Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04608.t1 | XP_003625236.2 | 94.4 | 340 | 15 | 2 | 1 | 339 | 75 | 411 | 9.40E-148 | 533.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04608.t1 | S4WUL1 | 37.7 | 374 | 166 | 11 | 2 | 339 | 13 | 355 | 2.8e-39 | 164.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04608.t1 | G7KVB2 | 94.4 | 340 | 15 | 2 | 1 | 339 | 1 | 337 | 6.8e-148 | 533.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene04608.t1 | TF | SBP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene018772 | MS.gene04608 | PPI |
| MS.gene04607 | MS.gene04608 | PPI |
| MS.gene04608 | MS.gene017969 | PPI |
| MS.gene04608 | MS.gene97631 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04608.t1 | MTR_7g092930 | 90.000 | 340 | 30 | 2 | 1 | 339 | 1 | 337 | 0.0 | 562 |
| MS.gene04608.t1 | MTR_1g053715 | 55.394 | 343 | 105 | 12 | 14 | 323 | 20 | 347 | 3.21e-103 | 307 |
| MS.gene04608.t1 | MTR_3g085180 | 36.981 | 265 | 119 | 7 | 17 | 256 | 120 | 361 | 1.89e-41 | 150 |
| MS.gene04608.t1 | MTR_7g444860 | 50.376 | 133 | 61 | 1 | 14 | 146 | 101 | 228 | 8.29e-38 | 137 |
| MS.gene04608.t1 | MTR_8g463140 | 70.732 | 82 | 24 | 0 | 64 | 145 | 62 | 143 | 4.18e-37 | 132 |
| MS.gene04608.t1 | MTR_4g109770 | 52.713 | 129 | 57 | 1 | 13 | 141 | 73 | 197 | 1.80e-36 | 137 |
| MS.gene04608.t1 | MTR_4g088555 | 72.727 | 77 | 21 | 0 | 64 | 140 | 60 | 136 | 5.95e-36 | 127 |
| MS.gene04608.t1 | MTR_2g461920 | 57.252 | 131 | 53 | 3 | 39 | 169 | 144 | 271 | 9.72e-36 | 136 |
| MS.gene04608.t1 | MTR_8g080690 | 36.090 | 266 | 145 | 8 | 4 | 251 | 86 | 344 | 6.20e-35 | 131 |
| MS.gene04608.t1 | MTR_3g099080 | 52.679 | 112 | 53 | 0 | 35 | 146 | 66 | 177 | 6.94e-35 | 131 |
| MS.gene04608.t1 | MTR_5g046670 | 71.429 | 77 | 22 | 0 | 65 | 141 | 242 | 318 | 5.03e-34 | 130 |
| MS.gene04608.t1 | MTR_8g005960 | 67.857 | 84 | 27 | 0 | 57 | 140 | 177 | 260 | 1.14e-33 | 127 |
| MS.gene04608.t1 | MTR_8g080680 | 35.200 | 250 | 139 | 7 | 18 | 251 | 84 | 326 | 1.22e-33 | 128 |
| MS.gene04608.t1 | MTR_2g014200 | 65.517 | 87 | 26 | 1 | 56 | 142 | 57 | 139 | 2.78e-33 | 120 |
| MS.gene04608.t1 | MTR_2g078770 | 71.053 | 76 | 22 | 0 | 65 | 140 | 56 | 131 | 3.09e-33 | 121 |
| MS.gene04608.t1 | MTR_7g028740 | 63.636 | 88 | 32 | 0 | 62 | 149 | 72 | 159 | 5.18e-33 | 125 |
| MS.gene04608.t1 | MTR_8g096780 | 59.091 | 88 | 36 | 0 | 62 | 149 | 94 | 181 | 1.57e-31 | 122 |
| MS.gene04608.t1 | MTR_8g080670 | 48.413 | 126 | 48 | 1 | 14 | 139 | 126 | 234 | 2.54e-31 | 122 |
| MS.gene04608.t1 | MTR_2g046550 | 51.261 | 119 | 51 | 1 | 52 | 170 | 124 | 235 | 2.65e-31 | 125 |
| MS.gene04608.t1 | MTR_1g086250 | 51.111 | 135 | 59 | 3 | 10 | 140 | 89 | 220 | 2.81e-31 | 125 |
| MS.gene04608.t1 | MTR_1g035010 | 58.333 | 96 | 40 | 0 | 51 | 146 | 88 | 183 | 1.45e-30 | 122 |
| MS.gene04608.t1 | MTR_7g110320 | 68.919 | 74 | 23 | 0 | 67 | 140 | 145 | 218 | 2.88e-29 | 119 |
| MS.gene04608.t1 | MTR_7g110320 | 68.919 | 74 | 23 | 0 | 67 | 140 | 145 | 218 | 4.67e-29 | 118 |
| MS.gene04608.t1 | MTR_2g020620 | 48.529 | 68 | 35 | 0 | 73 | 140 | 96 | 163 | 1.13e-16 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04608.t1 | AT2G42200 | 42.708 | 384 | 119 | 17 | 17 | 339 | 32 | 375 | 4.22e-67 | 215 |
| MS.gene04608.t1 | AT3G57920 | 39.516 | 372 | 132 | 16 | 17 | 339 | 27 | 354 | 1.04e-62 | 203 |
| MS.gene04608.t1 | AT1G27370 | 47.887 | 142 | 56 | 3 | 8 | 141 | 119 | 250 | 4.76e-37 | 136 |
| MS.gene04608.t1 | AT5G43270 | 55.469 | 128 | 56 | 1 | 16 | 143 | 119 | 245 | 7.41e-37 | 137 |
| MS.gene04608.t1 | AT5G43270 | 55.469 | 128 | 56 | 1 | 16 | 143 | 119 | 245 | 7.41e-37 | 137 |
| MS.gene04608.t1 | AT5G43270 | 55.469 | 128 | 56 | 1 | 16 | 143 | 119 | 245 | 7.41e-37 | 137 |
| MS.gene04608.t1 | AT1G27370 | 47.887 | 142 | 56 | 3 | 8 | 141 | 119 | 250 | 1.75e-36 | 135 |
| MS.gene04608.t1 | AT1G27370 | 47.887 | 142 | 56 | 3 | 8 | 141 | 119 | 250 | 1.75e-36 | 135 |
| MS.gene04608.t1 | AT1G27370 | 47.887 | 142 | 56 | 3 | 8 | 141 | 119 | 250 | 1.75e-36 | 135 |
| MS.gene04608.t1 | AT1G27370 | 47.887 | 142 | 56 | 3 | 8 | 141 | 119 | 250 | 1.75e-36 | 135 |
| MS.gene04608.t1 | AT1G27370 | 47.887 | 142 | 56 | 3 | 8 | 141 | 119 | 250 | 1.75e-36 | 135 |
| MS.gene04608.t1 | AT1G27370 | 47.887 | 142 | 56 | 3 | 8 | 141 | 119 | 250 | 1.75e-36 | 135 |
| MS.gene04608.t1 | AT1G69170 | 54.015 | 137 | 51 | 3 | 51 | 185 | 109 | 235 | 2.68e-36 | 135 |
| MS.gene04608.t1 | AT1G27360 | 50.000 | 134 | 64 | 2 | 8 | 141 | 119 | 249 | 4.21e-36 | 135 |
| MS.gene04608.t1 | AT1G27360 | 50.000 | 134 | 64 | 2 | 8 | 141 | 119 | 249 | 4.21e-36 | 135 |
| MS.gene04608.t1 | AT1G27360 | 50.000 | 134 | 64 | 2 | 8 | 141 | 119 | 249 | 4.21e-36 | 135 |
| MS.gene04608.t1 | AT1G27360 | 50.000 | 134 | 64 | 2 | 8 | 141 | 119 | 249 | 4.21e-36 | 135 |
| MS.gene04608.t1 | AT2G33810 | 71.622 | 74 | 21 | 0 | 67 | 140 | 54 | 127 | 8.81e-35 | 124 |
| MS.gene04608.t1 | AT5G50670 | 48.000 | 150 | 71 | 2 | 4 | 146 | 31 | 180 | 2.45e-34 | 129 |
| MS.gene04608.t1 | AT5G50670 | 48.000 | 150 | 71 | 2 | 4 | 146 | 31 | 180 | 2.45e-34 | 129 |
| MS.gene04608.t1 | AT5G50570 | 48.000 | 150 | 71 | 2 | 4 | 146 | 31 | 180 | 2.45e-34 | 129 |
| MS.gene04608.t1 | AT5G50570 | 48.000 | 150 | 71 | 2 | 4 | 146 | 31 | 180 | 2.45e-34 | 129 |
| MS.gene04608.t1 | AT1G02065 | 52.800 | 125 | 48 | 2 | 16 | 140 | 148 | 261 | 8.79e-34 | 127 |
| MS.gene04608.t1 | AT3G15270 | 68.919 | 74 | 23 | 0 | 67 | 140 | 63 | 136 | 1.71e-33 | 122 |
| MS.gene04608.t1 | AT1G53160 | 46.667 | 135 | 55 | 3 | 55 | 187 | 47 | 166 | 9.41e-33 | 120 |
| MS.gene04608.t1 | AT1G53160 | 61.538 | 91 | 30 | 1 | 55 | 145 | 47 | 132 | 2.70e-32 | 119 |
| MS.gene04608.t1 | AT1G53160 | 61.538 | 91 | 30 | 1 | 55 | 145 | 47 | 132 | 2.70e-32 | 119 |
| MS.gene04608.t1 | AT2G47070 | 62.366 | 93 | 28 | 1 | 51 | 143 | 97 | 182 | 4.44e-32 | 127 |
| MS.gene04608.t1 | AT3G60030 | 49.587 | 121 | 61 | 0 | 26 | 146 | 86 | 206 | 5.91e-32 | 127 |
| MS.gene04608.t1 | AT1G76580 | 60.227 | 88 | 35 | 0 | 65 | 152 | 112 | 199 | 2.45e-30 | 122 |
| MS.gene04608.t1 | AT1G76580 | 60.227 | 88 | 35 | 0 | 65 | 152 | 112 | 199 | 2.62e-30 | 122 |
| MS.gene04608.t1 | AT1G76580 | 60.227 | 88 | 35 | 0 | 65 | 152 | 112 | 199 | 3.90e-30 | 121 |
| MS.gene04608.t1 | AT1G20980 | 62.222 | 90 | 33 | 1 | 51 | 140 | 105 | 193 | 7.07e-29 | 118 |
| MS.gene04608.t1 | AT5G18830 | 46.154 | 91 | 45 | 1 | 52 | 142 | 127 | 213 | 8.45e-21 | 94.0 |
| MS.gene04608.t1 | AT5G18830 | 46.154 | 91 | 45 | 1 | 52 | 142 | 127 | 213 | 8.73e-21 | 94.0 |
| MS.gene04608.t1 | AT5G18830 | 46.154 | 91 | 45 | 1 | 52 | 142 | 127 | 213 | 9.41e-21 | 94.0 |
| MS.gene04608.t1 | AT2G47070 | 75.472 | 53 | 13 | 0 | 91 | 143 | 1 | 53 | 3.74e-20 | 92.0 |
| MS.gene04608.t1 | AT1G02065 | 45.370 | 108 | 46 | 3 | 16 | 121 | 148 | 244 | 3.29e-19 | 85.9 |
Find 96 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCCTACTGTTACTGTTTC+TGG | 0.047497 | 7.4:+15664053 | MS.gene04608:CDS |
| TCTCTTAATGGCTTAAAATT+TGG | 0.163500 | 7.4:+15663807 | MS.gene04608:CDS |
| GATTGTTGTGGTCTGATTTC+CGG | 0.239907 | 7.4:-15666661 | None:intergenic |
| TCGGAAGAGTCCTCTCTTAA+TGG | 0.276595 | 7.4:+15663795 | MS.gene04608:CDS |
| GAATTTCTCAGACTAAGTTT+TGG | 0.340913 | 7.4:-15666627 | None:intergenic |
| ATTGTTGTGGTCTGATTTCC+GGG | 0.344809 | 7.4:-15666660 | None:intergenic |
| AACCTCACACCAATGGATTC+AGG | 0.357567 | 7.4:+15663759 | None:intergenic |
| AATAACATGCTGAATTTCAA+TGG | 0.376067 | 7.4:+15666882 | MS.gene04608:CDS |
| GCAGGGAAGGAGGCATTATA+TGG | 0.380825 | 7.4:+15667052 | MS.gene04608:CDS |
| TCTTCTTCTGGTTCAAAGAA+AGG | 0.384894 | 7.4:+15663909 | MS.gene04608:CDS |
| ATGTGACCCCGGCCAAGATC+GGG | 0.400840 | 7.4:-15666981 | None:intergenic |
| CGAGCTTGATCTGTCGCAGC+AGG | 0.402927 | 7.4:+15667034 | MS.gene04608:CDS |
| AACAATCGGTTGGCCTTGGC+CGG | 0.403146 | 7.4:+15666677 | MS.gene04608:CDS |
| CAGAGGTGGCAGCTTCTTGA+TGG | 0.405708 | 7.4:+15666590 | MS.gene04608:CDS |
| TTCAGGAGGCAACTCTTCTT+CGG | 0.406824 | 7.4:+15663776 | MS.gene04608:CDS |
| AGTTTCCTCGGGAGGATGTC+TGG | 0.417156 | 7.4:-15666769 | None:intergenic |
| GACTCCAGTGTAAGTTTCCT+CGG | 0.430936 | 7.4:-15666781 | None:intergenic |
| ATATGGATGTAGAACATTCC+AGG | 0.443177 | 7.4:+15667069 | MS.gene04608:CDS |
| CTCTTCTGTCAAATCAAACA+TGG | 0.449340 | 7.4:+15666826 | MS.gene04608:CDS |
| ATGTTATTCAATCCAGGACT+TGG | 0.463473 | 7.4:-15666867 | None:intergenic |
| CAGCTTGCTGAGTTTGATCA+AGG | 0.464199 | 7.4:+15666315 | MS.gene04608:CDS |
| AATGTGACCCCGGCCAAGAT+CGG | 0.466474 | 7.4:-15666982 | None:intergenic |
| AGGTTAAGAGAGAGCTGGGT+GGG | 0.469309 | 7.4:-15666392 | None:intergenic |
| CAATCGGTTGGCCTTGGCCG+GGG | 0.476765 | 7.4:+15666679 | MS.gene04608:CDS |
| TTGGCCTTGGCCGGGGAACA+CGG | 0.477293 | 7.4:+15666686 | MS.gene04608:CDS |
| ACAATCGGTTGGCCTTGGCC+GGG | 0.480117 | 7.4:+15666678 | MS.gene04608:CDS |
| TGACCATTGAGAAGATTCAT+AGG | 0.480203 | 7.4:-15667093 | None:intergenic |
| TTCTTGCAAGGTTCGGTAGG+TGG | 0.483739 | 7.4:+15666729 | MS.gene04608:CDS |
| TTCAGCATGTTATTCAATCC+AGG | 0.487732 | 7.4:-15666873 | None:intergenic |
| TATCTTCAAAATAGATTCGT+TGG | 0.488281 | 7.4:-15663830 | None:intergenic |
| TATGACCAGCTAGTCGTCTC+CGG | 0.489324 | 7.4:-15666350 | None:intergenic |
| CTACCGAACCTTGCAAGAAA+AGG | 0.489810 | 7.4:-15666725 | None:intergenic |
| CCACAACAATCGGTTGGCCT+TGG | 0.489925 | 7.4:+15666673 | MS.gene04608:CDS |
| TTGAGAAGATTCATAGGCCC+TGG | 0.491228 | 7.4:-15667087 | None:intergenic |
| GTGGTCTGATTTCCGGGTGG+TGG | 0.494603 | 7.4:-15666654 | None:intergenic |
| GACTCCGTGTTCCCCGGCCA+AGG | 0.497185 | 7.4:-15666690 | None:intergenic |
| CCACCTCGGTGTCAAGTTGA+AGG | 0.497533 | 7.4:+15663960 | MS.gene04608:CDS |
| ATAACATGCTGAATTTCAAT+GGG | 0.498202 | 7.4:+15666883 | MS.gene04608:CDS |
| CTGTTTCTGGTCTACAACAA+AGG | 0.499773 | 7.4:+15664066 | MS.gene04608:CDS |
| CGAAACGCAGAACCAAGTCC+TGG | 0.499881 | 7.4:+15666855 | MS.gene04608:CDS |
| GGAAATCAGACCACAACAAT+CGG | 0.506712 | 7.4:+15666663 | MS.gene04608:CDS |
| GTAGGTGGGACAAGCTTCCC+TGG | 0.516239 | 7.4:+15666744 | MS.gene04608:CDS |
| TCGGGAGGATGTCTGGCACC+AGG | 0.517700 | 7.4:-15666762 | None:intergenic |
| TCTTGCAAGGTTCGGTAGGT+GGG | 0.521061 | 7.4:+15666730 | MS.gene04608:CDS |
| AGAAGAAGAACTAGCAGCAA+TGG | 0.529953 | 7.4:-15663889 | None:intergenic |
| GGTTAAGAGAGAGCTGGGTG+GGG | 0.530104 | 7.4:-15666391 | None:intergenic |
| CCTCTCGGTAGCCAACTCTC+TGG | 0.530975 | 7.4:+15667011 | MS.gene04608:CDS |
| GTTAAGAGAGAGCTGGGTGG+GGG | 0.532570 | 7.4:-15666390 | None:intergenic |
| TCTGGTTCAAAGAAAGGAAG+AGG | 0.539167 | 7.4:+15663915 | MS.gene04608:CDS |
| ACGTGAGGTTAAGAGAGAGC+TGG | 0.539304 | 7.4:-15666397 | None:intergenic |
| CGTGAGGTTAAGAGAGAGCT+GGG | 0.546066 | 7.4:-15666396 | None:intergenic |
| CGGGAGGATGTCTGGCACCA+GGG | 0.551042 | 7.4:-15666761 | None:intergenic |
| CAACTTCCTACATCTTCTCA+TGG | 0.554762 | 7.4:+15666918 | MS.gene04608:CDS |
| GATCAAGCTCGCCAGAGAGT+TGG | 0.556325 | 7.4:-15667022 | None:intergenic |
| ACTCCAGTGTAAGTTTCCTC+GGG | 0.556391 | 7.4:-15666780 | None:intergenic |
| GATGGCGACTCCGTGTTCCC+CGG | 0.557604 | 7.4:-15666696 | None:intergenic |
| TCTTCTGTCAAATCAAACAT+GGG | 0.559601 | 7.4:+15666827 | MS.gene04608:CDS |
| AGTTGCCGGAGACGACTAGC+TGG | 0.563944 | 7.4:+15666345 | MS.gene04608:CDS |
| AGAAGAACTAGCAGCAATGG+TGG | 0.566347 | 7.4:-15663886 | None:intergenic |
| GGGCCTATGAATCTTCTCAA+TGG | 0.567201 | 7.4:+15667090 | MS.gene04608:CDS |
| TCCTACATCTTCTCATGGTG+TGG | 0.568881 | 7.4:+15666923 | MS.gene04608:CDS |
| GACCAGAAACAGTAACAGTA+GGG | 0.576648 | 7.4:-15664055 | None:intergenic |
| TATGGATGTAGAACATTCCA+GGG | 0.576787 | 7.4:+15667070 | MS.gene04608:CDS |
| AGATGTAGGAAGTTGTGTCA+TGG | 0.581014 | 7.4:-15666910 | None:intergenic |
| TTGATCTGTCGCAGCAGGGA+AGG | 0.589630 | 7.4:+15667039 | MS.gene04608:CDS |
| ATCTGTCGCAGCAGGGAAGG+AGG | 0.591353 | 7.4:+15667042 | MS.gene04608:CDS |
| ATCAGACCACAACAATCGGT+TGG | 0.596554 | 7.4:+15666667 | MS.gene04608:CDS |
| AGAAATTCACTTCCACCACC+CGG | 0.604886 | 7.4:+15666642 | MS.gene04608:CDS |
| GGTCACATTTCACAGCCTCT+CGG | 0.605085 | 7.4:+15666996 | MS.gene04608:CDS |
| AGACCAGAAACAGTAACAGT+AGG | 0.606139 | 7.4:-15664056 | None:intergenic |
| TGTGACCCCGGCCAAGATCG+GGG | 0.609613 | 7.4:-15666980 | None:intergenic |
| ATTGTTTGAAACTTGATGCA+TGG | 0.609636 | 7.4:-15666946 | None:intergenic |
| GGTTCAAAGAAAGGAAGAGG+TGG | 0.614988 | 7.4:+15663918 | MS.gene04608:CDS |
| TGCAAGAAAAGGTTGTCAGA+TGG | 0.616796 | 7.4:-15666714 | None:intergenic |
| GTGACCCCGGCCAAGATCGG+GGG | 0.625314 | 7.4:-15666979 | None:intergenic |
| CCTCCCGAGGAAACTTACAC+TGG | 0.634056 | 7.4:+15666777 | MS.gene04608:CDS |
| CCAGTGTAAGTTTCCTCGGG+AGG | 0.637090 | 7.4:-15666777 | None:intergenic |
| GAGGCTGTGAAATGTGACCC+CGG | 0.637432 | 7.4:-15666992 | None:intergenic |
| GAGCTTGATCTGTCGCAGCA+GGG | 0.644837 | 7.4:+15667035 | MS.gene04608:CDS |
| AGAAAGCCTGGCAAAACGTG+AGG | 0.647012 | 7.4:-15666412 | None:intergenic |
| CCAAGGCCAACCGATTGTTG+TGG | 0.647809 | 7.4:-15666673 | None:intergenic |
| CTTCTGTCAAATCAAACATG+GGG | 0.651750 | 7.4:+15666828 | MS.gene04608:CDS |
| GCCACACCATGAGAAGATGT+AGG | 0.656605 | 7.4:-15666924 | None:intergenic |
| GTTCAAAGAAAGGAAGAGGT+GGG | 0.656815 | 7.4:+15663919 | MS.gene04608:CDS |
| GAGTTGCCTCCTGAATCCAT+TGG | 0.670435 | 7.4:-15663768 | None:intergenic |
| TTCAACATTCTCAACCACCT+CGG | 0.675950 | 7.4:+15663946 | MS.gene04608:CDS |
| TGGTGCCAGACATCCTCCCG+AGG | 0.679309 | 7.4:+15666764 | MS.gene04608:CDS |
| CCTTCAACTTGACACCGAGG+TGG | 0.683119 | 7.4:-15663960 | None:intergenic |
| GAGGTTAAGAGAGAGCTGGG+TGG | 0.689151 | 7.4:-15666393 | None:intergenic |
| TCAAGTTTCAAACAATTACG+AGG | 0.690642 | 7.4:+15666953 | MS.gene04608:CDS |
| CCAGAGAGTTGGCTACCGAG+AGG | 0.703528 | 7.4:-15667011 | None:intergenic |
| ACAGGTAACAGTGACAGAGG+TGG | 0.704297 | 7.4:+15666576 | MS.gene04608:intron |
| TCGACAGGTAACAGTGACAG+AGG | 0.705027 | 7.4:+15666573 | MS.gene04608:intron |
| CTCACACCAATGGATTCAGG+AGG | 0.709638 | 7.4:+15663762 | None:intergenic |
| CATCCTTCAACTTGACACCG+AGG | 0.727400 | 7.4:-15663963 | None:intergenic |
| GTTGTGGTCTGATTTCCGGG+TGG | 0.754915 | 7.4:-15666657 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTGATTCTTTTTTTTATT+TGG | + | chr7.4:15664568-15664587 | MS.gene04608:intron | 10.0% |
| !!! | TATATATAATTTGATTTATC+TGG | + | chr7.4:15664761-15664780 | MS.gene04608:intron | 10.0% |
| !! | AATGAAATTGAATTAAAGTA+TGG | + | chr7.4:15664963-15664982 | MS.gene04608:intron | 15.0% |
| !! | ATTAAACAATTTCAAATACT+TGG | + | chr7.4:15666542-15666561 | MS.gene04608:intron | 15.0% |
| !! | CTAATTAATAAGATAACTAA+TGG | + | chr7.4:15665211-15665230 | MS.gene04608:intron | 15.0% |
| !! | TAATGTGAATAATTTGAAAA+TGG | + | chr7.4:15665767-15665786 | MS.gene04608:intron | 15.0% |
| !! | TGAATAAATAAGAAAACTAA+AGG | + | chr7.4:15666034-15666053 | MS.gene04608:intron | 15.0% |
| !!! | TTTTCAAATTATTCACATTA+TGG | - | chr7.4:15665767-15665786 | None:intergenic | 15.0% |
| !! | ATAAAACTAAACCAAATACT+TGG | - | chr7.4:15665044-15665063 | None:intergenic | 20.0% |
| !! | ATATAATCTTAACTAAGAGT+TGG | - | chr7.4:15666193-15666212 | None:intergenic | 20.0% |
| !! | ATTGCTCTCAAAAAAAAAAA+AGG | - | chr7.4:15664246-15664265 | None:intergenic | 20.0% |
| !! | TGTCTATCTTAATTTATCAT+GGG | + | chr7.4:15666164-15666183 | MS.gene04608:intron | 20.0% |
| !! | TTAGATTCTTAAAACATCTT+CGG | - | chr7.4:15665858-15665877 | None:intergenic | 20.0% |
| !!! | AACTTTTTTTTATAACTCCA+TGG | - | chr7.4:15664791-15664810 | None:intergenic | 20.0% |
| !!! | ACACATATCATTTTCATAAA+GGG | - | chr7.4:15664843-15664862 | None:intergenic | 20.0% |
| !!! | ATAAAAAAAAGTTCTGGTTT+AGG | + | chr7.4:15664798-15664817 | MS.gene04608:intron | 20.0% |
| !!! | TATTTCTGATAAAATGTGTA+TGG | + | chr7.4:15664157-15664176 | MS.gene04608:intron | 20.0% |
| !!! | TATTTTATTCTGTTATTCTC+CGG | + | chr7.4:15664268-15664287 | MS.gene04608:intron | 20.0% |
| !!! | TTCATTTTGTGATTATTCAA+TGG | + | chr7.4:15665385-15665404 | MS.gene04608:intron | 20.0% |
| ! | AAAAGTTGAAGAAGAAAAAG+AGG | - | chr7.4:15664137-15664156 | None:intergenic | 25.0% |
| ! | AAAGTATGGACTTAGAAATT+AGG | + | chr7.4:15664977-15664996 | MS.gene04608:intron | 25.0% |
| ! | AAGAAGAAAAAGAGGAAATA+GGG | - | chr7.4:15664129-15664148 | None:intergenic | 25.0% |
| ! | AATAACATGCTGAATTTCAA+TGG | + | chr7.4:15666882-15666901 | MS.gene04608:CDS | 25.0% |
| ! | AATAGTACTAATTCTCACTA+AGG | - | chr7.4:15665325-15665344 | None:intergenic | 25.0% |
| ! | AATCTAATTATCAGCGTTTA+TGG | + | chr7.4:15665871-15665890 | MS.gene04608:intron | 25.0% |
| ! | ACCTATAATACAATAAAACC+CGG | - | chr7.4:15664290-15664309 | None:intergenic | 25.0% |
| ! | AGGTTCATTTAGATCAATAA+AGG | - | chr7.4:15665077-15665096 | None:intergenic | 25.0% |
| ! | ATAACATGCTGAATTTCAAT+GGG | + | chr7.4:15666883-15666902 | MS.gene04608:CDS | 25.0% |
| ! | CTGCCTAAAAAATAACATAA+GGG | - | chr7.4:15665990-15666009 | None:intergenic | 25.0% |
| ! | GGAGTTATAAAAAAAAGTTC+TGG | + | chr7.4:15664792-15664811 | MS.gene04608:intron | 25.0% |
| ! | GTATGATAAAACCAAGTATT+TGG | + | chr7.4:15665030-15665049 | MS.gene04608:intron | 25.0% |
| ! | GTGTCTATCTTAATTTATCA+TGG | + | chr7.4:15666163-15666182 | MS.gene04608:intron | 25.0% |
| ! | TATCTTCAAAATAGATTCGT+TGG | - | chr7.4:15663833-15663852 | None:intergenic | 25.0% |
| ! | TATTATAGGTGTAGTATTGT+AGG | + | chr7.4:15664300-15664319 | MS.gene04608:intron | 25.0% |
| ! | TATTGATCTAAATGAACCTA+GGG | + | chr7.4:15665078-15665097 | MS.gene04608:intron | 25.0% |
| ! | TCTCTTAATGGCTTAAAATT+TGG | + | chr7.4:15663807-15663826 | MS.gene04608:CDS | 25.0% |
| ! | TTAGTGAGAATTAGTACTAT+TGG | + | chr7.4:15665324-15665343 | MS.gene04608:intron | 25.0% |
| ! | TTATTGATCTAAATGAACCT+AGG | + | chr7.4:15665077-15665096 | MS.gene04608:intron | 25.0% |
| ! | TTCAACTTGTACTAAATTTC+TGG | + | chr7.4:15666516-15666535 | MS.gene04608:intron | 25.0% |
| !! | AAATTTTAAGCCATTAAGAG+AGG | - | chr7.4:15663808-15663827 | None:intergenic | 25.0% |
| !! | AACCAACATTCTTATGTTTT+AGG | + | chr7.4:15665961-15665980 | MS.gene04608:intron | 25.0% |
| !! | AAGAATCAAATTCTCTGAAA+AGG | - | chr7.4:15664559-15664578 | None:intergenic | 25.0% |
| !! | AATTTCTCAGACTAAGTTTT+GGG | - | chr7.4:15666629-15666648 | None:intergenic | 25.0% |
| !! | ACTTTCAGTTTTTGTTCAAT+TGG | + | chr7.4:15666487-15666506 | MS.gene04608:intron | 25.0% |
| !! | ATTTTATTCTGTTATTCTCC+GGG | + | chr7.4:15664269-15664288 | MS.gene04608:intron | 25.0% |
| !! | CACACATATCATTTTCATAA+AGG | - | chr7.4:15664844-15664863 | None:intergenic | 25.0% |
| !! | TGCTTTTGATAAGTTTGATT+TGG | + | chr7.4:15664454-15664473 | MS.gene04608:intron | 25.0% |
| !!! | GCTTTTGATAAGTTTGATTT+GGG | + | chr7.4:15664455-15664474 | MS.gene04608:intron | 25.0% |
| AAAACGACATAAACTACACT+TGG | - | chr7.4:15665655-15665674 | None:intergenic | 30.0% | |
| AAACTAAAGGAAAGATCAGT+AGG | + | chr7.4:15666047-15666066 | MS.gene04608:intron | 30.0% | |
| AGAAGAAAAAGAGGAAATAG+GGG | - | chr7.4:15664128-15664147 | None:intergenic | 30.0% | |
| CCTGCCTAAAAAATAACATA+AGG | - | chr7.4:15665991-15666010 | None:intergenic | 30.0% | |
| CTCTGATATGTAGTAAGTTA+AGG | + | chr7.4:15665728-15665747 | MS.gene04608:intron | 30.0% | |
| CTGATAAAATGTGTATGGTA+AGG | + | chr7.4:15664162-15664181 | MS.gene04608:intron | 30.0% | |
| CTTAACTTACTACATATCAG+AGG | - | chr7.4:15665730-15665749 | None:intergenic | 30.0% | |
| GAACAAAAACTGAAAGTAGA+GGG | - | chr7.4:15666484-15666503 | None:intergenic | 30.0% | |
| GAAGAAGAAAAAGAGGAAAT+AGG | - | chr7.4:15664130-15664149 | None:intergenic | 30.0% | |
| GAATCTCAAATTTCTTCGAT+AGG | + | chr7.4:15666138-15666157 | MS.gene04608:intron | 30.0% | |
| GGAAAAAAACAAAGTACAAC+CGG | - | chr7.4:15664492-15664511 | None:intergenic | 30.0% | |
| GTGTTAACAAGTCAGTTATA+TGG | - | chr7.4:15665303-15665322 | None:intergenic | 30.0% | |
| TCAAGTTTCAAACAATTACG+AGG | + | chr7.4:15666953-15666972 | MS.gene04608:CDS | 30.0% | |
| TCATACTATGTTATCCTGTT+TGG | + | chr7.4:15664336-15664355 | MS.gene04608:intron | 30.0% | |
| TCTTCTGTCAAATCAAACAT+GGG | + | chr7.4:15666827-15666846 | MS.gene04608:CDS | 30.0% | |
| TGAACAAAAACTGAAAGTAG+AGG | - | chr7.4:15666485-15666504 | None:intergenic | 30.0% | |
| TGCCTAAAACATAAGAATGT+TGG | - | chr7.4:15665966-15665985 | None:intergenic | 30.0% | |
| ! | AACATAAGAATGTTGGTTGT+TGG | - | chr7.4:15665959-15665978 | None:intergenic | 30.0% |
| ! | AAGTTTTTGACCACAAGATT+CGG | + | chr7.4:15665542-15665561 | MS.gene04608:intron | 30.0% |
| ! | ATTGTTTGAAACTTGATGCA+TGG | - | chr7.4:15666949-15666968 | None:intergenic | 30.0% |
| ! | GAATTTCTCAGACTAAGTTT+TGG | - | chr7.4:15666630-15666649 | None:intergenic | 30.0% |
| ! | TAGGATACAATTTTCAACCT+TGG | - | chr7.4:15665693-15665712 | None:intergenic | 30.0% |
| ! | TCGAAGAAATTTGAGATTCA+CGG | - | chr7.4:15666137-15666156 | None:intergenic | 30.0% |
| !! | AAAAAAGTTCTGGTTTAGGA+TGG | + | chr7.4:15664802-15664821 | MS.gene04608:intron | 30.0% |
| !! | AGAGGTGTACTATTTTACTT+AGG | - | chr7.4:15665712-15665731 | None:intergenic | 30.0% |
| !! | CAAACAAGCATGTATTTTAG+AGG | + | chr7.4:15665492-15665511 | MS.gene04608:intron | 30.0% |
| !!! | AAGCATTTTAAAGCTAAGAC+AGG | - | chr7.4:15664513-15664532 | None:intergenic | 30.0% |
| !!! | AGTGTAGTTTATGTCGTTTT+AGG | + | chr7.4:15665655-15665674 | MS.gene04608:intron | 30.0% |
| !!! | ATTTTGAGACTAGACTGATT+GGG | + | chr7.4:15666076-15666095 | MS.gene04608:intron | 30.0% |
| !!! | CAGCCCTTATGTTATTTTTT+AGG | + | chr7.4:15665984-15666003 | MS.gene04608:intron | 30.0% |
| !!! | CCTTATGTTATTTTTTAGGC+AGG | + | chr7.4:15665988-15666007 | MS.gene04608:intron | 30.0% |
| !!! | TATGTTATTTTTTAGGCAGG+CGG | + | chr7.4:15665991-15666010 | MS.gene04608:intron | 30.0% |
| !!! | TATTTTGAGACTAGACTGAT+TGG | + | chr7.4:15666075-15666094 | MS.gene04608:intron | 30.0% |
| !!! | TCCGGGTTTTATTGTATTAT+AGG | + | chr7.4:15664286-15664305 | MS.gene04608:intron | 30.0% |
| AAAAACAGATGAAGAAAGCC+TGG | - | chr7.4:15666427-15666446 | None:intergenic | 35.0% | |
| AAAGGAAGTTCTTGAGCTAA+TGG | + | chr7.4:15664920-15664939 | MS.gene04608:intron | 35.0% | |
| AAATGAACCTAGGGTTCTTA+AGG | + | chr7.4:15665087-15665106 | MS.gene04608:intron | 35.0% | |
| AAGGAAGTTCTTGAGCTAAT+GGG | + | chr7.4:15664921-15664940 | MS.gene04608:intron | 35.0% | |
| ACGACTACGACTATCATAAT+TGG | + | chr7.4:15665518-15665537 | MS.gene04608:intron | 35.0% | |
| ACTATGTTATCCTGTTTGGT+CGG | + | chr7.4:15664340-15664359 | MS.gene04608:intron | 35.0% | |
| AGAGGAAATAGGGGTTAAAA+AGG | - | chr7.4:15664119-15664138 | None:intergenic | 35.0% | |
| AGCTAATGGGGAAATGAAAA+AGG | + | chr7.4:15664934-15664953 | MS.gene04608:intron | 35.0% | |
| ATATGGATGTAGAACATTCC+AGG | + | chr7.4:15667069-15667088 | MS.gene04608:CDS | 35.0% | |
| ATCAAGGAAAAAGAAGTTGC+CGG | + | chr7.4:15666331-15666350 | MS.gene04608:CDS | 35.0% | |
| ATGTGTATGGTAAGGACATT+AGG | + | chr7.4:15664170-15664189 | MS.gene04608:intron | 35.0% | |
| ATGTTATTCAATCCAGGACT+TGG | - | chr7.4:15666870-15666889 | None:intergenic | 35.0% | |
| ATTAGTACTATTGGTGTAGC+TGG | + | chr7.4:15665333-15665352 | MS.gene04608:intron | 35.0% | |
| ATTCTTGAGCAATGGTAACA+TGG | - | chr7.4:15666241-15666260 | None:intergenic | 35.0% | |
| CAAAATGAAAGCAAAAGACC+TGG | - | chr7.4:15665374-15665393 | None:intergenic | 35.0% | |
| CGTTCTGTTTAGTGTATATG+TGG | + | chr7.4:15665579-15665598 | MS.gene04608:intron | 35.0% | |
| CTCTTCTGTCAAATCAAACA+TGG | + | chr7.4:15666826-15666845 | MS.gene04608:CDS | 35.0% | |
| CTTCTGTCAAATCAAACATG+GGG | + | chr7.4:15666828-15666847 | MS.gene04608:CDS | 35.0% | |
| GAGGAAATAGGGGTTAAAAA+GGG | - | chr7.4:15664118-15664137 | None:intergenic | 35.0% | |
| TAGACTCCTACATACCTAAA+CGG | - | chr7.4:15664730-15664749 | None:intergenic | 35.0% | |
| TAGGCTGCAGTTATGTTATT+AGG | + | chr7.4:15665926-15665945 | MS.gene04608:intron | 35.0% | |
| TATAATTGAACCGACCAAAC+AGG | - | chr7.4:15664353-15664372 | None:intergenic | 35.0% | |
| TATGGATGTAGAACATTCCA+GGG | + | chr7.4:15667070-15667089 | MS.gene04608:CDS | 35.0% | |
| TCTTGTACTTCAGTTGTGTT+AGG | + | chr7.4:15664605-15664624 | MS.gene04608:intron | 35.0% | |
| TGACCATTGAGAAGATTCAT+AGG | - | chr7.4:15667096-15667115 | None:intergenic | 35.0% | |
| TGTGTATGGTAAGGACATTA+GGG | + | chr7.4:15664171-15664190 | MS.gene04608:intron | 35.0% | |
| TTCAGCATGTTATTCAATCC+AGG | - | chr7.4:15666876-15666895 | None:intergenic | 35.0% | |
| ! | AGGCTTTCTTCATCTGTTTT+TGG | + | chr7.4:15666426-15666445 | MS.gene04608:CDS | 35.0% |
| ! | GTACTTACCTTTTCTTGACT+CGG | + | chr7.4:15665438-15665457 | MS.gene04608:intron | 35.0% |
| ! | GTGTGAGATTTTGTTCCTTT+TGG | + | chr7.4:15664861-15664880 | MS.gene04608:intron | 35.0% |
| !! | ACAAGCATGTATTTTAGAGG+TGG | + | chr7.4:15665495-15665514 | MS.gene04608:intron | 35.0% |
| !! | TCTTCTTCTGGTTCAAAGAA+AGG | + | chr7.4:15663909-15663928 | MS.gene04608:CDS | 35.0% |
| !!! | ATACTTTGGTGTTTTGAGTC+TGG | + | chr7.4:15664701-15664720 | MS.gene04608:intron | 35.0% |
| !!! | TTTATGTCGTTTTAGGCGTA+TGG | + | chr7.4:15665662-15665681 | MS.gene04608:intron | 35.0% |
| AAGCTCACAGATTCTTGGAA+AGG | + | chr7.4:15666106-15666125 | MS.gene04608:intron | 40.0% | |
| AGAAGAAGAACTAGCAGCAA+TGG | - | chr7.4:15663892-15663911 | None:intergenic | 40.0% | |
| AGACCAGAAACAGTAACAGT+AGG | - | chr7.4:15664059-15664078 | None:intergenic | 40.0% | |
| AGACTCCTACATACCTAAAC+GGG | - | chr7.4:15664729-15664748 | None:intergenic | 40.0% | |
| AGATGTAGGAAGTTGTGTCA+TGG | - | chr7.4:15666913-15666932 | None:intergenic | 40.0% | |
| AGGAAGTTCTTGAGCTAATG+GGG | + | chr7.4:15664922-15664941 | MS.gene04608:intron | 40.0% | |
| ATATGGTACGCACACTAACA+TGG | - | chr7.4:15665286-15665305 | None:intergenic | 40.0% | |
| ATTGTTGTGGTCTGATTTCC+GGG | - | chr7.4:15666663-15666682 | None:intergenic | 40.0% | |
| CAACTTCCTACATCTTCTCA+TGG | + | chr7.4:15666918-15666937 | MS.gene04608:CDS | 40.0% | |
| CAGTGACGCATTGTATATTC+TGG | - | chr7.4:15664676-15664695 | None:intergenic | 40.0% | |
| GAAAGCAAAAGACCTGGATT+GGG | - | chr7.4:15665368-15665387 | None:intergenic | 40.0% | |
| GAACACTAAAGAGGACCAAA+AGG | - | chr7.4:15664879-15664898 | None:intergenic | 40.0% | |
| GACCAGAAACAGTAACAGTA+GGG | - | chr7.4:15664058-15664077 | None:intergenic | 40.0% | |
| GACGAACAATTCTTGAGCAA+TGG | - | chr7.4:15666249-15666268 | None:intergenic | 40.0% | |
| GATTGTTGTGGTCTGATTTC+CGG | - | chr7.4:15666664-15666683 | None:intergenic | 40.0% | |
| GGAAATCAGACCACAACAAT+CGG | + | chr7.4:15666663-15666682 | MS.gene04608:CDS | 40.0% | |
| GGTATGTAGGAGTCTAGAAA+AGG | + | chr7.4:15664734-15664753 | MS.gene04608:intron | 40.0% | |
| GTATCATGTGGCACTTGTAA+AGG | + | chr7.4:15664902-15664921 | MS.gene04608:intron | 40.0% | |
| GTTCAAAGAAAGGAAGAGGT+GGG | + | chr7.4:15663919-15663938 | MS.gene04608:CDS | 40.0% | |
| TATCCTACCGAGTCAAGAAA+AGG | - | chr7.4:15665448-15665467 | None:intergenic | 40.0% | |
| TATGGTACGCACACTAACAT+GGG | - | chr7.4:15665285-15665304 | None:intergenic | 40.0% | |
| TCAGCAAGCTGATGAAATCT+GGG | - | chr7.4:15666306-15666325 | None:intergenic | 40.0% | |
| TGAAAGCAAAAGACCTGGAT+TGG | - | chr7.4:15665369-15665388 | None:intergenic | 40.0% | |
| TGATACCAGGAACACTAAAG+AGG | - | chr7.4:15664888-15664907 | None:intergenic | 40.0% | |
| TGCAAGAAAAGGTTGTCAGA+TGG | - | chr7.4:15666717-15666736 | None:intergenic | 40.0% | |
| TGCTAATGAGAGTTTGAGAG+TGG | + | chr7.4:15665139-15665158 | MS.gene04608:intron | 40.0% | |
| TTAGTGTTCCTGGTATCATG+TGG | + | chr7.4:15664890-15664909 | MS.gene04608:intron | 40.0% | |
| TTCAACATTCTCAACCACCT+CGG | + | chr7.4:15663946-15663965 | MS.gene04608:CDS | 40.0% | |
| TTGATTTATCTGGTCTGCCA+TGG | + | chr7.4:15664771-15664790 | MS.gene04608:intron | 40.0% | |
| TTTCCAAGAATCTGTGAGCT+TGG | - | chr7.4:15666107-15666126 | None:intergenic | 40.0% | |
| ! | CAACCTTTTCTTGCAAGGTT+CGG | + | chr7.4:15666722-15666741 | MS.gene04608:CDS | 40.0% |
| ! | GCTAGTTCTTCTTCTTCTTC+TGG | + | chr7.4:15663897-15663916 | MS.gene04608:CDS | 40.0% |
| ! | TACTTGGCACTTTTATCGAC+AGG | + | chr7.4:15666558-15666577 | MS.gene04608:intron | 40.0% |
| ! | TCTGACAACCTTTTCTTGCA+AGG | + | chr7.4:15666717-15666736 | MS.gene04608:CDS | 40.0% |
| ! | TCTGGTTCAAAGAAAGGAAG+AGG | + | chr7.4:15663915-15663934 | MS.gene04608:CDS | 40.0% |
| !! | CTGTTTCTGGTCTACAACAA+AGG | + | chr7.4:15664066-15664085 | MS.gene04608:CDS | 40.0% |
| !! | GATTTGGGTTGATTGTGTTC+CGG | + | chr7.4:15664470-15664489 | MS.gene04608:intron | 40.0% |
| !! | GGTTTTGTCAACAATGTAGC+AGG | + | chr7.4:15664087-15664106 | MS.gene04608:CDS | 40.0% |
| !!! | TTACCTTTTCTTGACTCGGT+AGG | + | chr7.4:15665442-15665461 | MS.gene04608:intron | 40.0% |
| AAGCTGATGAAATCTGGGCA+AGG | - | chr7.4:15666301-15666320 | None:intergenic | 45.0% | |
| ACCACAAGATTCGGAGAACA+TGG | + | chr7.4:15665551-15665570 | MS.gene04608:intron | 45.0% | |
| ACCATGTTCTCCGAATCTTG+TGG | - | chr7.4:15665555-15665574 | None:intergenic | 45.0% | |
| ACTACACTTGGAACAAGCAC+CGG | - | chr7.4:15665643-15665662 | None:intergenic | 45.0% | |
| ACTCCAGTGTAAGTTTCCTC+GGG | - | chr7.4:15666783-15666802 | None:intergenic | 45.0% | |
| AGAAATTCACTTCCACCACC+CGG | + | chr7.4:15666642-15666661 | MS.gene04608:CDS | 45.0% | |
| AGAAGAACTAGCAGCAATGG+TGG | - | chr7.4:15663889-15663908 | None:intergenic | 45.0% | |
| AGACCAAGCTCACAGATTCT+TGG | + | chr7.4:15666101-15666120 | MS.gene04608:intron | 45.0% | |
| ATCAGACCACAACAATCGGT+TGG | + | chr7.4:15666667-15666686 | MS.gene04608:CDS | 45.0% | |
| ATGAAATCTGGGCAAGGTTG+TGG | - | chr7.4:15666295-15666314 | None:intergenic | 45.0% | |
| ATGCAGACCTTAAGAACCCT+AGG | - | chr7.4:15665097-15665116 | None:intergenic | 45.0% | |
| CTACCGAACCTTGCAAGAAA+AGG | - | chr7.4:15666728-15666747 | None:intergenic | 45.0% | |
| CTCAGCAAGCTGATGAAATC+TGG | - | chr7.4:15666307-15666326 | None:intergenic | 45.0% | |
| CTCGGTAGGATAGTGTTCAA+TGG | + | chr7.4:15665456-15665475 | MS.gene04608:intron | 45.0% | |
| GACTCCAGTGTAAGTTTCCT+CGG | - | chr7.4:15666784-15666803 | None:intergenic | 45.0% | |
| GACTCCTACATACCTAAACG+GGG | - | chr7.4:15664728-15664747 | None:intergenic | 45.0% | |
| GCGTCACTGAGCATATACTT+TGG | + | chr7.4:15664687-15664706 | MS.gene04608:intron | 45.0% | |
| GCTCAAGAATTGTTCGTCTC+TGG | + | chr7.4:15666251-15666270 | MS.gene04608:intron | 45.0% | |
| GGGCCTATGAATCTTCTCAA+TGG | + | chr7.4:15667090-15667109 | MS.gene04608:CDS | 45.0% | |
| GGTTCAAAGAAAGGAAGAGG+TGG | + | chr7.4:15663918-15663937 | MS.gene04608:CDS | 45.0% | |
| GTGTAGCTGCAATAGCTTTC+CGG | + | chr7.4:15665621-15665640 | MS.gene04608:intron | 45.0% | |
| TACAAGTGCCACATGATACC+AGG | - | chr7.4:15664901-15664920 | None:intergenic | 45.0% | |
| TCATGCTATCGTGTGGTCAT+TGG | + | chr7.4:15665167-15665186 | MS.gene04608:intron | 45.0% | |
| TCCTACATCTTCTCATGGTG+TGG | + | chr7.4:15666923-15666942 | MS.gene04608:CDS | 45.0% | |
| TCGGAAGAGTCCTCTCTTAA+TGG | + | chr7.4:15663795-15663814 | MS.gene04608:CDS | 45.0% | |
| TGCCCTACTGTTACTGTTTC+TGG | + | chr7.4:15664053-15664072 | MS.gene04608:CDS | 45.0% | |
| TTCAGGAGGCAACTCTTCTT+CGG | + | chr7.4:15663776-15663795 | MS.gene04608:CDS | 45.0% | |
| TTGAGAAGATTCATAGGCCC+TGG | - | chr7.4:15667090-15667109 | None:intergenic | 45.0% | |
| TTGGTCCTCTTTAGTGTTCC+TGG | + | chr7.4:15664880-15664899 | MS.gene04608:intron | 45.0% | |
| ! | TCTTAACCTCACGTTTTGCC+AGG | + | chr7.4:15666406-15666425 | MS.gene04608:CDS | 45.0% |
| !! | CAGCTTGCTGAGTTTGATCA+AGG | + | chr7.4:15666315-15666334 | MS.gene04608:CDS | 45.0% |
| !! | CTTTTCTTGCAAGGTTCGGT+AGG | + | chr7.4:15666726-15666745 | MS.gene04608:CDS | 45.0% |
| !! | TATTATATTATATTAATGTT+AGG | + | chr7.4:15665907-15665926 | MS.gene04608:intron | 5.0% |
| ACAGGTAACAGTGACAGAGG+TGG | + | chr7.4:15666576-15666595 | MS.gene04608:intron | 50.0% | |
| ACGTGAGGTTAAGAGAGAGC+TGG | - | chr7.4:15666400-15666419 | None:intergenic | 50.0% | |
| AGAAAGCCTGGCAAAACGTG+AGG | - | chr7.4:15666415-15666434 | None:intergenic | 50.0% | |
| AGGTTAAGAGAGAGCTGGGT+GGG | - | chr7.4:15666395-15666414 | None:intergenic | 50.0% | |
| CATCCTTCAACTTGACACCG+AGG | - | chr7.4:15663966-15663985 | None:intergenic | 50.0% | |
| CGTGAGGTTAAGAGAGAGCT+GGG | - | chr7.4:15666399-15666418 | None:intergenic | 50.0% | |
| GCCACACCATGAGAAGATGT+AGG | - | chr7.4:15666927-15666946 | None:intergenic | 50.0% | |
| GGTCACATTTCACAGCCTCT+CGG | + | chr7.4:15666996-15667015 | MS.gene04608:CDS | 50.0% | |
| GTACGCACACTAACATGGGT+TGG | - | chr7.4:15665281-15665300 | None:intergenic | 50.0% | |
| TATGACCAGCTAGTCGTCTC+CGG | - | chr7.4:15666353-15666372 | None:intergenic | 50.0% | |
| TCGACAGGTAACAGTGACAG+AGG | + | chr7.4:15666573-15666592 | MS.gene04608:intron | 50.0% | |
| TGGATAGTGCAACCCAATCC+AGG | + | chr7.4:15665353-15665372 | MS.gene04608:intron | 50.0% | |
| TGGTCCCCGTTTAGGTATGT+AGG | + | chr7.4:15664721-15664740 | MS.gene04608:intron | 50.0% | |
| TTAGGCGTATGGCTCATCCA+AGG | + | chr7.4:15665673-15665692 | MS.gene04608:intron | 50.0% | |
| TTTGAGTCTGGTCCCCGTTT+AGG | + | chr7.4:15664713-15664732 | MS.gene04608:intron | 50.0% | |
| ! | TCTTGCAAGGTTCGGTAGGT+GGG | + | chr7.4:15666730-15666749 | MS.gene04608:CDS | 50.0% |
| ! | TTCTTGCAAGGTTCGGTAGG+TGG | + | chr7.4:15666729-15666748 | MS.gene04608:CDS | 50.0% |
| !! | GCAGGGAAGGAGGCATTATA+TGG | + | chr7.4:15667052-15667071 | MS.gene04608:CDS | 50.0% |
| AATGTGACCCCGGCCAAGAT+CGG | - | chr7.4:15666985-15667004 | None:intergenic | 55.0% | |
| AGTTTCCTCGGGAGGATGTC+TGG | - | chr7.4:15666772-15666791 | None:intergenic | 55.0% | |
| CAGAGGTGGCAGCTTCTTGA+TGG | + | chr7.4:15666590-15666609 | MS.gene04608:CDS | 55.0% | |
| CCAAGGCCAACCGATTGTTG+TGG | - | chr7.4:15666676-15666695 | None:intergenic | 55.0% | |
| CCAGTGTAAGTTTCCTCGGG+AGG | - | chr7.4:15666780-15666799 | None:intergenic | 55.0% | |
| CCTCCCGAGGAAACTTACAC+TGG | + | chr7.4:15666777-15666796 | MS.gene04608:CDS | 55.0% | |
| CCTTCAACTTGACACCGAGG+TGG | - | chr7.4:15663963-15663982 | None:intergenic | 55.0% | |
| CGAAACGCAGAACCAAGTCC+TGG | + | chr7.4:15666855-15666874 | MS.gene04608:CDS | 55.0% | |
| GAGCTTGATCTGTCGCAGCA+GGG | + | chr7.4:15667035-15667054 | MS.gene04608:CDS | 55.0% | |
| GAGGCTGTGAAATGTGACCC+CGG | - | chr7.4:15666995-15667014 | None:intergenic | 55.0% | |
| GAGGTTAAGAGAGAGCTGGG+TGG | - | chr7.4:15666396-15666415 | None:intergenic | 55.0% | |
| GATCAAGCTCGCCAGAGAGT+TGG | - | chr7.4:15667025-15667044 | None:intergenic | 55.0% | |
| GGCTGCATCATGCTATCGTG+TGG | + | chr7.4:15665160-15665179 | MS.gene04608:intron | 55.0% | |
| GGTTAAGAGAGAGCTGGGTG+GGG | - | chr7.4:15666394-15666413 | None:intergenic | 55.0% | |
| GTTAAGAGAGAGCTGGGTGG+GGG | - | chr7.4:15666393-15666412 | None:intergenic | 55.0% | |
| GTTGTGGTCTGATTTCCGGG+TGG | - | chr7.4:15666660-15666679 | None:intergenic | 55.0% | |
| TACGAGGTTTCCCCCGATCT+TGG | + | chr7.4:15666969-15666988 | MS.gene04608:CDS | 55.0% | |
| TTGATCTGTCGCAGCAGGGA+AGG | + | chr7.4:15667039-15667058 | MS.gene04608:CDS | 55.0% | |
| !! | AACAATCGGTTGGCCTTGGC+CGG | + | chr7.4:15666677-15666696 | MS.gene04608:CDS | 55.0% |
| !! | CCACAACAATCGGTTGGCCT+TGG | + | chr7.4:15666673-15666692 | MS.gene04608:CDS | 55.0% |
| !! | CCACCTCGGTGTCAAGTTGA+AGG | + | chr7.4:15663960-15663979 | MS.gene04608:CDS | 55.0% |
| AGGTTTCCCCCGATCTTGGC+CGG | + | chr7.4:15666973-15666992 | MS.gene04608:CDS | 60.0% | |
| AGTTGCCGGAGACGACTAGC+TGG | + | chr7.4:15666345-15666364 | MS.gene04608:CDS | 60.0% | |
| ATCTGTCGCAGCAGGGAAGG+AGG | + | chr7.4:15667042-15667061 | MS.gene04608:CDS | 60.0% | |
| ATGTGACCCCGGCCAAGATC+GGG | - | chr7.4:15666984-15667003 | None:intergenic | 60.0% | |
| CCAGAGAGTTGGCTACCGAG+AGG | - | chr7.4:15667014-15667033 | None:intergenic | 60.0% | |
| CCTCTCGGTAGCCAACTCTC+TGG | + | chr7.4:15667011-15667030 | MS.gene04608:CDS | 60.0% | |
| CGAGCTTGATCTGTCGCAGC+AGG | + | chr7.4:15667034-15667053 | MS.gene04608:CDS | 60.0% | |
| GTAGGTGGGACAAGCTTCCC+TGG | + | chr7.4:15666744-15666763 | MS.gene04608:CDS | 60.0% | |
| GTGGTCTGATTTCCGGGTGG+TGG | - | chr7.4:15666657-15666676 | None:intergenic | 60.0% | |
| !! | ACAATCGGTTGGCCTTGGCC+GGG | + | chr7.4:15666678-15666697 | MS.gene04608:CDS | 60.0% |
| CGGGAGGATGTCTGGCACCA+GGG | - | chr7.4:15666764-15666783 | None:intergenic | 65.0% | |
| GATGGCGACTCCGTGTTCCC+CGG | - | chr7.4:15666699-15666718 | None:intergenic | 65.0% | |
| GGTTTCCCCCGATCTTGGCC+GGG | + | chr7.4:15666974-15666993 | MS.gene04608:CDS | 65.0% | |
| GTTTCCCCCGATCTTGGCCG+GGG | + | chr7.4:15666975-15666994 | MS.gene04608:CDS | 65.0% | |
| TCGGGAGGATGTCTGGCACC+AGG | - | chr7.4:15666765-15666784 | None:intergenic | 65.0% | |
| TGTGACCCCGGCCAAGATCG+GGG | - | chr7.4:15666983-15667002 | None:intergenic | 65.0% | |
| ! | TGGTGCCAGACATCCTCCCG+AGG | + | chr7.4:15666764-15666783 | MS.gene04608:CDS | 65.0% |
| !! | CAATCGGTTGGCCTTGGCCG+GGG | + | chr7.4:15666679-15666698 | MS.gene04608:CDS | 65.0% |
| !! | TTGGCCTTGGCCGGGGAACA+CGG | + | chr7.4:15666686-15666705 | MS.gene04608:CDS | 65.0% |
| GACTCCGTGTTCCCCGGCCA+AGG | - | chr7.4:15666693-15666712 | None:intergenic | 70.0% | |
| GTGACCCCGGCCAAGATCGG+GGG | - | chr7.4:15666982-15667001 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 15663771 | 15667121 | 15663771 | ID=MS.gene04608 |
| chr7.4 | mRNA | 15663771 | 15667121 | 15663771 | ID=MS.gene04608.t1;Parent=MS.gene04608 |
| chr7.4 | exon | 15663771 | 15664108 | 15663771 | ID=MS.gene04608.t1.exon1;Parent=MS.gene04608.t1 |
| chr7.4 | CDS | 15663771 | 15664108 | 15663771 | ID=cds.MS.gene04608.t1;Parent=MS.gene04608.t1 |
| chr7.4 | exon | 15666308 | 15666447 | 15666308 | ID=MS.gene04608.t1.exon2;Parent=MS.gene04608.t1 |
| chr7.4 | CDS | 15666308 | 15666447 | 15666308 | ID=cds.MS.gene04608.t1;Parent=MS.gene04608.t1 |
| chr7.4 | exon | 15666580 | 15667121 | 15666580 | ID=MS.gene04608.t1.exon3;Parent=MS.gene04608.t1 |
| chr7.4 | CDS | 15666580 | 15667121 | 15666580 | ID=cds.MS.gene04608.t1;Parent=MS.gene04608.t1 |
| Gene Sequence |
| Protein sequence |
