT4G01430 30.556 288 193 6 25 306 22 308 1.57e-31 121
MS.gene054900.t1 AT5G45370 31.338 284 165 9 96 355 2 279 1.07e-30 118
MS.gene054900.t1 AT5G45370 31.338 284 165 9 96 355 2 279 1.07e-30 118
MS.gene054900.t1 AT3G18200 30.522 249 170 2 108 354 1 248 2.35e-30 117
MS.gene054900.t1 AT4G01440 26.923 312 215 7 5 309 3 308 1.25e-29 116
MS.gene054900.t1 AT1G11450 31.818 242 148 4 96 328 8 241 1.12e-28 112
MS.gene054900.t1 AT1G11450 28.197 305 200 6 12 306 16 311 2.40e-28 113
MS.gene054900.t1 AT4G19185 26.426 333 222 6 16 329 25 353 3.45e-26 108
MS.gene054900.t1 AT3G45870 25.545 321 224 4 16 323 16 334 4.41e-26 108
MS.gene054900.t1 AT5G64700 31.746 252 162 4 12 254 8 258 1.33e-25 104
MS.gene054900.t1 AT4G01440 30.204 245 158 7 5 242 3 241 6.17e-25 102
MS.gene054900.t1 AT4G19185 26.538 260 170 4 88 329 19 275 9.86e-25 103
MS.gene054900.t1 AT3G53210 34.722 216 127 7 37 244 35 244 1.20e-24 101
MS.gene054900.t1 AT3G28060 42.276 123 69 2 185 306 33 154 3.41e-24 97.4
MS.gene054900.t1 AT2G37450 33.495 206 135 2 124 328 61 265 7.44e-24 100
MS.gene054900.t1 AT4G01440 25.652 230 163 4 111 334 1 228 1.91e-23 98.2
MS.gene054900.t1 AT4G01440 25.652 230 163 4 111 334 1 228 1.91e-23 98.2
MS.gene054900.t1 AT4G24980 26.821 302 150 8 31 329 6 239 7.09e-22 94.4
MS.gene054900.t1 AT3G45870 24.671 304 214 4 16 306 16 317 4.36e-21 93.2
MS.gene054900.t1 AT4G01450 24.551 334 241 4 12 341 10 336 8.78e-21 92.8
MS.gene054900.t1 AT5G45370 29.528 254 149 9 126 355 74 321 6.81e-20 89.7
MS.gene054900.t1 AT4G01450 28.922 204 134 4 12 211 10 206 1.67e-19 87.4
MS.gene054900.t1 AT4G01450 28.922 204 134 4 12 211 10 206 1.70e-19 87.0
MS.gene054900.t1 AT4G01450 23.944 284 205 4 27 306 25 301 1.71e-19 89.0
MS.gene054900.t1 AT5G47470 24.316 329 212 7 37 348 83 391 2.08e-19 89.0
MS.gene054900.t1 AT5G47470 24.242 330 213 7 37 349 55 364 2.09e-19 89.0
MS.gene054900.t1 AT1G43650 31.381 239 160 3 16 253 11 246 5.67e-19 85.9
MS.gene054900.t1 AT3G28070 55.963 109 48 0 16 124 21 129 6.32e-19 84.7
MS.gene054900.t1 AT5G47470 24.281 313 201 6 37 332 83 376 2.12e-18 86.3
MS.gene054900.t1 AT4G01430 25.328 229 164 4 140 364 1 226 7.68e-18 82.0
MS.gene054900.t1 AT3G45870 27.189 217 144 3 16 219 16 231 1.08e-16 79.7
MS.gene054900.t1 AT4G16620 26.444 329 201 10 52 360 50 357 3.59e-16 79.3
MS.gene054900.t1 AT4G16620 25.267 281 172 8 97 360 1 260 2.98e-15 75.5
MS.gene054900.t1 AT4G16620 25.267 281 172 8 97 360 1 260 2.98e-15 75.5
MS.gene054900.t1 AT3G45870 22.619 252 179 3 84 323 12 259 4.52e-13 69.7

Find 83 sgRNAs with CRISPR-Local

Find 220 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATGCAAAATTGGTCTTCT+TGG 0.222542 7.3:-63819090 MS.gene054900:CDS
AAGATCACTGTTAGTTCATT+TGG 0.241737 7.3:+63816870 None:intergenic
TGCATATGTGCTACGTATAA+AGG 0.248399 7.3:-63816616 MS.gene054900:CDS
TACAAGGATTTGGTTCCTTT+TGG 0.276744 7.3:-63819459 MS.gene054900:CDS
AAGATATTGTTACAAGGATT+TGG 0.289371 7.3:-63819469 MS.gene054900:CDS
CTATGGGAGTTGTGTTCCTT+GGG 0.307563 7.3:-63816542 MS.gene054900:CDS
TGATAGACTACAAAAGAAAA+TGG 0.318170 7.3:-63815741 MS.gene054900:CDS
AAACCAATACTATGCAAAAT+TGG 0.339357 7.3:-63819099 MS.gene054900:CDS
GCTATGGGAGTTGTGTTCCT+TGG 0.340738 7.3:-63816543 MS.gene054900:CDS
AGTATATATTAGTTCCCTTA+TGG 0.340842 7.3:-63817031 MS.gene054900:CDS
GGAGCCACAATAATATCAAT+TGG 0.341846 7.3:-63815872 MS.gene054900:CDS
CAGAAGTTCATCTCAAATCA+TGG 0.348039 7.3:-63818961 MS.gene054900:CDS
AATGCAAGTGCATGGAAAAT+AGG 0.350999 7.3:-63816789 MS.gene054900:CDS
TATGCAAAATTGGTCTTCTT+GGG 0.365472 7.3:-63819089 MS.gene054900:CDS
AATTGTCATTGCTGTGGCTA+TGG 0.375954 7.3:-63816559 MS.gene054900:CDS
TGCTCCTGATATAGATACTA+TGG 0.377453 7.3:+63817181 None:intergenic
GCATATGTGCTACGTATAAA+GGG 0.394947 7.3:-63816615 MS.gene054900:CDS
TTGGTCTTCTTGGGTTGATC+GGG 0.412468 7.3:-63819080 MS.gene054900:intron
TCTCAAATCATGGGTTATAC+AGG 0.430929 7.3:-63818951 MS.gene054900:CDS
CATAGTATTGGTTTACTAAG+AGG 0.434696 7.3:+63819108 None:intergenic
GGTACCATAGTATCTATATC+AGG 0.442799 7.3:-63817185 MS.gene054900:CDS
ATTGGTCTTCTTGGGTTGAT+CGG 0.449307 7.3:-63819081 MS.gene054900:CDS
TACTAACCTTGTGGAGATGA+AGG 0.451898 7.3:+63819302 None:intergenic
AATCATCATCAGATCAAAGC+TGG 0.457498 7.3:-63817082 MS.gene054900:CDS
ATTGTCATTGCTGTGGCTAT+GGG 0.457527 7.3:-63816558 MS.gene054900:CDS
TTCCTCAGCCATCAGCAACT+TGG 0.458083 7.3:-63818904 MS.gene054900:CDS
GAGCCACAATAATATCAATT+GGG 0.460525 7.3:-63815871 MS.gene054900:CDS
TACCTGTACAATGTACCATA+AGG 0.465976 7.3:+63817016 None:intergenic
TTCAAAGCTGCTACCGTGAA+AGG 0.466886 7.3:-63819390 MS.gene054900:CDS
TCCCTTATGGTACATTGTAC+AGG 0.496069 7.3:-63817018 MS.gene054900:intron
GATCTAAGAGCAATGATGAT+TGG 0.500241 7.3:+63817131 None:intergenic
AAGAAGAAACCTGAAAATGA+TGG 0.507022 7.3:+63818857 None:intergenic
ATGGTAACTCATTCCTTTCA+CGG 0.511389 7.3:+63819377 None:intergenic
GTTTCATAGCTTTGCAAGAG+AGG 0.511744 7.3:+63815764 None:intergenic
ACCTGTACAATGTACCATAA+GGG 0.513397 7.3:+63817017 None:intergenic
AGCATTATAGCTGGAATTGT+AGG 0.513970 7.3:-63816828 MS.gene054900:CDS
TCAGATCAAAGCTGGGCCAT+TGG 0.519930 7.3:-63817074 MS.gene054900:CDS
ATGGTAACCATCAAACCAAA+AGG 0.520460 7.3:+63819444 None:intergenic
GGGATACTCTCCACCTTGGA+AGG 0.520551 7.3:-63816521 MS.gene054900:intron
ACTTGCTTCCATCCTTTGCT+CGG 0.525985 7.3:-63816754 MS.gene054900:intron
GATCAAAGCTGGGCCATTGG+TGG 0.533016 7.3:-63817071 MS.gene054900:CDS
CACCAAGTTGCTGATGGCTG+AGG 0.534009 7.3:+63818902 None:intergenic
AAGTAGTCAAGCCAAGGTGG+TGG 0.543714 7.3:-63817207 MS.gene054900:CDS
AAACCCAATTGATATTATTG+TGG 0.543749 7.3:+63815868 None:intergenic
TCTACAGGTTCAAATTATGA+AGG 0.549298 7.3:-63816898 MS.gene054900:intron
CAGCTATAATGCTTACACAT+AGG 0.549528 7.3:+63816838 None:intergenic
CTATGTGTAAGCATTATAGC+TGG 0.553567 7.3:-63816837 MS.gene054900:CDS
CTTGGGGATACTCTCCACCT+TGG 0.559205 7.3:-63816525 MS.gene054900:CDS
AGAAGTTCATCTCAAATCAT+GGG 0.564341 7.3:-63818960 MS.gene054900:CDS
CTTGTGGAGATGAAGGGTGC+TGG 0.565297 7.3:+63819309 None:intergenic
GCAAGCAAGAAGGTAAAAGC+TGG 0.569611 7.3:+63818879 None:intergenic
GAAAATGATGGCAAGCAAGA+AGG 0.569755 7.3:+63818869 None:intergenic
ATGTTTATCCTACCGAGCAA+AGG 0.577106 7.3:+63816742 None:intergenic
GTAAATCATAGTACCTTCCA+AGG 0.577444 7.3:+63816508 None:intergenic
ACTAACCTTGTGGAGATGAA+GGG 0.578351 7.3:+63819303 None:intergenic
GTGAGCCAAATGCAAGTGCA+TGG 0.578354 7.3:-63816797 MS.gene054900:CDS
GGCACTAAGATATTGTTACA+AGG 0.582034 7.3:-63819475 MS.gene054900:CDS
TTATCCTACCGAGCAAAGGA+TGG 0.584798 7.3:+63816746 None:intergenic
TACTATGGTACCCACCACCT+TGG 0.588212 7.3:+63817196 None:intergenic
AGCTGGCACCAAGTTGCTGA+TGG 0.594486 7.3:+63818896 None:intergenic
ATCATCATCAGATCAAAGCT+GGG 0.596636 7.3:-63817081 MS.gene054900:CDS
AGCAACGTTGATGCATTCCA+TGG 0.599026 7.3:+63819425 None:intergenic
GAGGTGGTTGAAGATGTCTC+TGG 0.600990 7.3:-63815815 MS.gene054900:CDS
CTAAGAGCAATGATGATTGG+TGG 0.604707 7.3:+63817134 None:intergenic
TATGGGAGTTGTGTTCCTTG+GGG 0.604835 7.3:-63816541 MS.gene054900:CDS
AGTATTGGTTTACTAAGAGG+AGG 0.609608 7.3:+63819111 None:intergenic
TTTATAGTGACACTATACAT+AGG 0.612426 7.3:-63817158 MS.gene054900:CDS
AAGTTTAAGTAGTCAAGCCA+AGG 0.623683 7.3:-63817213 MS.gene054900:CDS
TGTAAGTAGAAGACCACCAA+TGG 0.628504 7.3:+63817058 None:intergenic
CAGCACCCTTCATCTCCACA+AGG 0.628610 7.3:-63819308 MS.gene054900:intron
AGTAGTCAAGCCAAGGTGGT+GGG 0.631238 7.3:-63817206 MS.gene054900:CDS
CATATGTGCTACGTATAAAG+GGG 0.638887 7.3:-63816614 MS.gene054900:CDS
GGGCAAAGCAAAAGAAGAGG+TGG 0.648057 7.3:-63815831 MS.gene054900:CDS
TGGAGATGAAGGGTGCTGGA+AGG 0.648947 7.3:+63819313 None:intergenic
ACTCTCAATTGTCATTGCTG+TGG 0.661857 7.3:-63816565 MS.gene054900:CDS
CTGATGGCTGAGGAAAGAGT+AGG 0.662492 7.3:+63818912 None:intergenic
TTTAAGTAGTCAAGCCAAGG+TGG 0.670840 7.3:-63817210 MS.gene054900:CDS
GTGGGGCAAAGCAAAAGAAG+AGG 0.672876 7.3:-63815834 MS.gene054900:CDS
ACAGCAATGACAATTGAGAG+TGG 0.674965 7.3:+63816567 None:intergenic
AATCATAGTACCTTCCAAGG+TGG 0.690246 7.3:+63816511 None:intergenic
CAAGGTGGAGAGTATCCCCA+AGG 0.691065 7.3:+63816526 None:intergenic
AAGCATAAACAACAAAGACA+TGG 0.700920 7.3:+63819358 None:intergenic
ATATGTGCTACGTATAAAGG+GGG 0.701724 7.3:-63816613 MS.gene054900:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTTTTTAATTTTTT+AGG + chr7.3:63816538-63816557 None:intergenic 0.0%
!! TTAAAAAGAATATATGTTAA+AGG + chr7.3:63817718-63817737 None:intergenic 10.0%
!! AAACAAACATATATAAAGAA+CGG + chr7.3:63817460-63817479 None:intergenic 15.0%
!! CAAATTAACTACTTAAATAA+TGG + chr7.3:63816798-63816817 None:intergenic 15.0%
!! CATTATTTAAGTAGTTAATT+TGG - chr7.3:63816796-63816815 MS.gene054900:CDS 15.0%
!! TTATACAATTCATATGATTA+GGG - chr7.3:63818532-63818551 MS.gene054900:intron 15.0%
!! TTTATACAATTCATATGATT+AGG - chr7.3:63818531-63818550 MS.gene054900:intron 15.0%
!! TTTATATATGTTTGTTTAGA+TGG - chr7.3:63817463-63817482 MS.gene054900:intron 15.0%
!!! AAATTTTCTTTATAATCTAC+AGG - chr7.3:63818291-63818310 MS.gene054900:intron 15.0%
!!! ATATTTTTATGTTCGAAATT+GGG - chr7.3:63816908-63816927 MS.gene054900:intron 15.0%
!!! TAAATTTTACCAAACAATAT+AGG + chr7.3:63816889-63816908 None:intergenic 15.0%
!!! TAATTTTCATTTTACTTTTG+TGG - chr7.3:63816759-63816778 MS.gene054900:CDS 15.0%
!!! TATATTTTTATGTTCGAAAT+TGG - chr7.3:63816907-63816926 MS.gene054900:intron 15.0%
!!! TTAATTGTCATTTTCAATAT+TGG - chr7.3:63816512-63816531 MS.gene054900:intron 15.0%
!!! TTCAATTGATTAATGATTTT+CGG - chr7.3:63818817-63818836 MS.gene054900:intron 15.0%
!!! TTTATTTTGCAATTTTAATG+TGG - chr7.3:63816200-63816219 MS.gene054900:intron 15.0%
!!! TTTTCTAAGACAATTTTTAA+AGG - chr7.3:63817795-63817814 MS.gene054900:intron 15.0%
!! AAATTAAATTGTCCTTGAAA+AGG - chr7.3:63817853-63817872 MS.gene054900:intron 20.0%
!! AACAAACATATATAAAGAAC+GGG + chr7.3:63817459-63817478 None:intergenic 20.0%
!! ACCAAAAATTAATATTTGAC+TGG - chr7.3:63819047-63819066 MS.gene054900:intron 20.0%
!! CTTATGACAAAAATAAGAAT+CGG - chr7.3:63817762-63817781 MS.gene054900:intron 20.0%
!!! CAATTGAGAATTGAATATTT+TGG + chr7.3:63818721-63818740 None:intergenic 20.0%
!!! TCATATTTCATTTTTTCTGT+TGG - chr7.3:63817937-63817956 MS.gene054900:intron 20.0%
!!! TCCAGTCAAATATTAATTTT+TGG + chr7.3:63819051-63819070 None:intergenic 20.0%
!!! TTTTCAATTTGGAAATGTTT+TGG + chr7.3:63816971-63816990 None:intergenic 20.0%
!!! TTTTTCTGTTGGTTTAATTA+AGG - chr7.3:63817948-63817967 MS.gene054900:intron 20.0%
! AAAAACTTAGGCAAAATTGT+TGG + chr7.3:63817126-63817145 None:intergenic 25.0%
! AAACCAATACTATGCAAAAT+TGG - chr7.3:63816105-63816124 MS.gene054900:intron 25.0%
! AAACCCAATTGATATTATTG+TGG + chr7.3:63819339-63819358 None:intergenic 25.0%
! AAGATATTGTTACAAGGATT+TGG - chr7.3:63815735-63815754 MS.gene054900:CDS 25.0%
! AGTATATATTAGTTCCCTTA+TGG - chr7.3:63818173-63818192 MS.gene054900:intron 25.0%
! ATAACATAGTTCCGTAAAAA+TGG + chr7.3:63816851-63816870 None:intergenic 25.0%
! ATATAATGCATTGTACTTAC+CGG + chr7.3:63816608-63816627 None:intergenic 25.0%
! GGATAAACATGAAATAATAC+AGG - chr7.3:63818475-63818494 MS.gene054900:intron 25.0%
! TACAATGCATTATATATGCA+AGG - chr7.3:63816613-63816632 MS.gene054900:CDS 25.0%
! TGATAGACTACAAAAGAAAA+TGG - chr7.3:63819463-63819482 MS.gene054900:CDS 25.0%
! TGGTTAATTCACAAATTCAA+GGG + chr7.3:63816951-63816970 None:intergenic 25.0%
! TTAATTAAGGATGGAAAAAG+TGG - chr7.3:63817961-63817980 MS.gene054900:intron 25.0%
! TTGGTTAATTCACAAATTCA+AGG + chr7.3:63816952-63816971 None:intergenic 25.0%
! TTTATAGTGACACTATACAT+AGG - chr7.3:63818046-63818065 MS.gene054900:intron 25.0%
!! GACAATTTAATTTCTTGTGT+GGG + chr7.3:63817846-63817865 None:intergenic 25.0%
!! TCATATGATTAGGGAATTTT+TGG - chr7.3:63818541-63818560 MS.gene054900:intron 25.0%
!! TTGATCAACGATTTTCAATT+TGG + chr7.3:63816982-63817001 None:intergenic 25.0%
!! TTTTACCAAACAATATAGGT+AGG + chr7.3:63816885-63816904 None:intergenic 25.0%
!!! AATTACCTTTTTTTTTGTGG+TGG + chr7.3:63816658-63816677 None:intergenic 25.0%
!!! CATGATTTCCTTTGTTTTTT+AGG + chr7.3:63816439-63816458 None:intergenic 25.0%
!!! GACAATTACCTTTTTTTTTG+TGG + chr7.3:63816661-63816680 None:intergenic 25.0%
!!! TACAAACTCATTTTAGTTCT+TGG - chr7.3:63818263-63818282 MS.gene054900:intron 25.0%
AAGAAGAAACCTGAAAATGA+TGG + chr7.3:63816350-63816369 None:intergenic 30.0%
AAGATCACTGTTAGTTCATT+TGG + chr7.3:63818337-63818356 None:intergenic 30.0%
AAGCATAAACAACAAAGACA+TGG + chr7.3:63815849-63815868 None:intergenic 30.0%
AGAAGTTCATCTCAAATCAT+GGG - chr7.3:63816244-63816263 MS.gene054900:intron 30.0%
AGTATAAGACCCTTGAATTT+GGG + chr7.3:63817062-63817081 None:intergenic 30.0%
ATCTTTACCAAGACTTTACT+TGG - chr7.3:63819074-63819093 MS.gene054900:intron 30.0%
ATGCTAAGAACACTAGTTAT+GGG + chr7.3:63817434-63817453 None:intergenic 30.0%
ATGTAATTTGACCTTAGTTG+AGG + chr7.3:63819020-63819039 None:intergenic 30.0%
CATTAATCACATGAGTTCAA+CGG + chr7.3:63818995-63819014 None:intergenic 30.0%
CTACGTTGAATACAAATGTT+TGG - chr7.3:63818794-63818813 MS.gene054900:intron 30.0%
CTATGACAATTCAATGAGTT+TGG - chr7.3:63817635-63817654 MS.gene054900:intron 30.0%
GAGACGATGTAAAAAGTTTA+GGG + chr7.3:63815977-63815996 None:intergenic 30.0%
GAGCCACAATAATATCAATT+GGG - chr7.3:63819333-63819352 MS.gene054900:CDS 30.0%
GGTTAATTCACAAATTCAAG+GGG + chr7.3:63816950-63816969 None:intergenic 30.0%
TAGTATAAGACCCTTGAATT+TGG + chr7.3:63817063-63817082 None:intergenic 30.0%
TAGTATGTGTAATGTTTGCT+TGG + chr7.3:63816490-63816509 None:intergenic 30.0%
TCTACAGGTTCAAATTATGA+AGG - chr7.3:63818306-63818325 MS.gene054900:intron 30.0%
TGAGACGATGTAAAAAGTTT+AGG + chr7.3:63815978-63815997 None:intergenic 30.0%
TGATCGAACTCTAAATTAGT+CGG - chr7.3:63819101-63819120 MS.gene054900:CDS 30.0%
TTCAACCTACCTATATTGTT+TGG - chr7.3:63816877-63816896 MS.gene054900:CDS 30.0%
TTGTACAGGTACAAATTTGT+TGG - chr7.3:63818200-63818219 MS.gene054900:intron 30.0%
! ACACCATTGATGCTTTTATT+AGG + chr7.3:63817604-63817623 None:intergenic 30.0%
! AGACCAATTTTGCATAGTAT+TGG + chr7.3:63816111-63816130 None:intergenic 30.0%
! CTTTTATTAGGATCTACATG+TGG + chr7.3:63817592-63817611 None:intergenic 30.0%
! GGACAATTTAATTTCTTGTG+TGG + chr7.3:63817847-63817866 None:intergenic 30.0%
! TTCTTATAGCTACCTTTTCA+AGG + chr7.3:63817868-63817887 None:intergenic 30.0%
!! CAGACATTTTAATCAGTGTA+TGG - chr7.3:63817504-63817523 MS.gene054900:intron 30.0%
!! CATAGTATTGGTTTACTAAG+AGG + chr7.3:63816099-63816118 None:intergenic 30.0%
!! GATCCTAATAAAAGCATCAA+TGG - chr7.3:63817598-63817617 MS.gene054900:intron 30.0%
!! GTTTGTTTAGATGGATTGAT+AGG - chr7.3:63817472-63817491 MS.gene054900:intron 30.0%
!! TATGCAAAATTGGTCTTCTT+GGG - chr7.3:63816115-63816134 MS.gene054900:intron 30.0%
!! TCCATCTATGACCATTTTTA+CGG - chr7.3:63816837-63816856 MS.gene054900:CDS 30.0%
!! TCTGTTGGTTTAATTAAGGA+TGG - chr7.3:63817952-63817971 MS.gene054900:intron 30.0%
!! TGGGTTTTATACAGTAATGT+GGG - chr7.3:63819352-63819371 MS.gene054900:CDS 30.0%
!! TTGGGTTTTATACAGTAATG+TGG - chr7.3:63819351-63819370 MS.gene054900:CDS 30.0%
!!! TTTTTTCTCTACTAACCTTG+TGG + chr7.3:63815914-63815933 None:intergenic 30.0%
AAAACCGTTTCTCATGAGAA+CGG - chr7.3:63818937-63818956 MS.gene054900:CDS 35.0%
AAATTGGGAATATCCGTCAA+AGG - chr7.3:63816923-63816942 MS.gene054900:intron 35.0%
AAGTTTAAGTAGTCAAGCCA+AGG - chr7.3:63817991-63818010 MS.gene054900:intron 35.0%
AATATCTTGCGATAAAGCTG+AGG + chr7.3:63817562-63817581 None:intergenic 35.0%
AATCATCATCAGATCAAAGC+TGG - chr7.3:63818122-63818141 MS.gene054900:intron 35.0%
AATGCAAGTGCATGGAAAAT+AGG - chr7.3:63818415-63818434 MS.gene054900:intron 35.0%
ACCTGTACAATGTACCATAA+GGG + chr7.3:63818190-63818209 None:intergenic 35.0%
AGCATTATAGCTGGAATTGT+AGG - chr7.3:63818376-63818395 MS.gene054900:intron 35.0%
AGTCTGGTAAATGATTGTTC+TGG + chr7.3:63818885-63818904 None:intergenic 35.0%
ATATGTGCTACGTATAAAGG+GGG - chr7.3:63818591-63818610 MS.gene054900:intron 35.0%
ATCATCATCAGATCAAAGCT+GGG - chr7.3:63818123-63818142 MS.gene054900:intron 35.0%
ATGGTAACCATCAAACCAAA+AGG + chr7.3:63815763-63815782 None:intergenic 35.0%
ATGGTAACTCATTCCTTTCA+CGG + chr7.3:63815830-63815849 None:intergenic 35.0%
CAAAATCCAAATAATGTGGC+TGG + chr7.3:63817028-63817047 None:intergenic 35.0%
CAGAAGTTCATCTCAAATCA+TGG - chr7.3:63816243-63816262 MS.gene054900:intron 35.0%
CAGCTATAATGCTTACACAT+AGG + chr7.3:63818369-63818388 None:intergenic 35.0%
CATATGTGCTACGTATAAAG+GGG - chr7.3:63818590-63818609 MS.gene054900:intron 35.0%
CATGCTAAGAACACTAGTTA+TGG + chr7.3:63817435-63817454 None:intergenic 35.0%
CGGAGATTGTTGAATCAATA+GGG - chr7.3:63818837-63818856 MS.gene054900:intron 35.0%
CTATGTGTAAGCATTATAGC+TGG - chr7.3:63818367-63818386 MS.gene054900:intron 35.0%
CTCTTAACCTTTCGATTCAT+CGG + chr7.3:63819139-63819158 None:intergenic 35.0%
GAACTGACTGAATAACTGTT+TGG + chr7.3:63819208-63819227 None:intergenic 35.0%
GAGTTCAGCCTAAAAAACAA+AGG - chr7.3:63816428-63816447 MS.gene054900:intron 35.0%
GATCTAAGAGCAATGATGAT+TGG + chr7.3:63818076-63818095 None:intergenic 35.0%
GCAAAATTGTTGGAGTAATG+TGG + chr7.3:63817116-63817135 None:intergenic 35.0%
GCATATGTGCTACGTATAAA+GGG - chr7.3:63818589-63818608 MS.gene054900:intron 35.0%
GGAGCCACAATAATATCAAT+TGG - chr7.3:63819332-63819351 MS.gene054900:CDS 35.0%
GGCACTAAGATATTGTTACA+AGG - chr7.3:63815729-63815748 MS.gene054900:CDS 35.0%
GGTACCATAGTATCTATATC+AGG - chr7.3:63818019-63818038 MS.gene054900:intron 35.0%
GGTCCAAAATCCAAATAATG+TGG + chr7.3:63817032-63817051 None:intergenic 35.0%
GTAAATCATAGTACCTTCCA+AGG + chr7.3:63818699-63818718 None:intergenic 35.0%
TACCTGTACAATGTACCATA+AGG + chr7.3:63818191-63818210 None:intergenic 35.0%
TCAAGAACCAAGTAAAGTCT+TGG + chr7.3:63819084-63819103 None:intergenic 35.0%
TCCGTAAAAATGGTCATAGA+TGG + chr7.3:63816841-63816860 None:intergenic 35.0%
TCGGAGATTGTTGAATCAAT+AGG - chr7.3:63818836-63818855 MS.gene054900:intron 35.0%
TGATTAATGAGCCTCAACTA+AGG - chr7.3:63819006-63819025 MS.gene054900:intron 35.0%
TGCATATGTGCTACGTATAA+AGG - chr7.3:63818588-63818607 MS.gene054900:intron 35.0%
TGCATTATATATGCAAGGTC+CGG - chr7.3:63816618-63816637 MS.gene054900:CDS 35.0%
TGCTCCTGATATAGATACTA+TGG + chr7.3:63818026-63818045 None:intergenic 35.0%
! AACTGTTTGGAACTCTTGAA+GGG + chr7.3:63819195-63819214 None:intergenic 35.0%
! ATTTTCCATGCACTTGCATT+TGG + chr7.3:63818415-63818434 None:intergenic 35.0%
! CAGCCACATTATTTGGATTT+TGG - chr7.3:63817026-63817045 MS.gene054900:CDS 35.0%
! GCATCAATGGTGTTAGAATA+AGG - chr7.3:63817611-63817630 MS.gene054900:intron 35.0%
! TAACTGTTTGGAACTCTTGA+AGG + chr7.3:63819196-63819215 None:intergenic 35.0%
! TCTCAAATCATGGGTTATAC+AGG - chr7.3:63816253-63816272 MS.gene054900:intron 35.0%
!! AAACGGTTTTGATAATCCAG+GGG + chr7.3:63818927-63818946 None:intergenic 35.0%
!! ACCATTTTTGCCCAAATTCA+AGG - chr7.3:63817049-63817068 MS.gene054900:CDS 35.0%
!! AGAAACGGTTTTGATAATCC+AGG + chr7.3:63818929-63818948 None:intergenic 35.0%
!! AGTATTGGTTTACTAAGAGG+AGG + chr7.3:63816096-63816115 None:intergenic 35.0%
!! CCATTTTTGCCCAAATTCAA+GGG - chr7.3:63817050-63817069 MS.gene054900:CDS 35.0%
!! CTATGCAAAATTGGTCTTCT+TGG - chr7.3:63816114-63816133 MS.gene054900:intron 35.0%
!! GAAACGGTTTTGATAATCCA+GGG + chr7.3:63818928-63818947 None:intergenic 35.0%
!! GGGTTTTATACAGTAATGTG+GGG - chr7.3:63819353-63819372 MS.gene054900:CDS 35.0%
!! TACAAGGATTTGGTTCCTTT+TGG - chr7.3:63815745-63815764 MS.gene054900:CDS 35.0%
!! TGTGCTTTTTGCAGTGTAAT+TGG - chr7.3:63819311-63819330 MS.gene054900:CDS 35.0%
!!! TTTGGTTCCTTTTGGTTTGA+TGG - chr7.3:63815753-63815772 MS.gene054900:CDS 35.0%
!!! TTTTGGTTTGATGGTTACCA+TGG - chr7.3:63815762-63815781 MS.gene054900:CDS 35.0%
AAATTCAAGGGGTCCTTTGA+CGG + chr7.3:63816939-63816958 None:intergenic 40.0%
AATCATAGTACCTTCCAAGG+TGG + chr7.3:63818696-63818715 None:intergenic 40.0%
AATTCAATGAGTTTGGCCTC+TGG - chr7.3:63817642-63817661 MS.gene054900:intron 40.0%
AATTGTCATTGCTGTGGCTA+TGG - chr7.3:63818645-63818664 MS.gene054900:intron 40.0%
AATTGTTGGAGTAATGTGGC+TGG + chr7.3:63817112-63817131 None:intergenic 40.0%
ACAGCAATGACAATTGAGAG+TGG + chr7.3:63818640-63818659 None:intergenic 40.0%
ACTAACCTTGTGGAGATGAA+GGG + chr7.3:63815904-63815923 None:intergenic 40.0%
ACTCTCAATTGTCATTGCTG+TGG - chr7.3:63818639-63818658 MS.gene054900:intron 40.0%
ATACCACTGGACTACACTTT+CGG - chr7.3:63816002-63816021 MS.gene054900:intron 40.0%
ATGTTTATCCTACCGAGCAA+AGG + chr7.3:63818465-63818484 None:intergenic 40.0%
ATTGTCATTGCTGTGGCTAT+GGG - chr7.3:63818646-63818665 MS.gene054900:intron 40.0%
ATTTCCTCCGATGAATCGAA+AGG - chr7.3:63819129-63819148 MS.gene054900:intron 40.0%
CATTATATATGCAAGGTCCG+GGG - chr7.3:63816620-63816639 MS.gene054900:CDS 40.0%
CCCTTGAATTTGGGCAAAAA+TGG + chr7.3:63817053-63817072 None:intergenic 40.0%
CCTAGCCACCACAAAAAAAA+AGG - chr7.3:63816650-63816669 MS.gene054900:CDS 40.0%
CTAAGAGCAATGATGATTGG+TGG + chr7.3:63818073-63818092 None:intergenic 40.0%
GAAAATGATGGCAAGCAAGA+AGG + chr7.3:63816338-63816357 None:intergenic 40.0%
GCATTATATATGCAAGGTCC+GGG - chr7.3:63816619-63816638 MS.gene054900:CDS 40.0%
TACTAACCTTGTGGAGATGA+AGG + chr7.3:63815905-63815924 None:intergenic 40.0%
TCCCTTATGGTACATTGTAC+AGG - chr7.3:63818186-63818205 MS.gene054900:intron 40.0%
TGTAAGTAGAAGACCACCAA+TGG + chr7.3:63818149-63818168 None:intergenic 40.0%
TTAACCTTTCGATTCATCGG+AGG + chr7.3:63819136-63819155 None:intergenic 40.0%
TTTAAGTAGTCAAGCCAAGG+TGG - chr7.3:63817994-63818013 MS.gene054900:intron 40.0%
! GGTAAATGATTGTTCTGGCT+AGG + chr7.3:63818880-63818899 None:intergenic 40.0%
! GTTTCATAGCTTTGCAAGAG+AGG + chr7.3:63819443-63819462 None:intergenic 40.0%
! TCTTGCTTGCCATCATTTTC+AGG - chr7.3:63816338-63816357 MS.gene054900:intron 40.0%
!! ATTGGTCTTCTTGGGTTGAT+CGG - chr7.3:63816123-63816142 MS.gene054900:intron 40.0%
!!! CCTTTTTTTTTGTGGTGGCT+AGG + chr7.3:63816653-63816672 None:intergenic 40.0%
ACTTGCTTCCATCCTTTGCT+CGG - chr7.3:63818450-63818469 MS.gene054900:intron 45.0%
AGCAACGTTGATGCATTCCA+TGG + chr7.3:63815782-63815801 None:intergenic 45.0%
ATCGTCTCAACTCATACCAC+TGG - chr7.3:63815989-63816008 MS.gene054900:intron 45.0%
CTATGGGAGTTGTGTTCCTT+GGG - chr7.3:63818662-63818681 MS.gene054900:intron 45.0%
GCAAGCAAGAAGGTAAAAGC+TGG + chr7.3:63816328-63816347 None:intergenic 45.0%
GTCACAAGGCAAGTAAAGTC+TGG + chr7.3:63818901-63818920 None:intergenic 45.0%
TATGGGAGTTGTGTTCCTTG+GGG - chr7.3:63818663-63818682 MS.gene054900:intron 45.0%
TGATAGAGCCGTGAACTAGA+CGG + chr7.3:63817670-63817689 None:intergenic 45.0%
TTATCCTACCGAGCAAAGGA+TGG + chr7.3:63818461-63818480 None:intergenic 45.0%
TTCAAAGCTGCTACCGTGAA+AGG - chr7.3:63815814-63815833 MS.gene054900:CDS 45.0%
!! GGTTTTGATAATCCAGGGGT+CGG + chr7.3:63818923-63818942 None:intergenic 45.0%
!! TTGGTCTTCTTGGGTTGATC+GGG - chr7.3:63816124-63816143 MS.gene054900:intron 45.0%
!! TAAAAAAAAAAAAAAAACTT+AGG + chr7.3:63817138-63817157 None:intergenic 5.0%
AAGTAGTCAAGCCAAGGTGG+TGG - chr7.3:63817997-63818016 MS.gene054900:intron 50.0%
ACCGTTTCTCATGAGAACGG+AGG - chr7.3:63818940-63818959 MS.gene054900:CDS 50.0%
AGTAGTCAAGCCAAGGTGGT+GGG - chr7.3:63817998-63818017 MS.gene054900:intron 50.0%
CCAACACATGCTTGCACATG+AGG + chr7.3:63816409-63816428 None:intergenic 50.0%
CCCTCCGTTCTCATGAGAAA+CGG + chr7.3:63818944-63818963 None:intergenic 50.0%
CCGTTTCTCATGAGAACGGA+GGG - chr7.3:63818941-63818960 MS.gene054900:CDS 50.0%
CCTCATGTGCAAGCATGTGT+TGG - chr7.3:63816406-63816425 MS.gene054900:intron 50.0%
CGGTTGAGCTAAACTCACGA+GGG + chr7.3:63816588-63816607 None:intergenic 50.0%
CGTGTGCCAGCCACATTATT+TGG - chr7.3:63817019-63817038 MS.gene054900:CDS 50.0%
CTGATGGCTGAGGAAAGAGT+AGG + chr7.3:63816295-63816314 None:intergenic 50.0%
GAGGTGGTTGAAGATGTCTC+TGG - chr7.3:63819389-63819408 MS.gene054900:CDS 50.0%
GATAGAGCCGTGAACTAGAC+GGG + chr7.3:63817669-63817688 None:intergenic 50.0%
GCTATGGGAGTTGTGTTCCT+TGG - chr7.3:63818661-63818680 MS.gene054900:intron 50.0%
GGGCAAAGCAAAAGAAGAGG+TGG - chr7.3:63819373-63819392 MS.gene054900:CDS 50.0%
GTGAGCCAAATGCAAGTGCA+TGG - chr7.3:63818407-63818426 MS.gene054900:intron 50.0%
GTGGGGCAAAGCAAAAGAAG+AGG - chr7.3:63819370-63819389 MS.gene054900:CDS 50.0%
TACTATGGTACCCACCACCT+TGG + chr7.3:63818011-63818030 None:intergenic 50.0%
TCAGATCAAAGCTGGGCCAT+TGG - chr7.3:63818130-63818149 MS.gene054900:intron 50.0%
TTCCTCAGCCATCAGCAACT+TGG - chr7.3:63816300-63816319 MS.gene054900:intron 50.0%
! AGTCCGAAAGTGTAGTCCAG+TGG + chr7.3:63816008-63816027 None:intergenic 50.0%
! CCTCGTGAGTTTAGCTCAAC+CGG - chr7.3:63816586-63816605 MS.gene054900:CDS 50.0%
AGCTGGCACCAAGTTGCTGA+TGG + chr7.3:63816311-63816330 None:intergenic 55.0%
CACCAAGTTGCTGATGGCTG+AGG + chr7.3:63816305-63816324 None:intergenic 55.0%
CAGCACCCTTCATCTCCACA+AGG - chr7.3:63815896-63815915 MS.gene054900:intron 55.0%
CCGGTTGAGCTAAACTCACG+AGG + chr7.3:63816589-63816608 None:intergenic 55.0%
CTTGGGGATACTCTCCACCT+TGG - chr7.3:63818679-63818698 MS.gene054900:intron 55.0%
GATCAAAGCTGGGCCATTGG+TGG - chr7.3:63818133-63818152 MS.gene054900:intron 55.0%
GCTTCCATCCTTTGCTCGGT+AGG - chr7.3:63818454-63818473 MS.gene054900:intron 55.0%
GGGATACTCTCCACCTTGGA+AGG - chr7.3:63818683-63818702 MS.gene054900:intron 55.0%
GGTGGCTAGGATTTGAACCC+CGG + chr7.3:63816640-63816659 None:intergenic 55.0%
TAATCCAGGGGTCGGTCACA+AGG + chr7.3:63818915-63818934 None:intergenic 55.0%
TAATGTGGCTGGCACACGCA+AGG + chr7.3:63817017-63817036 None:intergenic 55.0%
! CTCTGGACCCGTCTAGTTCA+CGG - chr7.3:63817659-63817678 MS.gene054900:intron 55.0%
! CTTGTGGAGATGAAGGGTGC+TGG + chr7.3:63815898-63815917 None:intergenic 55.0%
!! CAAGGTGGAGAGTATCCCCA+AGG + chr7.3:63818681-63818700 None:intergenic 55.0%
!! TGGAGATGAAGGGTGCTGGA+AGG + chr7.3:63815894-63815913 None:intergenic 55.0%
CGTGAACTAGACGGGTCCAG+AGG + chr7.3:63817661-63817680 None:intergenic 60.0%
CTTGCCTTGTGACCGACCCC+TGG - chr7.3:63818908-63818927 MS.gene054900:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 63815727 63819499 63815727 ID=MS.gene054900
chr7.3 mRNA 63815727 63819499 63815727 ID=MS.gene054900.t1;Parent=MS.gene054900
chr7.3 exon 63819309 63819499 63819309 ID=MS.gene054900.t1.exon1;Parent=MS.gene054900.t1
chr7.3 CDS 63819309 63819499 63819309 ID=cds.MS.gene054900.t1;Parent=MS.gene054900.t1
chr7.3 exon 63819081 63819146 63819081 ID=MS.gene054900.t1.exon2;Parent=MS.gene054900.t1
chr7.3 CDS 63819081 63819146 63819081 ID=cds.MS.gene054900.t1;Parent=MS.gene054900.t1
chr7.3 exon 63818867 63818980 63818867 ID=MS.gene054900.t1.exon3;Parent=MS.gene054900.t1
chr7.3 CDS 63818867 63818980 63818867 ID=cds.MS.gene054900.t1;Parent=MS.gene054900.t1
chr7.3 exon 63817019 63817256 63817019 ID=MS.gene054900.t1.exon4;Parent=MS.gene054900.t1
chr7.3 CDS 63817019 63817256 63817019 ID=cds.MS.gene054900.t1;Parent=MS.gene054900.t1
chr7.3 exon 63816755 63816913 63816755 ID=MS.gene054900.t1.exon5;Parent=MS.gene054900.t1
chr7.3 CDS 63816755 63816913 63816755 ID=cds.MS.gene054900.t1;Parent=MS.gene054900.t1
chr7.3 exon 63816522 63816673 63816522 ID=MS.gene054900.t1.exon6;Parent=MS.gene054900.t1
chr7.3 CDS 63816522 63816673 63816522 ID=cds.MS.gene054900.t1;Parent=MS.gene054900.t1
chr7.3 exon 63815727 63815901 63815727 ID=MS.gene054900.t1.exon7;Parent=MS.gene054900.t1
chr7.3 CDS 63815727 63815901 63815727 ID=cds.MS.gene054900.t1;Parent=MS.gene054900.t1
Gene Sequence

>MS.gene054900

ATGGCACTAAGATATTGTTACAAGGATTTGGTTCCTTTTGGTTTGATGGTTACCATGGAATGCATCAACGTTGCTTTGAATACTCTTTTCAAAGCTGCTACCGTGAAAGGAATGAGTTACCATGTCTTTGTTGTTTATGCTTATGCTGTTGCTGCTTTTGTTCTCCTTCCAGCACCCTTCATCTCCACAAGGTTAGTAGAGAAAAAAAAATTTAGTAGTCACAAAAAATTTAGTAGTCACGATCGAACCCTAAACTTTTTACATCGTCTCAACTCATACCACTGGACTACACTTTCGGACTTGACTAGTCATGTTGAATTTGAATTGTTTGATTTTGTCTCTTTTCTTTGCAGATCAAGAGTGCTTCCTCCTCTTAGTAAACCAATACTATGCAAAATTGGTCTTCTTGGGTTGATCGGGTACAAAGTTAAAAGTCAAATGATTAATTATTTTTTACAAATTTTAAGTGTTTATTTATTTTGCAATTTTAATGTGGTATGTTTTGTTTCAATTTTGCAGAAGTTCATCTCAAATCATGGGTTATACAGGTATTAGTTATAGTTCTCCTACTCTTTCCTCAGCCATCAGCAACTTGGTGCCAGCTTTTACCTTCTTGCTTGCCATCATTTTCAGGTTTCTTCTTATTTTGTTATTTTACTACTAGTAATTTCTAAGTAATCCTCATGTGCAAGCATGTGTTGGAGTTCAGCCTAAAAAACAAAGGAAATCATGATATTTTTTTGTCAACTTAGTAAAAATGCCAAGCAAACATTACACATACTATGTTAATTGTCATTTTCAATATTGGCCTAAAAAATTAAAAAAATAAAAATAATGTTCTAAAGTAATTGTCATTTGCCCTCGTGAGTTTAGCTCAACCGGTAAGTACAATGCATTATATATGCAAGGTCCGGGGTTCAAATCCTAGCCACCACAAAAAAAAAGGTAATTGTCATTTTCAATATAAAATTAATTGTTTTTTCTTCTAATTATATTATTTAATTAATAACATGTGTATCGCTCTTATGTTATTAATTTTCATTTTACTTTTGTGGTCATAAGAATAGACCATTATTTAAGTAGTTAATTTGGTAAAGTTGTTATTTTTTTTCCATCTATGACCATTTTTACGGAACTATGTTATTTGATTTTCAACCTACCTATATTGTTTGGTAAAATTTATATTTTTATGTTCGAAATTGGGAATATCCGTCAAAGGACCCCTTGAATTTGTGAATTAACCAAAACATTTCCAAATTGAAAATCGTTGATCAATATATATATTGACCTTGCGTGTGCCAGCCACATTATTTGGATTTTGGACCATTTTTGCCCAAATTCAAGGGTCTTATACTAAGTTCAAGATATTGACCTTGCGTGTGCCAGCCACATTACTCCAACAATTTTGCCTAAGTTTTTTTTTTTTTTTTATACTCTAATTTTTATCATTTTAATTGAAAAAGATCTACAACACACGCTAATCGTAAAAAAGATGAAAGTCATACATAATACAATCATTTTTCTTTTTTTAAGAAACATAATACAATCATTTTATCGTTGAATTCTTTATAAAAAATGTTAACAAGTATTTTAACAACATTCGTTAATAAATTCAAAGAATAACTTTATCTTAAGAATGATGTATTCAATATTTTGAAACTTTAAAACATTTTGTATAAAACTTATAAATTATTTTATTTTAAACCCATAACTAGTGTTCTTAGCATGACCCGTTCTTTATATATGTTTGTTTAGATGGATTGATAGGTTTGCGTAACAGACATTTTAATCAGTGTATGGTCTATCTTTTTGCTTAGACATTTTAAGAAAAACCTCAGCTTTATCGCAAGATATTTATATCTCCACATGTAGATCCTAATAAAAGCATCAATGGTGTTAGAATAAGGACTATGACAATTCAATGAGTTTGGCCTCTGGACCCGTCTAGTTCACGGCTCTATCAATTATATGTGCTCGTATTTTCTTGTCCTTTAACATATATTCTTTTTAAATAAATAATGACATGTATTATATACTTATGACAAAAATAAGAATCGGACATATATTATTTTCTAAGACAATTTTTAAAGGAAATTATTATTCAGTTAGATGAGTACCCACACAAGAAATTAAATTGTCCTTGAAAAGGTAGCTATAAGAAGTTTATTTATAAATTAATTTGTACATAAACTCTCTTATTGTGTATTAATTCATATTTCATTTTTTCTGTTGGTTTAATTAAGGATGGAAAAAGTGGCTATAAAAAGTTTAAGTAGTCAAGCCAAGGTGGTGGGTACCATAGTATCTATATCAGGAGCATTTATAGTGACACTATACATAGGACCACCAATCATCATTGCTCTTAGATCTTCAAATTCACTTCATCAAACTCTTAAATCATCATCAGATCAAAGCTGGGCCATTGGTGGTCTTCTACTTACAGCTGAGTATATATTAGTTCCCTTATGGTACATTGTACAGGTACAAATTTGTTGGTTACTAATATATATGTATAAGCTTCTAACTAATTAACAATTACAAACTCATTTTAGTTCTTGGTTCACAAATTTTCTTTATAATCTACAGGTTCAAATTATGAAGGTGTATCCAAATGAACTAACAGTGATCTTCTATTACAACCTATGTGTAAGCATTATAGCTGGAATTGTAGGTGTGATTAGTGAGCCAAATGCAAGTGCATGGAAAATAGGACTTGATACATCACTTGCTTCCATCCTTTGCTCGGTAGGATAAACATGAAATAATACAGGAGTTTAATCTAAAATTACATTTACTAATTATAATTTATACAATTCATATGATTAGGGAATTTTTGGATCATTCTTGAACAATACAGTTCATGCATATGTGCTACGTATAAAGGGGGCTGTATATGTTGCAATGTTCAAACCACTCTCAATTGTCATTGCTGTGGCTATGGGAGTTGTGTTCCTTGGGGATACTCTCCACCTTGGAAGGTACTATGATTTACCAAAATATTCAATTCTCAATTGTAAATCACATGTTCATTCAATTTTTCACTAATCTTTTCACTTTAAAAAGCTAACTACGTTGAATACAAATGTTTGGTTCAATTGATTAATGATTTTCGGAGATTGTTGAATCAATAGGGAGTCTTTGAGTTCAAAGCCTAGCCAGAACAATCATTTACCAGACTTTACTTGCCTTGTGACCGACCCCTGGATTATCAAAACCGTTTCTCATGAGAACGGAGGGTCAAGACAGAAAAATATATTTAATAAAGCCGTTGAACTCATGTGATTAATGAGCCTCAACTAAGGTCAAATTACATAAAAAGTACCAAAAATTAATATTTGACTGGAACAATCTTTACCAAGACTTTACTTGGTTCTTGATCGAACTCTAAATTAGTCGGTCTCTATTTCCTCCGATGAATCGAAAGGTTAAGAGAACAAAAATAATTGCTAGCTATATTCATGATATCCCTTCAAGAGTTCCAAACAGTTATTCAGTCAGTTCATCTATCAATTAGTACTTACACTTCTAAAAGAGAGACAATAAAAGATTTAGTTTGTTGCGCTGCTAATGTTTTAAAATTCATTTGTGCTTTTTGCAGTGTAATTGGAGCCACAATAATATCAATTGGGTTTTATACAGTAATGTGGGGCAAAGCAAAAGAAGAGGTGGTTGAAGATGTCTCTGGCGACGAAACACAAACTACACAGACTGTTCCTCTCTTGCAAAGCTATGAAACTGATAGACTACAAAAGAAAATGGATGCAAATGTATAA
Protein sequence

>MS.gene054900.t1

MALRYCYKDLVPFGLMVTMECINVALNTLFKAATVKGMSYHVFVVYAYAVAAFVLLPAPFISTRSRVLPPLSKPILCKIGLLGLIGSSSQIMGYTGISYSSPTLSSAISNLVPAFTFLLAIIFRMEKVAIKSLSSQAKVVGTIVSISGAFIVTLYIGPPIIIALRSSNSLHQTLKSSSDQSWAIGGLLLTAEYILVPLWYIVQVQIMKVYPNELTVIFYYNLCVSIIAGIVGVISEPNASAWKIGLDTSLASILCSGIFGSFLNNTVHAYVLRIKGAVYVAMFKPLSIVIAVAMGVVFLGDTLHLGSVIGATIISIGFYTVMWGKAKEEVVEDVSGDETQTTQTVPLLQSYETDRLQKKMDANV