Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017151.t1 | XP_003617477.2 | 88.5 | 157 | 18 | 0 | 1 | 157 | 1 | 157 | 1.10E-69 | 273.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017151.t1 | Q9PV94 | 57.4 | 148 | 59 | 2 | 1 | 147 | 1 | 145 | 4.3e-38 | 159.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017151.t1 | G7K3F8 | 88.5 | 157 | 18 | 0 | 1 | 157 | 1 | 157 | 8.0e-70 | 273.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene045227 | MS.gene017151 | PPI |
| MS.gene017151 | MS.gene75567 | PPI |
| MS.gene067039 | MS.gene017151 | PPI |
| MS.gene017151 | MS.gene79126 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017151.t1 | MTR_5g092010 | 96.441 | 281 | 5 | 1 | 1 | 281 | 1 | 276 | 1.40e-179 | 495 |
| MS.gene017151.t1 | MTR_8g080090 | 93.678 | 174 | 6 | 2 | 1 | 173 | 1 | 170 | 6.48e-93 | 276 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017151.t1 | AT5G44500 | 85.526 | 152 | 22 | 0 | 1 | 152 | 1 | 152 | 1.23e-90 | 269 |
| MS.gene017151.t1 | AT5G44500 | 85.526 | 152 | 22 | 0 | 1 | 152 | 1 | 152 | 1.23e-90 | 269 |
| MS.gene017151.t1 | AT4G20440 | 89.474 | 152 | 15 | 1 | 1 | 152 | 1 | 151 | 9.33e-83 | 249 |
| MS.gene017151.t1 | AT4G20440 | 89.474 | 152 | 15 | 1 | 1 | 152 | 1 | 151 | 9.33e-83 | 249 |
| MS.gene017151.t1 | AT4G20440 | 89.474 | 152 | 15 | 1 | 1 | 152 | 1 | 151 | 9.33e-83 | 249 |
| MS.gene017151.t1 | AT4G20440 | 89.474 | 152 | 15 | 1 | 1 | 152 | 1 | 151 | 9.33e-83 | 249 |
| MS.gene017151.t1 | AT4G20440 | 89.474 | 152 | 15 | 1 | 1 | 152 | 1 | 151 | 9.33e-83 | 249 |
Find 143 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTATGCCGCCGGGGCAATT+TGG | 0.120570 | 5.3:-73999753 | MS.gene017151:CDS |
| GGAAGTGGTGTTCCGGTTTA+TGG | 0.187174 | 5.3:-73999567 | MS.gene017151:CDS |
| ATTGATGTATTGAAGCATTT+TGG | 0.205199 | 5.3:+74000310 | None:intergenic |
| CACTGTTGCTGCTGTTGATT+TGG | 0.210852 | 5.3:+73999507 | None:intergenic |
| CTATGCCGCCGGGGCAATTT+GGG | 0.264839 | 5.3:-73999752 | MS.gene017151:CDS |
| TGCTGTTGATTTGGAGCATT+TGG | 0.292429 | 5.3:+73999516 | None:intergenic |
| CAAGCTCAGCCTGGTCTTGC+TGG | 0.294341 | 5.3:-73999960 | MS.gene017151:CDS |
| GGTATGCCACCTCCTCAGTA+TGG | 0.303881 | 5.3:-73999699 | MS.gene017151:CDS |
| TCCTCCTGGAAGTGGTGTTC+CGG | 0.346552 | 5.3:-73999574 | MS.gene017151:CDS |
| ACTCGGTTTGGTTCTACTTC+GGG | 0.350273 | 5.3:-74000123 | MS.gene017151:CDS |
| TGCAGCAGCACTTACAGCTT+TGG | 0.369249 | 5.3:+74000043 | None:intergenic |
| GGTGGTCCTCCTCCGCAATT+TGG | 0.372572 | 5.3:-73999720 | MS.gene017151:CDS |
| CCAGGAGGAGGAGGCATTCC+AGG | 0.379156 | 5.3:+73999588 | None:intergenic |
| CCTCCTGGTCAGATGGTTAG+AGG | 0.388518 | 5.3:-73999654 | MS.gene017151:CDS |
| TCAACTTGTCGGAAAATTCA+TGG | 0.388812 | 5.3:-74000255 | MS.gene017151:CDS |
| CCAGGCTGAGCTTGAATAAC+CGG | 0.392249 | 5.3:+73999969 | None:intergenic |
| CGAGGCGGTGGCTGCATTCC+AGG | 0.395962 | 5.3:+73999612 | None:intergenic |
| CCTGGAATGCCTCCTCCTCC+TGG | 0.401308 | 5.3:-73999588 | MS.gene017151:CDS |
| TGTCCAGGATGTCCAGGATA+TGG | 0.405313 | 5.3:+73999810 | None:intergenic |
| CGAGTGTGCGGCGGTCTTCA+CGG | 0.406911 | 5.3:+74000141 | None:intergenic |
| TGACCAGGCGGACGCATAAC+CGG | 0.411010 | 5.3:+73999852 | None:intergenic |
| TCAGTATGGGCAGAGACCTA+TGG | 0.417999 | 5.3:-73999685 | MS.gene017151:CDS |
| GCAATGGCTGGTCCTGGAAT+TGG | 0.421320 | 5.3:-74000023 | MS.gene017151:CDS |
| CCTGCAGCACGACCAATTCC+AGG | 0.425807 | 5.3:+74000011 | None:intergenic |
| CGACAAGTTGACGACCGTCT+TGG | 0.426215 | 5.3:+74000267 | None:intergenic |
| CACTCGGTTTGGTTCTACTT+CGG | 0.427788 | 5.3:-74000124 | MS.gene017151:CDS |
| ATGCCATATCCTGGACATCC+TGG | 0.445798 | 5.3:-73999813 | MS.gene017151:CDS |
| CCAAATTGCCCCGGCGGCAT+AGG | 0.449138 | 5.3:+73999753 | None:intergenic |
| CCCACCTCCTCCTGGTCAGA+TGG | 0.451634 | 5.3:-73999661 | MS.gene017151:CDS |
| CGCCACATGAATCTTGTTCT+CGG | 0.452233 | 5.3:-74000224 | MS.gene017151:CDS |
| GTAAGTGCTGCTGCAATGGC+TGG | 0.452971 | 5.3:-74000035 | MS.gene017151:CDS |
| ATGCAGCCACCGCCTCGTCC+TGG | 0.453454 | 5.3:-73999606 | MS.gene017151:CDS |
| GGAGGAGGCATGCCAGGCCG+AGG | 0.453758 | 5.3:+73999540 | None:intergenic |
| CCTCCTGCTCCTCCTCGTCC+TGG | 0.453758 | 5.3:-73999630 | MS.gene017151:CDS |
| GCTGCTGCAATGGCTGGTCC+TGG | 0.455757 | 5.3:-74000029 | MS.gene017151:CDS |
| AGACCGCCGCACACTCGGTT+TGG | 0.455844 | 5.3:-74000135 | MS.gene017151:CDS |
| TTTGGTGGAGGAGGCATGCC+AGG | 0.462102 | 5.3:+73999534 | None:intergenic |
| GTTGTTTCGATGACAGTTGA+AGG | 0.465323 | 5.3:-74000092 | MS.gene017151:CDS |
| GGCCGAGGTGGACCATAAAC+CGG | 0.466333 | 5.3:+73999555 | None:intergenic |
| GGCATTCCAGGACGAGGCGG+TGG | 0.470062 | 5.3:+73999600 | None:intergenic |
| GAACGAGATTCCTCCGGTGG+TGG | 0.470828 | 5.3:+74000065 | None:intergenic |
| CCACCGCCTCCTATGCCGCC+GGG | 0.471646 | 5.3:-73999762 | MS.gene017151:CDS |
| ACCATCTGACCAGGAGGAGG+TGG | 0.471852 | 5.3:+73999660 | None:intergenic |
| CGAGATTCCTCCGGTGGTGG+AGG | 0.477225 | 5.3:+74000068 | None:intergenic |
| CAAGACGGTCGTCAACTTGT+CGG | 0.478808 | 5.3:-74000266 | MS.gene017151:CDS |
| GGTGTAGGTGGACCTGCTCC+TGG | 0.479069 | 5.3:-73999927 | MS.gene017151:CDS |
| GCACCACCAGGATATGATAC+TGG | 0.479978 | 5.3:+73999876 | None:intergenic |
| GCTGGTCCTGTTCGTGGTGT+AGG | 0.480465 | 5.3:-73999942 | MS.gene017151:CDS |
| GGTCTTGCTGGTCCTGTTCG+TGG | 0.480513 | 5.3:-73999948 | MS.gene017151:CDS |
| TCGAAAACTTCCACCGGCGA+AGG | 0.481236 | 5.3:-74000186 | MS.gene017151:CDS |
| GTTTATGGTCCACCTCGGCC+TGG | 0.481603 | 5.3:-73999552 | MS.gene017151:CDS |
| CCTGGAATTGGTCGTGCTGC+AGG | 0.486165 | 5.3:-74000011 | MS.gene017151:CDS |
| ATCATATCCTGGTGGTGCTC+CGG | 0.486386 | 5.3:-73999871 | MS.gene017151:CDS |
| ATTGGTCGTGCTGCAGGTAG+AGG | 0.488956 | 5.3:-74000005 | MS.gene017151:CDS |
| TAAACCGGAACACCACTTCC+AGG | 0.492870 | 5.3:+73999570 | None:intergenic |
| GGCATACCAAATTGCGGAGG+AGG | 0.492946 | 5.3:+73999714 | None:intergenic |
| TCCACCGCCTCCTATGCCGC+CGG | 0.493463 | 5.3:-73999763 | MS.gene017151:CDS |
| GCTCCGGTTATGCGTCCGCC+TGG | 0.493981 | 5.3:-73999855 | MS.gene017151:CDS |
| ATTCCAGGACGAGGAGGAGC+AGG | 0.494294 | 5.3:+73999627 | None:intergenic |
| CTCTGCCCATACTGAGGAGG+TGG | 0.494871 | 5.3:+73999693 | None:intergenic |
| ATGCCTCCTCCTCCTGGAAG+TGG | 0.499579 | 5.3:-73999582 | MS.gene017151:CDS |
| CCTATGGGCCCACCTCCTCC+TGG | 0.499583 | 5.3:-73999669 | MS.gene017151:CDS |
| GGTCCACCTACACCACGAAC+AGG | 0.501617 | 5.3:+73999936 | None:intergenic |
| GTTATGCGTCCGCCTGGTCA+AGG | 0.502014 | 5.3:-73999849 | MS.gene017151:CDS |
| CCAGGAGGAGGTGGGCCCAT+AGG | 0.503981 | 5.3:+73999669 | None:intergenic |
| GGGCAATTTGGGCAGAGACC+AGG | 0.504430 | 5.3:-73999741 | MS.gene017151:CDS |
| TTTGGAGCATTTGGTGGAGG+AGG | 0.507736 | 5.3:+73999525 | None:intergenic |
| CGTGAAGACCGCCGCACACT+CGG | 0.516055 | 5.3:-74000140 | MS.gene017151:CDS |
| GTCTTCACGGTCGCCGTCGG+TGG | 0.516113 | 5.3:+74000154 | None:intergenic |
| AATTGCCCCGGCGGCATAGG+AGG | 0.518983 | 5.3:+73999756 | None:intergenic |
| GTATGCCACCTCCTCAGTAT+GGG | 0.520179 | 5.3:-73999698 | MS.gene017151:CDS |
| CAGTATGGGCAGAGACCTAT+GGG | 0.520524 | 5.3:-73999684 | MS.gene017151:CDS |
| TGCCCCGGCGGCATAGGAGG+CGG | 0.521351 | 5.3:+73999759 | None:intergenic |
| CCGGTTATTCAAGCTCAGCC+TGG | 0.521861 | 5.3:-73999969 | MS.gene017151:CDS |
| ATCTGCGGTGGACCTTGTCC+AGG | 0.522039 | 5.3:+73999795 | None:intergenic |
| CCTGGTCAAATGCCATATCC+TGG | 0.523384 | 5.3:-73999822 | MS.gene017151:CDS |
| AGCTGTAAGTGCTGCTGCAA+TGG | 0.528749 | 5.3:-74000039 | MS.gene017151:CDS |
| GGACCTTGTCCAGGATGTCC+AGG | 0.530197 | 5.3:+73999804 | None:intergenic |
| TGACCAGGTGGACCTTGACC+AGG | 0.530553 | 5.3:+73999837 | None:intergenic |
| CGCATAACCGGAGCACCACC+AGG | 0.532565 | 5.3:+73999864 | None:intergenic |
| TGATTTGGAGCATTTGGTGG+AGG | 0.533563 | 5.3:+73999522 | None:intergenic |
| CCAGGATATGGCATTTGACC+AGG | 0.535882 | 5.3:+73999822 | None:intergenic |
| TGTTGATTTGGAGCATTTGG+TGG | 0.537037 | 5.3:+73999519 | None:intergenic |
| GGCTGCATCATACCAGGAGC+AGG | 0.537879 | 5.3:+73999915 | None:intergenic |
| CGTCCGCCAGTATCATATCC+TGG | 0.538133 | 5.3:-73999882 | MS.gene017151:CDS |
| AAGGTCCACCGCAGATGGTG+AGG | 0.541082 | 5.3:-73999788 | MS.gene017151:CDS |
| GGAGGAGGCATTCCAGGACG+AGG | 0.543227 | 5.3:+73999594 | None:intergenic |
| CTCGGTTTGGTTCTACTTCG+GGG | 0.543292 | 5.3:-74000122 | MS.gene017151:CDS |
| CGAAAACTTCCACCGGCGAA+GGG | 0.547258 | 5.3:-74000185 | MS.gene017151:CDS |
| GCGGTCTTCACGGTCGCCGT+CGG | 0.552395 | 5.3:+74000151 | None:intergenic |
| TGGACAAGGTCCACCGCAGA+TGG | 0.555676 | 5.3:-73999793 | MS.gene017151:CDS |
| CCCGGCGGCATAGGAGGCGG+TGG | 0.555943 | 5.3:+73999762 | None:intergenic |
| ATCTGCGGCTGCATCATACC+AGG | 0.556260 | 5.3:+73999909 | None:intergenic |
| CCGCCTGGTCAAGGTCCACC+TGG | 0.556675 | 5.3:-73999840 | MS.gene017151:CDS |
| GGAGGCATGCCAGGCCGAGG+TGG | 0.567307 | 5.3:+73999543 | None:intergenic |
| CGAACAGGACCAGCAAGACC+AGG | 0.568021 | 5.3:+73999951 | None:intergenic |
| TTCCGGTTTATGGTCCACCT+CGG | 0.570223 | 5.3:-73999557 | MS.gene017151:CDS |
| AGTTGAAGGTCCTCCACCAC+CGG | 0.570304 | 5.3:-74000078 | MS.gene017151:CDS |
| TGCAGGTAGAGGTATTCCTC+CGG | 0.570514 | 5.3:-73999994 | MS.gene017151:CDS |
| TGAGCTTGAATAACCGGCGC+CGG | 0.578220 | 5.3:+73999975 | None:intergenic |
| ACACCACTTCCAGGAGGAGG+AGG | 0.578227 | 5.3:+73999579 | None:intergenic |
| GGACCCCTCACCATCTGCGG+TGG | 0.578400 | 5.3:+73999783 | None:intergenic |
| TTGGAACGAGATTCCTCCGG+TGG | 0.588436 | 5.3:+74000062 | None:intergenic |
| TAGAGGTATTCCTCCGGCGC+CGG | 0.590446 | 5.3:-73999988 | MS.gene017151:CDS |
| CTCTGCCCAAATTGCCCCGG+CGG | 0.590935 | 5.3:+73999747 | None:intergenic |
| AATTGCGGAGGAGGACCACC+TGG | 0.591266 | 5.3:+73999723 | None:intergenic |
| GGTCCTGTTCGTGGTGTAGG+TGG | 0.591284 | 5.3:-73999939 | MS.gene017151:CDS |
| CTAACCATCTGACCAGGAGG+AGG | 0.594137 | 5.3:+73999657 | None:intergenic |
| CCAGGACGAGGAGGAGCAGG+AGG | 0.595102 | 5.3:+73999630 | None:intergenic |
| GCTTTGGAACGAGATTCCTC+CGG | 0.595135 | 5.3:+74000059 | None:intergenic |
| AGGTCCACCGCAGATGGTGA+GGG | 0.597838 | 5.3:-73999787 | MS.gene017151:CDS |
| AGAGTTTCGAAAACTTCCAC+CGG | 0.602174 | 5.3:-74000192 | MS.gene017151:CDS |
| GGTCTCTGCCCAAATTGCCC+CGG | 0.603588 | 5.3:+73999744 | None:intergenic |
| GGTGGCTGCATTCCAGGACG+AGG | 0.605433 | 5.3:+73999618 | None:intergenic |
| CACCGCCTCCTATGCCGCCG+GGG | 0.606476 | 5.3:-73999761 | MS.gene017151:CDS |
| GGCTGCATTCCAGGACGAGG+AGG | 0.614859 | 5.3:+73999621 | None:intergenic |
| GGTGGACCCCTCACCATCTG+CGG | 0.614870 | 5.3:+73999780 | None:intergenic |
| CAATTTGGGCAGAGACCAGG+TGG | 0.620080 | 5.3:-73999738 | MS.gene017151:CDS |
| GGTCCTCTAACCATCTGACC+AGG | 0.622862 | 5.3:+73999651 | None:intergenic |
| GGAACACCACTTCCAGGAGG+AGG | 0.623836 | 5.3:+73999576 | None:intergenic |
| GGTCCACCGCAGATGGTGAG+GGG | 0.627488 | 5.3:-73999786 | MS.gene017151:CDS |
| CCATCTGACCAGGAGGAGGT+GGG | 0.631940 | 5.3:+73999661 | None:intergenic |
| GTAGAACCAAACCGAGTGTG+CGG | 0.635167 | 5.3:+74000129 | None:intergenic |
| GCTTGAATAACCGGCGCCGG+AGG | 0.636298 | 5.3:+73999978 | None:intergenic |
| TATCCTGGACATCCTGGACA+AGG | 0.636817 | 5.3:-73999807 | MS.gene017151:CDS |
| GGAGGCATTCCAGGACGAGG+CGG | 0.646005 | 5.3:+73999597 | None:intergenic |
| TGAAGGTCCTCCACCACCGG+AGG | 0.647929 | 5.3:-74000075 | MS.gene017151:CDS |
| GGATATGGCATTTGACCAGG+TGG | 0.660601 | 5.3:+73999825 | None:intergenic |
| GGTCTCTGCCCATACTGAGG+AGG | 0.662332 | 5.3:+73999690 | None:intergenic |
| ACTGGCGGACGCGAAATCTG+CGG | 0.665825 | 5.3:+73999894 | None:intergenic |
| ATAGGTCTCTGCCCATACTG+AGG | 0.666393 | 5.3:+73999687 | None:intergenic |
| CGAGAACAAGATTCATGTGG+CGG | 0.667753 | 5.3:+74000225 | None:intergenic |
| CGCCGAGAACAAGATTCATG+TGG | 0.676790 | 5.3:+74000222 | None:intergenic |
| GGAGGTGGCATACCAAATTG+CGG | 0.683306 | 5.3:+73999708 | None:intergenic |
| AAGGGTAAGAAAACCACCGA+CGG | 0.686452 | 5.3:-74000167 | MS.gene017151:CDS |
| CCTCTAACCATCTGACCAGG+AGG | 0.688741 | 5.3:+73999654 | None:intergenic |
| CCAGGTGGACCTTGACCAGG+CGG | 0.694084 | 5.3:+73999840 | None:intergenic |
| GAACCAAACCGAGTGTGCGG+CGG | 0.694201 | 5.3:+74000132 | None:intergenic |
| CCACCAGGATATGATACTGG+CGG | 0.702997 | 5.3:+73999879 | None:intergenic |
| GGTGGCATACCAAATTGCGG+AGG | 0.706492 | 5.3:+73999711 | None:intergenic |
| ATGCGAGTAACAATCCAAGA+CGG | 0.723721 | 5.3:-74000281 | MS.gene017151:CDS |
| ACCGGAACACCACTTCCAGG+AGG | 0.726433 | 5.3:+73999573 | None:intergenic |
| CCGCCAGTATCATATCCTGG+TGG | 0.734163 | 5.3:-73999879 | MS.gene017151:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTGATGTATTGAAGCATTT+TGG | + | chr5.3:73999528-73999547 | None:intergenic | 25.0% |
| TCAACTTGTCGGAAAATTCA+TGG | - | chr5.3:73999580-73999599 | MS.gene017151:CDS | 35.0% | |
| AGAGTTTCGAAAACTTCCAC+CGG | - | chr5.3:73999643-73999662 | MS.gene017151:CDS | 40.0% | |
| ATGCGAGTAACAATCCAAGA+CGG | - | chr5.3:73999554-73999573 | MS.gene017151:CDS | 40.0% | |
| ! | GTTGTTTCGATGACAGTTGA+AGG | - | chr5.3:73999743-73999762 | MS.gene017151:CDS | 40.0% |
| !! | TGCTGTTGATTTGGAGCATT+TGG | + | chr5.3:74000322-74000341 | None:intergenic | 40.0% |
| !! | TGTTGATTTGGAGCATTTGG+TGG | + | chr5.3:74000319-74000338 | None:intergenic | 40.0% |
| AAGGGTAAGAAAACCACCGA+CGG | - | chr5.3:73999668-73999687 | MS.gene017151:CDS | 45.0% | |
| CGAGAACAAGATTCATGTGG+CGG | + | chr5.3:73999613-73999632 | None:intergenic | 45.0% | |
| CGCCACATGAATCTTGTTCT+CGG | - | chr5.3:73999611-73999630 | MS.gene017151:CDS | 45.0% | |
| ! | CACTGTTGCTGCTGTTGATT+TGG | + | chr5.3:74000331-74000350 | None:intergenic | 45.0% |
| ! | TGATTTGGAGCATTTGGTGG+AGG | + | chr5.3:74000316-74000335 | None:intergenic | 45.0% |
| !! | ACTCGGTTTGGTTCTACTTC+GGG | - | chr5.3:73999712-73999731 | MS.gene017151:CDS | 45.0% |
| !! | CACTCGGTTTGGTTCTACTT+CGG | - | chr5.3:73999711-73999730 | MS.gene017151:CDS | 45.0% |
| ATAGGTCTCTGCCCATACTG+AGG | + | chr5.3:74000151-74000170 | None:intergenic | 50.0% | |
| ATGCCATATCCTGGACATCC+TGG | - | chr5.3:74000022-74000041 | MS.gene017151:CDS | 50.0% | |
| CAAGACGGTCGTCAACTTGT+CGG | - | chr5.3:73999569-73999588 | MS.gene017151:CDS | 50.0% | |
| CAGTATGGGCAGAGACCTAT+GGG | - | chr5.3:74000151-74000170 | MS.gene017151:CDS | 50.0% | |
| CCACCAGGATATGATACTGG+CGG | + | chr5.3:73999959-73999978 | None:intergenic | 50.0% | |
| CCAGGATATGGCATTTGACC+AGG | + | chr5.3:74000016-74000035 | None:intergenic | 50.0% | |
| CCAGGCTGAGCTTGAATAAC+CGG | + | chr5.3:73999869-73999888 | None:intergenic | 50.0% | |
| CCTGGTCAAATGCCATATCC+TGG | - | chr5.3:74000013-74000032 | MS.gene017151:CDS | 50.0% | |
| CGCCGAGAACAAGATTCATG+TGG | + | chr5.3:73999616-73999635 | None:intergenic | 50.0% | |
| GCACCACCAGGATATGATAC+TGG | + | chr5.3:73999962-73999981 | None:intergenic | 50.0% | |
| GGAAGTGGTGTTCCGGTTTA+TGG | - | chr5.3:74000268-74000287 | MS.gene017151:CDS | 50.0% | |
| GGAGGTGGCATACCAAATTG+CGG | + | chr5.3:74000130-74000149 | None:intergenic | 50.0% | |
| GGATATGGCATTTGACCAGG+TGG | + | chr5.3:74000013-74000032 | None:intergenic | 50.0% | |
| GTAGAACCAAACCGAGTGTG+CGG | + | chr5.3:73999709-73999728 | None:intergenic | 50.0% | |
| GTATGCCACCTCCTCAGTAT+GGG | - | chr5.3:74000137-74000156 | MS.gene017151:CDS | 50.0% | |
| TAAACCGGAACACCACTTCC+AGG | + | chr5.3:74000268-74000287 | None:intergenic | 50.0% | |
| TATCCTGGACATCCTGGACA+AGG | - | chr5.3:74000028-74000047 | MS.gene017151:CDS | 50.0% | |
| TCAGTATGGGCAGAGACCTA+TGG | - | chr5.3:74000150-74000169 | MS.gene017151:CDS | 50.0% | |
| TGCAGCAGCACTTACAGCTT+TGG | + | chr5.3:73999795-73999814 | None:intergenic | 50.0% | |
| TGTCCAGGATGTCCAGGATA+TGG | + | chr5.3:74000028-74000047 | None:intergenic | 50.0% | |
| TTCCGGTTTATGGTCCACCT+CGG | - | chr5.3:74000278-74000297 | MS.gene017151:CDS | 50.0% | |
| ! | AGCTGTAAGTGCTGCTGCAA+TGG | - | chr5.3:73999796-73999815 | MS.gene017151:CDS | 50.0% |
| ! | ATCATATCCTGGTGGTGCTC+CGG | - | chr5.3:73999964-73999983 | MS.gene017151:CDS | 50.0% |
| ! | GTGGTTTTCTTACCCTTCGC+CGG | + | chr5.3:73999665-73999684 | None:intergenic | 50.0% |
| ! | TTTGGAGCATTTGGTGGAGG+AGG | + | chr5.3:74000313-74000332 | None:intergenic | 50.0% |
| !! | CTCGGTTTGGTTCTACTTCG+GGG | - | chr5.3:73999713-73999732 | MS.gene017151:CDS | 50.0% |
| !! | GCTTTGGAACGAGATTCCTC+CGG | + | chr5.3:73999779-73999798 | None:intergenic | 50.0% |
| !! | TGCAGGTAGAGGTATTCCTC+CGG | - | chr5.3:73999841-73999860 | MS.gene017151:CDS | 50.0% |
| AGTTGAAGGTCCTCCACCAC+CGG | - | chr5.3:73999757-73999776 | MS.gene017151:CDS | 55.0% | |
| ATCTGCGGCTGCATCATACC+AGG | + | chr5.3:73999929-73999948 | None:intergenic | 55.0% | |
| ATTGGTCGTGCTGCAGGTAG+AGG | - | chr5.3:73999830-73999849 | MS.gene017151:CDS | 55.0% | |
| CAATTTGGGCAGAGACCAGG+TGG | - | chr5.3:74000097-74000116 | MS.gene017151:CDS | 55.0% | |
| CCGCCAGTATCATATCCTGG+TGG | - | chr5.3:73999956-73999975 | MS.gene017151:CDS | 55.0% | |
| CCGGTTATTCAAGCTCAGCC+TGG | - | chr5.3:73999866-73999885 | MS.gene017151:CDS | 55.0% | |
| CCTCCTGGTCAGATGGTTAG+AGG | - | chr5.3:74000181-74000200 | MS.gene017151:CDS | 55.0% | |
| CCTCTAACCATCTGACCAGG+AGG | + | chr5.3:74000184-74000203 | None:intergenic | 55.0% | |
| CGAAAACTTCCACCGGCGAA+GGG | - | chr5.3:73999650-73999669 | MS.gene017151:CDS | 55.0% | |
| CGTCCGCCAGTATCATATCC+TGG | - | chr5.3:73999953-73999972 | MS.gene017151:CDS | 55.0% | |
| CTAACCATCTGACCAGGAGG+AGG | + | chr5.3:74000181-74000200 | None:intergenic | 55.0% | |
| GGCATACCAAATTGCGGAGG+AGG | + | chr5.3:74000124-74000143 | None:intergenic | 55.0% | |
| GGTATGCCACCTCCTCAGTA+TGG | - | chr5.3:74000136-74000155 | MS.gene017151:CDS | 55.0% | |
| GGTCCTCTAACCATCTGACC+AGG | + | chr5.3:74000187-74000206 | None:intergenic | 55.0% | |
| GGTGGCATACCAAATTGCGG+AGG | + | chr5.3:74000127-74000146 | None:intergenic | 55.0% | |
| TCCTCCTGGAAGTGGTGTTC+CGG | - | chr5.3:74000261-74000280 | MS.gene017151:CDS | 55.0% | |
| TCGAAAACTTCCACCGGCGA+AGG | - | chr5.3:73999649-73999668 | MS.gene017151:CDS | 55.0% | |
| TGAGCTTGAATAACCGGCGC+CGG | + | chr5.3:73999863-73999882 | None:intergenic | 55.0% | |
| TTGGAACGAGATTCCTCCGG+TGG | + | chr5.3:73999776-73999795 | None:intergenic | 55.0% | |
| ! | CGACAAGTTGACGACCGTCT+TGG | + | chr5.3:73999571-73999590 | None:intergenic | 55.0% |
| ! | GCAATGGCTGGTCCTGGAAT+TGG | - | chr5.3:73999812-73999831 | MS.gene017151:CDS | 55.0% |
| ! | GTAAGTGCTGCTGCAATGGC+TGG | - | chr5.3:73999800-73999819 | MS.gene017151:CDS | 55.0% |
| ! | GTTTTCTTACCCTTCGCCGG+TGG | + | chr5.3:73999662-73999681 | None:intergenic | 55.0% |
| AAGGTCCACCGCAGATGGTG+AGG | - | chr5.3:74000047-74000066 | MS.gene017151:CDS | 60.0% | |
| AATTGCGGAGGAGGACCACC+TGG | + | chr5.3:74000115-74000134 | None:intergenic | 60.0% | |
| ACACCACTTCCAGGAGGAGG+AGG | + | chr5.3:74000259-74000278 | None:intergenic | 60.0% | |
| ACCATCTGACCAGGAGGAGG+TGG | + | chr5.3:74000178-74000197 | None:intergenic | 60.0% | |
| ACCGGAACACCACTTCCAGG+AGG | + | chr5.3:74000265-74000284 | None:intergenic | 60.0% | |
| AGGTCCACCGCAGATGGTGA+GGG | - | chr5.3:74000048-74000067 | MS.gene017151:CDS | 60.0% | |
| ATCTGCGGTGGACCTTGTCC+AGG | + | chr5.3:74000043-74000062 | None:intergenic | 60.0% | |
| ATGCCTCCTCCTCCTGGAAG+TGG | - | chr5.3:74000253-74000272 | MS.gene017151:CDS | 60.0% | |
| ATTCCAGGACGAGGAGGAGC+AGG | + | chr5.3:74000211-74000230 | None:intergenic | 60.0% | |
| CCATCTGACCAGGAGGAGGT+GGG | + | chr5.3:74000177-74000196 | None:intergenic | 60.0% | |
| CCTGCAGCACGACCAATTCC+AGG | + | chr5.3:73999827-73999846 | None:intergenic | 60.0% | |
| CCTGGAATTGGTCGTGCTGC+AGG | - | chr5.3:73999824-73999843 | MS.gene017151:CDS | 60.0% | |
| CGAACAGGACCAGCAAGACC+AGG | + | chr5.3:73999887-73999906 | None:intergenic | 60.0% | |
| CTATGCCGCCGGGGCAATTT+GGG | - | chr5.3:74000083-74000102 | MS.gene017151:CDS | 60.0% | |
| CTCTGCCCATACTGAGGAGG+TGG | + | chr5.3:74000145-74000164 | None:intergenic | 60.0% | |
| GAACCAAACCGAGTGTGCGG+CGG | + | chr5.3:73999706-73999725 | None:intergenic | 60.0% | |
| GAACGAGATTCCTCCGGTGG+TGG | + | chr5.3:73999773-73999792 | None:intergenic | 60.0% | |
| GCTGGTCCTGTTCGTGGTGT+AGG | - | chr5.3:73999893-73999912 | MS.gene017151:CDS | 60.0% | |
| GGAACACCACTTCCAGGAGG+AGG | + | chr5.3:74000262-74000281 | None:intergenic | 60.0% | |
| GGACCTTGTCCAGGATGTCC+AGG | + | chr5.3:74000034-74000053 | None:intergenic | 60.0% | |
| GGCCGAGGTGGACCATAAAC+CGG | + | chr5.3:74000283-74000302 | None:intergenic | 60.0% | |
| GGCTGCATCATACCAGGAGC+AGG | + | chr5.3:73999923-73999942 | None:intergenic | 60.0% | |
| GGGCAATTTGGGCAGAGACC+AGG | - | chr5.3:74000094-74000113 | MS.gene017151:CDS | 60.0% | |
| GGTCCACCTACACCACGAAC+AGG | + | chr5.3:73999902-73999921 | None:intergenic | 60.0% | |
| GGTCCTGTTCGTGGTGTAGG+TGG | - | chr5.3:73999896-73999915 | MS.gene017151:CDS | 60.0% | |
| GGTCTCTGCCCAAATTGCCC+CGG | + | chr5.3:74000094-74000113 | None:intergenic | 60.0% | |
| GGTCTCTGCCCATACTGAGG+AGG | + | chr5.3:74000148-74000167 | None:intergenic | 60.0% | |
| GGTCTTGCTGGTCCTGTTCG+TGG | - | chr5.3:73999887-73999906 | MS.gene017151:CDS | 60.0% | |
| GGTGGTCCTCCTCCGCAATT+TGG | - | chr5.3:74000115-74000134 | MS.gene017151:CDS | 60.0% | |
| GTTATGCGTCCGCCTGGTCA+AGG | - | chr5.3:73999986-74000005 | MS.gene017151:CDS | 60.0% | |
| GTTTATGGTCCACCTCGGCC+TGG | - | chr5.3:74000283-74000302 | MS.gene017151:CDS | 60.0% | |
| TGACCAGGCGGACGCATAAC+CGG | + | chr5.3:73999986-74000005 | None:intergenic | 60.0% | |
| TGACCAGGTGGACCTTGACC+AGG | + | chr5.3:74000001-74000020 | None:intergenic | 60.0% | |
| TGGACAAGGTCCACCGCAGA+TGG | - | chr5.3:74000042-74000061 | MS.gene017151:CDS | 60.0% | |
| ! | ACTGGCGGACGCGAAATCTG+CGG | + | chr5.3:73999944-73999963 | None:intergenic | 60.0% |
| ! | TTTGGTGGAGGAGGCATGCC+AGG | + | chr5.3:74000304-74000323 | None:intergenic | 60.0% |
| !! | CAAGCTCAGCCTGGTCTTGC+TGG | - | chr5.3:73999875-73999894 | MS.gene017151:CDS | 60.0% |
| !! | TAGAGGTATTCCTCCGGCGC+CGG | - | chr5.3:73999847-73999866 | MS.gene017151:CDS | 60.0% |
| AATTGCCCCGGCGGCATAGG+AGG | + | chr5.3:74000082-74000101 | None:intergenic | 65.0% | |
| AGACCGCCGCACACTCGGTT+TGG | - | chr5.3:73999700-73999719 | MS.gene017151:CDS | 65.0% | |
| CCAAATTGCCCCGGCGGCAT+AGG | + | chr5.3:74000085-74000104 | None:intergenic | 65.0% | |
| CCAGGTGGACCTTGACCAGG+CGG | + | chr5.3:73999998-74000017 | None:intergenic | 65.0% | |
| CCCACCTCCTCCTGGTCAGA+TGG | - | chr5.3:74000174-74000193 | MS.gene017151:CDS | 65.0% | |
| CCTATGCCGCCGGGGCAATT+TGG | - | chr5.3:74000082-74000101 | MS.gene017151:CDS | 65.0% | |
| CCTGGAATGCCTCCTCCTCC+TGG | - | chr5.3:74000247-74000266 | MS.gene017151:CDS | 65.0% | |
| CGAGTGTGCGGCGGTCTTCA+CGG | + | chr5.3:73999697-73999716 | None:intergenic | 65.0% | |
| CGTGAAGACCGCCGCACACT+CGG | - | chr5.3:73999695-73999714 | MS.gene017151:CDS | 65.0% | |
| CTCTGCCCAAATTGCCCCGG+CGG | + | chr5.3:74000091-74000110 | None:intergenic | 65.0% | |
| GGCTGCATTCCAGGACGAGG+AGG | + | chr5.3:74000217-74000236 | None:intergenic | 65.0% | |
| GGTCCACCGCAGATGGTGAG+GGG | - | chr5.3:74000049-74000068 | MS.gene017151:CDS | 65.0% | |
| GGTGGACCCCTCACCATCTG+CGG | + | chr5.3:74000058-74000077 | None:intergenic | 65.0% | |
| GGTGGCTGCATTCCAGGACG+AGG | + | chr5.3:74000220-74000239 | None:intergenic | 65.0% | |
| GGTGTAGGTGGACCTGCTCC+TGG | - | chr5.3:73999908-73999927 | MS.gene017151:CDS | 65.0% | |
| TGAAGGTCCTCCACCACCGG+AGG | - | chr5.3:73999760-73999779 | MS.gene017151:CDS | 65.0% | |
| ! | CGAGATTCCTCCGGTGGTGG+AGG | + | chr5.3:73999770-73999789 | None:intergenic | 65.0% |
| ! | CGCATAACCGGAGCACCACC+AGG | + | chr5.3:73999974-73999993 | None:intergenic | 65.0% |
| ! | GCTGCTGCAATGGCTGGTCC+TGG | - | chr5.3:73999806-73999825 | MS.gene017151:CDS | 65.0% |
| ! | GCTTGAATAACCGGCGCCGG+AGG | + | chr5.3:73999860-73999879 | None:intergenic | 65.0% |
| !! | CCAGGAGGAGGAGGCATTCC+AGG | + | chr5.3:74000250-74000269 | None:intergenic | 65.0% |
| !! | GGAGGAGGCATTCCAGGACG+AGG | + | chr5.3:74000244-74000263 | None:intergenic | 65.0% |
| !! | GGAGGCATTCCAGGACGAGG+CGG | + | chr5.3:74000241-74000260 | None:intergenic | 65.0% |
| ATGCAGCCACCGCCTCGTCC+TGG | - | chr5.3:74000229-74000248 | MS.gene017151:CDS | 70.0% | |
| CCAGGACGAGGAGGAGCAGG+AGG | + | chr5.3:74000208-74000227 | None:intergenic | 70.0% | |
| CCAGGAGGAGGTGGGCCCAT+AGG | + | chr5.3:74000169-74000188 | None:intergenic | 70.0% | |
| CCGCCTGGTCAAGGTCCACC+TGG | - | chr5.3:73999995-74000014 | MS.gene017151:CDS | 70.0% | |
| CCTATGGGCCCACCTCCTCC+TGG | - | chr5.3:74000166-74000185 | MS.gene017151:CDS | 70.0% | |
| CCTCCTGCTCCTCCTCGTCC+TGG | - | chr5.3:74000205-74000224 | MS.gene017151:CDS | 70.0% | |
| CGAGGCGGTGGCTGCATTCC+AGG | + | chr5.3:74000226-74000245 | None:intergenic | 70.0% | |
| GCGGTCTTCACGGTCGCCGT+CGG | + | chr5.3:73999687-73999706 | None:intergenic | 70.0% | |
| GCTCCGGTTATGCGTCCGCC+TGG | - | chr5.3:73999980-73999999 | MS.gene017151:CDS | 70.0% | |
| GGACCCCTCACCATCTGCGG+TGG | + | chr5.3:74000055-74000074 | None:intergenic | 70.0% | |
| GGCATTCCAGGACGAGGCGG+TGG | + | chr5.3:74000238-74000257 | None:intergenic | 70.0% | |
| GTCTTCACGGTCGCCGTCGG+TGG | + | chr5.3:73999684-73999703 | None:intergenic | 70.0% | |
| TCCACCGCCTCCTATGCCGC+CGG | - | chr5.3:74000072-74000091 | MS.gene017151:CDS | 70.0% | |
| CACCGCCTCCTATGCCGCCG+GGG | - | chr5.3:74000074-74000093 | MS.gene017151:CDS | 75.0% | |
| CCACCGCCTCCTATGCCGCC+GGG | - | chr5.3:74000073-74000092 | MS.gene017151:CDS | 75.0% | |
| TGCCCCGGCGGCATAGGAGG+CGG | + | chr5.3:74000079-74000098 | None:intergenic | 75.0% | |
| ! | GGAGGAGGCATGCCAGGCCG+AGG | + | chr5.3:74000298-74000317 | None:intergenic | 75.0% |
| ! | GGAGGCATGCCAGGCCGAGG+TGG | + | chr5.3:74000295-74000314 | None:intergenic | 75.0% |
| ! | CCCGGCGGCATAGGAGGCGG+TGG | + | chr5.3:74000076-74000095 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 73999506 | 74000351 | 73999506 | ID=MS.gene017151 |
| chr5.3 | mRNA | 73999506 | 74000351 | 73999506 | ID=MS.gene017151.t1;Parent=MS.gene017151 |
| chr5.3 | exon | 73999506 | 74000351 | 73999506 | ID=MS.gene017151.t1.exon1;Parent=MS.gene017151.t1 |
| chr5.3 | CDS | 73999506 | 74000351 | 73999506 | ID=cds.MS.gene017151.t1;Parent=MS.gene017151.t1 |
| Gene Sequence |
| Protein sequence |
