AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene30034

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene30034.t1 MTR_0103s0090 97.253 364 10 0 1 364 1 364 0.0 711
MS.gene30034.t1 MTR_0103s0090 97.070 273 8 0 92 364 1 273 0.0 530
MS.gene30034.t1 MTR_6g007743 56.111 360 152 2 4 361 5 360 3.06e-139 400
MS.gene30034.t1 MTR_6g007757 56.098 369 153 5 1 364 1 365 1.41e-129 376
MS.gene30034.t1 MTR_6g007747 55.586 367 154 4 1 364 1 361 7.69e-129 374
MS.gene30034.t1 MTR_6g007740 54.918 366 158 3 1 363 1 362 3.04e-127 374
MS.gene30034.t1 MTR_6g007750 54.223 367 158 5 1 361 1 363 3.95e-126 367
MS.gene30034.t1 MTR_6g007760 59.295 312 120 2 1 308 1 309 3.04e-124 360
MS.gene30034.t1 MTR_6g007753 56.098 328 136 3 41 364 324 647 8.34e-117 353
MS.gene30034.t1 MTR_6g007753 44.142 367 158 5 1 364 1 323 1.12e-91 288
MS.gene30034.t1 MTR_1g014510 49.719 356 171 5 1 349 1 355 1.07e-112 336
MS.gene30034.t1 MTR_4g106720 45.198 354 188 5 1 350 1 352 1.14e-94 286
MS.gene30034.t1 MTR_6g007757 55.731 253 105 3 7 256 8 256 7.43e-89 269
MS.gene30034.t1 MTR_3g090550 43.840 349 190 3 8 356 3 345 3.45e-87 267
MS.gene30034.t1 MTR_5g034980 45.079 315 172 1 16 329 12 326 4.23e-84 259
MS.gene30034.t1 MTR_5g034910 45.031 322 162 5 16 329 12 326 4.99e-81 251
MS.gene30034.t1 MTR_5g034930 41.210 347 183 5 14 350 9 344 5.38e-81 251
MS.gene30034.t1 MTR_5g034990 43.314 344 188 6 9 350 12 350 1.40e-79 248
MS.gene30034.t1 MTR_5g034970 42.006 319 163 3 16 329 12 313 6.76e-65 209
MS.gene30034.t1 MTR_3g072560 37.538 325 196 6 12 333 19 339 3.14e-58 194
MS.gene30034.t1 MTR_1g030580 32.778 360 236 6 8 364 13 369 1.46e-55 186
MS.gene30034.t1 MTR_0096s0100 30.259 347 233 6 6 348 13 354 1.20e-54 184
MS.gene30034.t1 MTR_8g041390 33.333 339 212 8 7 335 9 343 3.76e-53 181
MS.gene30034.t1 MTR_3g012420 34.111 343 216 6 4 338 7 347 1.85e-52 179
MS.gene30034.t1 MTR_3g072500 33.433 335 213 6 37 364 46 377 6.23e-52 177
MS.gene30034.t1 MTR_1g068630 36.393 305 190 4 26 328 30 332 7.67e-51 174
MS.gene30034.t1 MTR_5g034980 41.004 239 140 1 16 253 12 250 4.97e-50 170
MS.gene30034.t1 MTR_1g030600 31.044 364 237 7 7 357 14 376 5.30e-50 172
MS.gene30034.t1 MTR_8g006010 31.933 357 233 3 11 357 10 366 1.24e-49 171
MS.gene30034.t1 MTR_6g036450 33.234 337 213 6 12 340 17 349 3.58e-49 169
MS.gene30034.t1 MTR_3g095420 30.448 335 224 4 9 335 5 338 1.37e-48 168
MS.gene30034.t1 MTR_3g072530 32.716 324 206 6 37 350 40 361 1.40e-48 168
MS.gene30034.t1 MTR_3g095450 29.917 361 236 4 9 362 3 353 3.74e-48 166
MS.gene30034.t1 MTR_7g100050 31.742 356 233 6 7 358 9 358 2.31e-47 165
MS.gene30034.t1 MTR_6g081840 34.426 305 185 5 58 356 58 353 2.97e-47 164
MS.gene30034.t1 MTR_3g095460 30.588 340 229 5 8 342 2 339 1.16e-45 159
MS.gene30034.t1 MTR_3g072500 34.058 276 172 5 96 364 2 274 2.36e-45 157
MS.gene30034.t1 MTR_1g074160 30.994 342 230 5 8 346 10 348 5.98e-45 158
MS.gene30034.t1 MTR_1g038560 31.307 329 213 6 22 343 11 333 9.69e-45 157
MS.gene30034.t1 MTR_2g065550 32.530 332 218 4 11 338 10 339 1.87e-44 157
MS.gene30034.t1 MTR_7g111830 30.205 341 221 6 9 335 5 342 2.23e-44 157
MS.gene30034.t1 MTR_8g006120 32.951 349 225 4 11 356 10 352 1.54e-43 155
MS.gene30034.t1 MTR_1g074120 29.738 343 236 5 7 347 12 351 1.56e-43 154
MS.gene30034.t1 MTR_4g129650 31.579 342 207 9 31 363 28 351 1.95e-43 154
MS.gene30034.t1 MTR_2g016710 30.233 344 226 5 8 340 5 345 5.81e-43 153
MS.gene30034.t1 MTR_1g051120 31.268 355 231 5 7 358 12 356 8.24e-43 152
MS.gene30034.t1 MTR_2g007960 30.372 349 228 6 10 345 11 357 2.71e-42 152
MS.gene30034.t1 MTR_1g023180 31.045 335 208 4 16 329 26 358 3.06e-42 152
MS.gene30034.t1 MTR_2g007990 30.395 329 217 4 8 328 12 336 3.14e-42 152
MS.gene30034.t1 MTR_4g094340 32.317 328 211 4 8 328 6 329 4.29e-42 150
MS.gene30034.t1 MTR_2g102340 32.448 339 216 8 15 347 16 347 5.82e-42 150
MS.gene30034.t1 MTR_4g094340 32.317 328 211 4 8 328 24 347 6.95e-42 150
MS.gene30034.t1 MTR_1g070175 30.029 343 214 6 7 339 12 338 9.35e-42 150
MS.gene30034.t1 MTR_1g030400 30.233 344 231 5 26 361 22 364 1.11e-41 150
MS.gene30034.t1 MTR_1g074070 30.612 343 229 6 7 346 12 348 1.41e-41 149
MS.gene30034.t1 MTR_2g007970 32.036 334 222 3 3 332 4 336 4.53e-41 149
MS.gene30034.t1 MTR_1g114210 29.143 350 226 7 6 345 6 343 7.77e-41 147
MS.gene30034.t1 MTR_3g095440 29.282 362 237 5 9 362 3 353 5.63e-40 145
MS.gene30034.t1 MTR_3g112480 30.606 330 211 4 16 329 25 352 1.21e-39 145
MS.gene30034.t1 MTR_1g073990 30.303 330 227 3 5 332 10 338 1.23e-39 144
MS.gene30034.t1 MTR_2g027030 31.118 331 221 4 3 328 4 332 3.81e-39 143
MS.gene30034.t1 MTR_8g006090 32.827 329 215 4 31 353 31 359 4.75e-39 142
MS.gene30034.t1 MTR_4g094360 29.917 361 239 7 12 361 15 372 2.56e-38 141
MS.gene30034.t1 MTR_1g074020 32.450 302 194 6 36 332 38 334 6.85e-38 139
MS.gene30034.t1 MTR_3g072520 30.368 326 221 4 8 328 6 330 9.40e-38 139
MS.gene30034.t1 MTR_8g092650 30.699 329 215 6 12 330 6 331 1.67e-37 138
MS.gene30034.t1 MTR_5g021160 30.547 311 203 4 22 328 26 327 1.09e-36 136
MS.gene30034.t1 MTR_8g006050 32.237 304 184 6 40 337 23 310 3.65e-36 134
MS.gene30034.t1 MTR_5g025340 29.909 331 213 5 16 329 15 343 4.42e-36 135
MS.gene30034.t1 MTR_4g094340 32.946 258 159 3 77 328 14 263 9.00e-36 132
MS.gene30034.t1 MTR_5g025290 27.635 351 225 7 5 329 25 372 2.44e-35 134
MS.gene30034.t1 MTR_5g025290 28.313 332 217 6 16 329 16 344 4.67e-35 132
MS.gene30034.t1 MTR_4g094362 28.037 321 226 3 12 328 15 334 7.48e-35 132
MS.gene30034.t1 MTR_4g129650 32.061 262 154 7 108 363 1 244 8.64e-35 129
MS.gene30034.t1 MTR_3g112480 31.559 263 165 2 82 329 35 297 9.53e-35 130
MS.gene30034.t1 MTR_5g025370 29.070 344 221 6 16 338 15 356 1.00e-34 131
MS.gene30034.t1 MTR_2g007260 29.545 352 233 5 8 345 11 361 1.86e-34 131
MS.gene30034.t1 MTR_4g094352 29.254 335 214 5 10 328 11 338 2.76e-34 130
MS.gene30034.t1 MTR_1g014790 53.719 121 51 3 89 205 41 160 4.50e-34 125
MS.gene30034.t1 MTR_5g025400 27.887 355 232 7 16 350 16 366 4.57e-34 130
MS.gene30034.t1 MTR_4g094342 28.746 327 217 4 8 323 10 331 6.00e-33 126
MS.gene30034.t1 MTR_2g016710 29.900 301 206 4 8 306 5 302 6.24e-33 125
MS.gene30034.t1 MTR_8g006090 34.694 245 158 2 89 332 10 253 2.10e-32 123
MS.gene30034.t1 MTR_4g094360 29.861 288 192 4 86 364 42 328 3.48e-32 124
MS.gene30034.t1 MTR_5g021160 30.508 236 161 1 96 328 9 244 6.82e-32 121
MS.gene30034.t1 MTR_5g089390 28.754 313 211 6 42 346 43 351 7.25e-32 123
MS.gene30034.t1 MTR_5g025330 29.141 326 210 6 31 337 29 352 9.37e-32 126
MS.gene30034.t1 MTR_1g052205 28.571 259 154 9 115 363 2 239 1.27e-29 114
MS.gene30034.t1 MTR_8g072350 27.628 333 218 7 16 329 14 342 2.20e-29 117
MS.gene30034.t1 MTR_8g006090 32.014 278 187 2 31 306 31 308 3.23e-29 115
MS.gene30034.t1 MTR_8g092650 28.070 228 157 2 110 330 26 253 9.71e-29 112
MS.gene30034.t1 MTR_3g072500 33.333 219 141 3 36 250 45 262 1.15e-28 113
MS.gene30034.t1 MTR_5g069040 25.625 320 230 3 16 328 23 341 9.09e-28 112
MS.gene30034.t1 MTR_5g068790 25.472 318 231 3 16 328 23 339 1.46e-27 112
MS.gene30034.t1 MTR_1g074160 31.349 252 163 6 8 254 10 256 4.50e-27 108
MS.gene30034.t1 MTR_3g019050 26.791 321 221 5 16 328 23 337 7.26e-27 110
MS.gene30034.t1 MTR_4g094360 28.904 301 206 5 12 306 15 313 2.01e-26 107
MS.gene30034.t1 MTR_3g095440 29.644 253 169 4 9 253 3 254 2.05e-26 106
MS.gene30034.t1 MTR_3g112480 29.333 225 145 1 119 329 1 225 1.36e-25 104
MS.gene30034.t1 MTR_5g021160 31.381 239 151 4 22 256 26 255 4.71e-25 103
MS.gene30034.t1 MTR_4g094340 30.888 259 168 4 8 259 6 260 2.24e-23 98.2
MS.gene30034.t1 MTR_4g094340 30.888 259 168 4 8 259 24 278 4.45e-23 97.8
MS.gene30034.t1 MTR_5g012650 26.250 320 210 6 44 348 40 348 1.75e-22 97.4
MS.gene30034.t1 MTR_3g072500 33.714 175 111 3 36 206 45 218 1.94e-22 94.7
MS.gene30034.t1 MTR_8g006090 34.722 216 139 2 31 244 31 246 4.85e-21 92.4
MS.gene30034.t1 MTR_2g102340 30.522 249 162 7 15 255 42 287 7.11e-21 92.4
MS.gene30034.t1 MTR_3g072530 28.063 253 141 7 37 250 40 290 7.12e-21 92.0
MS.gene30034.t1 MTR_1g051120 30.049 203 139 3 7 207 12 213 5.97e-19 84.7
MS.gene30034.t1 MTR_4g100840 25.352 355 237 10 8 348 11 351 2.28e-18 85.5
MS.gene30034.t1 MTR_1g051120 28.448 232 159 4 7 236 12 238 5.05e-18 83.2
MS.gene30034.t1 MTR_4g094340 31.373 204 129 4 8 204 24 223 5.16e-16 76.6
MS.gene30034.t1 MTR_4g094342 33.333 165 108 2 8 171 10 173 1.01e-15 76.6
MS.gene30034.t1 MTR_8g006090 35.032 157 101 1 89 244 10 166 9.85e-15 72.8
MS.gene30034.t1 MTR_4g094348 33.058 121 71 2 96 206 7 127 5.05e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene30034.t1 AT3G28050 56.522 368 144 4 1 355 1 365 5.10e-135 390
MS.gene30034.t1 AT5G40240 51.895 343 159 2 1 338 9 350 8.36e-124 361
MS.gene30034.t1 AT5G40240 51.895 343 159 2 1 338 9 350 8.36e-124 361
MS.gene30034.t1 AT5G40240 50.843 356 164 3 1 351 23 372 3.19e-123 360
MS.gene30034.t1 AT5G40230 51.124 356 163 3 1 351 10 359 6.46e-119 349
MS.gene30034.t1 AT4G15540 49.704 338 161 1 1 338 6 334 1.10e-101 304
MS.gene30034.t1 AT4G15540 49.704 338 161 1 1 338 6 334 1.10e-101 304
MS.gene30034.t1 AT5G40210 45.869 351 173 3 4 353 5 339 4.77e-100 300
MS.gene30034.t1 AT3G28130 48.739 357 165 6 8 356 9 355 6.03e-92 280
MS.gene30034.t1 AT3G28100 49.249 333 154 6 16 338 18 345 7.54e-86 264
MS.gene30034.t1 AT3G28080 46.686 347 173 5 16 356 18 358 1.27e-84 261
MS.gene30034.t1 AT3G28070 46.957 345 174 5 16 356 21 360 1.01e-82 256
MS.gene30034.t1 AT3G28080 44.669 347 172 6 16 356 18 350 5.97e-76 238
MS.gene30034.t1 AT3G28070 46.667 270 135 5 91 356 4 268 4.08e-71 223
MS.gene30034.t1 AT3G28130 46.377 276 134 5 87 356 2 269 2.06e-70 221
MS.gene30034.t1 AT3G28130 46.377 276 134 5 87 356 2 269 2.06e-70 221
MS.gene30034.t1 AT3G28070 47.797 295 149 3 16 306 21 314 5.37e-69 219
MS.gene30034.t1 AT3G28080 45.588 272 136 5 91 356 4 269 1.25e-66 212
MS.gene30034.t1 AT3G28080 45.588 272 136 5 91 356 4 269 1.25e-66 212
MS.gene30034.t1 AT3G28080 45.588 272 136 5 91 356 4 269 1.25e-66 212
MS.gene30034.t1 AT3G28080 45.588 272 136 5 91 356 4 269 1.25e-66 212
MS.gene30034.t1 AT3G28080 41.329 346 139 5 16 356 18 304 7.48e-63 203
MS.gene30034.t1 AT1G70260 35.393 356 217 4 1 345 1 354 1.56e-61 202
MS.gene30034.t1 AT3G28130 49.802 253 119 3 8 254 9 259 5.61e-60 194
MS.gene30034.t1 AT1G60050 34.819 359 216 7 7 348 8 365 2.71e-59 196
MS.gene30034.t1 AT1G21890 35.260 346 210 4 4 337 3 346 8.44e-58 192
MS.gene30034.t1 AT3G28100 47.638 254 125 3 8 255 10 261 1.97e-57 188
MS.gene30034.t1 AT2G39510 33.426 359 233 5 8 363 4 359 2.02e-56 189
MS.gene30034.t1 AT4G08300 33.542 319 203 4 37 350 36 350 8.11e-55 184
MS.gene30034.t1 AT5G07050 34.431 334 200 6 12 331 18 346 2.85e-53 181
MS.gene30034.t1 AT2G37460 35.976 328 204 5 4 328 7 331 3.51e-53 180
MS.gene30034.t1 AT3G30340 35.404 322 191 6 19 329 15 330 1.48e-52 178
MS.gene30034.t1 AT3G28130 43.277 238 121 5 125 356 1 230 1.60e-52 174
MS.gene30034.t1 AT3G28070 42.797 236 126 5 125 356 1 231 3.38e-52 173
MS.gene30034.t1 AT1G44800 34.007 297 193 3 36 330 35 330 1.07e-51 176
MS.gene30034.t1 AT4G08290 32.092 349 232 3 8 352 9 356 1.45e-51 176
MS.gene30034.t1 AT3G28080 42.437 238 125 5 125 356 1 232 9.28e-50 167
MS.gene30034.t1 AT3G28130 51.961 204 91 2 8 206 9 210 2.04e-47 160
MS.gene30034.t1 AT3G28100 51.232 203 92 2 16 213 18 218 5.83e-47 160
MS.gene30034.t1 AT1G21890 33.861 316 195 4 4 307 3 316 1.09e-45 160
MS.gene30034.t1 AT3G56620 33.016 315 206 5 12 325 11 321 2.40e-45 159
MS.gene30034.t1 AT3G28080 38.745 271 102 5 91 356 4 215 9.62e-45 153
MS.gene30034.t1 AT4G30420 31.776 321 214 4 28 343 14 334 1.45e-43 155
MS.gene30034.t1 AT4G30420 31.776 321 214 4 28 343 24 344 1.60e-43 155
MS.gene30034.t1 AT5G13670 32.219 329 215 5 7 329 3 329 6.76e-43 153
MS.gene30034.t1 AT2G40900 33.432 338 208 8 12 345 11 335 8.68e-43 153
MS.gene30034.t1 AT1G09380 30.341 323 218 3 9 325 5 326 1.51e-42 152
MS.gene30034.t1 AT5G64700 31.378 341 221 5 12 343 8 344 1.83e-41 149
MS.gene30034.t1 AT2G37450 32.716 324 195 4 6 328 3 304 2.19e-41 148
MS.gene30034.t1 AT3G18200 30.267 337 230 4 16 350 39 372 9.92e-41 147
MS.gene30034.t1 AT1G75500 30.247 324 214 4 16 329 24 345 8.11e-40 145
MS.gene30034.t1 AT1G75500 30.247 324 214 4 16 329 24 345 8.11e-40 145
MS.gene30034.t1 AT4G01430 29.191 346 235 7 25 364 22 363 1.07e-39 144
MS.gene30034.t1 AT5G45370 30.685 365 221 11 16 355 24 381 1.42e-39 144
MS.gene30034.t1 AT5G45370 30.685 365 221 11 16 355 24 381 1.42e-39 144
MS.gene30034.t1 AT1G68170 30.172 348 235 4 4 344 3 349 1.76e-39 144
MS.gene30034.t1 AT5G45370 30.460 348 220 10 16 355 24 357 2.16e-39 143
MS.gene30034.t1 AT3G53210 32.609 322 203 7 16 329 14 329 5.44e-39 142
MS.gene30034.t1 AT1G68170 30.838 334 225 3 16 344 7 339 1.73e-38 141
MS.gene30034.t1 AT4G28040 31.361 338 206 8 16 344 14 334 2.54e-38 140
MS.gene30034.t1 AT4G28040 31.361 338 206 8 16 344 14 334 2.54e-38 140
MS.gene30034.t1 AT4G28040 31.361 338 206 8 16 344 14 334 2.54e-38 140
MS.gene30034.t1 AT4G28040 31.361 338 206 8 16 344 14 334 2.54e-38 140
MS.gene30034.t1 AT4G28040 31.361 338 206 8 16 344 14 334 2.54e-38 140
MS.gene30034.t1 AT1G01070 29.429 333 225 6 23 346 24 355 1.58e-37 139
MS.gene30034.t1 AT1G11450 29.969 327 210 6 12 328 16 333 9.57e-37 136
MS.gene30034.t1 AT1G43650 30.675 326 222 3 16 340 11 333 1.09e-36 136
MS.gene30034.t1 AT1G11460 29.193 322 220 5 12 328 16 334 9.37e-36 133
MS.gene30034.t1 AT4G01440 26.796 362 249 8 5 356 3 358 5.27e-35 132
MS.gene30034.t1 AT3G53210 33.750 240 149 4 96 329 37 272 1.44e-34 129
MS.gene30034.t1 AT1G25270 29.377 337 225 6 16 344 7 338 2.89e-34 129
MS.gene30034.t1 AT3G30340 35.319 235 135 6 19 242 15 243 6.74e-34 127
MS.gene30034.t1 AT2G37450 35.193 233 149 2 97 328 1 232 7.80e-34 126
MS.gene30034.t1 AT1G11450 30.375 293 185 6 46 328 6 289 1.51e-33 127
MS.gene30034.t1 AT1G11450 30.345 290 183 6 49 328 2 282 6.79e-33 125
MS.gene30034.t1 AT1G01070 28.155 309 214 5 44 346 2 308 1.49e-32 124
MS.gene30034.t1 AT4G08290 32.794 247 161 3 8 250 9 254 1.48e-31 120
MS.gene30034.t1 AT5G45370 31.690 284 164 9 96 355 2 279 1.60e-31 120
MS.gene30034.t1 AT5G45370 31.690 284 164 9 96 355 2 279 1.60e-31 120
MS.gene30034.t1 AT4G01430 30.556 288 193 6 25 306 22 308 1.71e-31 121
MS.gene30034.t1 AT3G18200 30.864 243 167 1 108 350 1 242 3.20e-30 116
MS.gene30034.t1 AT4G01440 26.923 312 215 7 5 309 3 308 1.62e-29 116
MS.gene30034.t1 AT1G11450 31.301 246 152 4 96 332 8 245 1.08e-28 112
MS.gene30034.t1 AT1G11450 28.197 305 200 6 12 306 16 311 2.25e-28 113
MS.gene30034.t1 AT3G45870 25.545 321 224 4 16 323 16 334 3.87e-26 108
MS.gene30034.t1 AT4G19185 26.426 333 222 6 16 329 25 353 4.68e-26 108
MS.gene30034.t1 AT5G64700 31.746 252 162 4 12 254 8 258 1.44e-25 104
MS.gene30034.t1 AT4G01440 30.204 245 158 7 5 242 3 241 6.49e-25 102
MS.gene30034.t1 AT4G19185 26.538 260 170 4 88 329 19 275 8.92e-25 103
MS.gene30034.t1 AT3G53210 34.722 216 127 7 37 244 35 244 1.04e-24 102
MS.gene30034.t1 AT3G28060 42.276 123 69 2 185 306 33 154 3.90e-24 97.4
MS.gene30034.t1 AT2G37450 33.495 206 135 2 124 328 61 265 8.73e-24 100
MS.gene30034.t1 AT4G01440 25.652 230 163 4 111 334 1 228 2.14e-23 98.2
MS.gene30034.t1 AT4G01440 25.652 230 163 4 111 334 1 228 2.14e-23 98.2
MS.gene30034.t1 AT4G24980 26.821 302 150 8 31 329 6 239 6.75e-22 94.4
MS.gene30034.t1 AT3G45870 24.671 304 214 4 16 306 16 317 4.67e-21 92.8
MS.gene30034.t1 AT4G01450 25.078 319 228 4 27 341 25 336 8.87e-21 92.8
MS.gene30034.t1 AT5G45370 29.921 254 148 9 126 355 74 321 9.11e-21 92.0
MS.gene30034.t1 AT4G01450 23.944 284 205 4 27 306 25 301 1.60e-19 89.0
MS.gene30034.t1 AT4G01450 28.922 204 134 4 12 211 10 206 1.60e-19 87.0
MS.gene30034.t1 AT4G01450 28.922 204 134 4 12 211 10 206 1.70e-19 87.4
MS.gene30034.t1 AT5G47470 24.242 330 213 7 37 349 55 364 2.26e-19 88.6
MS.gene30034.t1 AT5G47470 24.316 329 212 7 37 348 83 391 2.61e-19 89.0
MS.gene30034.t1 AT1G43650 31.381 239 160 3 16 253 11 246 4.61e-19 86.3
MS.gene30034.t1 AT3G28070 55.963 109 48 0 16 124 21 129 7.41e-19 84.7
MS.gene30034.t1 AT5G47470 24.281 313 201 6 37 332 83 376 1.74e-18 86.3
MS.gene30034.t1 AT4G01430 25.328 229 164 4 140 364 1 226 7.68e-18 82.0
MS.gene30034.t1 AT3G45870 27.189 217 144 3 16 219 16 231 1.26e-16 79.7
MS.gene30034.t1 AT4G16620 25.321 312 195 8 52 341 50 345 8.11e-16 78.2
MS.gene30034.t1 AT4G16620 23.864 264 166 6 97 341 1 248 8.01e-15 73.9
MS.gene30034.t1 AT4G16620 23.864 264 166 6 97 341 1 248 8.01e-15 73.9
MS.gene30034.t1 AT3G45870 22.619 252 179 3 84 323 12 259 4.69e-13 69.7

Find 84 sgRNAs with CRISPR-Local

Find 211 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATGCAAAATTGGTCTTCT+TGG 0.222542 7.1:-62534188 MS.gene30034:CDS
AAGATCACTGTTAGTTCATT+TGG 0.241737 7.1:+62532116 None:intergenic
TGCATATGTGCTACGTATAA+AGG 0.248399 7.1:-62531862 MS.gene30034:CDS
TACAAGGATTTGGTTCCTTT+TGG 0.276744 7.1:-62534538 MS.gene30034:CDS
AAGGTATTGTTACAAGGATT+TGG 0.296075 7.1:-62534548 MS.gene30034:CDS
CTATGGGAGTTGTGTTCCTT+GGG 0.307563 7.1:-62531788 MS.gene30034:CDS
AAACCAATACTATGCAAAAT+TGG 0.339357 7.1:-62534197 MS.gene30034:CDS
GCTATGGGAGTTGTGTTCCT+TGG 0.340738 7.1:-62531789 MS.gene30034:CDS
AGTATATATTAGTTCCCTTA+TGG 0.340842 7.1:-62532277 MS.gene30034:CDS
GGAGCCACAATAATATCAAT+TGG 0.341846 7.1:-62531118 MS.gene30034:CDS
AATGCAAGTGCATGGAAAAT+AGG 0.350999 7.1:-62532035 MS.gene30034:CDS
TGGTAGAGTACAAAAGAAAA+TGG 0.351289 7.1:-62530987 MS.gene30034:CDS
TATGCAAAATTGGTCTTCTT+GGG 0.365472 7.1:-62534187 MS.gene30034:CDS
CAGAAGTTCATCTCAGATCA+TGG 0.367144 7.1:-62534058 MS.gene30034:CDS
AATTGTCATTGCTGTGGCTA+TGG 0.375954 7.1:-62531805 MS.gene30034:CDS
TGCTCCTGATATAGATACTA+TGG 0.377453 7.1:+62532427 None:intergenic
GCATATGTGCTACGTATAAA+GGG 0.394947 7.1:-62531861 MS.gene30034:CDS
TTGGTCTTCTTGGGTTGATC+GGG 0.412468 7.1:-62534178 MS.gene30034:intron
TCTCAGATCATGGGTTATAC+AGG 0.434580 7.1:-62534048 MS.gene30034:CDS
CATAGTATTGGTTTACTAAG+AGG 0.434696 7.1:+62534206 None:intergenic
GATCTAAGAGCAATAATGAT+TGG 0.442396 7.1:+62532377 None:intergenic
GGTACCATAGTATCTATATC+AGG 0.442799 7.1:-62532431 MS.gene30034:CDS
TATACTCAGCTGTAAGTAGA+AGG 0.445774 7.1:+62532294 None:intergenic
ATTGGTCTTCTTGGGTTGAT+CGG 0.449307 7.1:-62534179 MS.gene30034:CDS
TACTAACCTTGTGGAGATGA+AGG 0.451898 7.1:+62534381 None:intergenic
CTCTTGCAAAGCTATGAAAC+TGG 0.456875 7.1:-62531007 MS.gene30034:CDS
AATCATCATCAGATCAAAGC+TGG 0.457498 7.1:-62532328 MS.gene30034:CDS
ATTGTCATTGCTGTGGCTAT+GGG 0.457527 7.1:-62531804 MS.gene30034:CDS
GAGCCACAATAATATCAATT+GGG 0.460525 7.1:-62531117 MS.gene30034:CDS
TTCCTCAGCAATCAGCAACT+TGG 0.463341 7.1:-62534001 MS.gene30034:CDS
TACCTGTACAATGTACCATA+AGG 0.465976 7.1:+62532262 None:intergenic
TTCAAAGCTGCTACCGTGAA+AGG 0.466620 7.1:-62534469 MS.gene30034:CDS
GGCATTAAGGTATTGTTACA+AGG 0.489064 7.1:-62534554 MS.gene30034:CDS
TCCCTTATGGTACATTGTAC+AGG 0.496069 7.1:-62532264 MS.gene30034:intron
AAGAAGAAACCTGAAAATGA+TGG 0.507022 7.1:+62533954 None:intergenic
ATGGTAACTCATTCCTTTCA+CGG 0.511389 7.1:+62534456 None:intergenic
ACCTGTACAATGTACCATAA+GGG 0.513397 7.1:+62532263 None:intergenic
AGCATTATAGCTGGAATTGT+AGG 0.513970 7.1:-62532074 MS.gene30034:CDS
TCAGATCAAAGCTGGGCCAT+TGG 0.519930 7.1:-62532320 MS.gene30034:CDS
ATGGTAACCATCAAACCAAA+AGG 0.520460 7.1:+62534523 None:intergenic
GGGATACTCTCCACCTTGGA+AGG 0.520551 7.1:-62531767 MS.gene30034:intron
GTTTCATAGCTTTGCAAGAG+AGG 0.524077 7.1:+62531010 None:intergenic
ACTTGCTTCCATCCTTTGCT+CGG 0.525985 7.1:-62532000 MS.gene30034:intron
GATCAAAGCTGGGCCATTGG+TGG 0.532344 7.1:-62532317 MS.gene30034:CDS
AAGTAGTCAAGCCAAGGTGG+TGG 0.543714 7.1:-62532453 MS.gene30034:CDS
AAACCCAATTGATATTATTG+TGG 0.543749 7.1:+62531114 None:intergenic
TCTACAGGTTCAAATTATGA+AGG 0.549298 7.1:-62532144 MS.gene30034:intron
CAGCTATAATGCTTACACAT+AGG 0.549528 7.1:+62532084 None:intergenic
CTATGTGTAAGCATTATAGC+TGG 0.553567 7.1:-62532083 MS.gene30034:CDS
CTTGGGGATACTCTCCACCT+TGG 0.559205 7.1:-62531771 MS.gene30034:CDS
AGAAGTTCATCTCAGATCAT+GGG 0.564341 7.1:-62534057 MS.gene30034:CDS
CTTGTGGAGATGAAGGGTGC+TGG 0.565297 7.1:+62534388 None:intergenic
GCAAGCAAGAAGGTAAAAGC+TGG 0.569611 7.1:+62533976 None:intergenic
GAAAATGATGGCAAGCAAGA+AGG 0.569755 7.1:+62533966 None:intergenic
TCATCCTACCGAGCAAAGGA+TGG 0.574014 7.1:+62531992 None:intergenic
GTAAATCATAGTACCTTCCA+AGG 0.577444 7.1:+62531754 None:intergenic
ACTAACCTTGTGGAGATGAA+GGG 0.578351 7.1:+62534382 None:intergenic
GTGAGCCAAATGCAAGTGCA+TGG 0.578354 7.1:-62532043 MS.gene30034:CDS
CTGATTGCTGAGGAAAGAGT+AGG 0.587131 7.1:+62534009 None:intergenic
TACTATGGTACCCACCACCT+TGG 0.588212 7.1:+62532442 None:intergenic
ATGTTCATCCTACCGAGCAA+AGG 0.592131 7.1:+62531988 None:intergenic
ATCATCATCAGATCAAAGCT+GGG 0.596636 7.1:-62532327 MS.gene30034:CDS
AGCAACGTTGATGCATTCCA+TGG 0.599026 7.1:+62534504 None:intergenic
GAGGTGGTTGAAGATGTCTC+TGG 0.600990 7.1:-62531061 MS.gene30034:CDS
TATGGGAGTTGTGTTCCTTG+GGG 0.604835 7.1:-62531787 MS.gene30034:CDS
AGTATTGGTTTACTAAGAGG+AGG 0.609608 7.1:+62534209 None:intergenic
TTTATAGTGACACTATACAT+AGG 0.612426 7.1:-62532404 MS.gene30034:CDS
CTAAGAGCAATAATGATTGG+CGG 0.618454 7.1:+62532380 None:intergenic
AAGTTTAAGTAGTCAAGCCA+AGG 0.623683 7.1:-62532459 MS.gene30034:CDS
TGTAAGTAGAAGGCCACCAA+TGG 0.628370 7.1:+62532304 None:intergenic
CAGCACCCTTCATCTCCACA+AGG 0.628610 7.1:-62534387 MS.gene30034:intron
AGTAGTCAAGCCAAGGTGGT+GGG 0.631238 7.1:-62532452 MS.gene30034:CDS
CACCAAGTTGCTGATTGCTG+AGG 0.637146 7.1:+62533999 None:intergenic
CATATGTGCTACGTATAAAG+GGG 0.638887 7.1:-62531860 MS.gene30034:CDS
GGGTAAAGCAAAAGAAGAGG+TGG 0.640628 7.1:-62531077 MS.gene30034:CDS
TGGAGATGAAGGGTGCTGGA+AGG 0.648947 7.1:+62534392 None:intergenic
GTGGGGTAAAGCAAAAGAAG+AGG 0.660709 7.1:-62531080 MS.gene30034:CDS
ACTCTCAATTGTCATTGCTG+TGG 0.661857 7.1:-62531811 MS.gene30034:CDS
TTTAAGTAGTCAAGCCAAGG+TGG 0.670840 7.1:-62532456 MS.gene30034:CDS
ACAGCAATGACAATTGAGAG+TGG 0.674965 7.1:+62531813 None:intergenic
AATCATAGTACCTTCCAAGG+TGG 0.690246 7.1:+62531757 None:intergenic
CAAGGTGGAGAGTATCCCCA+AGG 0.691065 7.1:+62531772 None:intergenic
AAGCATAAACAACAAAGACA+TGG 0.700920 7.1:+62534437 None:intergenic
ATATGTGCTACGTATAAAGG+GGG 0.701724 7.1:-62531859 MS.gene30034:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTTAAAAATATATA+TGG + chr7.1:62532804-62532823 None:intergenic 0.0%
!! TTTAAAAATATATATGGAAA+AGG + chr7.1:62532798-62532817 None:intergenic 10.0%
!!! ATATTTTTATATTCGAAATT+GGG - chr7.1:62532020-62532039 MS.gene30034:CDS 10.0%
!!! TAAATTTTACTAAACAATAT+AGG + chr7.1:62532001-62532020 None:intergenic 10.0%
!!! TATATTTTTATATTCGAAAT+TGG - chr7.1:62532019-62532038 MS.gene30034:CDS 10.0%
!!! TTTTCTAAAAACATTTTTAA+AGG - chr7.1:62532874-62532893 MS.gene30034:intron 10.0%
!! AAAAAAAAAATTAGTAGTCA+CGG - chr7.1:62531174-62531193 MS.gene30034:intron 15.0%
!! AAACAAACATATATAAAGAA+CGG + chr7.1:62532538-62532557 None:intergenic 15.0%
!! TTATACAATTCATATGATTA+GGG - chr7.1:62533611-62533630 MS.gene30034:intron 15.0%
!! TTCTTTATATATGTTTGTTT+AGG - chr7.1:62532538-62532557 MS.gene30034:intron 15.0%
!! TTTATACAATTCATATGATT+AGG - chr7.1:62533610-62533629 MS.gene30034:intron 15.0%
!!! AAATTTTCTTTATAATCTAC+AGG - chr7.1:62533370-62533389 MS.gene30034:intron 15.0%
!!! TTCAATTGATTAATGATTTT+CGG - chr7.1:62533896-62533915 MS.gene30034:intron 15.0%
!!! TTCTAATTTTATTGTTTTTG+TGG - chr7.1:62531875-62531894 MS.gene30034:CDS 15.0%
!! AAATTAAATTGTCCTTGAAA+AGG - chr7.1:62532932-62532951 MS.gene30034:intron 20.0%
!! AACAAACATATATAAAGAAC+GGG + chr7.1:62532537-62532556 None:intergenic 20.0%
!! ACCAAAAATTAATATTTGAC+TGG - chr7.1:62534126-62534145 MS.gene30034:intron 20.0%
!! CAAATTAACTCCTTAAATAA+TGG + chr7.1:62531914-62531933 None:intergenic 20.0%
!! CATTATTTAAGGAGTTAATT+TGG - chr7.1:62531912-62531931 MS.gene30034:intron 20.0%
!! CTTATGACAAAAATAAGAAT+CGG - chr7.1:62532841-62532860 MS.gene30034:intron 20.0%
!! TAAGAATAGACCATTATTTA+AGG - chr7.1:62531901-62531920 MS.gene30034:intron 20.0%
!! TTGAAAATGACAATTAACAT+AGG + chr7.1:62531768-62531787 None:intergenic 20.0%
!! TTTATATATGTTTGTTTAGG+TGG - chr7.1:62532541-62532560 MS.gene30034:intron 20.0%
!!! CAATTGAGAATTGAATATTT+TGG + chr7.1:62533800-62533819 None:intergenic 20.0%
!!! TCCAGTCAAATATTAATTTT+TGG + chr7.1:62534130-62534149 None:intergenic 20.0%
!!! TTTATTTTGCAATTTTAGTG+TGG - chr7.1:62531428-62531447 MS.gene30034:intron 20.0%
!!! TTTTCAATTTGGAAATGTTT+TGG + chr7.1:62532080-62532099 None:intergenic 20.0%
!!! TTTTGTCAACTTAGTAAAAA+TGG - chr7.1:62531693-62531712 MS.gene30034:intron 20.0%
! AAAAACTTAGGCAAAATTGT+TGG + chr7.1:62532234-62532253 None:intergenic 25.0%
! AAACCAATACTATGCAAAAT+TGG - chr7.1:62531332-62531351 MS.gene30034:intron 25.0%
! AAACCCAATTGATATTATTG+TGG + chr7.1:62534418-62534437 None:intergenic 25.0%
! AGTATATATTAGTTCCCTTA+TGG - chr7.1:62533252-62533271 MS.gene30034:intron 25.0%
! ATAACATAGTTCCGTAAAAA+TGG + chr7.1:62531967-62531986 None:intergenic 25.0%
! ATCTTTACTAAGACTTTACT+TGG - chr7.1:62534153-62534172 MS.gene30034:intron 25.0%
! TAACATAGTTCCGTAAAAAT+GGG + chr7.1:62531966-62531985 None:intergenic 25.0%
! TGGTTAATTCACAAATTCAA+GGG + chr7.1:62532060-62532079 None:intergenic 25.0%
! TTAATTAAGGATGGAAAAAG+TGG - chr7.1:62533040-62533059 MS.gene30034:intron 25.0%
! TTGGTTAATTCACAAATTCA+AGG + chr7.1:62532061-62532080 None:intergenic 25.0%
! TTTATAGTGACACTATACAT+AGG - chr7.1:62533125-62533144 MS.gene30034:intron 25.0%
! TTTATATTCGAAATTGGGAA+TGG - chr7.1:62532025-62532044 MS.gene30034:CDS 25.0%
!! GACAATTTAATTTCTTGTGT+GGG + chr7.1:62532925-62532944 None:intergenic 25.0%
!! TCATATGATTAGGGAATTTT+TGG - chr7.1:62533620-62533639 MS.gene30034:intron 25.0%
!! TTGATCAACGATTTTCAATT+TGG + chr7.1:62532091-62532110 None:intergenic 25.0%
!!! CATGATTTCCTTTGTTTTTT+AGG + chr7.1:62531667-62531686 None:intergenic 25.0%
!!! GACATTTTAATCAGTGTATA+TGG - chr7.1:62532584-62532603 MS.gene30034:intron 25.0%
!!! TACAAACTCATTTTAGTTCT+TGG - chr7.1:62533342-62533361 MS.gene30034:intron 25.0%
!!! TCATATTTCATTTTTCCTGT+TGG - chr7.1:62533016-62533035 MS.gene30034:intron 25.0%
!!! TTTTCCTGTTGGTTTAATTA+AGG - chr7.1:62533027-62533046 MS.gene30034:intron 25.0%
AAGAAGAAACCTGAAAATGA+TGG + chr7.1:62531578-62531597 None:intergenic 30.0%
AAGATCACTGTTAGTTCATT+TGG + chr7.1:62533416-62533435 None:intergenic 30.0%
AAGCATAAACAACAAAGACA+TGG + chr7.1:62531095-62531114 None:intergenic 30.0%
AGTATAAGACCCTTGAATTT+GGG + chr7.1:62532169-62532188 None:intergenic 30.0%
ATGTAATTTGACCTTAGTTG+AGG + chr7.1:62534099-62534118 None:intergenic 30.0%
CATTAATCACATGAGTTCAA+CGG + chr7.1:62534074-62534093 None:intergenic 30.0%
CTACGTTGAATACAAATGTT+TGG - chr7.1:62533873-62533892 MS.gene30034:intron 30.0%
CTATGACAATTCAATGAGTT+TGG - chr7.1:62532715-62532734 MS.gene30034:intron 30.0%
GAGACGATGTAAAAAGTTTA+GGG + chr7.1:62531205-62531224 None:intergenic 30.0%
GAGCCACAATAATATCAATT+GGG - chr7.1:62534412-62534431 MS.gene30034:CDS 30.0%
GATCTAAGAGCAATAATGAT+TGG + chr7.1:62533155-62533174 None:intergenic 30.0%
GGATGAACATGAAATAATAC+AGG - chr7.1:62533554-62533573 MS.gene30034:intron 30.0%
GGTTAATTCACAAATTCAAG+GGG + chr7.1:62532059-62532078 None:intergenic 30.0%
TAGTATAAGACCCTTGAATT+TGG + chr7.1:62532170-62532189 None:intergenic 30.0%
TCTACAGGTTCAAATTATGA+AGG - chr7.1:62533385-62533404 MS.gene30034:intron 30.0%
TGAGACGATGTAAAAAGTTT+AGG + chr7.1:62531206-62531225 None:intergenic 30.0%
TGATCGAACTCTAAATTAGT+CGG - chr7.1:62534180-62534199 MS.gene30034:CDS 30.0%
TGGTAGAGTACAAAAGAAAA+TGG - chr7.1:62534542-62534561 MS.gene30034:CDS 30.0%
! ACACCATTGATGCTTTTATT+AGG + chr7.1:62532684-62532703 None:intergenic 30.0%
! AGACCAATTTTGCATAGTAT+TGG + chr7.1:62531338-62531357 None:intergenic 30.0%
! CTTTTATTAGGATCTACATG+TGG + chr7.1:62532672-62532691 None:intergenic 30.0%
! GGACAATTTAATTTCTTGTG+TGG + chr7.1:62532926-62532945 None:intergenic 30.0%
! TGTTTATAGCTACCTTTTCA+AGG + chr7.1:62532947-62532966 None:intergenic 30.0%
!! AAGGTATTGTTACAAGGATT+TGG - chr7.1:62530981-62531000 MS.gene30034:CDS 30.0%
!! CATAGTATTGGTTTACTAAG+AGG + chr7.1:62531326-62531345 None:intergenic 30.0%
!! GATCCTAATAAAAGCATCAA+TGG - chr7.1:62532678-62532697 MS.gene30034:intron 30.0%
!! TATGCAAAATTGGTCTTCTT+GGG - chr7.1:62531342-62531361 MS.gene30034:intron 30.0%
!! TGGGTTTTATACAGTAATGT+GGG - chr7.1:62534431-62534450 MS.gene30034:CDS 30.0%
!! TTGGGTTTTATACAGTAATG+TGG - chr7.1:62534430-62534449 MS.gene30034:CDS 30.0%
!!! TTTTTTCTCTACTAACCTTG+TGG + chr7.1:62531160-62531179 None:intergenic 30.0%
AAAACCGTTTCTCATGAGAA+CGG - chr7.1:62534016-62534035 MS.gene30034:CDS 35.0%
AAGTTTAAGTAGTCAAGCCA+AGG - chr7.1:62533070-62533089 MS.gene30034:intron 35.0%
AATATCTTGCGATAAAGCTG+AGG + chr7.1:62532642-62532661 None:intergenic 35.0%
AATCATCATCAGATCAAAGC+TGG - chr7.1:62533201-62533220 MS.gene30034:intron 35.0%
AATGCAAGTGCATGGAAAAT+AGG - chr7.1:62533494-62533513 MS.gene30034:intron 35.0%
ACCTGTACAATGTACCATAA+GGG + chr7.1:62533269-62533288 None:intergenic 35.0%
AGAAGTTCATCTCAGATCAT+GGG - chr7.1:62531472-62531491 MS.gene30034:intron 35.0%
AGCATTATAGCTGGAATTGT+AGG - chr7.1:62533455-62533474 MS.gene30034:intron 35.0%
AGTCTGGTAAATGATTGTTC+TGG + chr7.1:62533964-62533983 None:intergenic 35.0%
ATATGTGCTACGTATAAAGG+GGG - chr7.1:62533670-62533689 MS.gene30034:intron 35.0%
ATCATCATCAGATCAAAGCT+GGG - chr7.1:62533202-62533221 MS.gene30034:intron 35.0%
ATGCTAAGAATACTCGTTAG+GGG + chr7.1:62532512-62532531 None:intergenic 35.0%
ATGGTAACCATCAAACCAAA+AGG + chr7.1:62531009-62531028 None:intergenic 35.0%
ATGGTAACTCATTCCTTTCA+CGG + chr7.1:62531076-62531095 None:intergenic 35.0%
CAGCTATAATGCTTACACAT+AGG + chr7.1:62533448-62533467 None:intergenic 35.0%
CATATGTGCTACGTATAAAG+GGG - chr7.1:62533669-62533688 MS.gene30034:intron 35.0%
CATGCTAAGAATACTCGTTA+GGG + chr7.1:62532513-62532532 None:intergenic 35.0%
CCATCCTTAATTAAACCAAC+AGG + chr7.1:62533034-62533053 None:intergenic 35.0%
CGGAGATTGTTGAATCAATA+GGG - chr7.1:62533916-62533935 MS.gene30034:intron 35.0%
CTAAGAGCAATAATGATTGG+CGG + chr7.1:62533152-62533171 None:intergenic 35.0%
CTATGTGTAAGCATTATAGC+TGG - chr7.1:62533446-62533465 MS.gene30034:intron 35.0%
CTCTTAACCTTTCGATTCAT+CGG + chr7.1:62534218-62534237 None:intergenic 35.0%
GAACTGACTGAATAACTGTT+TGG + chr7.1:62534287-62534306 None:intergenic 35.0%
GAGTTCAGCCTAAAAAACAA+AGG - chr7.1:62531656-62531675 MS.gene30034:intron 35.0%
GCAAAATTGTTGGAGTAATG+TGG + chr7.1:62532224-62532243 None:intergenic 35.0%
GCATATGTGCTACGTATAAA+GGG - chr7.1:62533668-62533687 MS.gene30034:intron 35.0%
GGAGCCACAATAATATCAAT+TGG - chr7.1:62534411-62534430 MS.gene30034:CDS 35.0%
GGTACCATAGTATCTATATC+AGG - chr7.1:62533098-62533117 MS.gene30034:intron 35.0%
GTAAATCATAGTACCTTCCA+AGG + chr7.1:62533778-62533797 None:intergenic 35.0%
TACCTGTACAATGTACCATA+AGG + chr7.1:62533270-62533289 None:intergenic 35.0%
TATACTCAGCTGTAAGTAGA+AGG + chr7.1:62533238-62533257 None:intergenic 35.0%
TCATGCTAAGAATACTCGTT+AGG + chr7.1:62532514-62532533 None:intergenic 35.0%
TCGAAATTGGGAATGGATAA+AGG - chr7.1:62532032-62532051 MS.gene30034:CDS 35.0%
TCGGAGATTGTTGAATCAAT+AGG - chr7.1:62533915-62533934 MS.gene30034:intron 35.0%
TGATTAATGAGCCTCAACTA+AGG - chr7.1:62534085-62534104 MS.gene30034:intron 35.0%
TGCATATGTGCTACGTATAA+AGG - chr7.1:62533667-62533686 MS.gene30034:intron 35.0%
TGCTCCTGATATAGATACTA+TGG + chr7.1:62533105-62533124 None:intergenic 35.0%
! AACTGTTTGGAACTCTTGAA+GGG + chr7.1:62534274-62534293 None:intergenic 35.0%
! ATTTTCCATGCACTTGCATT+TGG + chr7.1:62533494-62533513 None:intergenic 35.0%
! GCATCAATGGTGTTAGAATA+AGG - chr7.1:62532691-62532710 MS.gene30034:intron 35.0%
! TAACTGTTTGGAACTCTTGA+AGG + chr7.1:62534275-62534294 None:intergenic 35.0%
!! AAACGGTTTTGATAATCCAG+GGG + chr7.1:62534006-62534025 None:intergenic 35.0%
!! ACCATTTTTGCCCAAATTCA+AGG - chr7.1:62532156-62532175 MS.gene30034:intron 35.0%
!! AGAAACGGTTTTGATAATCC+AGG + chr7.1:62534008-62534027 None:intergenic 35.0%
!! AGTATTGGTTTACTAAGAGG+AGG + chr7.1:62531323-62531342 None:intergenic 35.0%
!! CCATTTTTGCCCAAATTCAA+GGG - chr7.1:62532157-62532176 MS.gene30034:intron 35.0%
!! CCTGTTGGTTTAATTAAGGA+TGG - chr7.1:62533031-62533050 MS.gene30034:intron 35.0%
!! CTATGCAAAATTGGTCTTCT+TGG - chr7.1:62531341-62531360 MS.gene30034:intron 35.0%
!! GAAACGGTTTTGATAATCCA+GGG + chr7.1:62534007-62534026 None:intergenic 35.0%
!! GGCATTAAGGTATTGTTACA+AGG - chr7.1:62530975-62530994 MS.gene30034:CDS 35.0%
!! GGGTTTTATACAGTAATGTG+GGG - chr7.1:62534432-62534451 MS.gene30034:CDS 35.0%
!! GTTTGTTTAGGTGGATTGAT+AGG - chr7.1:62532550-62532569 MS.gene30034:intron 35.0%
!! TACAAGGATTTGGTTCCTTT+TGG - chr7.1:62530991-62531010 MS.gene30034:CDS 35.0%
!! TCCATCTATGCCCATTTTTA+CGG - chr7.1:62531953-62531972 MS.gene30034:intron 35.0%
!! TGTGCTTTTTGCAGTGTAAT+TGG - chr7.1:62534390-62534409 MS.gene30034:CDS 35.0%
!!! TTTGGTTCCTTTTGGTTTGA+TGG - chr7.1:62530999-62531018 MS.gene30034:CDS 35.0%
!!! TTTTGGTTTGATGGTTACCA+TGG - chr7.1:62531008-62531027 MS.gene30034:CDS 35.0%
AATCATAGTACCTTCCAAGG+TGG + chr7.1:62533775-62533794 None:intergenic 40.0%
AATTCAATGAGTTTGGCCTC+TGG - chr7.1:62532722-62532741 MS.gene30034:intron 40.0%
AATTGTCATTGCTGTGGCTA+TGG - chr7.1:62533724-62533743 MS.gene30034:intron 40.0%
AATTGTTGGAGTAATGTGGC+TGG + chr7.1:62532220-62532239 None:intergenic 40.0%
ACAGCAATGACAATTGAGAG+TGG + chr7.1:62533719-62533738 None:intergenic 40.0%
ACTAACCTTGTGGAGATGAA+GGG + chr7.1:62531150-62531169 None:intergenic 40.0%
ACTCTCAATTGTCATTGCTG+TGG - chr7.1:62533718-62533737 MS.gene30034:intron 40.0%
ATTGTCATTGCTGTGGCTAT+GGG - chr7.1:62533725-62533744 MS.gene30034:intron 40.0%
ATTTCCTCCGATGAATCGAA+AGG - chr7.1:62534208-62534227 MS.gene30034:CDS 40.0%
CAAACTCCAAATAATGTGGC+TGG + chr7.1:62532135-62532154 None:intergenic 40.0%
CAGAAGTTCATCTCAGATCA+TGG - chr7.1:62531471-62531490 MS.gene30034:intron 40.0%
CCCTTGAATTTGGGCAAAAA+TGG + chr7.1:62532160-62532179 None:intergenic 40.0%
CTCTTGCAAAGCTATGAAAC+TGG - chr7.1:62534522-62534541 MS.gene30034:CDS 40.0%
GAAAATGATGGCAAGCAAGA+AGG + chr7.1:62531566-62531585 None:intergenic 40.0%
GGTCCAAACTCCAAATAATG+TGG + chr7.1:62532139-62532158 None:intergenic 40.0%
TACTAACCTTGTGGAGATGA+AGG + chr7.1:62531151-62531170 None:intergenic 40.0%
TCCCTTATGGTACATTGTAC+AGG - chr7.1:62533265-62533284 MS.gene30034:intron 40.0%
TCCGTAAAAATGGGCATAGA+TGG + chr7.1:62531957-62531976 None:intergenic 40.0%
TTAACCTTTCGATTCATCGG+AGG + chr7.1:62534215-62534234 None:intergenic 40.0%
TTTAAGTAGTCAAGCCAAGG+TGG - chr7.1:62533073-62533092 MS.gene30034:intron 40.0%
! CAGCCACATTATTTGGAGTT+TGG - chr7.1:62532133-62532152 MS.gene30034:CDS 40.0%
! GGTAAATGATTGTTCTGGCT+AGG + chr7.1:62533959-62533978 None:intergenic 40.0%
! GTTTCATAGCTTTGCAAGAG+AGG + chr7.1:62534522-62534541 None:intergenic 40.0%
! TCTCAGATCATGGGTTATAC+AGG - chr7.1:62531481-62531500 MS.gene30034:intron 40.0%
! TCTTGCTTGCCATCATTTTC+AGG - chr7.1:62531566-62531585 MS.gene30034:intron 40.0%
!! ATTGGTCTTCTTGGGTTGAT+CGG - chr7.1:62531350-62531369 MS.gene30034:intron 40.0%
ACTTGCTTCCATCCTTTGCT+CGG - chr7.1:62533529-62533548 MS.gene30034:intron 45.0%
AGCAACGTTGATGCATTCCA+TGG + chr7.1:62531028-62531047 None:intergenic 45.0%
ATGTTCATCCTACCGAGCAA+AGG + chr7.1:62533544-62533563 None:intergenic 45.0%
CTACCACTGGACTACACTTT+CGG - chr7.1:62531229-62531248 MS.gene30034:intron 45.0%
CTATGGGAGTTGTGTTCCTT+GGG - chr7.1:62533741-62533760 MS.gene30034:intron 45.0%
CTGATTGCTGAGGAAAGAGT+AGG + chr7.1:62531523-62531542 None:intergenic 45.0%
GCAAGCAAGAAGGTAAAAGC+TGG + chr7.1:62531556-62531575 None:intergenic 45.0%
GGGTAAAGCAAAAGAAGAGG+TGG - chr7.1:62534452-62534471 MS.gene30034:CDS 45.0%
GTCACAAGGCAAGTAAAGTC+TGG + chr7.1:62533980-62533999 None:intergenic 45.0%
GTGGGGTAAAGCAAAAGAAG+AGG - chr7.1:62534449-62534468 MS.gene30034:CDS 45.0%
TATGGGAGTTGTGTTCCTTG+GGG - chr7.1:62533742-62533761 MS.gene30034:intron 45.0%
TGATAGAGCCGTGAACTAGA+CGG + chr7.1:62532750-62532769 None:intergenic 45.0%
TGTAAGTAGAAGGCCACCAA+TGG + chr7.1:62533228-62533247 None:intergenic 45.0%
TTCAAAGCTGCTACCGTGAA+AGG - chr7.1:62531060-62531079 MS.gene30034:CDS 45.0%
TTCCTCAGCAATCAGCAACT+TGG - chr7.1:62531528-62531547 MS.gene30034:intron 45.0%
!! GGTTTTGATAATCCAGGGGT+CGG + chr7.1:62534002-62534021 None:intergenic 45.0%
!! TTGGTCTTCTTGGGTTGATC+GGG - chr7.1:62531351-62531370 MS.gene30034:intron 45.0%
!! AAAAAAAAAAAAAAAAACTT+AGG + chr7.1:62532246-62532265 None:intergenic 5.0%
AAGTAGTCAAGCCAAGGTGG+TGG - chr7.1:62533076-62533095 MS.gene30034:intron 50.0%
ACCGTTTCTCATGAGAACGG+AGG - chr7.1:62534019-62534038 MS.gene30034:CDS 50.0%
AGTAGTCAAGCCAAGGTGGT+GGG - chr7.1:62533077-62533096 MS.gene30034:intron 50.0%
CATCGTCTCAACTCTACCAC+TGG - chr7.1:62531216-62531235 MS.gene30034:intron 50.0%
CCAACACATGCTTGCACATG+AGG + chr7.1:62531637-62531656 None:intergenic 50.0%
CCCTCCGTTCTCATGAGAAA+CGG + chr7.1:62534023-62534042 None:intergenic 50.0%
CCGTTTCTCATGAGAACGGA+GGG - chr7.1:62534020-62534039 MS.gene30034:CDS 50.0%
CCTCATGTGCAAGCATGTGT+TGG - chr7.1:62531634-62531653 MS.gene30034:intron 50.0%
CGTGTGCCAGCCACATTATT+TGG - chr7.1:62532126-62532145 MS.gene30034:CDS 50.0%
GAGGTGGTTGAAGATGTCTC+TGG - chr7.1:62534468-62534487 MS.gene30034:CDS 50.0%
GATAGAGCCGTGAACTAGAC+GGG + chr7.1:62532749-62532768 None:intergenic 50.0%
GCTATGGGAGTTGTGTTCCT+TGG - chr7.1:62533740-62533759 MS.gene30034:intron 50.0%
GTGAGCCAAATGCAAGTGCA+TGG - chr7.1:62533486-62533505 MS.gene30034:intron 50.0%
TACTATGGTACCCACCACCT+TGG + chr7.1:62533090-62533109 None:intergenic 50.0%
TCAGATCAAAGCTGGGCCAT+TGG - chr7.1:62533209-62533228 MS.gene30034:intron 50.0%
TCATCCTACCGAGCAAAGGA+TGG + chr7.1:62533540-62533559 None:intergenic 50.0%
! AGTCCGAAAGTGTAGTCCAG+TGG + chr7.1:62531235-62531254 None:intergenic 50.0%
! CACCAAGTTGCTGATTGCTG+AGG + chr7.1:62531533-62531552 None:intergenic 50.0%
AATGTGGCTGGCACACGCAA+AGG + chr7.1:62532123-62532142 None:intergenic 55.0%
CAGCACCCTTCATCTCCACA+AGG - chr7.1:62531142-62531161 MS.gene30034:intron 55.0%
CTTGGGGATACTCTCCACCT+TGG - chr7.1:62533758-62533777 MS.gene30034:intron 55.0%
GATCAAAGCTGGGCCATTGG+TGG - chr7.1:62533212-62533231 MS.gene30034:intron 55.0%
GCTTCCATCCTTTGCTCGGT+AGG - chr7.1:62533533-62533552 MS.gene30034:intron 55.0%
GGGATACTCTCCACCTTGGA+AGG - chr7.1:62533762-62533781 MS.gene30034:intron 55.0%
TAATCCAGGGGTCGGTCACA+AGG + chr7.1:62533994-62534013 None:intergenic 55.0%
TAATGTGGCTGGCACACGCA+AGG + chr7.1:62532124-62532143 None:intergenic 55.0%
! CTCTGGACCCGTCTAGTTCA+CGG - chr7.1:62532739-62532758 MS.gene30034:intron 55.0%
! CTTGTGGAGATGAAGGGTGC+TGG + chr7.1:62531144-62531163 None:intergenic 55.0%
!! CAAGGTGGAGAGTATCCCCA+AGG + chr7.1:62533760-62533779 None:intergenic 55.0%
!! TGGAGATGAAGGGTGCTGGA+AGG + chr7.1:62531140-62531159 None:intergenic 55.0%
CGTGAACTAGACGGGTCCAG+AGG + chr7.1:62532741-62532760 None:intergenic 60.0%
CTTGCCTTGTGACCGACCCC+TGG - chr7.1:62533987-62534006 MS.gene30034:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 62530973 62534578 62530973 ID=MS.gene30034
chr7.1 mRNA 62530973 62534578 62530973 ID=MS.gene30034.t1;Parent=MS.gene30034
chr7.1 exon 62534388 62534578 62534388 ID=MS.gene30034.t1.exon1;Parent=MS.gene30034.t1
chr7.1 CDS 62534388 62534578 62534388 ID=cds.MS.gene30034.t1;Parent=MS.gene30034.t1
chr7.1 exon 62534179 62534244 62534179 ID=MS.gene30034.t1.exon2;Parent=MS.gene30034.t1
chr7.1 CDS 62534179 62534244 62534179 ID=cds.MS.gene30034.t1;Parent=MS.gene30034.t1
chr7.1 exon 62533964 62534077 62533964 ID=MS.gene30034.t1.exon3;Parent=MS.gene30034.t1
chr7.1 CDS 62533964 62534077 62533964 ID=cds.MS.gene30034.t1;Parent=MS.gene30034.t1
chr7.1 exon 62532265 62532502 62532265 ID=MS.gene30034.t1.exon4;Parent=MS.gene30034.t1
chr7.1 CDS 62532265 62532502 62532265 ID=cds.MS.gene30034.t1;Parent=MS.gene30034.t1
chr7.1 exon 62532001 62532159 62532001 ID=MS.gene30034.t1.exon5;Parent=MS.gene30034.t1
chr7.1 CDS 62532001 62532159 62532001 ID=cds.MS.gene30034.t1;Parent=MS.gene30034.t1
chr7.1 exon 62531768 62531919 62531768 ID=MS.gene30034.t1.exon6;Parent=MS.gene30034.t1
chr7.1 CDS 62531768 62531919 62531768 ID=cds.MS.gene30034.t1;Parent=MS.gene30034.t1
chr7.1 exon 62530973 62531147 62530973 ID=MS.gene30034.t1.exon7;Parent=MS.gene30034.t1
chr7.1 CDS 62530973 62531147 62530973 ID=cds.MS.gene30034.t1;Parent=MS.gene30034.t1
Gene Sequence

>MS.gene30034

ATGGCATTAAGGTATTGTTACAAGGATTTGGTTCCTTTTGGTTTGATGGTTACCATGGAATGCATCAACGTTGCTTTGAATACTTTGTTCAAAGCTGCTACCGTGAAAGGAATGAGTTACCATGTCTTTGTTGTTTATGCTTATGCTGTTGCTGCTTTTGTTCTCCTTCCAGCACCCTTCATCTCCACAAGGTTAGTAGAGAAAAAAAAAATTAGTAGTCACGGTCGAACCCTAAACTTTTTACATCGTCTCAACTCTACCACTGGACTACACTTTCGGACTAAACTAGTCATGTTGAATTTGAATTGTTTGATTTTGTCTCTTCTCTTTGCAGATCAAGAGTGCTTCCTCCTCTTAGTAAACCAATACTATGCAAAATTGGTCTTCTTGGGTTGATCGGGTACAAAGTTAAAAGTCAAATGATTAATTAATTTTTTACAAATTTTTAGTGTTTATTTATTTTGCAATTTTAGTGTGGTATGTTTTGTTTTAATTTTGCAGAAGTTCATCTCAGATCATGGGTTATACAGGTATTAGTTATAGTTCTCCTACTCTTTCCTCAGCAATCAGCAACTTGGTGCCAGCTTTTACCTTCTTGCTTGCCATCATTTTCAGGTTTCTTCTTATTTTGTTATTTTACTACTAGTAATTTCTAAGTAATCCTCATGTGCAAGCATGTGTTGGAGTTCAGCCTAAAAAACAAAGGAAATCATGATTTTTTTTTGTCAACTTAGTAAAAATGGCAAACAAACACTGCACACACACTATAAAATGACAATATTTGTGATCACTCCTATGTTAATTGTCATTTTCAATATTGTTCTAAAATTTAAAATAAAATAAAATAAATATTGTTCTAAAATAATTGTCATTTTCAATATAATAAAATTAATTGTTTTTGCTTCTAATTTTATTGTTTTTGTGGTCATAAGAATAGACCATTATTTAAGGAGTTAATTTGGTAAAGTTGTTATTTTTTTTCCATCTATGCCCATTTTTACGGAACTATGTTATTTGATTTTCAACCTATATTGTTTAGTAAAATTTATATTTTTATATTCGAAATTGGGAATGGATAAAGGACCCCTTGAATTTGTGAATTAACCAAAACATTTCCAAATTGAAAATCGTTGATCAATATATATTGACCTTGCGTGTGCCAGCCACATTATTTGGAGTTTGGACCATTTTTGCCCAAATTCAAGGGTCTTATACTAAGTTCAAGATATTGACCTTTGCGTGTGCCAGCCACATTACTCCAACAATTTTGCCTAAGTTTTTTTTTTTTTTTTTTTTATACTCTAATTTTTATCATTTTAGTTGAAAAAGATCTACAACACAGACTAATCGTAAAAAAGATGAAAGTCATACATAATACAATCATTTTATCGTTGAATTCTTTATAAAAAATGTTAACAAGTATTTTAACGACATTCGTTAATAAATTCAAAGAATAACTTTATTTTAAGAATGATGTATTCAATATATTGAAACTTTGAAACATTTTGTATAAAACTTAAATTATTTTATTTTAAACCCCTAACGAGTATTCTTAGCATGACCCGTTCTTTATATATGTTTGTTTAGGTGGATTGATAGGTTTGCGTAACAGACATTTTAATCAGTGTATATGGTCTATCTCTTTGCTTAGACATTTTAAGAAAATCCTCAGCTTTATCGCAAGATATTTATATCTCCACATGTAGATCCTAATAAAAGCATCAATGGTGTTAGAATAAGGACTATGACAATTCAATGAGTTTGGCCTCTGGACCCGTCTAGTTCACGGCTCTATCAATTATATGTGCTCGTATTTTCTTGTCCTTTTCCATATATATTTTTAAAATAAAATAATGACGTATTATGTACTTATGACAAAAATAAGAATCGGACATATATTATTTTCTAAAAACATTTTTAAAGGAAATTATTATTCAGTTAGATGAGTACCCACACAAGAAATTAAATTGTCCTTGAAAAGGTAGCTATAAACAGCTTATTTATAAATAAATTTGTACATAAACTCTCTTATTGTGTATTAATTCATATTTCATTTTTCCTGTTGGTTTAATTAAGGATGGAAAAAGTGGCTATAAAAAGTTTAAGTAGTCAAGCCAAGGTGGTGGGTACCATAGTATCTATATCAGGAGCATTTATAGTGACACTATACATAGGACCGCCAATCATTATTGCTCTTAGATCTTCAAATTCACTTCATCAAACTCTTAAATCATCATCAGATCAAAGCTGGGCCATTGGTGGCCTTCTACTTACAGCTGAGTATATATTAGTTCCCTTATGGTACATTGTACAGGTACAAATTTGTTGATTACTAATATATATGTATAAGCTTCTAACTAATTAACAATTACAAACTCATTTTAGTTCTTGGTTCACAAATTTTCTTTATAATCTACAGGTTCAAATTATGAAGGTGTATCCAAATGAACTAACAGTGATCTTCTATTACAACCTATGTGTAAGCATTATAGCTGGAATTGTAGGTGTGATTAGTGAGCCAAATGCAAGTGCATGGAAAATAGGACTTGATACATCACTTGCTTCCATCCTTTGCTCGGTAGGATGAACATGAAATAATACAGGAGTTTAATCTAAAATTACATTTACTAATTATAATTTATACAATTCATATGATTAGGGAATTTTTGGATCATTCTTGAACAATACAGTTCATGCATATGTGCTACGTATAAAGGGGGCTGTATATGTTGCAATGTTCAAACCACTCTCAATTGTCATTGCTGTGGCTATGGGAGTTGTGTTCCTTGGGGATACTCTCCACCTTGGAAGGTACTATGATTTACCAAAATATTCAATTCTCAATTGTAAATCACATGTTCATTCAATTTTTCACTAATCTTTTCACTTTAAAAAGCTAACTACGTTGAATACAAATGTTTGGTTCAATTGATTAATGATTTTCGGAGATTGTTGAATCAATAGGGAGTCTTTGAGTTCAAAGCCTAGCCAGAACAATCATTTACCAGACTTTACTTGCCTTGTGACCGACCCCTGGATTATCAAAACCGTTTCTCATGAGAACGGAGGGTCAAGACAGAAAAATATATTTAATAAAGCCGTTGAACTCATGTGATTAATGAGCCTCAACTAAGGTCAAATTACATAAAAAGTACCAAAAATTAATATTTGACTGGAACAATCTTTACTAAGACTTTACTTGGTTCTTGATCGAACTCTAAATTAGTCGGTCTCTATTTCCTCCGATGAATCGAAAGGTTAAGAGAACAAAAATAATTGCTAGCTATATTCATGATATCCCTTCAAGAGTTCCAAACAGTTATTCAGTCAGTTCATCTATCAATTAGTACTTACACTTCTAAAAGAGAGACAAAAAAAGATTTAGTTTGTTGCGCTGCTAATGTTTTAAAATTCATTTGTGCTTTTTGCAGTGTAATTGGAGCCACAATAATATCAATTGGGTTTTATACAGTAATGTGGGGTAAAGCAAAAGAAGAGGTGGTTGAAGATGTCTCTGGCGACGAAACACAAACTACACAGACTGTTCCTCTCTTGCAAAGCTATGAAACTGGTAGAGTACAAAAGAAAATGGATGTAAATGTATAA
Protein sequence

>MS.gene30034.t1

MALRYCYKDLVPFGLMVTMECINVALNTLFKAATVKGMSYHVFVVYAYAVAAFVLLPAPFISTRSRVLPPLSKPILCKIGLLGLIGSSSQIMGYTGISYSSPTLSSAISNLVPAFTFLLAIIFRMEKVAIKSLSSQAKVVGTIVSISGAFIVTLYIGPPIIIALRSSNSLHQTLKSSSDQSWAIGGLLLTAEYILVPLWYIVQVQIMKVYPNELTVIFYYNLCVSIIAGIVGVISEPNASAWKIGLDTSLASILCSGIFGSFLNNTVHAYVLRIKGAVYVAMFKPLSIVIAVAMGVVFLGDTLHLGSVIGATIISIGFYTVMWGKAKEEVVEDVSGDETQTTQTVPLLQSYETGRVQKKMDVNV