Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017969.t1 | XP_003625236.2 | 94.1 | 340 | 16 | 2 | 1 | 339 | 75 | 411 | 2.70E-147 | 531.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017969.t1 | S4WUL1 | 37.4 | 374 | 167 | 11 | 2 | 339 | 13 | 355 | 6.2e-39 | 162.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017969.t1 | G7KVB2 | 94.1 | 340 | 16 | 2 | 1 | 339 | 1 | 337 | 2.0e-147 | 531.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene017969.t1 | TF | SBP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene018772 | MS.gene017969 | PPI |
| MS.gene04607 | MS.gene017969 | PPI |
| MS.gene04608 | MS.gene017969 | PPI |
| MS.gene017969 | MS.gene97631 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017969.t1 | MTR_7g092930 | 89.706 | 340 | 31 | 2 | 1 | 339 | 1 | 337 | 0.0 | 561 |
| MS.gene017969.t1 | MTR_1g053715 | 55.394 | 343 | 105 | 12 | 14 | 323 | 20 | 347 | 2.94e-103 | 307 |
| MS.gene017969.t1 | MTR_3g085180 | 36.981 | 265 | 119 | 7 | 17 | 256 | 120 | 361 | 3.55e-41 | 149 |
| MS.gene017969.t1 | MTR_7g444860 | 50.376 | 133 | 61 | 1 | 14 | 146 | 101 | 228 | 8.38e-38 | 137 |
| MS.gene017969.t1 | MTR_8g463140 | 70.732 | 82 | 24 | 0 | 64 | 145 | 62 | 143 | 5.06e-37 | 131 |
| MS.gene017969.t1 | MTR_4g109770 | 52.713 | 129 | 57 | 1 | 13 | 141 | 73 | 197 | 1.93e-36 | 137 |
| MS.gene017969.t1 | MTR_4g088555 | 72.727 | 77 | 21 | 0 | 64 | 140 | 60 | 136 | 6.14e-36 | 127 |
| MS.gene017969.t1 | MTR_2g461920 | 57.252 | 131 | 53 | 3 | 39 | 169 | 144 | 271 | 1.01e-35 | 136 |
| MS.gene017969.t1 | MTR_8g080690 | 36.803 | 269 | 139 | 8 | 4 | 251 | 86 | 344 | 1.86e-35 | 132 |
| MS.gene017969.t1 | MTR_3g099080 | 52.679 | 112 | 53 | 0 | 35 | 146 | 66 | 177 | 6.73e-35 | 131 |
| MS.gene017969.t1 | MTR_5g046670 | 71.429 | 77 | 22 | 0 | 65 | 141 | 242 | 318 | 5.13e-34 | 130 |
| MS.gene017969.t1 | MTR_8g005960 | 67.857 | 84 | 27 | 0 | 57 | 140 | 177 | 260 | 1.10e-33 | 127 |
| MS.gene017969.t1 | MTR_8g080680 | 35.200 | 250 | 139 | 7 | 18 | 251 | 84 | 326 | 2.58e-33 | 127 |
| MS.gene017969.t1 | MTR_2g014200 | 65.517 | 87 | 26 | 1 | 56 | 142 | 57 | 139 | 2.78e-33 | 120 |
| MS.gene017969.t1 | MTR_2g078770 | 71.053 | 76 | 22 | 0 | 65 | 140 | 56 | 131 | 3.33e-33 | 121 |
| MS.gene017969.t1 | MTR_7g028740 | 63.636 | 88 | 32 | 0 | 62 | 149 | 72 | 159 | 5.24e-33 | 125 |
| MS.gene017969.t1 | MTR_8g096780 | 59.091 | 88 | 36 | 0 | 62 | 149 | 94 | 181 | 1.71e-31 | 122 |
| MS.gene017969.t1 | MTR_2g046550 | 51.261 | 119 | 51 | 1 | 52 | 170 | 124 | 235 | 2.48e-31 | 125 |
| MS.gene017969.t1 | MTR_8g080670 | 48.413 | 126 | 48 | 1 | 14 | 139 | 126 | 234 | 2.84e-31 | 122 |
| MS.gene017969.t1 | MTR_1g086250 | 51.111 | 135 | 59 | 3 | 10 | 140 | 89 | 220 | 2.89e-31 | 125 |
| MS.gene017969.t1 | MTR_1g035010 | 58.333 | 96 | 40 | 0 | 51 | 146 | 88 | 183 | 1.40e-30 | 122 |
| MS.gene017969.t1 | MTR_7g110320 | 68.919 | 74 | 23 | 0 | 67 | 140 | 145 | 218 | 2.80e-29 | 119 |
| MS.gene017969.t1 | MTR_7g110320 | 68.919 | 74 | 23 | 0 | 67 | 140 | 145 | 218 | 4.58e-29 | 118 |
| MS.gene017969.t1 | MTR_2g020620 | 48.529 | 68 | 35 | 0 | 73 | 140 | 96 | 163 | 1.15e-16 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017969.t1 | AT2G42200 | 42.448 | 384 | 120 | 17 | 17 | 339 | 32 | 375 | 4.02e-66 | 213 |
| MS.gene017969.t1 | AT3G57920 | 39.516 | 372 | 132 | 17 | 17 | 339 | 27 | 354 | 4.72e-62 | 202 |
| MS.gene017969.t1 | AT1G27370 | 47.887 | 142 | 56 | 3 | 8 | 141 | 119 | 250 | 5.01e-37 | 136 |
| MS.gene017969.t1 | AT5G43270 | 55.469 | 128 | 56 | 1 | 16 | 143 | 119 | 245 | 9.19e-37 | 137 |
| MS.gene017969.t1 | AT5G43270 | 55.469 | 128 | 56 | 1 | 16 | 143 | 119 | 245 | 9.19e-37 | 137 |
| MS.gene017969.t1 | AT5G43270 | 55.469 | 128 | 56 | 1 | 16 | 143 | 119 | 245 | 9.19e-37 | 137 |
| MS.gene017969.t1 | AT1G27370 | 47.887 | 142 | 56 | 3 | 8 | 141 | 119 | 250 | 1.65e-36 | 136 |
| MS.gene017969.t1 | AT1G27370 | 47.887 | 142 | 56 | 3 | 8 | 141 | 119 | 250 | 1.65e-36 | 136 |
| MS.gene017969.t1 | AT1G27370 | 47.887 | 142 | 56 | 3 | 8 | 141 | 119 | 250 | 1.65e-36 | 136 |
| MS.gene017969.t1 | AT1G27370 | 47.887 | 142 | 56 | 3 | 8 | 141 | 119 | 250 | 1.65e-36 | 136 |
| MS.gene017969.t1 | AT1G27370 | 47.887 | 142 | 56 | 3 | 8 | 141 | 119 | 250 | 1.65e-36 | 136 |
| MS.gene017969.t1 | AT1G27370 | 47.887 | 142 | 56 | 3 | 8 | 141 | 119 | 250 | 1.65e-36 | 136 |
| MS.gene017969.t1 | AT1G69170 | 54.015 | 137 | 51 | 3 | 51 | 185 | 109 | 235 | 2.85e-36 | 135 |
| MS.gene017969.t1 | AT1G27360 | 50.000 | 134 | 64 | 2 | 8 | 141 | 119 | 249 | 4.81e-36 | 134 |
| MS.gene017969.t1 | AT1G27360 | 50.000 | 134 | 64 | 2 | 8 | 141 | 119 | 249 | 4.81e-36 | 134 |
| MS.gene017969.t1 | AT1G27360 | 50.000 | 134 | 64 | 2 | 8 | 141 | 119 | 249 | 4.81e-36 | 134 |
| MS.gene017969.t1 | AT1G27360 | 50.000 | 134 | 64 | 2 | 8 | 141 | 119 | 249 | 4.81e-36 | 134 |
| MS.gene017969.t1 | AT2G33810 | 71.622 | 74 | 21 | 0 | 67 | 140 | 54 | 127 | 9.10e-35 | 124 |
| MS.gene017969.t1 | AT5G50670 | 48.000 | 150 | 71 | 2 | 4 | 146 | 31 | 180 | 2.77e-34 | 129 |
| MS.gene017969.t1 | AT5G50670 | 48.000 | 150 | 71 | 2 | 4 | 146 | 31 | 180 | 2.77e-34 | 129 |
| MS.gene017969.t1 | AT5G50570 | 48.000 | 150 | 71 | 2 | 4 | 146 | 31 | 180 | 2.77e-34 | 129 |
| MS.gene017969.t1 | AT5G50570 | 48.000 | 150 | 71 | 2 | 4 | 146 | 31 | 180 | 2.77e-34 | 129 |
| MS.gene017969.t1 | AT1G02065 | 52.800 | 125 | 48 | 2 | 16 | 140 | 148 | 261 | 8.97e-34 | 127 |
| MS.gene017969.t1 | AT3G15270 | 68.919 | 74 | 23 | 0 | 67 | 140 | 63 | 136 | 1.75e-33 | 122 |
| MS.gene017969.t1 | AT1G53160 | 46.667 | 135 | 55 | 3 | 55 | 187 | 47 | 166 | 9.61e-33 | 120 |
| MS.gene017969.t1 | AT1G53160 | 61.538 | 91 | 30 | 1 | 55 | 145 | 47 | 132 | 2.87e-32 | 119 |
| MS.gene017969.t1 | AT1G53160 | 61.538 | 91 | 30 | 1 | 55 | 145 | 47 | 132 | 2.87e-32 | 119 |
| MS.gene017969.t1 | AT2G47070 | 62.366 | 93 | 28 | 1 | 51 | 143 | 97 | 182 | 4.19e-32 | 127 |
| MS.gene017969.t1 | AT3G60030 | 49.587 | 121 | 61 | 0 | 26 | 146 | 86 | 206 | 6.19e-32 | 127 |
| MS.gene017969.t1 | AT1G76580 | 60.227 | 88 | 35 | 0 | 65 | 152 | 112 | 199 | 2.47e-30 | 122 |
| MS.gene017969.t1 | AT1G76580 | 60.227 | 88 | 35 | 0 | 65 | 152 | 112 | 199 | 3.02e-30 | 121 |
| MS.gene017969.t1 | AT1G76580 | 60.227 | 88 | 35 | 0 | 65 | 152 | 112 | 199 | 3.90e-30 | 121 |
| MS.gene017969.t1 | AT1G20980 | 62.222 | 90 | 33 | 1 | 51 | 140 | 105 | 193 | 6.94e-29 | 118 |
| MS.gene017969.t1 | AT5G18830 | 46.154 | 91 | 45 | 1 | 52 | 142 | 127 | 213 | 8.14e-21 | 94.0 |
| MS.gene017969.t1 | AT5G18830 | 46.154 | 91 | 45 | 1 | 52 | 142 | 127 | 213 | 8.65e-21 | 94.0 |
| MS.gene017969.t1 | AT5G18830 | 46.154 | 91 | 45 | 1 | 52 | 142 | 127 | 213 | 9.95e-21 | 94.0 |
| MS.gene017969.t1 | AT2G47070 | 75.472 | 53 | 13 | 0 | 91 | 143 | 1 | 53 | 3.89e-20 | 92.0 |
| MS.gene017969.t1 | AT1G02065 | 45.370 | 108 | 46 | 3 | 16 | 121 | 148 | 244 | 3.19e-19 | 85.9 |
Find 96 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCCTACTGTTACTGTTTC+TGG | 0.047497 | 7.1:+14588648 | MS.gene017969:CDS |
| TCTCTTAATGGCTTAAAATT+TGG | 0.163500 | 7.1:+14588402 | MS.gene017969:CDS |
| GATTGTTGTGGTCTGATTTC+CGG | 0.239907 | 7.1:-14591261 | None:intergenic |
| TCGGAAGAGTCCTCTCTTAA+TGG | 0.276595 | 7.1:+14588390 | MS.gene017969:CDS |
| GAATTTCTCAGACTAAGTTT+TGG | 0.340913 | 7.1:-14591227 | None:intergenic |
| ATTGTTGTGGTCTGATTTCC+GGG | 0.344809 | 7.1:-14591260 | None:intergenic |
| AACCTCACACCAATGGATTC+AGG | 0.357567 | 7.1:+14588354 | None:intergenic |
| AATAACATGCTGAATTTCAA+TGG | 0.376067 | 7.1:+14591482 | MS.gene017969:CDS |
| GCAGGGAAGGAGGCATTATA+TGG | 0.380825 | 7.1:+14591652 | MS.gene017969:CDS |
| TCTTCTTCTGGTTCAAAGAA+AGG | 0.384894 | 7.1:+14588504 | MS.gene017969:CDS |
| ATGTGACCCCGGCCAAGATC+GGG | 0.400840 | 7.1:-14591581 | None:intergenic |
| CGAGCTTGATCTGTCGCAGC+AGG | 0.402927 | 7.1:+14591634 | MS.gene017969:CDS |
| AACAATCGGTTGGCCTTGGC+CGG | 0.403146 | 7.1:+14591277 | MS.gene017969:CDS |
| CAGAGGTGGCAGCTTCTTGA+TGG | 0.405708 | 7.1:+14591190 | MS.gene017969:CDS |
| TTCAGGAGGCAACTCTTCTT+CGG | 0.406824 | 7.1:+14588371 | MS.gene017969:CDS |
| AGTTTCCTCGGGAGGATGTC+TGG | 0.417156 | 7.1:-14591369 | None:intergenic |
| GACTCCAGTGTAAGTTTCCT+CGG | 0.430936 | 7.1:-14591381 | None:intergenic |
| ATATGGATGTAGAACATTCC+AGG | 0.443177 | 7.1:+14591669 | MS.gene017969:CDS |
| TCTTGCAAGGTTTGGTAGGT+GGG | 0.445397 | 7.1:+14591330 | MS.gene017969:CDS |
| CTCTTCTGTCAAATCAAACA+TGG | 0.449340 | 7.1:+14591426 | MS.gene017969:CDS |
| TTCTTGCAAGGTTTGGTAGG+TGG | 0.461450 | 7.1:+14591329 | MS.gene017969:CDS |
| ATGTTATTCAATCCAGGACT+TGG | 0.463473 | 7.1:-14591467 | None:intergenic |
| CAGCTTGCTGAGTTTGATCA+AGG | 0.464199 | 7.1:+14590915 | MS.gene017969:CDS |
| AATGTGACCCCGGCCAAGAT+CGG | 0.466474 | 7.1:-14591582 | None:intergenic |
| GTAGGTGGGACAAGCTTCCC+TGG | 0.467152 | 7.1:+14591344 | MS.gene017969:CDS |
| AGGTTAAGAGAGAGCTGGGT+GGG | 0.469309 | 7.1:-14590992 | None:intergenic |
| CAATCGGTTGGCCTTGGCCG+GGG | 0.476765 | 7.1:+14591279 | MS.gene017969:CDS |
| TTGGCCTTGGCCGGGGAACA+CGG | 0.477293 | 7.1:+14591286 | MS.gene017969:CDS |
| ACAATCGGTTGGCCTTGGCC+GGG | 0.480117 | 7.1:+14591278 | MS.gene017969:CDS |
| TGACCATTGAGAAGATTCAT+AGG | 0.480203 | 7.1:-14591693 | None:intergenic |
| TTCAGCATGTTATTCAATCC+AGG | 0.487732 | 7.1:-14591473 | None:intergenic |
| TATCTTCAAAATAGATTCGT+TGG | 0.488281 | 7.1:-14588425 | None:intergenic |
| TATGACCAGCTAGTCGTCTC+CGG | 0.489324 | 7.1:-14590950 | None:intergenic |
| CTACCAAACCTTGCAAGAAA+AGG | 0.489810 | 7.1:-14591325 | None:intergenic |
| CCACAACAATCGGTTGGCCT+TGG | 0.489925 | 7.1:+14591273 | MS.gene017969:CDS |
| TTGAGAAGATTCATAGGCCC+TGG | 0.491228 | 7.1:-14591687 | None:intergenic |
| GTGGTCTGATTTCCGGGTGG+TGG | 0.494603 | 7.1:-14591254 | None:intergenic |
| GACTCCGTGTTCCCCGGCCA+AGG | 0.497185 | 7.1:-14591290 | None:intergenic |
| CCACCTCGGTGTCAAGTTGA+AGG | 0.497533 | 7.1:+14588555 | MS.gene017969:CDS |
| ATAACATGCTGAATTTCAAT+GGG | 0.498202 | 7.1:+14591483 | MS.gene017969:CDS |
| CTGTTTCTGGTCTACAACAA+AGG | 0.499773 | 7.1:+14588661 | MS.gene017969:CDS |
| CGAAACGCAGAACCAAGTCC+TGG | 0.499881 | 7.1:+14591455 | MS.gene017969:CDS |
| GGAAATCAGACCACAACAAT+CGG | 0.506712 | 7.1:+14591263 | MS.gene017969:CDS |
| TCGGGAGGATGTCTGGCACC+AGG | 0.517700 | 7.1:-14591362 | None:intergenic |
| AGAAGAAGAACTAGCAGCAA+TGG | 0.529953 | 7.1:-14588484 | None:intergenic |
| GGTTAAGAGAGAGCTGGGTG+GGG | 0.530104 | 7.1:-14590991 | None:intergenic |
| CCTCTCGGTAGCCAACTCTC+TGG | 0.530975 | 7.1:+14591611 | MS.gene017969:CDS |
| GTTAAGAGAGAGCTGGGTGG+GGG | 0.532570 | 7.1:-14590990 | None:intergenic |
| TCTGGTTCAAAGAAAGGAAG+AGG | 0.539167 | 7.1:+14588510 | MS.gene017969:CDS |
| ACGTGAGGTTAAGAGAGAGC+TGG | 0.539304 | 7.1:-14590997 | None:intergenic |
| CGTGAGGTTAAGAGAGAGCT+GGG | 0.546066 | 7.1:-14590996 | None:intergenic |
| CGGGAGGATGTCTGGCACCA+GGG | 0.551042 | 7.1:-14591361 | None:intergenic |
| CAACTTCCTACATCTTCTCA+TGG | 0.554762 | 7.1:+14591518 | MS.gene017969:CDS |
| GATCAAGCTCGCCAGAGAGT+TGG | 0.556325 | 7.1:-14591622 | None:intergenic |
| ACTCCAGTGTAAGTTTCCTC+GGG | 0.556391 | 7.1:-14591380 | None:intergenic |
| GATGGCGACTCCGTGTTCCC+CGG | 0.557604 | 7.1:-14591296 | None:intergenic |
| TCTTCTGTCAAATCAAACAT+GGG | 0.559601 | 7.1:+14591427 | MS.gene017969:CDS |
| AGTTGCCGGAGACGACTAGC+TGG | 0.563944 | 7.1:+14590945 | MS.gene017969:CDS |
| AGAAGAACTAGCAGCAATGG+TGG | 0.566347 | 7.1:-14588481 | None:intergenic |
| GGGCCTATGAATCTTCTCAA+TGG | 0.567201 | 7.1:+14591690 | MS.gene017969:CDS |
| TCCTACATCTTCTCATGGTG+TGG | 0.568881 | 7.1:+14591523 | MS.gene017969:CDS |
| GACCAGAAACAGTAACAGTA+GGG | 0.576648 | 7.1:-14588650 | None:intergenic |
| TATGGATGTAGAACATTCCA+GGG | 0.576787 | 7.1:+14591670 | MS.gene017969:CDS |
| AGATGTAGGAAGTTGTGTCA+TGG | 0.581014 | 7.1:-14591510 | None:intergenic |
| TTGATCTGTCGCAGCAGGGA+AGG | 0.589630 | 7.1:+14591639 | MS.gene017969:CDS |
| ATCTGTCGCAGCAGGGAAGG+AGG | 0.591353 | 7.1:+14591642 | MS.gene017969:CDS |
| ATCAGACCACAACAATCGGT+TGG | 0.596554 | 7.1:+14591267 | MS.gene017969:CDS |
| AGAAATTCACTTCCACCACC+CGG | 0.604886 | 7.1:+14591242 | MS.gene017969:CDS |
| GGTCACATTTCACAGCCTCT+CGG | 0.605085 | 7.1:+14591596 | MS.gene017969:CDS |
| AGACCAGAAACAGTAACAGT+AGG | 0.606139 | 7.1:-14588651 | None:intergenic |
| TGTGACCCCGGCCAAGATCG+GGG | 0.609613 | 7.1:-14591580 | None:intergenic |
| ATTGTTTGAAACTTGATGCA+TGG | 0.609636 | 7.1:-14591546 | None:intergenic |
| GGTTCAAAGAAAGGAAGAGG+TGG | 0.614988 | 7.1:+14588513 | MS.gene017969:CDS |
| TGCAAGAAAAGGTTGTCAGA+TGG | 0.616796 | 7.1:-14591314 | None:intergenic |
| GTGACCCCGGCCAAGATCGG+GGG | 0.625314 | 7.1:-14591579 | None:intergenic |
| CCTCCCGAGGAAACTTACAC+TGG | 0.634056 | 7.1:+14591377 | MS.gene017969:CDS |
| CCAGTGTAAGTTTCCTCGGG+AGG | 0.637090 | 7.1:-14591377 | None:intergenic |
| GAGGCTGTGAAATGTGACCC+CGG | 0.637432 | 7.1:-14591592 | None:intergenic |
| GAGCTTGATCTGTCGCAGCA+GGG | 0.644837 | 7.1:+14591635 | MS.gene017969:CDS |
| AGAAAGCCTGGCAAAACGTG+AGG | 0.647012 | 7.1:-14591012 | None:intergenic |
| CCAAGGCCAACCGATTGTTG+TGG | 0.647809 | 7.1:-14591273 | None:intergenic |
| CTTCTGTCAAATCAAACATG+GGG | 0.651750 | 7.1:+14591428 | MS.gene017969:CDS |
| GCCACACCATGAGAAGATGT+AGG | 0.656605 | 7.1:-14591524 | None:intergenic |
| GTTCAAAGAAAGGAAGAGGT+GGG | 0.656815 | 7.1:+14588514 | MS.gene017969:CDS |
| GAGTTGCCTCCTGAATCCAT+TGG | 0.670435 | 7.1:-14588363 | None:intergenic |
| TTCAACATTCTCAACCACCT+CGG | 0.675950 | 7.1:+14588541 | MS.gene017969:CDS |
| TGGTGCCAGACATCCTCCCG+AGG | 0.679309 | 7.1:+14591364 | MS.gene017969:CDS |
| CCTTCAACTTGACACCGAGG+TGG | 0.683119 | 7.1:-14588555 | None:intergenic |
| GAGGTTAAGAGAGAGCTGGG+TGG | 0.689151 | 7.1:-14590993 | None:intergenic |
| TCAAGTTTCAAACAATTACG+AGG | 0.690642 | 7.1:+14591553 | MS.gene017969:CDS |
| CCAGAGAGTTGGCTACCGAG+AGG | 0.703528 | 7.1:-14591611 | None:intergenic |
| ACAGGTAACAGTGACAGAGG+TGG | 0.704297 | 7.1:+14591176 | MS.gene017969:intron |
| TCGACAGGTAACAGTGACAG+AGG | 0.705027 | 7.1:+14591173 | MS.gene017969:intron |
| CTCACACCAATGGATTCAGG+AGG | 0.709638 | 7.1:+14588357 | None:intergenic |
| CATCCTTCAACTTGACACCG+AGG | 0.727400 | 7.1:-14588558 | None:intergenic |
| GTTGTGGTCTGATTTCCGGG+TGG | 0.754915 | 7.1:-14591257 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTGATTCTTTTTTTTATT+TGG | + | chr7.1:14589168-14589187 | MS.gene017969:intron | 10.0% |
| !!! | TATATATAATTTGATTTATC+TGG | + | chr7.1:14589361-14589380 | MS.gene017969:intron | 10.0% |
| !! | AATGAAATTGAATTAAAGTA+TGG | + | chr7.1:14589563-14589582 | MS.gene017969:intron | 15.0% |
| !! | ATTAAACAATTTCAAATACT+TGG | + | chr7.1:14591142-14591161 | MS.gene017969:intron | 15.0% |
| !! | CTAATTAATAAGATAACTAA+TGG | + | chr7.1:14589811-14589830 | MS.gene017969:intron | 15.0% |
| !! | TAATGTGAATAATTTGAAAA+TGG | + | chr7.1:14590367-14590386 | MS.gene017969:intron | 15.0% |
| !! | TGAATAAATAAGAAAACTAA+AGG | + | chr7.1:14590634-14590653 | MS.gene017969:intron | 15.0% |
| !!! | TTTTCAAATTATTCACATTA+TGG | - | chr7.1:14590367-14590386 | None:intergenic | 15.0% |
| !! | ATAAAACTAAACCAAATACT+TGG | - | chr7.1:14589644-14589663 | None:intergenic | 20.0% |
| !! | ATATAATCTTAACTAAGAGT+TGG | - | chr7.1:14590793-14590812 | None:intergenic | 20.0% |
| !! | TGTCTATCTTAATTTATCAT+GGG | + | chr7.1:14590764-14590783 | MS.gene017969:intron | 20.0% |
| !! | TTAGATTCTTAAAACATCTT+CGG | - | chr7.1:14590458-14590477 | None:intergenic | 20.0% |
| !! | TTGCTCTCAAAAAAAAAAAA+AGG | - | chr7.1:14588845-14588864 | None:intergenic | 20.0% |
| !!! | AACTTTTTTTTATAACTCCA+TGG | - | chr7.1:14589391-14589410 | None:intergenic | 20.0% |
| !!! | ACACATATCATTTTCATAAA+GGG | - | chr7.1:14589443-14589462 | None:intergenic | 20.0% |
| !!! | ATAAAAAAAAGTTCTGGTTT+AGG | + | chr7.1:14589398-14589417 | MS.gene017969:intron | 20.0% |
| !!! | TATTTCTGATAAAATGTGTA+TGG | + | chr7.1:14588752-14588771 | MS.gene017969:intron | 20.0% |
| !!! | TATTTTATTCTGTTATTCTC+CGG | + | chr7.1:14588868-14588887 | MS.gene017969:intron | 20.0% |
| !!! | TTCATTTTGTGATTATTCAA+TGG | + | chr7.1:14589985-14590004 | MS.gene017969:intron | 20.0% |
| ! | AAAAGTTGAAGAAGAAAAAG+AGG | - | chr7.1:14588732-14588751 | None:intergenic | 25.0% |
| ! | AAAGTATGGACTTAGAAATT+AGG | + | chr7.1:14589577-14589596 | MS.gene017969:intron | 25.0% |
| ! | AAGAAGAAAAAGAGGAAATA+GGG | - | chr7.1:14588724-14588743 | None:intergenic | 25.0% |
| ! | AATAACATGCTGAATTTCAA+TGG | + | chr7.1:14591482-14591501 | MS.gene017969:CDS | 25.0% |
| ! | AATAGTACTAATTCTCACTA+AGG | - | chr7.1:14589925-14589944 | None:intergenic | 25.0% |
| ! | ACCTATAATACAATAAAACC+CGG | - | chr7.1:14588890-14588909 | None:intergenic | 25.0% |
| ! | AGGTTCATTTAGATCAATAA+AGG | - | chr7.1:14589677-14589696 | None:intergenic | 25.0% |
| ! | ATAACATGCTGAATTTCAAT+GGG | + | chr7.1:14591483-14591502 | MS.gene017969:CDS | 25.0% |
| ! | CTGCCTAAAAAATAACATAA+GGG | - | chr7.1:14590590-14590609 | None:intergenic | 25.0% |
| ! | GGAGTTATAAAAAAAAGTTC+TGG | + | chr7.1:14589392-14589411 | MS.gene017969:intron | 25.0% |
| ! | GTATGATAAAACCAAGTATT+TGG | + | chr7.1:14589630-14589649 | MS.gene017969:intron | 25.0% |
| ! | GTGTCTATCTTAATTTATCA+TGG | + | chr7.1:14590763-14590782 | MS.gene017969:intron | 25.0% |
| ! | TATCTTCAAAATAGATTCGT+TGG | - | chr7.1:14588428-14588447 | None:intergenic | 25.0% |
| ! | TATTATAGGTGTAGTATTGT+AGG | + | chr7.1:14588900-14588919 | MS.gene017969:intron | 25.0% |
| ! | TATTGATCTAAATGAACCTA+GGG | + | chr7.1:14589678-14589697 | MS.gene017969:intron | 25.0% |
| ! | TCTCTTAATGGCTTAAAATT+TGG | + | chr7.1:14588402-14588421 | MS.gene017969:CDS | 25.0% |
| ! | TTAGTGAGAATTAGTACTAT+TGG | + | chr7.1:14589924-14589943 | MS.gene017969:intron | 25.0% |
| ! | TTATTGATCTAAATGAACCT+AGG | + | chr7.1:14589677-14589696 | MS.gene017969:intron | 25.0% |
| ! | TTCAACTTGTACTAAATTTC+TGG | + | chr7.1:14591116-14591135 | MS.gene017969:intron | 25.0% |
| !! | AAATTTTAAGCCATTAAGAG+AGG | - | chr7.1:14588403-14588422 | None:intergenic | 25.0% |
| !! | AACCAACATTCTTATGTTTT+AGG | + | chr7.1:14590561-14590580 | MS.gene017969:intron | 25.0% |
| !! | AAGAATCAAATTCTCTGAAA+AGG | - | chr7.1:14589159-14589178 | None:intergenic | 25.0% |
| !! | AATTTCTCAGACTAAGTTTT+GGG | - | chr7.1:14591229-14591248 | None:intergenic | 25.0% |
| !! | ACTTTCAGTTTTTGTTCAAT+TGG | + | chr7.1:14591087-14591106 | MS.gene017969:intron | 25.0% |
| !! | ATTTTATTCTGTTATTCTCC+GGG | + | chr7.1:14588869-14588888 | MS.gene017969:intron | 25.0% |
| !! | CACACATATCATTTTCATAA+AGG | - | chr7.1:14589444-14589463 | None:intergenic | 25.0% |
| !! | TGCTTTTGATAAGTTTGATT+TGG | + | chr7.1:14589054-14589073 | MS.gene017969:intron | 25.0% |
| !!! | GCTTTTGATAAGTTTGATTT+GGG | + | chr7.1:14589055-14589074 | MS.gene017969:intron | 25.0% |
| AAAACGACATAAACTACACT+TGG | - | chr7.1:14590255-14590274 | None:intergenic | 30.0% | |
| AAACTAAAGGAAAGATCAGT+AGG | + | chr7.1:14590647-14590666 | MS.gene017969:intron | 30.0% | |
| AATCTAATTCTCAGCGTTTA+TGG | + | chr7.1:14590471-14590490 | MS.gene017969:intron | 30.0% | |
| AGAAGAAAAAGAGGAAATAG+GGG | - | chr7.1:14588723-14588742 | None:intergenic | 30.0% | |
| CCTGCCTAAAAAATAACATA+AGG | - | chr7.1:14590591-14590610 | None:intergenic | 30.0% | |
| CTCTGATATGTAGTAAGTTA+AGG | + | chr7.1:14590328-14590347 | MS.gene017969:intron | 30.0% | |
| CTGATAAAATGTGTATGGTA+AGG | + | chr7.1:14588757-14588776 | MS.gene017969:intron | 30.0% | |
| CTTAACTTACTACATATCAG+AGG | - | chr7.1:14590330-14590349 | None:intergenic | 30.0% | |
| GAACAAAAACTGAAAGTAGA+GGG | - | chr7.1:14591084-14591103 | None:intergenic | 30.0% | |
| GAAGAAGAAAAAGAGGAAAT+AGG | - | chr7.1:14588725-14588744 | None:intergenic | 30.0% | |
| GAATCTCAAATTTCTTCGAT+AGG | + | chr7.1:14590738-14590757 | MS.gene017969:intron | 30.0% | |
| GGAAAAAAACAAAGTACAAC+CGG | - | chr7.1:14589092-14589111 | None:intergenic | 30.0% | |
| GTGTTAACAAGTCAGTTATA+TGG | - | chr7.1:14589903-14589922 | None:intergenic | 30.0% | |
| TCAAGTTTCAAACAATTACG+AGG | + | chr7.1:14591553-14591572 | MS.gene017969:CDS | 30.0% | |
| TCATACTATGTTATCCTGTT+TGG | + | chr7.1:14588936-14588955 | MS.gene017969:intron | 30.0% | |
| TCTTCTGTCAAATCAAACAT+GGG | + | chr7.1:14591427-14591446 | MS.gene017969:CDS | 30.0% | |
| TGAACAAAAACTGAAAGTAG+AGG | - | chr7.1:14591085-14591104 | None:intergenic | 30.0% | |
| TGCCTAAAACATAAGAATGT+TGG | - | chr7.1:14590566-14590585 | None:intergenic | 30.0% | |
| ! | AACATAAGAATGTTGGTTGT+TGG | - | chr7.1:14590559-14590578 | None:intergenic | 30.0% |
| ! | AAGTTTTTGACCACAAGATT+CGG | + | chr7.1:14590142-14590161 | MS.gene017969:intron | 30.0% |
| ! | ATTGTTTGAAACTTGATGCA+TGG | - | chr7.1:14591549-14591568 | None:intergenic | 30.0% |
| ! | GAATTTCTCAGACTAAGTTT+TGG | - | chr7.1:14591230-14591249 | None:intergenic | 30.0% |
| ! | TAGGATACAATTTTCAACCT+TGG | - | chr7.1:14590293-14590312 | None:intergenic | 30.0% |
| !! | AAAAAAGTTCTGGTTTAGGA+TGG | + | chr7.1:14589402-14589421 | MS.gene017969:intron | 30.0% |
| !! | AGAGGTGTACTATTTTACTT+AGG | - | chr7.1:14590312-14590331 | None:intergenic | 30.0% |
| !! | CAAACAAGCATGTATTTTAG+AGG | + | chr7.1:14590092-14590111 | MS.gene017969:intron | 30.0% |
| !!! | AAGCATTTTAAAGCTAAGAC+AGG | - | chr7.1:14589113-14589132 | None:intergenic | 30.0% |
| !!! | AGTGTAGTTTATGTCGTTTT+AGG | + | chr7.1:14590255-14590274 | MS.gene017969:intron | 30.0% |
| !!! | ATTTTGAGACTAGACTGATT+GGG | + | chr7.1:14590676-14590695 | MS.gene017969:intron | 30.0% |
| !!! | CAGCCCTTATGTTATTTTTT+AGG | + | chr7.1:14590584-14590603 | MS.gene017969:intron | 30.0% |
| !!! | CCTTATGTTATTTTTTAGGC+AGG | + | chr7.1:14590588-14590607 | MS.gene017969:intron | 30.0% |
| !!! | TATGTTATTTTTTAGGCAGG+CGG | + | chr7.1:14590591-14590610 | MS.gene017969:intron | 30.0% |
| !!! | TATTTTGAGACTAGACTGAT+TGG | + | chr7.1:14590675-14590694 | MS.gene017969:intron | 30.0% |
| !!! | TCCGGGTTTTATTGTATTAT+AGG | + | chr7.1:14588886-14588905 | MS.gene017969:intron | 30.0% |
| !!! | TTTATGTCGTTTTAGGCTTA+TGG | + | chr7.1:14590262-14590281 | MS.gene017969:intron | 30.0% |
| AAAAACAGATGAAGAAAGCC+TGG | - | chr7.1:14591027-14591046 | None:intergenic | 35.0% | |
| AAAGGAAGTTCTTGAGCTAA+TGG | + | chr7.1:14589520-14589539 | MS.gene017969:intron | 35.0% | |
| AAATGAACCTAGGGTTCTTA+AGG | + | chr7.1:14589687-14589706 | MS.gene017969:intron | 35.0% | |
| AAGGAAGTTCTTGAGCTAAT+GGG | + | chr7.1:14589521-14589540 | MS.gene017969:intron | 35.0% | |
| ACGACTACGACTATCATAAT+TGG | + | chr7.1:14590118-14590137 | MS.gene017969:intron | 35.0% | |
| ACTATGTTATCCTGTTTGGT+CGG | + | chr7.1:14588940-14588959 | MS.gene017969:intron | 35.0% | |
| AGAGGAAATAGGGGTTAAAA+AGG | - | chr7.1:14588714-14588733 | None:intergenic | 35.0% | |
| AGCTAATGGGGAAATGAAAA+AGG | + | chr7.1:14589534-14589553 | MS.gene017969:intron | 35.0% | |
| ATATGGATGTAGAACATTCC+AGG | + | chr7.1:14591669-14591688 | MS.gene017969:CDS | 35.0% | |
| ATCAAGGAAAAAGAAGTTGC+CGG | + | chr7.1:14590931-14590950 | MS.gene017969:CDS | 35.0% | |
| ATGTGTATGGTAAGGACATT+AGG | + | chr7.1:14588765-14588784 | MS.gene017969:intron | 35.0% | |
| ATGTTATTCAATCCAGGACT+TGG | - | chr7.1:14591470-14591489 | None:intergenic | 35.0% | |
| ATTAGTACTATTGGTGTAGC+TGG | + | chr7.1:14589933-14589952 | MS.gene017969:intron | 35.0% | |
| ATTCTTGAGCAATGGTAACA+TGG | - | chr7.1:14590841-14590860 | None:intergenic | 35.0% | |
| CAAAATGAAAGCAAAAGACC+TGG | - | chr7.1:14589974-14589993 | None:intergenic | 35.0% | |
| CGTTCTGTTTAGTGTATATG+TGG | + | chr7.1:14590179-14590198 | MS.gene017969:intron | 35.0% | |
| CTCTTCTGTCAAATCAAACA+TGG | + | chr7.1:14591426-14591445 | MS.gene017969:CDS | 35.0% | |
| CTTCTGTCAAATCAAACATG+GGG | + | chr7.1:14591428-14591447 | MS.gene017969:CDS | 35.0% | |
| GAGGAAATAGGGGTTAAAAA+GGG | - | chr7.1:14588713-14588732 | None:intergenic | 35.0% | |
| TAGACTCCTACATACCTAAA+CGG | - | chr7.1:14589330-14589349 | None:intergenic | 35.0% | |
| TAGGCTGCAGTTATGTTATT+AGG | + | chr7.1:14590526-14590545 | MS.gene017969:intron | 35.0% | |
| TATAATTGAACCGACCAAAC+AGG | - | chr7.1:14588953-14588972 | None:intergenic | 35.0% | |
| TATGGATGTAGAACATTCCA+GGG | + | chr7.1:14591670-14591689 | MS.gene017969:CDS | 35.0% | |
| TCTTGTACTTCAGTTGTGTT+AGG | + | chr7.1:14589205-14589224 | MS.gene017969:intron | 35.0% | |
| TGACCATTGAGAAGATTCAT+AGG | - | chr7.1:14591696-14591715 | None:intergenic | 35.0% | |
| TGTGTATGGTAAGGACATTA+GGG | + | chr7.1:14588766-14588785 | MS.gene017969:intron | 35.0% | |
| TTCAGCATGTTATTCAATCC+AGG | - | chr7.1:14591476-14591495 | None:intergenic | 35.0% | |
| ! | AGGCTTTCTTCATCTGTTTT+TGG | + | chr7.1:14591026-14591045 | MS.gene017969:CDS | 35.0% |
| ! | GTACTTACCTTTTCTTGACT+CGG | + | chr7.1:14590038-14590057 | MS.gene017969:intron | 35.0% |
| ! | GTGTGAGATTTTGTTCCTTT+TGG | + | chr7.1:14589461-14589480 | MS.gene017969:intron | 35.0% |
| !! | ACAAGCATGTATTTTAGAGG+TGG | + | chr7.1:14590095-14590114 | MS.gene017969:intron | 35.0% |
| !! | TCTTCTTCTGGTTCAAAGAA+AGG | + | chr7.1:14588504-14588523 | MS.gene017969:CDS | 35.0% |
| !!! | ATACTTTGGTGTTTTGAGTC+TGG | + | chr7.1:14589301-14589320 | MS.gene017969:intron | 35.0% |
| AAGCTCACAGATTCTTGGAA+AGG | + | chr7.1:14590706-14590725 | MS.gene017969:intron | 40.0% | |
| AGAAGAAGAACTAGCAGCAA+TGG | - | chr7.1:14588487-14588506 | None:intergenic | 40.0% | |
| AGACCAGAAACAGTAACAGT+AGG | - | chr7.1:14588654-14588673 | None:intergenic | 40.0% | |
| AGACTCCTACATACCTAAAC+GGG | - | chr7.1:14589329-14589348 | None:intergenic | 40.0% | |
| AGATGTAGGAAGTTGTGTCA+TGG | - | chr7.1:14591513-14591532 | None:intergenic | 40.0% | |
| AGGAAGTTCTTGAGCTAATG+GGG | + | chr7.1:14589522-14589541 | MS.gene017969:intron | 40.0% | |
| ATATGGTACGCACACTAACA+TGG | - | chr7.1:14589886-14589905 | None:intergenic | 40.0% | |
| ATTGTTGTGGTCTGATTTCC+GGG | - | chr7.1:14591263-14591282 | None:intergenic | 40.0% | |
| CAACTTCCTACATCTTCTCA+TGG | + | chr7.1:14591518-14591537 | MS.gene017969:CDS | 40.0% | |
| CAGTGACGCATTGTATATTC+TGG | - | chr7.1:14589276-14589295 | None:intergenic | 40.0% | |
| CTACCAAACCTTGCAAGAAA+AGG | - | chr7.1:14591328-14591347 | None:intergenic | 40.0% | |
| GAAAGCAAAAGACCTGGATT+GGG | - | chr7.1:14589968-14589987 | None:intergenic | 40.0% | |
| GAACACTAAAGAGGACCAAA+AGG | - | chr7.1:14589479-14589498 | None:intergenic | 40.0% | |
| GACCAGAAACAGTAACAGTA+GGG | - | chr7.1:14588653-14588672 | None:intergenic | 40.0% | |
| GACGAACAATTCTTGAGCAA+TGG | - | chr7.1:14590849-14590868 | None:intergenic | 40.0% | |
| GATTGTTGTGGTCTGATTTC+CGG | - | chr7.1:14591264-14591283 | None:intergenic | 40.0% | |
| GGAAATCAGACCACAACAAT+CGG | + | chr7.1:14591263-14591282 | MS.gene017969:CDS | 40.0% | |
| GGTATGTAGGAGTCTAGAAA+AGG | + | chr7.1:14589334-14589353 | MS.gene017969:intron | 40.0% | |
| GTATCATGTGGCACTTGTAA+AGG | + | chr7.1:14589502-14589521 | MS.gene017969:intron | 40.0% | |
| GTTCAAAGAAAGGAAGAGGT+GGG | + | chr7.1:14588514-14588533 | MS.gene017969:CDS | 40.0% | |
| TATCCTACCGAGTCAAGAAA+AGG | - | chr7.1:14590048-14590067 | None:intergenic | 40.0% | |
| TATGGTACGCACACTAACAT+GGG | - | chr7.1:14589885-14589904 | None:intergenic | 40.0% | |
| TCAGCAAGCTGATGAAATCT+GGG | - | chr7.1:14590906-14590925 | None:intergenic | 40.0% | |
| TGAAAGCAAAAGACCTGGAT+TGG | - | chr7.1:14589969-14589988 | None:intergenic | 40.0% | |
| TGATACCAGGAACACTAAAG+AGG | - | chr7.1:14589488-14589507 | None:intergenic | 40.0% | |
| TGCAAGAAAAGGTTGTCAGA+TGG | - | chr7.1:14591317-14591336 | None:intergenic | 40.0% | |
| TGCTAATGAGAGTTTGAGAG+TGG | + | chr7.1:14589739-14589758 | MS.gene017969:intron | 40.0% | |
| TTAGTGTTCCTGGTATCATG+TGG | + | chr7.1:14589490-14589509 | MS.gene017969:intron | 40.0% | |
| TTCAACATTCTCAACCACCT+CGG | + | chr7.1:14588541-14588560 | MS.gene017969:CDS | 40.0% | |
| TTGATTTATCTGGTCTGCCA+TGG | + | chr7.1:14589371-14589390 | MS.gene017969:intron | 40.0% | |
| TTTCCAAGAATCTGTGAGCT+TGG | - | chr7.1:14590707-14590726 | None:intergenic | 40.0% | |
| ! | CAACCTTTTCTTGCAAGGTT+TGG | + | chr7.1:14591322-14591341 | MS.gene017969:CDS | 40.0% |
| ! | GCTAGTTCTTCTTCTTCTTC+TGG | + | chr7.1:14588492-14588511 | MS.gene017969:CDS | 40.0% |
| ! | TACTTGGCACTTTTATCGAC+AGG | + | chr7.1:14591158-14591177 | MS.gene017969:intron | 40.0% |
| ! | TCTGACAACCTTTTCTTGCA+AGG | + | chr7.1:14591317-14591336 | MS.gene017969:CDS | 40.0% |
| ! | TCTGGTTCAAAGAAAGGAAG+AGG | + | chr7.1:14588510-14588529 | MS.gene017969:CDS | 40.0% |
| !! | CTGTTTCTGGTCTACAACAA+AGG | + | chr7.1:14588661-14588680 | MS.gene017969:CDS | 40.0% |
| !! | CTTTTCTTGCAAGGTTTGGT+AGG | + | chr7.1:14591326-14591345 | MS.gene017969:CDS | 40.0% |
| !! | GATTTGGGTTGATTGTGTTC+CGG | + | chr7.1:14589070-14589089 | MS.gene017969:intron | 40.0% |
| !! | GGTTTTGTCAACAATGTAGC+AGG | + | chr7.1:14588682-14588701 | MS.gene017969:CDS | 40.0% |
| !!! | TTACCTTTTCTTGACTCGGT+AGG | + | chr7.1:14590042-14590061 | MS.gene017969:intron | 40.0% |
| AAGCTGATGAAATCTGGGCA+AGG | - | chr7.1:14590901-14590920 | None:intergenic | 45.0% | |
| ACCACAAGATTCGGAGAACA+TGG | + | chr7.1:14590151-14590170 | MS.gene017969:intron | 45.0% | |
| ACCATGTTCTCCGAATCTTG+TGG | - | chr7.1:14590155-14590174 | None:intergenic | 45.0% | |
| ACTACACTTGGAACAAGCAC+CGG | - | chr7.1:14590243-14590262 | None:intergenic | 45.0% | |
| ACTCCAGTGTAAGTTTCCTC+GGG | - | chr7.1:14591383-14591402 | None:intergenic | 45.0% | |
| AGAAATTCACTTCCACCACC+CGG | + | chr7.1:14591242-14591261 | MS.gene017969:CDS | 45.0% | |
| AGAAGAACTAGCAGCAATGG+TGG | - | chr7.1:14588484-14588503 | None:intergenic | 45.0% | |
| AGACCAAGCTCACAGATTCT+TGG | + | chr7.1:14590701-14590720 | MS.gene017969:intron | 45.0% | |
| ATCAGACCACAACAATCGGT+TGG | + | chr7.1:14591267-14591286 | MS.gene017969:CDS | 45.0% | |
| ATGAAATCTGGGCAAGGTTG+TGG | - | chr7.1:14590895-14590914 | None:intergenic | 45.0% | |
| ATGCAGACCTTAAGAACCCT+AGG | - | chr7.1:14589697-14589716 | None:intergenic | 45.0% | |
| CTCAGCAAGCTGATGAAATC+TGG | - | chr7.1:14590907-14590926 | None:intergenic | 45.0% | |
| CTCGGTAGGATAGTGTTCAA+TGG | + | chr7.1:14590056-14590075 | MS.gene017969:intron | 45.0% | |
| GACTCCAGTGTAAGTTTCCT+CGG | - | chr7.1:14591384-14591403 | None:intergenic | 45.0% | |
| GACTCCTACATACCTAAACG+GGG | - | chr7.1:14589328-14589347 | None:intergenic | 45.0% | |
| GCGTCACTGAGCATATACTT+TGG | + | chr7.1:14589287-14589306 | MS.gene017969:intron | 45.0% | |
| GCTCAAGAATTGTTCGTCTC+TGG | + | chr7.1:14590851-14590870 | MS.gene017969:intron | 45.0% | |
| GGGCCTATGAATCTTCTCAA+TGG | + | chr7.1:14591690-14591709 | MS.gene017969:CDS | 45.0% | |
| GGTTCAAAGAAAGGAAGAGG+TGG | + | chr7.1:14588513-14588532 | MS.gene017969:CDS | 45.0% | |
| GTGTAGCTGCAATAGCTTTC+CGG | + | chr7.1:14590221-14590240 | MS.gene017969:intron | 45.0% | |
| TACAAGTGCCACATGATACC+AGG | - | chr7.1:14589501-14589520 | None:intergenic | 45.0% | |
| TCATGCTATCGTGTGGTCAT+TGG | + | chr7.1:14589767-14589786 | MS.gene017969:intron | 45.0% | |
| TCCTACATCTTCTCATGGTG+TGG | + | chr7.1:14591523-14591542 | MS.gene017969:CDS | 45.0% | |
| TCGGAAGAGTCCTCTCTTAA+TGG | + | chr7.1:14588390-14588409 | MS.gene017969:CDS | 45.0% | |
| TGCCCTACTGTTACTGTTTC+TGG | + | chr7.1:14588648-14588667 | MS.gene017969:CDS | 45.0% | |
| TTAGGCTTATGGCTCATCCA+AGG | + | chr7.1:14590273-14590292 | MS.gene017969:intron | 45.0% | |
| TTCAGGAGGCAACTCTTCTT+CGG | + | chr7.1:14588371-14588390 | MS.gene017969:CDS | 45.0% | |
| TTGAGAAGATTCATAGGCCC+TGG | - | chr7.1:14591690-14591709 | None:intergenic | 45.0% | |
| TTGGTCCTCTTTAGTGTTCC+TGG | + | chr7.1:14589480-14589499 | MS.gene017969:intron | 45.0% | |
| ! | TCTTAACCTCACGTTTTGCC+AGG | + | chr7.1:14591006-14591025 | MS.gene017969:CDS | 45.0% |
| ! | TCTTGCAAGGTTTGGTAGGT+GGG | + | chr7.1:14591330-14591349 | MS.gene017969:CDS | 45.0% |
| ! | TTCTTGCAAGGTTTGGTAGG+TGG | + | chr7.1:14591329-14591348 | MS.gene017969:CDS | 45.0% |
| !! | CAGCTTGCTGAGTTTGATCA+AGG | + | chr7.1:14590915-14590934 | MS.gene017969:CDS | 45.0% |
| !! | TATTATATTATATTAATGTT+AGG | + | chr7.1:14590507-14590526 | MS.gene017969:intron | 5.0% |
| ACAGGTAACAGTGACAGAGG+TGG | + | chr7.1:14591176-14591195 | MS.gene017969:intron | 50.0% | |
| ACGTGAGGTTAAGAGAGAGC+TGG | - | chr7.1:14591000-14591019 | None:intergenic | 50.0% | |
| AGAAAGCCTGGCAAAACGTG+AGG | - | chr7.1:14591015-14591034 | None:intergenic | 50.0% | |
| AGGTTAAGAGAGAGCTGGGT+GGG | - | chr7.1:14590995-14591014 | None:intergenic | 50.0% | |
| CATCCTTCAACTTGACACCG+AGG | - | chr7.1:14588561-14588580 | None:intergenic | 50.0% | |
| CGTGAGGTTAAGAGAGAGCT+GGG | - | chr7.1:14590999-14591018 | None:intergenic | 50.0% | |
| GCCACACCATGAGAAGATGT+AGG | - | chr7.1:14591527-14591546 | None:intergenic | 50.0% | |
| GGTCACATTTCACAGCCTCT+CGG | + | chr7.1:14591596-14591615 | MS.gene017969:CDS | 50.0% | |
| GTACGCACACTAACATGGGT+TGG | - | chr7.1:14589881-14589900 | None:intergenic | 50.0% | |
| TATGACCAGCTAGTCGTCTC+CGG | - | chr7.1:14590953-14590972 | None:intergenic | 50.0% | |
| TCGACAGGTAACAGTGACAG+AGG | + | chr7.1:14591173-14591192 | MS.gene017969:intron | 50.0% | |
| TGGATAGTGCAACCCAATCC+AGG | + | chr7.1:14589953-14589972 | MS.gene017969:intron | 50.0% | |
| TGGTCCCCGTTTAGGTATGT+AGG | + | chr7.1:14589321-14589340 | MS.gene017969:intron | 50.0% | |
| TTTGAGTCTGGTCCCCGTTT+AGG | + | chr7.1:14589313-14589332 | MS.gene017969:intron | 50.0% | |
| !! | GCAGGGAAGGAGGCATTATA+TGG | + | chr7.1:14591652-14591671 | MS.gene017969:CDS | 50.0% |
| AATGTGACCCCGGCCAAGAT+CGG | - | chr7.1:14591585-14591604 | None:intergenic | 55.0% | |
| AGTTTCCTCGGGAGGATGTC+TGG | - | chr7.1:14591372-14591391 | None:intergenic | 55.0% | |
| CAGAGGTGGCAGCTTCTTGA+TGG | + | chr7.1:14591190-14591209 | MS.gene017969:CDS | 55.0% | |
| CCAAGGCCAACCGATTGTTG+TGG | - | chr7.1:14591276-14591295 | None:intergenic | 55.0% | |
| CCAGTGTAAGTTTCCTCGGG+AGG | - | chr7.1:14591380-14591399 | None:intergenic | 55.0% | |
| CCTCCCGAGGAAACTTACAC+TGG | + | chr7.1:14591377-14591396 | MS.gene017969:CDS | 55.0% | |
| CCTTCAACTTGACACCGAGG+TGG | - | chr7.1:14588558-14588577 | None:intergenic | 55.0% | |
| CGAAACGCAGAACCAAGTCC+TGG | + | chr7.1:14591455-14591474 | MS.gene017969:CDS | 55.0% | |
| GAGCTTGATCTGTCGCAGCA+GGG | + | chr7.1:14591635-14591654 | MS.gene017969:CDS | 55.0% | |
| GAGGCTGTGAAATGTGACCC+CGG | - | chr7.1:14591595-14591614 | None:intergenic | 55.0% | |
| GAGGTTAAGAGAGAGCTGGG+TGG | - | chr7.1:14590996-14591015 | None:intergenic | 55.0% | |
| GATCAAGCTCGCCAGAGAGT+TGG | - | chr7.1:14591625-14591644 | None:intergenic | 55.0% | |
| GGCTGCATCATGCTATCGTG+TGG | + | chr7.1:14589760-14589779 | MS.gene017969:intron | 55.0% | |
| GGTTAAGAGAGAGCTGGGTG+GGG | - | chr7.1:14590994-14591013 | None:intergenic | 55.0% | |
| GTTAAGAGAGAGCTGGGTGG+GGG | - | chr7.1:14590993-14591012 | None:intergenic | 55.0% | |
| GTTGTGGTCTGATTTCCGGG+TGG | - | chr7.1:14591260-14591279 | None:intergenic | 55.0% | |
| TACGAGGTTTCCCCCGATCT+TGG | + | chr7.1:14591569-14591588 | MS.gene017969:CDS | 55.0% | |
| TTGATCTGTCGCAGCAGGGA+AGG | + | chr7.1:14591639-14591658 | MS.gene017969:CDS | 55.0% | |
| !! | AACAATCGGTTGGCCTTGGC+CGG | + | chr7.1:14591277-14591296 | MS.gene017969:CDS | 55.0% |
| !! | CCACAACAATCGGTTGGCCT+TGG | + | chr7.1:14591273-14591292 | MS.gene017969:CDS | 55.0% |
| !! | CCACCTCGGTGTCAAGTTGA+AGG | + | chr7.1:14588555-14588574 | MS.gene017969:CDS | 55.0% |
| AGGTTTCCCCCGATCTTGGC+CGG | + | chr7.1:14591573-14591592 | MS.gene017969:CDS | 60.0% | |
| AGTTGCCGGAGACGACTAGC+TGG | + | chr7.1:14590945-14590964 | MS.gene017969:CDS | 60.0% | |
| ATCTGTCGCAGCAGGGAAGG+AGG | + | chr7.1:14591642-14591661 | MS.gene017969:CDS | 60.0% | |
| ATGTGACCCCGGCCAAGATC+GGG | - | chr7.1:14591584-14591603 | None:intergenic | 60.0% | |
| CCAGAGAGTTGGCTACCGAG+AGG | - | chr7.1:14591614-14591633 | None:intergenic | 60.0% | |
| CCTCTCGGTAGCCAACTCTC+TGG | + | chr7.1:14591611-14591630 | MS.gene017969:CDS | 60.0% | |
| CGAGCTTGATCTGTCGCAGC+AGG | + | chr7.1:14591634-14591653 | MS.gene017969:CDS | 60.0% | |
| GTAGGTGGGACAAGCTTCCC+TGG | + | chr7.1:14591344-14591363 | MS.gene017969:CDS | 60.0% | |
| GTGGTCTGATTTCCGGGTGG+TGG | - | chr7.1:14591257-14591276 | None:intergenic | 60.0% | |
| !! | ACAATCGGTTGGCCTTGGCC+GGG | + | chr7.1:14591278-14591297 | MS.gene017969:CDS | 60.0% |
| CGGGAGGATGTCTGGCACCA+GGG | - | chr7.1:14591364-14591383 | None:intergenic | 65.0% | |
| GATGGCGACTCCGTGTTCCC+CGG | - | chr7.1:14591299-14591318 | None:intergenic | 65.0% | |
| GGTTTCCCCCGATCTTGGCC+GGG | + | chr7.1:14591574-14591593 | MS.gene017969:CDS | 65.0% | |
| GTTTCCCCCGATCTTGGCCG+GGG | + | chr7.1:14591575-14591594 | MS.gene017969:CDS | 65.0% | |
| TCGGGAGGATGTCTGGCACC+AGG | - | chr7.1:14591365-14591384 | None:intergenic | 65.0% | |
| TGTGACCCCGGCCAAGATCG+GGG | - | chr7.1:14591583-14591602 | None:intergenic | 65.0% | |
| ! | TGGTGCCAGACATCCTCCCG+AGG | + | chr7.1:14591364-14591383 | MS.gene017969:CDS | 65.0% |
| !! | CAATCGGTTGGCCTTGGCCG+GGG | + | chr7.1:14591279-14591298 | MS.gene017969:CDS | 65.0% |
| !! | TTGGCCTTGGCCGGGGAACA+CGG | + | chr7.1:14591286-14591305 | MS.gene017969:CDS | 65.0% |
| GACTCCGTGTTCCCCGGCCA+AGG | - | chr7.1:14591293-14591312 | None:intergenic | 70.0% | |
| GTGACCCCGGCCAAGATCGG+GGG | - | chr7.1:14591582-14591601 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 14588366 | 14591721 | 14588366 | ID=MS.gene017969 |
| chr7.1 | mRNA | 14588366 | 14591721 | 14588366 | ID=MS.gene017969.t1;Parent=MS.gene017969 |
| chr7.1 | exon | 14588366 | 14588703 | 14588366 | ID=MS.gene017969.t1.exon1;Parent=MS.gene017969.t1 |
| chr7.1 | CDS | 14588366 | 14588703 | 14588366 | ID=cds.MS.gene017969.t1;Parent=MS.gene017969.t1 |
| chr7.1 | exon | 14590908 | 14591047 | 14590908 | ID=MS.gene017969.t1.exon2;Parent=MS.gene017969.t1 |
| chr7.1 | CDS | 14590908 | 14591047 | 14590908 | ID=cds.MS.gene017969.t1;Parent=MS.gene017969.t1 |
| chr7.1 | exon | 14591180 | 14591721 | 14591180 | ID=MS.gene017969.t1.exon3;Parent=MS.gene017969.t1 |
| chr7.1 | CDS | 14591180 | 14591721 | 14591180 | ID=cds.MS.gene017969.t1;Parent=MS.gene017969.t1 |
| Gene Sequence |
| Protein sequence |