AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene018772

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene018772.t1 MTR_1g053715 89.583 336 26 2 17 345 17 350 0.0 594
MS.gene018772.t1 MTR_7g092930 49.704 338 119 12 23 342 17 321 1.13e-79 247
MS.gene018772.t1 MTR_3g085180 35.145 276 147 8 8 269 111 368 2.30e-31 122
MS.gene018772.t1 MTR_7g444860 44.366 142 50 3 20 147 101 227 1.88e-26 107
MS.gene018772.t1 MTR_8g005960 42.857 154 62 4 2 144 124 262 3.69e-26 106
MS.gene018772.t1 MTR_5g046670 51.923 104 42 2 76 172 244 346 8.04e-26 108
MS.gene018772.t1 MTR_4g109770 58.333 96 31 2 58 144 103 198 2.38e-25 106
MS.gene018772.t1 MTR_8g463140 60.759 79 24 1 76 147 65 143 3.63e-25 100
MS.gene018772.t1 MTR_3g099080 41.481 135 72 1 18 145 40 174 4.30e-25 104
MS.gene018772.t1 MTR_2g461920 63.158 76 21 1 76 144 171 246 1.42e-24 104
MS.gene018772.t1 MTR_4g088555 63.514 74 20 1 76 142 63 136 2.43e-24 97.1
MS.gene018772.t1 MTR_2g014200 62.162 74 21 1 76 142 64 137 3.22e-23 94.0
MS.gene018772.t1 MTR_8g096780 34.722 216 95 7 76 251 99 308 3.82e-23 99.4
MS.gene018772.t1 MTR_2g078770 60.811 74 22 1 76 142 58 131 3.94e-23 94.7
MS.gene018772.t1 MTR_8g080690 31.022 274 138 6 25 269 105 356 1.36e-22 97.8
MS.gene018772.t1 MTR_2g046550 58.228 79 26 1 76 147 139 217 1.95e-22 99.0
MS.gene018772.t1 MTR_8g080670 42.857 133 49 3 16 141 122 234 2.44e-22 97.4
MS.gene018772.t1 MTR_7g028740 53.012 83 32 1 76 151 77 159 6.60e-22 95.5
MS.gene018772.t1 MTR_1g035010 54.545 88 33 1 76 156 104 191 2.73e-21 95.5
MS.gene018772.t1 MTR_7g110320 59.459 74 23 1 76 142 145 218 4.06e-21 95.1
MS.gene018772.t1 MTR_7g110320 59.459 74 23 1 76 142 145 218 6.16e-21 94.7
MS.gene018772.t1 MTR_1g086250 60.811 74 22 1 76 142 147 220 9.35e-21 94.0
MS.gene018772.t1 MTR_8g080680 32.645 242 86 9 73 269 129 338 1.35e-20 92.4
MS.gene018772.t1 MTR_2g020620 32.653 98 59 1 52 142 66 163 7.70e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene018772.t1 AT3G57920 41.727 278 97 12 23 278 27 261 3.77e-44 155
MS.gene018772.t1 AT2G42200 43.902 246 100 10 23 252 32 255 5.13e-41 147
MS.gene018772.t1 AT5G43270 38.756 209 76 8 22 218 119 287 2.50e-27 111
MS.gene018772.t1 AT5G43270 38.756 209 76 8 22 218 119 287 2.50e-27 111
MS.gene018772.t1 AT5G43270 38.756 209 76 8 22 218 119 287 2.50e-27 111
MS.gene018772.t1 AT2G33810 63.514 74 20 1 76 142 54 127 5.44e-26 101
MS.gene018772.t1 AT3G15270 57.317 82 28 1 74 148 61 142 3.17e-25 100
MS.gene018772.t1 AT1G69170 64.000 75 20 1 76 143 124 198 4.36e-24 102
MS.gene018772.t1 AT5G50670 44.444 144 65 4 15 145 36 177 5.14e-24 101
MS.gene018772.t1 AT5G50670 44.444 144 65 4 15 145 36 177 5.14e-24 101
MS.gene018772.t1 AT5G50570 44.444 144 65 4 15 145 36 177 5.14e-24 101
MS.gene018772.t1 AT5G50570 44.444 144 65 4 15 145 36 177 5.14e-24 101
MS.gene018772.t1 AT1G02065 44.186 129 49 3 22 142 148 261 1.82e-23 99.4
MS.gene018772.t1 AT1G53160 58.025 81 27 1 74 147 52 132 2.07e-23 95.5
MS.gene018772.t1 AT2G47070 62.338 77 22 1 76 145 106 182 2.25e-23 101
MS.gene018772.t1 AT1G27370 57.143 77 26 1 75 144 175 251 2.74e-23 99.4
MS.gene018772.t1 AT1G53160 60.526 76 23 1 74 142 52 127 2.95e-23 95.1
MS.gene018772.t1 AT1G53160 60.526 76 23 1 74 142 52 127 2.95e-23 95.1
MS.gene018772.t1 AT1G27370 57.143 77 26 1 75 144 175 251 4.79e-23 99.4
MS.gene018772.t1 AT1G27370 57.143 77 26 1 75 144 175 251 4.79e-23 99.4
MS.gene018772.t1 AT1G27370 57.143 77 26 1 75 144 175 251 4.79e-23 99.4
MS.gene018772.t1 AT1G27370 57.143 77 26 1 75 144 175 251 4.79e-23 99.4
MS.gene018772.t1 AT1G27370 57.143 77 26 1 75 144 175 251 4.79e-23 99.4
MS.gene018772.t1 AT1G27370 57.143 77 26 1 75 144 175 251 4.79e-23 99.4
MS.gene018772.t1 AT1G27360 58.442 77 25 1 75 144 174 250 6.41e-23 99.0
MS.gene018772.t1 AT1G27360 58.442 77 25 1 75 144 174 250 6.41e-23 99.0
MS.gene018772.t1 AT1G27360 58.442 77 25 1 75 144 174 250 6.41e-23 99.0
MS.gene018772.t1 AT1G27360 58.442 77 25 1 75 144 174 250 6.41e-23 99.0
MS.gene018772.t1 AT3G60030 53.261 92 33 2 67 148 115 206 1.28e-22 99.8
MS.gene018772.t1 AT1G20980 42.143 140 72 3 69 200 114 252 2.22e-22 99.0
MS.gene018772.t1 AT1G76580 56.471 85 29 2 71 148 110 193 5.76e-22 97.4
MS.gene018772.t1 AT1G76580 56.471 85 29 2 71 148 110 193 6.04e-22 97.8
MS.gene018772.t1 AT1G76580 56.471 85 29 2 71 148 110 193 6.35e-22 97.4
MS.gene018772.t1 AT5G18830 47.619 84 36 2 68 143 130 213 7.74e-16 79.3
MS.gene018772.t1 AT5G18830 47.619 84 36 2 68 143 130 213 7.84e-16 79.3
MS.gene018772.t1 AT5G18830 47.619 84 36 2 68 143 130 213 7.85e-16 79.3
MS.gene018772.t1 AT2G47070 62.264 53 13 1 100 145 1 53 2.36e-12 68.6
MS.gene018772.t1 AT1G02065 38.776 98 44 2 22 118 148 230 1.52e-11 64.3

Find 77 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCCTTCTGTTGTTGTTTC+TGG 0.016193 1.3:+37663952 MS.gene018772:CDS
TTCAAACAAATGCTTCTTCT+TGG 0.212145 1.3:+37667508 MS.gene018772:CDS
TCATTGTAGTTATCCATTAT+TGG 0.242355 1.3:-37667333 None:intergenic
GCTTTCTCCGCCTTTCATTA+TGG 0.263953 1.3:-37666782 None:intergenic
ATTTGTTTGAAGATGATAAT+TGG 0.265913 1.3:-37667496 None:intergenic
TCTTCATCATCTTCATCTTC+AGG 0.271781 1.3:+37663814 MS.gene018772:CDS
CATTTCCCATAGAAAACTTT+TGG 0.292972 1.3:-37667173 None:intergenic
TTCTGTTGTTGTTTCTGGTT+TGG 0.298755 1.3:+37663957 MS.gene018772:CDS
GAAAGTAGGTGAGGAGAGTT+TGG 0.319002 1.3:-37666838 None:intergenic
CCCGAGGCTGTTCCTGCTCT+TGG 0.325755 1.3:+37667567 MS.gene018772:CDS
TCATCTACCGAGTTTCTTGA+TGG 0.335549 1.3:+37663685 MS.gene018772:CDS
CCACCAACACCAACAGCATT+AGG 0.337043 1.3:-37663781 None:intergenic
TTTCTTGATGGATTAAAGTT+TGG 0.342712 1.3:+37663697 MS.gene018772:CDS
TACTAGACATCCTCCAATAA+TGG 0.345407 1.3:+37667320 MS.gene018772:CDS
CTGGCACCACCAATGAGTTC+AGG 0.351780 1.3:+37663631 None:intergenic
CCAAGAGCAGGAACAGCCTC+GGG 0.384160 1.3:-37667567 None:intergenic
CCTAATGCTGTTGGTGTTGG+TGG 0.385726 1.3:+37663781 MS.gene018772:CDS
AACAACTTGTTGAATTTCAA+TGG 0.386985 1.3:+37667441 MS.gene018772:CDS
AGATCAGCCGAGCCAGTTCC+TGG 0.394151 1.3:+37667210 MS.gene018772:CDS
CATGGAAGTTTGTTCCTTGT+AGG 0.402971 1.3:-37667290 None:intergenic
CACAAGGCAAGAACCATTAC+TGG 0.410261 1.3:+37667646 MS.gene018772:CDS
GCTGTTCCTGCTCTTGGTCT+CGG 0.413748 1.3:+37667573 MS.gene018772:CDS
TTGTTTCTGGTTTGGAGCAA+AGG 0.417760 1.3:+37663965 MS.gene018772:CDS
AATTGTGTTGTTTGATTACC+AGG 0.420845 1.3:-37667228 None:intergenic
TGTTTCTAGAGTACCATGTT+TGG 0.425256 1.3:-37667395 None:intergenic
AAACTCTCCTCACCTACTTT+CGG 0.426870 1.3:+37666840 MS.gene018772:CDS
AGAAACTCGGTAGATGAGTT+AGG 0.444243 1.3:-37663679 None:intergenic
GTTGTTTGATTACCAGGAAC+TGG 0.451194 1.3:-37667222 None:intergenic
AGTTGCCGCAGGCGTTTAGC+TGG 0.453018 1.3:+37666759 MS.gene018772:CDS
ACCAAGAGCAGGAACAGCCT+CGG 0.457849 1.3:-37667568 None:intergenic
GATGAGTTAGGTTGTGAAGA+GGG 0.463824 1.3:-37663667 None:intergenic
TTTGTTTGAAGATGATAATT+GGG 0.467753 1.3:-37667495 None:intergenic
GGAACTGGCTCGGCTGATCT+CGG 0.479236 1.3:-37667207 None:intergenic
ATTATTGGAGGATGTCTAGT+AGG 0.503531 1.3:-37667318 None:intergenic
AGCTAATAATGACTTTCTGA+TGG 0.505146 1.3:+37667137 MS.gene018772:CDS
CAGCTTCCTGAATTCGATCA+AGG 0.515316 1.3:+37666729 MS.gene018772:CDS
GGTACAAAACCTGAACTCAT+TGG 0.518582 1.3:-37663640 None:intergenic
CAAATCAAACCTAATGCTGT+TGG 0.533702 1.3:+37663772 MS.gene018772:CDS
AGCAAACAAGAGTATTAAAG+TGG 0.540068 1.3:-37667669 None:intergenic
CTCTTCTGTCAAACCAAACA+TGG 0.546120 1.3:+37667382 MS.gene018772:CDS
AGTAGATCTGAGTGGTGCTA+AGG 0.546255 1.3:+37663888 MS.gene018772:CDS
AAAGTAGGTGAGGAGAGTTT+GGG 0.546461 1.3:-37666837 None:intergenic
AGTATTAAAGTGGCCAGTAA+TGG 0.550747 1.3:-37667659 None:intergenic
GTTTAGCTGGCCATAATGAA+AGG 0.554237 1.3:+37666772 MS.gene018772:CDS
TTCATCTTCAGGAATGAAGA+GGG 0.561883 1.3:+37663825 MS.gene018772:CDS
AGATGAGTTAGGTTGTGAAG+AGG 0.562239 1.3:-37663668 None:intergenic
AATAGTTTCTAACCGAAAGT+AGG 0.562750 1.3:-37666852 None:intergenic
AAACCAGAAACAACAACAGA+AGG 0.564585 1.3:-37663955 None:intergenic
TGGTCTCGGTCAAAATTCGC+AGG 0.564733 1.3:+37667587 MS.gene018772:CDS
ATCAAACAACACAATTTACC+TGG 0.566011 1.3:+37667235 MS.gene018772:CDS
TTGATTACCAGGAACTGGCT+CGG 0.574349 1.3:-37667217 None:intergenic
TTAGGTTGTGAAGAGGGAGA+AGG 0.574494 1.3:-37663661 None:intergenic
CTACAAGGAACAAACTTCCA+TGG 0.576359 1.3:+37667291 MS.gene018772:CDS
CTTTAATCCATCAAGAAACT+CGG 0.578305 1.3:-37663692 None:intergenic
GCTATTCATAGCGATCTTCG+TGG 0.587187 1.3:+37667609 MS.gene018772:CDS
AAGGAAAACGAAGTTGCCGC+AGG 0.588964 1.3:+37666748 MS.gene018772:CDS
TTGTAGTTATCCATTATTGG+AGG 0.589950 1.3:-37667330 None:intergenic
AAACCTAATGCTGTTGGTGT+TGG 0.593485 1.3:+37663778 MS.gene018772:CDS
CTTCATCTTCAGGAATGAAG+AGG 0.601953 1.3:+37663824 MS.gene018772:CDS
TTTGTGTCAACAGGTAACAA+TGG 0.606651 1.3:+37667111 MS.gene018772:intron
AAACAACTCATCGACACCAT+CGG 0.609352 1.3:+37667260 MS.gene018772:CDS
ATTGGAGGATGTCTAGTAGG+AGG 0.622162 1.3:-37667315 None:intergenic
AAGTTGTTCATCTCAACACT+TGG 0.626493 1.3:-37667426 None:intergenic
GGTGAGGTCAACGTGTCACA+AGG 0.630256 1.3:+37667630 MS.gene018772:CDS
CAAGAGCAGGAACAGCCTCG+GGG 0.634386 1.3:-37667566 None:intergenic
CCTTGTAGGATAAAATCCGA+TGG 0.645398 1.3:-37667276 None:intergenic
TCATAGCGATCTTCGTGGTG+AGG 0.646398 1.3:+37667614 MS.gene018772:CDS
AAGAGCAGGAACAGCCTCGG+GGG 0.653642 1.3:-37667565 None:intergenic
GGAGAGTTTGGGAAAACGCG+AGG 0.654140 1.3:-37666826 None:intergenic
TTTCTAACCGAAAGTAGGTG+AGG 0.656699 1.3:-37666847 None:intergenic
TATGGCCAGCTAAACGCCTG+CGG 0.658585 1.3:-37666764 None:intergenic
GATGTCTAGTAGGAGGACCA+TGG 0.664660 1.3:-37667308 None:intergenic
TCATCTTCAGGAATGAAGAG+GGG 0.688645 1.3:+37663826 MS.gene018772:CDS
GCTTCAACTTGACACCTACG+TGG 0.700305 1.3:-37663859 None:intergenic
TAGCTGGCCATAATGAAAGG+CGG 0.703070 1.3:+37666775 MS.gene018772:CDS
GGGGAAATAATCATCCACGT+AGG 0.738243 1.3:+37663845 MS.gene018772:CDS
GCTTGTAAAGTAGATCTGAG+TGG 0.795108 1.3:+37663880 MS.gene018772:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTAATATTAAATTATAT+GGG + chr1.3:37666150-37666169 MS.gene018772:intron 0.0%
!!! TATTTTAATATTAAATTATA+TGG + chr1.3:37666149-37666168 MS.gene018772:intron 0.0%
!!! ATTTTGTATTTCAATTTAAA+AGG + chr1.3:37664764-37664783 MS.gene018772:intron 10.0%
!!! TTTGTAATTTGTTTAAATAA+AGG - chr1.3:37665667-37665686 None:intergenic 10.0%
!!! TTTTAATATATATTGTTTGT+TGG + chr1.3:37664205-37664224 MS.gene018772:intron 10.0%
!! AAAGAAAAAAACACTAAAAA+AGG - chr1.3:37664088-37664107 None:intergenic 15.0%
!! AATTATAAACAAAAGTAGAA+TGG - chr1.3:37664042-37664061 None:intergenic 15.0%
!! AATTCTCAAATAAAAAGTTA+GGG - chr1.3:37666979-37666998 None:intergenic 15.0%
!! ACAACAAAAGAAAAAAAAAA+CGG - chr1.3:37665073-37665092 None:intergenic 15.0%
!! ATTTCATTTGAATTTGATAA+TGG + chr1.3:37664292-37664311 MS.gene018772:intron 15.0%
!!! ATAATTTGTAAATGTATGTT+TGG + chr1.3:37664801-37664820 MS.gene018772:intron 15.0%
!!! ATGTTTCAAATAAATGTTTT+GGG + chr1.3:37665130-37665149 MS.gene018772:intron 15.0%
!!! TGTTTTTTTCTTTCTATAAT+GGG + chr1.3:37664095-37664114 MS.gene018772:intron 15.0%
!!! TTTAAAATGTATGATGTTTT+AGG + chr1.3:37665034-37665053 MS.gene018772:intron 15.0%
!! ATCCTAGTAAAAATAAATGT+AGG - chr1.3:37664396-37664415 None:intergenic 20.0%
!! ATTTGTGATTACTTAGAAAA+AGG + chr1.3:37664895-37664914 MS.gene018772:intron 20.0%
!! ATTTGTTTGAAGATGATAAT+TGG - chr1.3:37667499-37667518 None:intergenic 20.0%
!! CAATTCTCAAATAAAAAGTT+AGG - chr1.3:37666980-37666999 None:intergenic 20.0%
!! TAAAAAAGACAAAATGAGTT+AGG - chr1.3:37664156-37664175 None:intergenic 20.0%
!! TAAATTACATCTTAGGTTTA+GGG + chr1.3:37665341-37665360 MS.gene018772:intron 20.0%
!! TATTTCAATTTAAAAGGCTT+TGG + chr1.3:37664770-37664789 MS.gene018772:intron 20.0%
!! TCATTTAAAAGATTTGTGTA+AGG - chr1.3:37666074-37666093 None:intergenic 20.0%
!! TCATTTATAGTAAAGAAATG+TGG + chr1.3:37666331-37666350 MS.gene018772:intron 20.0%
!! TCCAAATTTCAAAGAAAAAA+TGG + chr1.3:37664468-37664487 MS.gene018772:intron 20.0%
!! TCTCCATAGATATAAAAATT+TGG - chr1.3:37666502-37666521 None:intergenic 20.0%
!! TTGATGAAACTATTTATCAT+AGG - chr1.3:37667046-37667065 None:intergenic 20.0%
!! TTTGTTTGAAGATGATAATT+GGG - chr1.3:37667498-37667517 None:intergenic 20.0%
!!! AATTTTTATATCTATGGAGA+AGG + chr1.3:37666502-37666521 MS.gene018772:intron 20.0%
!!! ACCATTTTTTCTTTGAAATT+TGG - chr1.3:37664472-37664491 None:intergenic 20.0%
!!! ATTACAATACCAGATATTTT+AGG + chr1.3:37664998-37665017 MS.gene018772:intron 20.0%
!!! CATGTTTCAAATAAATGTTT+TGG + chr1.3:37665129-37665148 MS.gene018772:intron 20.0%
!!! GTGTTTTTTTCTTTCTATAA+TGG + chr1.3:37664094-37664113 MS.gene018772:intron 20.0%
!!! TACATTTATTTTTACTAGGA+TGG + chr1.3:37664395-37664414 MS.gene018772:intron 20.0%
!!! TCATAAAATTCTGAAATTTC+AGG - chr1.3:37664436-37664455 None:intergenic 20.0%
! AAGAAATGTGGAAATAATCT+TGG + chr1.3:37666343-37666362 MS.gene018772:intron 25.0%
! ACAAAAGAAAAAAAAAACGG+AGG - chr1.3:37665070-37665089 None:intergenic 25.0%
! ATAGATTTCTTAGATGTTGT+TGG + chr1.3:37664258-37664277 MS.gene018772:intron 25.0%
! ATTAAGAAATTGAAATGCAG+GGG - chr1.3:37666417-37666436 None:intergenic 25.0%
! CAAAAGAAAAAAAAAACGGA+GGG - chr1.3:37665069-37665088 None:intergenic 25.0%
! CATTAAGAAATTGAAATGCA+GGG - chr1.3:37666418-37666437 None:intergenic 25.0%
! CTTCGATCAAACAAATAAAA+AGG - chr1.3:37666920-37666939 None:intergenic 25.0%
! GTAAATTACATCTTAGGTTT+AGG + chr1.3:37665340-37665359 MS.gene018772:intron 25.0%
! TCATTAAGAAATTGAAATGC+AGG - chr1.3:37666419-37666438 None:intergenic 25.0%
! TCATTGTAGTTATCCATTAT+TGG - chr1.3:37667336-37667355 None:intergenic 25.0%
! TCCAATAATAGAAGAACATT+AGG - chr1.3:37664333-37664352 None:intergenic 25.0%
! TCCTAATGTTCTTCTATTAT+TGG + chr1.3:37664329-37664348 MS.gene018772:intron 25.0%
! TTTGAAAAGGCAAATGTATT+TGG + chr1.3:37664968-37664987 MS.gene018772:intron 25.0%
!! AAGTGTAAGATGTTGTTTAT+TGG + chr1.3:37664869-37664888 MS.gene018772:intron 25.0%
!! GAGCCAAATTTTTATATCTA+TGG + chr1.3:37666496-37666515 MS.gene018772:intron 25.0%
!! TAATAAATAACTTGCCATGT+GGG - chr1.3:37664544-37664563 None:intergenic 25.0%
!! TCATACCAAAAGTTTTCTAT+GGG + chr1.3:37667168-37667187 MS.gene018772:CDS 25.0%
!! TTAATAAATAACTTGCCATG+TGG - chr1.3:37664545-37664564 None:intergenic 25.0%
!! TTCATACCAAAAGTTTTCTA+TGG + chr1.3:37667167-37667186 MS.gene018772:CDS 25.0%
!! TTTTGTATATTAAACCTTCG+AGG + chr1.3:37665256-37665275 MS.gene018772:intron 25.0%
!! TTTTTAAACTCAAACTGACT+TGG - chr1.3:37666560-37666579 None:intergenic 25.0%
!!! AACAACTTGTTGAATTTCAA+TGG + chr1.3:37667441-37667460 MS.gene018772:CDS 25.0%
!!! AGAAAGTGTAGATTTTGAAA+AGG + chr1.3:37664955-37664974 MS.gene018772:intron 25.0%
!!! CAACATCTTACACTTTTTTT+TGG - chr1.3:37664864-37664883 None:intergenic 25.0%
!!! TCTTTGAAATTTGGAAAGAA+TGG - chr1.3:37664463-37664482 None:intergenic 25.0%
!!! TGCCTACATTTATTTTTACT+AGG + chr1.3:37664391-37664410 MS.gene018772:intron 25.0%
!!! TTTCTTGATGGATTAAAGTT+TGG + chr1.3:37663697-37663716 MS.gene018772:CDS 25.0%
!!! TTTTCTTTCTATAATGGGTA+TGG + chr1.3:37664100-37664119 MS.gene018772:intron 25.0%
AAACTTGAAATCCTTCATTG+TGG - chr1.3:37665959-37665978 None:intergenic 30.0%
AATAGTTTCTAACCGAAAGT+AGG - chr1.3:37666855-37666874 None:intergenic 30.0%
AATGAGAGGATTACTAGTTA+AGG + chr1.3:37667018-37667037 MS.gene018772:intron 30.0%
AGCTAATAATGACTTTCTGA+TGG + chr1.3:37667137-37667156 MS.gene018772:CDS 30.0%
AGTAAGAGAGTGAAGTTTAT+TGG + chr1.3:37665214-37665233 MS.gene018772:intron 30.0%
AGTTGAAGTCCTAAAATATC+TGG - chr1.3:37665010-37665029 None:intergenic 30.0%
ATCAAACAACACAATTTACC+TGG + chr1.3:37667235-37667254 MS.gene018772:CDS 30.0%
ATGAGAGGATTACTAGTTAA+GGG + chr1.3:37667019-37667038 MS.gene018772:intron 30.0%
ATTATGGATATGTCTACAAC+GGG + chr1.3:37666224-37666243 MS.gene018772:intron 30.0%
CATTATGGATATGTCTACAA+CGG + chr1.3:37666223-37666242 MS.gene018772:intron 30.0%
CTAAACAAATGACCCTTAAA+AGG - chr1.3:37666888-37666907 None:intergenic 30.0%
CTTATGAAAAAGTTAGACGT+AGG - chr1.3:37666447-37666466 None:intergenic 30.0%
CTTTAATCCATCAAGAAACT+CGG - chr1.3:37663695-37663714 None:intergenic 30.0%
GAGAATTGAGATAGAGAATT+AGG + chr1.3:37666992-37667011 MS.gene018772:intron 30.0%
GATGTAATTTACACATCCTT+TGG - chr1.3:37665332-37665351 None:intergenic 30.0%
GGATGTGTAAATTACATCTT+AGG + chr1.3:37665334-37665353 MS.gene018772:intron 30.0%
GTTAATTTCTATGTGTGGAT+TGG - chr1.3:37666395-37666414 None:intergenic 30.0%
TAGCTTATCTCTATAAGCAT+TGG - chr1.3:37666264-37666283 None:intergenic 30.0%
TATTCATTCACCATTATACC+TGG + chr1.3:37664588-37664607 MS.gene018772:intron 30.0%
TCTTAATGAAGGATAAGCAT+GGG + chr1.3:37664679-37664698 MS.gene018772:intron 30.0%
TGGTCAAAAAATCTACTTTG+AGG + chr1.3:37663717-37663736 MS.gene018772:CDS 30.0%
TTCAAACAAATGCTTCTTCT+TGG + chr1.3:37667508-37667527 MS.gene018772:CDS 30.0%
TTGTAGTTATCCATTATTGG+AGG - chr1.3:37667333-37667352 None:intergenic 30.0%
! ATTCCTTCTGTTACCTTTTA+AGG + chr1.3:37666872-37666891 MS.gene018772:intron 30.0%
! CATTTCCCATAGAAAACTTT+TGG - chr1.3:37667176-37667195 None:intergenic 30.0%
! GAAGATTTGCTTAATGTTGT+TGG + chr1.3:37665917-37665936 MS.gene018772:intron 30.0%
! TTCCTTCTGTTACCTTTTAA+GGG + chr1.3:37666873-37666892 MS.gene018772:intron 30.0%
! TTTAAAAGGCTTTGGTTGAT+TGG + chr1.3:37664778-37664797 MS.gene018772:intron 30.0%
!! AATTGTGTTGTTTGATTACC+AGG - chr1.3:37667231-37667250 None:intergenic 30.0%
!! GCTTCTTCTTGGTTTTTAAA+GGG + chr1.3:37667519-37667538 MS.gene018772:CDS 30.0%
!! TGCTTCTTCTTGGTTTTTAA+AGG + chr1.3:37667518-37667537 MS.gene018772:CDS 30.0%
!!! CAATGAAGGATTTCAAGTTT+TGG + chr1.3:37665959-37665978 MS.gene018772:intron 30.0%
!!! CTTTTTCATAAGCATCGATA+AGG + chr1.3:37666455-37666474 MS.gene018772:intron 30.0%
!!! TCAAGTTTTGGTGCTTAAAT+GGG + chr1.3:37665971-37665990 MS.gene018772:intron 30.0%
!!! TGTTTTGTTTTTGTGTCAAC+AGG + chr1.3:37667102-37667121 MS.gene018772:intron 30.0%
!!! TTCAAGTTTTGGTGCTTAAA+TGG + chr1.3:37665970-37665989 MS.gene018772:intron 30.0%
AAACCAGAAACAACAACAGA+AGG - chr1.3:37663958-37663977 None:intergenic 35.0%
AAGTTGTTCATCTCAACACT+TGG - chr1.3:37667429-37667448 None:intergenic 35.0%
ACATCACTTGTGTGACATTA+TGG + chr1.3:37665594-37665613 MS.gene018772:intron 35.0%
AGAGAATTAGGCTAAATGAG+AGG + chr1.3:37667004-37667023 MS.gene018772:intron 35.0%
AGATTGACATCAACTTCTCA+AGG - chr1.3:37664498-37664517 None:intergenic 35.0%
AGGTTAAAAATGAGCTTGGT+TGG - chr1.3:37666809-37666828 None:intergenic 35.0%
ATATTAAACCTTCGAGGCAT+AGG + chr1.3:37665262-37665281 MS.gene018772:intron 35.0%
ATCCATAATGGTACCTATTG+AGG - chr1.3:37666213-37666232 None:intergenic 35.0%
ATGAGTTAGGCAAAACAAGA+AGG - chr1.3:37664143-37664162 None:intergenic 35.0%
ATTATTGGAGGATGTCTAGT+AGG - chr1.3:37667321-37667340 None:intergenic 35.0%
ATTGACATCAACTTCTCAAG+GGG - chr1.3:37664496-37664515 None:intergenic 35.0%
CAAATCAAACCTAATGCTGT+TGG + chr1.3:37663772-37663791 MS.gene018772:CDS 35.0%
CATGAGAAAAACTACAAGAG+GGG - chr1.3:37665841-37665860 None:intergenic 35.0%
CGTTGTAGACATATCCATAA+TGG - chr1.3:37666225-37666244 None:intergenic 35.0%
GATTGACATCAACTTCTCAA+GGG - chr1.3:37664497-37664516 None:intergenic 35.0%
GCATGAGAAAAACTACAAGA+GGG - chr1.3:37665842-37665861 None:intergenic 35.0%
GGTTAAAAATGAGCTTGGTT+GGG - chr1.3:37666808-37666827 None:intergenic 35.0%
GTAATTTACACATCCTTTGG+TGG - chr1.3:37665329-37665348 None:intergenic 35.0%
GTAGAAAAAATGATCCCACA+TGG + chr1.3:37664527-37664546 MS.gene018772:intron 35.0%
GTCTTAATGAAGGATAAGCA+TGG + chr1.3:37664678-37664697 MS.gene018772:intron 35.0%
GTTAAAAATGAGCTTGGTTG+GGG - chr1.3:37666807-37666826 None:intergenic 35.0%
GTTCTTCTATTATTGGAGAC+TGG + chr1.3:37664336-37664355 MS.gene018772:intron 35.0%
TACTAGACATCCTCCAATAA+TGG + chr1.3:37667320-37667339 MS.gene018772:CDS 35.0%
TCACATGGCTAAAGCTAAAA+GGG - chr1.3:37664618-37664637 None:intergenic 35.0%
TCTTCATCATCTTCATCTTC+AGG + chr1.3:37663814-37663833 MS.gene018772:CDS 35.0%
TGCATGAGAAAAACTACAAG+AGG - chr1.3:37665843-37665862 None:intergenic 35.0%
TTATGGATATGTCTACAACG+GGG + chr1.3:37666225-37666244 MS.gene018772:intron 35.0%
TTCATCTTCAGGAATGAAGA+GGG + chr1.3:37663825-37663844 MS.gene018772:CDS 35.0%
TTGAGATAAAAACGATCCCA+CGG - chr1.3:37666667-37666686 None:intergenic 35.0%
TTTGTGTCAACAGGTAACAA+TGG + chr1.3:37667111-37667130 MS.gene018772:intron 35.0%
! GAGAAGGTCTTATGAATTAG+AGG + chr1.3:37666518-37666537 MS.gene018772:intron 35.0%
!! CATCTTAGGTTTAGGGTTTT+TGG + chr1.3:37665348-37665367 MS.gene018772:intron 35.0%
!! TATAAGCATTGGTACCTCAT+AGG - chr1.3:37666253-37666272 None:intergenic 35.0%
!! TGTTTCTAGAGTACCATGTT+TGG - chr1.3:37667398-37667417 None:intergenic 35.0%
!! TTCTGTTGTTGTTTCTGGTT+TGG + chr1.3:37663957-37663976 MS.gene018772:CDS 35.0%
!! TTTCTATAATGGGTATGGTC+TGG + chr1.3:37664105-37664124 MS.gene018772:intron 35.0%
!!! ATAAGCATCGATAAGGCTTT+TGG + chr1.3:37666462-37666481 MS.gene018772:intron 35.0%
AAAAGAAGTGGGTAGTGAGA+GGG + chr1.3:37664652-37664671 MS.gene018772:intron 40.0%
AAACAACTCATCGACACCAT+CGG + chr1.3:37667260-37667279 MS.gene018772:CDS 40.0%
AAACCTAATGCTGTTGGTGT+TGG + chr1.3:37663778-37663797 MS.gene018772:CDS 40.0%
AAACTCTCCTCACCTACTTT+CGG + chr1.3:37666840-37666859 MS.gene018772:CDS 40.0%
AAAGGGTCTTCCAGGTATAA+TGG - chr1.3:37664601-37664620 None:intergenic 40.0%
AAAGTAGGTGAGGAGAGTTT+GGG - chr1.3:37666840-37666859 None:intergenic 40.0%
AGAAACTCGGTAGATGAGTT+AGG - chr1.3:37663682-37663701 None:intergenic 40.0%
AGAGATAAGCTAACCCCATT+GGG + chr1.3:37666272-37666291 MS.gene018772:intron 40.0%
CAAACCTAACTCTCCAAAGA+GGG - chr1.3:37665454-37665473 None:intergenic 40.0%
CAGGGGTTAATTTCTATGTG+TGG - chr1.3:37666400-37666419 None:intergenic 40.0%
CCTTGTAGGATAAAATCCGA+TGG - chr1.3:37667279-37667298 None:intergenic 40.0%
CGAAAACAACAGACAAACCT+TGG - chr1.3:37665779-37665798 None:intergenic 40.0%
CTACAAGGAACAAACTTCCA+TGG + chr1.3:37667291-37667310 MS.gene018772:CDS 40.0%
CTCCTCAATAGGTACCATTA+TGG + chr1.3:37666208-37666227 MS.gene018772:intron 40.0%
CTCTTCTGTCAAACCAAACA+TGG + chr1.3:37667382-37667401 MS.gene018772:CDS 40.0%
CTCTTTGATAGAACTTGCAC+AGG + chr1.3:37666700-37666719 MS.gene018772:intron 40.0%
CTGTGCAAGTTCTATCAAAG+AGG - chr1.3:37666702-37666721 None:intergenic 40.0%
CTTCATCTTCAGGAATGAAG+AGG + chr1.3:37663824-37663843 MS.gene018772:CDS 40.0%
GACCCTTAAAAGGTAACAGA+AGG - chr1.3:37666878-37666897 None:intergenic 40.0%
GCTTGTAAAGTAGATCTGAG+TGG + chr1.3:37663880-37663899 MS.gene018772:CDS 40.0%
GTCACATGGCTAAAGCTAAA+AGG - chr1.3:37664619-37664638 None:intergenic 40.0%
GTCCTACTGGTAAAAGAAGT+GGG + chr1.3:37664641-37664660 MS.gene018772:intron 40.0%
GTTGTTTGATTACCAGGAAC+TGG - chr1.3:37667225-37667244 None:intergenic 40.0%
GTTTAGCTGGCCATAATGAA+AGG + chr1.3:37666772-37666791 MS.gene018772:CDS 40.0%
TAAAAGAAGTGGGTAGTGAG+AGG + chr1.3:37664651-37664670 MS.gene018772:intron 40.0%
TAAAGCTAAAAGGGTCTTCC+AGG - chr1.3:37664609-37664628 None:intergenic 40.0%
TAATGGTACCTATTGAGGAG+AGG - chr1.3:37666208-37666227 None:intergenic 40.0%
TAGAGATAAGCTAACCCCAT+TGG + chr1.3:37666271-37666290 MS.gene018772:intron 40.0%
TATGAGATCCTCTCCTCAAT+AGG + chr1.3:37666197-37666216 MS.gene018772:intron 40.0%
TCATCTACCGAGTTTCTTGA+TGG + chr1.3:37663685-37663704 MS.gene018772:CDS 40.0%
TCATCTTCAGGAATGAAGAG+GGG + chr1.3:37663826-37663845 MS.gene018772:CDS 40.0%
TGACACTACAATGTCAACCA+AGG + chr1.3:37665759-37665778 MS.gene018772:intron 40.0%
TGTCCTACTGGTAAAAGAAG+TGG + chr1.3:37664640-37664659 MS.gene018772:intron 40.0%
TTGACATCAACTTCTCAAGG+GGG - chr1.3:37664495-37664514 None:intergenic 40.0%
TTTCTAACCGAAAGTAGGTG+AGG - chr1.3:37666850-37666869 None:intergenic 40.0%
! AGATGAGTTAGGTTGTGAAG+AGG - chr1.3:37663671-37663690 None:intergenic 40.0%
! CATGGAAGTTTGTTCCTTGT+AGG - chr1.3:37667293-37667312 None:intergenic 40.0%
! CCATCGGATTTTATCCTACA+AGG + chr1.3:37667276-37667295 MS.gene018772:CDS 40.0%
! CCTGTTGTTGCAAGCATTTT+GGG + chr1.3:37665536-37665555 MS.gene018772:intron 40.0%
! CGTTTTCCTTGATCGAATTC+AGG - chr1.3:37666738-37666757 None:intergenic 40.0%
! CTCTTTGGAGAGTTAGGTTT+GGG + chr1.3:37665453-37665472 MS.gene018772:intron 40.0%
! CTGTTGTTGCAAGCATTTTG+GGG + chr1.3:37665537-37665556 MS.gene018772:intron 40.0%
! GATGAGTTAGGTTGTGAAGA+GGG - chr1.3:37663670-37663689 None:intergenic 40.0%
! TACCCACTTCTTTTACCAGT+AGG - chr1.3:37664646-37664665 None:intergenic 40.0%
! TATTCCCTCTTTGGAGAGTT+AGG + chr1.3:37665447-37665466 MS.gene018772:intron 40.0%
! TGTTGTTGCAAGCATTTTGG+GGG + chr1.3:37665538-37665557 MS.gene018772:intron 40.0%
!! GAGAGGGTTAGTCTTAATGA+AGG + chr1.3:37664668-37664687 MS.gene018772:intron 40.0%
!! TCTCCTTCTGTTGTTGTTTC+TGG + chr1.3:37663952-37663971 MS.gene018772:CDS 40.0%
!! TTGTTTCTGGTTTGGAGCAA+AGG + chr1.3:37663965-37663984 MS.gene018772:CDS 40.0%
!!! AGTTCTCTCTCTGGCTTTTT+AGG + chr1.3:37665418-37665437 MS.gene018772:intron 40.0%
!!! GGTTTGTCTGTTGTTTTCGT+TGG + chr1.3:37665780-37665799 MS.gene018772:intron 40.0%
!!! GTTCTCTCTCTGGCTTTTTA+GGG + chr1.3:37665419-37665438 MS.gene018772:intron 40.0%
!!! TTAGGGTTTTTGGTTGCTCT+GGG + chr1.3:37665358-37665377 MS.gene018772:intron 40.0%
!!! TTTAGGGTTTTTGGTTGCTC+TGG + chr1.3:37665357-37665376 MS.gene018772:intron 40.0%
ACCACACTGTTACATAACCG+TGG + chr1.3:37666647-37666666 MS.gene018772:intron 45.0%
ATGGGACCAACAAAGAGAGA+GGG + chr1.3:37666168-37666187 MS.gene018772:intron 45.0%
ATTGGAGGATGTCTAGTAGG+AGG - chr1.3:37667318-37667337 None:intergenic 45.0%
CAATGCATGAACACCACCAA+AGG + chr1.3:37665313-37665332 MS.gene018772:intron 45.0%
CACAAGGCAAGAACCATTAC+TGG + chr1.3:37667646-37667665 MS.gene018772:CDS 45.0%
CAGCTTCCTGAATTCGATCA+AGG + chr1.3:37666729-37666748 MS.gene018772:CDS 45.0%
CCAAACCTAACTCTCCAAAG+AGG - chr1.3:37665455-37665474 None:intergenic 45.0%
CCACACTGTTACATAACCGT+GGG + chr1.3:37666648-37666667 MS.gene018772:intron 45.0%
CCCAAAATGCTTGCAACAAC+AGG - chr1.3:37665539-37665558 None:intergenic 45.0%
CGCGAGGTTAAAAATGAGCT+TGG - chr1.3:37666813-37666832 None:intergenic 45.0%
GAAAACCAGATGTCACGTTG+TGG + chr1.3:37665715-37665734 MS.gene018772:intron 45.0%
GAAAGTAGGTGAGGAGAGTT+TGG - chr1.3:37666841-37666860 None:intergenic 45.0%
GAGATAAGCTAACCCCATTG+GGG + chr1.3:37666273-37666292 MS.gene018772:intron 45.0%
GCTATTCATAGCGATCTTCG+TGG + chr1.3:37667609-37667628 MS.gene018772:CDS 45.0%
GCTTTCTCCGCCTTTCATTA+TGG - chr1.3:37666785-37666804 None:intergenic 45.0%
GGGGAAATAATCATCCACGT+AGG + chr1.3:37663845-37663864 MS.gene018772:CDS 45.0%
GTCACGTGACACACTATGAT+TGG - chr1.3:37665642-37665661 None:intergenic 45.0%
GTGCTTAAATGGGTCATACG+CGG + chr1.3:37665981-37666000 MS.gene018772:intron 45.0%
GTGTCAATGTCATGTCGCAT+TGG - chr1.3:37665745-37665764 None:intergenic 45.0%
TAAGCACCCTCTCTCTTTGT+TGG - chr1.3:37666177-37666196 None:intergenic 45.0%
TACCAGTAGGACATGTCACA+TGG - chr1.3:37664633-37664652 None:intergenic 45.0%
TAGCTGGCCATAATGAAAGG+CGG + chr1.3:37666775-37666794 MS.gene018772:CDS 45.0%
TATGGGACCAACAAAGAGAG+AGG + chr1.3:37666167-37666186 MS.gene018772:intron 45.0%
TCCTTCATTGTGGATGCTCT+TGG - chr1.3:37665949-37665968 None:intergenic 45.0%
TTGATTACCAGGAACTGGCT+CGG - chr1.3:37667220-37667239 None:intergenic 45.0%
! AGTAGATCTGAGTGGTGCTA+AGG + chr1.3:37663888-37663907 MS.gene018772:CDS 45.0%
! CCTCTTTGGAGAGTTAGGTT+TGG + chr1.3:37665452-37665471 MS.gene018772:intron 45.0%
! GCCTGTTGTTGCAAGCATTT+TGG + chr1.3:37665535-37665554 MS.gene018772:intron 45.0%
! GTTAGGTTTGGGTTCTTTGC+TGG + chr1.3:37665464-37665483 MS.gene018772:intron 45.0%
! GTTGTTGCAAGCATTTTGGG+GGG + chr1.3:37665539-37665558 MS.gene018772:intron 45.0%
! TTAGGTTGTGAAGAGGGAGA+AGG - chr1.3:37663664-37663683 None:intergenic 45.0%
!! AACTCAAACTGACTTGGCTC+TGG - chr1.3:37666554-37666573 None:intergenic 45.0%
!! ACCAAGAGCATCCACAATGA+AGG + chr1.3:37665945-37665964 MS.gene018772:intron 45.0%
!! AGCATTTTGGGGGGTTTCTT+TGG + chr1.3:37665548-37665567 MS.gene018772:intron 45.0%
!! GACTTGGCTCTGGTTCAAAT+TGG - chr1.3:37666544-37666563 None:intergenic 45.0%
!! GCATTTTGGGGGGTTTCTTT+GGG + chr1.3:37665549-37665568 MS.gene018772:intron 45.0%
!! TGTCGATGAGTTGTTTTGCC+AGG - chr1.3:37667256-37667275 None:intergenic 45.0%
!!! TCTCTCTGGCTTTTTAGGGT+GGG + chr1.3:37665423-37665442 MS.gene018772:intron 45.0%
!! AAATATCTTTAAATTTAAAT+TGG - chr1.3:37664838-37664857 None:intergenic 5.0%
AAGGAAAACGAAGTTGCCGC+AGG + chr1.3:37666748-37666767 MS.gene018772:CDS 50.0%
AGAGAACTCCACCAGGAGAA+CGG - chr1.3:37665406-37665425 None:intergenic 50.0%
AGCCATGTGACATGTCCTAC+TGG + chr1.3:37664628-37664647 MS.gene018772:intron 50.0%
AGCTCTTAGACCATCCCCAA+TGG - chr1.3:37666290-37666309 None:intergenic 50.0%
CAGCAAAACCTATGCCTCGA+AGG - chr1.3:37665273-37665292 None:intergenic 50.0%
CATGCAATACCAAGCAGGGA+AGG - chr1.3:37665818-37665837 None:intergenic 50.0%
CATGTGACCTGCTACACTGT+TGG - chr1.3:37663996-37664015 None:intergenic 50.0%
CCACCAACACCAACAGCATT+AGG - chr1.3:37663784-37663803 None:intergenic 50.0%
CCCACGGTTATGTAACAGTG+TGG - chr1.3:37666651-37666670 None:intergenic 50.0%
CTCTTAGACCATCCCCAATG+GGG - chr1.3:37666288-37666307 None:intergenic 50.0%
GATGTCTAGTAGGAGGACCA+TGG - chr1.3:37667311-37667330 None:intergenic 50.0%
GCTCTTAGACCATCCCCAAT+GGG - chr1.3:37666289-37666308 None:intergenic 50.0%
GCTTCAACTTGACACCTACG+TGG - chr1.3:37663862-37663881 None:intergenic 50.0%
GTCAACCACAACGTGACATC+TGG - chr1.3:37665723-37665742 None:intergenic 50.0%
TAAGCAAACACGACCCCCAA+AGG - chr1.3:37665490-37665509 None:intergenic 50.0%
TAAGCTAACCCCATTGGGGA+TGG + chr1.3:37666277-37666296 MS.gene018772:intron 50.0%
TCATAGCGATCTTCGTGGTG+AGG + chr1.3:37667614-37667633 MS.gene018772:CDS 50.0%
TGGTCTCGGTCAAAATTCGC+AGG + chr1.3:37667587-37667606 MS.gene018772:CDS 50.0%
TTTGGGGGTCGTGTTTGCTT+AGG + chr1.3:37665489-37665508 MS.gene018772:intron 50.0%
! CTTCGAGGCATAGGTTTTGC+TGG + chr1.3:37665271-37665290 MS.gene018772:intron 50.0%
! GGTTTTGCCAACAGTGTAGC+AGG + chr1.3:37663986-37664005 MS.gene018772:intron 50.0%
! TCTACAACGGGGTACCTATG+AGG + chr1.3:37666236-37666255 MS.gene018772:intron 50.0%
! TTGTTTTCGTTGGCCATCGC+TGG + chr1.3:37665790-37665809 MS.gene018772:intron 50.0%
! TTTTGACCGAGACCAAGAGC+AGG - chr1.3:37667582-37667601 None:intergenic 50.0%
!! CCTAATGCTGTTGGTGTTGG+TGG + chr1.3:37663781-37663800 MS.gene018772:CDS 50.0%
!! TGGGTTCTTTGCTGGCCTTT+GGG + chr1.3:37665472-37665491 MS.gene018772:intron 50.0%
!! TTGGGTTCTTTGCTGGCCTT+TGG + chr1.3:37665471-37665490 MS.gene018772:intron 50.0%
!!! CTCTCTCTGGCTTTTTAGGG+TGG + chr1.3:37665422-37665441 MS.gene018772:intron 50.0%
!!! CTCTCTGGCTTTTTAGGGTG+GGG + chr1.3:37665424-37665443 MS.gene018772:intron 50.0%
ACCAAGAGCAGGAACAGCCT+CGG - chr1.3:37667571-37667590 None:intergenic 55.0%
GCTGTTCCTGCTCTTGGTCT+CGG + chr1.3:37667573-37667592 MS.gene018772:CDS 55.0%
GGAGAGTTTGGGAAAACGCG+AGG - chr1.3:37666829-37666848 None:intergenic 55.0%
GGGGCATGCAATACCAAGCA+GGG - chr1.3:37665822-37665841 None:intergenic 55.0%
TATGGCCAGCTAAACGCCTG+CGG - chr1.3:37666767-37666786 None:intergenic 55.0%
TCCTGGTGGAGTTCTCTCTC+TGG + chr1.3:37665409-37665428 MS.gene018772:intron 55.0%
TCGTAACTGTTTGTCCCCCG+AGG + chr1.3:37667551-37667570 MS.gene018772:CDS 55.0%
! AGGGGCATGCAATACCAAGC+AGG - chr1.3:37665823-37665842 None:intergenic 55.0%
! AGGGTGGGGTATTCCCTCTT+TGG + chr1.3:37665438-37665457 MS.gene018772:intron 55.0%
!! GGGTTCTTTGCTGGCCTTTG+GGG + chr1.3:37665473-37665492 MS.gene018772:intron 55.0%
!! GGTTCTTTGCTGGCCTTTGG+GGG + chr1.3:37665474-37665493 MS.gene018772:intron 55.0%
!!! GGGTTTTTGGTTGCTCTGGG+CGG + chr1.3:37665361-37665380 MS.gene018772:intron 55.0%
AAGAGCAGGAACAGCCTCGG+GGG - chr1.3:37667568-37667587 None:intergenic 60.0%
AGATCAGCCGAGCCAGTTCC+TGG + chr1.3:37667210-37667229 MS.gene018772:CDS 60.0%
AGTTGCCGCAGGCGTTTAGC+TGG + chr1.3:37666759-37666778 MS.gene018772:CDS 60.0%
CAAGAGCAGGAACAGCCTCG+GGG - chr1.3:37667569-37667588 None:intergenic 60.0%
CCAAGAGCAGGAACAGCCTC+GGG - chr1.3:37667570-37667589 None:intergenic 60.0%
CTTGTCCTCAGCCGTTCTCC+TGG + chr1.3:37665392-37665411 MS.gene018772:intron 60.0%
GCCAGAGAGAGAACTCCACC+AGG - chr1.3:37665413-37665432 None:intergenic 60.0%
!! GGAACTGGCTCGGCTGATCT+CGG - chr1.3:37667210-37667229 None:intergenic 60.0%
CCCGAGGCTGTTCCTGCTCT+TGG + chr1.3:37667567-37667586 MS.gene018772:CDS 65.0%
CTCCACCAGGAGAACGGCTG+AGG - chr1.3:37665400-37665419 None:intergenic 65.0%
GTCCTCAGCCGTTCTCCTGG+TGG + chr1.3:37665395-37665414 MS.gene018772:intron 65.0%
TCGCTGGTGCCTTCCCTGCT+TGG + chr1.3:37665806-37665825 MS.gene018772:intron 65.0%
!! AGCAGGGAAGGCACCAGCGA+TGG - chr1.3:37665806-37665825 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 37663643 37667677 37663643 ID=MS.gene018772
chr1.3 mRNA 37663643 37667677 37663643 ID=MS.gene018772.t1;Parent=MS.gene018772
chr1.3 exon 37663643 37663986 37663643 ID=MS.gene018772.t1.exon1;Parent=MS.gene018772.t1
chr1.3 CDS 37663643 37663986 37663643 ID=cds.MS.gene018772.t1;Parent=MS.gene018772.t1
chr1.3 exon 37666722 37666861 37666722 ID=MS.gene018772.t1.exon2;Parent=MS.gene018772.t1
chr1.3 CDS 37666722 37666861 37666722 ID=cds.MS.gene018772.t1;Parent=MS.gene018772.t1
chr1.3 exon 37667124 37667677 37667124 ID=MS.gene018772.t1.exon3;Parent=MS.gene018772.t1
chr1.3 CDS 37667124 37667677 37667124 ID=cds.MS.gene018772.t1;Parent=MS.gene018772.t1
Gene Sequence

>MS.gene018772

ATGAGTTCAGGTTTTGTACCTTCTCCCTCTTCACAACCTAACTCATCTACCGAGTTTCTTGATGGATTAAAGTTTGGTCAAAAAATCTACTTTGAGGATGCAACAAGTACTGTTGTAGTAGCAGCTTCTCAAATCAAACCTAATGCTGTTGGTGTTGGTGGCTCTTCTTCTTCTTCATCATCTTCATCTTCAGGAATGAAGAGGGGAAATAATCATCCACGTAGGTGTCAAGTTGAAGCTTGTAAAGTAGATCTGAGTGGTGCTAAGGCTTATTATTCTAGACATAAAGTTTGTTGCATGCATTCAAAATCTCCTTCTGTTGTTGTTTCTGGTTTGGAGCAAAGGTTTTGCCAACAGTGTAGCAGGTCACATGTTCTTTAACTTCTATGTCTTTGACCATTCTACTTTTGTTTATAATTTATTAACTACTTCAAATATTCTTCCTTTTTTAGTGTTTTTTTCTTTCTATAATGGGTATGGTCTGGTTTAATTTTTTTCCTTCTTGTTTTGCCTAACTCATTTTGTCTTTTTTATTTTATTTTTTATTTTTTATGTTTTAAACTTTTAATATATATTGTTTGTTGGTTATTTATCTTCTATTTTTTTTATTTTATTATAGATTTCTTAGATGTTGTTGGATTGTTGTTTTATTTCATTTGAATTTGATAATGGCATATATATTGTGATCCTAATGTTCTTCTATTATTGGAGACTGGCTCATATTATATTTCTGTGTTTGATGCATCTCTGCCTACATTTATTTTTACTAGGATGGTTCGCTTCATGCATACCTGAAATTTCAGAATTTTATGATGTACCATTCTTTCCAAATTTCAAAGAAAAAATGGTCCCCCTTGAGAAGTTGATGTCAATCTCATACTAGTGTAGAAAAAATGATCCCACATGGCAAGTTATTTATTAAAACATCTTTGCTACATAAAATAATATTCATTCACCATTATACCTGGAAGACCCTTTTAGCTTTAGCCATGTGACATGTCCTACTGGTAAAAGAAGTGGGTAGTGAGAGGGTTAGTCTTAATGAAGGATAAGCATGGGATGATAATCACATAGATTATATATATTTTGAATTTTGTATTTCAATTTTTTTTTGACAAAATATTTTGTATTTCAATTTAAAAGGCTTTGGTTGATTGGATAATTTGTAAATGTATGTTTGGCTTATTGATGACCAATTTAAATTTAAAGATATTTCTACCAAAAAAAAGTGTAAGATGTTGTTTATTGGATAATTTGTGATTACTTAGAAAAAGGCTAATGAGTGTTTTTAGAGCAAACTAAAGTTTTCATTAGAAAGTGTAGATTTTGAAAAGGCAAATGTATTTGGTATTGTCATTACAATACCAGATATTTTAGGACTTCAACTATATTTTAAAATGTATGATGTTTTAGGACTCTCACTCCCTCCGTTTTTTTTTTCTTTTGTTGTTTTAGAACTTCAACTATATTTCAAAATATTTGAGTTCATGTTTCAAATAAATGTTTTGGGACTCTCTTACTTCTTATCGATAAGCATCATCTTATACTAAAGATGATGCTTATGAGTAAGAAGTAAGAGAGTGAAGTTTATTGGAATTCATGTTTCAGTATTATTTTGTATATTAAACCTTCGAGGCATAGGTTTTGCTGGCGATATGATATTTCTCATACAATGCATGAACACCACCAAAGGATGTGTAAATTACATCTTAGGTTTAGGGTTTTTGGTTGCTCTGGGCGGTTTGACTTCTTGTCCTCAGCCGTTCTCCTGGTGGAGTTCTCTCTCTGGCTTTTTAGGGTGGGGTATTCCCTCTTTGGAGAGTTAGGTTTGGGTTCTTTGCTGGCCTTTGGGGGTCGTGTTTGCTTAGGAGTGTTGTTGTTCTTGTTGTTCAGCCTGTTGTTGCAAGCATTTTGGGGGGTTTCTTTGGGTGTTTTGTGTGTTTTTTCACGAACATCACTTGTGTGACATTATGGTGTCAATGTCACGTGACATTGACCAATCATAGTGTGTCACGTGACATCCTTTATTTAAACAAATTACAAAACAAAAAATACATGTGAAAGAGAAAGAAGAAAACCAGATGTCACGTTGTGGTTGACCAATGCGACATGACATTGACACTACAATGTCAACCAAGGTTTGTCTGTTGTTTTCGTTGGCCATCGCTGGTGCCTTCCCTGCTTGGTATTGCATGCCCCTCTTGTAGTTTTTCTCATGCATTTATCTTTTGCTATTAAAAAATAATAATAAATCTTATGTTTGTATTTATGATAGAAGATTTGCTTAATGTTGTTGGTCGTGACCAAGAGCATCCACAATGAAGGATTTCAAGTTTTGGTGCTTAAATGGGTCATACGCGGACACATCATTCATTTATAATTTTTTAATAGTATTATTTAATGAGCATTAAGTCACTTCAACTCAACACCTTACACAAATCTTTTAAATGAGACTTACTAATAACTTTATATTATCTATCAATAACTCTATATCATCACATTTTAATATTTTAATATTAAATTATATGGGACCAACAAAGAGAGAGGGTGCTTATATGAGATCCTCTCCTCAATAGGTACCATTATGGATATGTCTACAACGGGGTACCTATGAGGTACCAATGCTTATAGAGATAAGCTAACCCCATTGGGGATGGTCTAAGAGCTCGTTTAGATAGTTTTCAACAATCATTTATAGTAAAGAAATGTGGAAATAATCTTGGAATGACTATAAGTCATTTAATTAATACCAATCCACACATAGAAATTAACCCCTGCATTTCAATTTCTTAATGATTGTTCCTACGTCTAACTTTTTCATAAGCATCGATAAGGCTTTTGGTAATAACTTAAGAGCCAAATTTTTATATCTATGGAGAAGGTCTTATGAATTAGAGGCCAATTTGAACCAGAGCCAAGTCAGTTTGAGTTTAAAAATCTCTCAGTTGCATGAGAGTTTTACAAAAATGTTAAATACTTCAAATATTCTCATTTTCTCTTTTGTACCACACTGTTACATAACCGTGGGATCGTTTTTATCTCAACGAAACTAACGTCCTCTTTGATAGAACTTGCACAGGTTTCATCAGCTTCCTGAATTCGATCAAGGAAAACGAAGTTGCCGCAGGCGTTTAGCTGGCCATAATGAAAGGCGGAGAAAGCCCCAACCAAGCTCATTTTTAACCTCGCGTTTTCCCAAACTCTCCTCACCTACTTTCGGTTAGAAACTATTCCTTCTGTTACCTTTTAAGGGTCATTTGTTTAGAAATTTGTTCCTTTTTATTTGTTTGATCGAAGTTCAAAGTAGTATCAACTATTTTTTGTCAAAACTATCCCTAACTTTTTATTTGAGAATTGAGATAGAGAATTAGGCTAAATGAGAGGATTACTAGTTAAGGGTCCTATGATAAATAGTTTCATCAAAAGTAATAAATTTTGTGTTTTTGTAGTATGTATAATTGTTTTGTTTTTGTGTCAACAGGTAACAATGGCAAAGCTAATAATGACTTTCTGATGGAATGTGCTTCATACCAAAAGTTTTCTATGGGAAATGCATTATCAACTCCGAGATCAGCCGAGCCAGTTCCTGGTAATCAAACAACACAATTTACCTGGCAAAACAACTCATCGACACCATCGGATTTTATCCTACAAGGAACAAACTTCCATGGTCCTCCTACTAGACATCCTCCAATAATGGATAACTACAATGAAGTCACAGATTCAAGCTGTGCTCTCTCTCTTCTGTCAAACCAAACATGGTACTCTAGAAACACAACAACACCAAGTGTTGAGATGAACAACTTGTTGAATTTCAATGGTTCACTCACTACACAATCTTCTCAAGTTGCACCCAATTATCATCTTCAAACAAATGCTTCTTCTTGGTTTTTAAAGGGCGTTGATTCTCGTAACTGTTTGTCCCCCGAGGCTGTTCCTGCTCTTGGTCTCGGTCAAAATTCGCAGGCTATTCATAGCGATCTTCGTGGTGAGGTCAACGTGTCACAAGGCAAGAACCATTACTGGCCACTTTAA
Protein sequence

>MS.gene018772.t1

MSSGFVPSPSSQPNSSTEFLDGLKFGQKIYFEDATSTVVVAASQIKPNAVGVGGSSSSSSSSSSGMKRGNNHPRRCQVEACKVDLSGAKAYYSRHKVCCMHSKSPSVVVSGLEQRFHQLPEFDQGKRSCRRRLAGHNERRRKPQPSSFLTSRFPKLSSPTFGNNGKANNDFLMECASYQKFSMGNALSTPRSAEPVPGNQTTQFTWQNNSSTPSDFILQGTNFHGPPTRHPPIMDNYNEVTDSSCALSLLSNQTWYSRNTTTPSVEMNNLLNFNGSLTTQSSQVAPNYHLQTNASSWFLKGVDSRNCLSPEAVPALGLGQNSQAIHSDLRGEVNVSQGKNHYWPL