Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04607.t1 | XP_003625236.2 | 94.4 | 340 | 15 | 2 | 1 | 339 | 75 | 411 | 9.40E-148 | 533.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04607.t1 | S4WUL1 | 37.7 | 374 | 166 | 11 | 2 | 339 | 13 | 355 | 2.8e-39 | 164.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04607.t1 | G7KVB2 | 94.4 | 340 | 15 | 2 | 1 | 339 | 1 | 337 | 6.8e-148 | 533.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene04607.t1 | TF | SBP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene018772 | MS.gene04607 | PPI |
| MS.gene04607 | MS.gene97631 | PPI |
| MS.gene04607 | MS.gene017969 | PPI |
| MS.gene04607 | MS.gene04608 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04607.t1 | MTR_7g092930 | 90.000 | 340 | 30 | 2 | 1 | 339 | 1 | 337 | 0.0 | 562 |
| MS.gene04607.t1 | MTR_1g053715 | 55.394 | 343 | 105 | 12 | 14 | 323 | 20 | 347 | 3.21e-103 | 307 |
| MS.gene04607.t1 | MTR_3g085180 | 36.981 | 265 | 119 | 7 | 17 | 256 | 120 | 361 | 1.89e-41 | 150 |
| MS.gene04607.t1 | MTR_7g444860 | 50.376 | 133 | 61 | 1 | 14 | 146 | 101 | 228 | 8.29e-38 | 137 |
| MS.gene04607.t1 | MTR_8g463140 | 70.732 | 82 | 24 | 0 | 64 | 145 | 62 | 143 | 4.18e-37 | 132 |
| MS.gene04607.t1 | MTR_4g109770 | 52.713 | 129 | 57 | 1 | 13 | 141 | 73 | 197 | 1.80e-36 | 137 |
| MS.gene04607.t1 | MTR_4g088555 | 72.727 | 77 | 21 | 0 | 64 | 140 | 60 | 136 | 5.95e-36 | 127 |
| MS.gene04607.t1 | MTR_2g461920 | 57.252 | 131 | 53 | 3 | 39 | 169 | 144 | 271 | 9.72e-36 | 136 |
| MS.gene04607.t1 | MTR_8g080690 | 36.090 | 266 | 145 | 8 | 4 | 251 | 86 | 344 | 6.20e-35 | 131 |
| MS.gene04607.t1 | MTR_3g099080 | 52.679 | 112 | 53 | 0 | 35 | 146 | 66 | 177 | 6.94e-35 | 131 |
| MS.gene04607.t1 | MTR_5g046670 | 71.429 | 77 | 22 | 0 | 65 | 141 | 242 | 318 | 5.03e-34 | 130 |
| MS.gene04607.t1 | MTR_8g005960 | 67.857 | 84 | 27 | 0 | 57 | 140 | 177 | 260 | 1.14e-33 | 127 |
| MS.gene04607.t1 | MTR_8g080680 | 35.200 | 250 | 139 | 7 | 18 | 251 | 84 | 326 | 1.22e-33 | 128 |
| MS.gene04607.t1 | MTR_2g014200 | 65.517 | 87 | 26 | 1 | 56 | 142 | 57 | 139 | 2.78e-33 | 120 |
| MS.gene04607.t1 | MTR_2g078770 | 71.053 | 76 | 22 | 0 | 65 | 140 | 56 | 131 | 3.09e-33 | 121 |
| MS.gene04607.t1 | MTR_7g028740 | 63.636 | 88 | 32 | 0 | 62 | 149 | 72 | 159 | 5.18e-33 | 125 |
| MS.gene04607.t1 | MTR_8g096780 | 59.091 | 88 | 36 | 0 | 62 | 149 | 94 | 181 | 1.57e-31 | 122 |
| MS.gene04607.t1 | MTR_8g080670 | 48.413 | 126 | 48 | 1 | 14 | 139 | 126 | 234 | 2.54e-31 | 122 |
| MS.gene04607.t1 | MTR_2g046550 | 51.261 | 119 | 51 | 1 | 52 | 170 | 124 | 235 | 2.65e-31 | 125 |
| MS.gene04607.t1 | MTR_1g086250 | 51.111 | 135 | 59 | 3 | 10 | 140 | 89 | 220 | 2.81e-31 | 125 |
| MS.gene04607.t1 | MTR_1g035010 | 58.333 | 96 | 40 | 0 | 51 | 146 | 88 | 183 | 1.45e-30 | 122 |
| MS.gene04607.t1 | MTR_7g110320 | 68.919 | 74 | 23 | 0 | 67 | 140 | 145 | 218 | 2.88e-29 | 119 |
| MS.gene04607.t1 | MTR_7g110320 | 68.919 | 74 | 23 | 0 | 67 | 140 | 145 | 218 | 4.67e-29 | 118 |
| MS.gene04607.t1 | MTR_2g020620 | 48.529 | 68 | 35 | 0 | 73 | 140 | 96 | 163 | 1.13e-16 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene04607.t1 | AT2G42200 | 42.708 | 384 | 119 | 17 | 17 | 339 | 32 | 375 | 4.22e-67 | 215 |
| MS.gene04607.t1 | AT3G57920 | 39.516 | 372 | 132 | 16 | 17 | 339 | 27 | 354 | 1.04e-62 | 203 |
| MS.gene04607.t1 | AT1G27370 | 47.887 | 142 | 56 | 3 | 8 | 141 | 119 | 250 | 4.76e-37 | 136 |
| MS.gene04607.t1 | AT5G43270 | 55.469 | 128 | 56 | 1 | 16 | 143 | 119 | 245 | 7.41e-37 | 137 |
| MS.gene04607.t1 | AT5G43270 | 55.469 | 128 | 56 | 1 | 16 | 143 | 119 | 245 | 7.41e-37 | 137 |
| MS.gene04607.t1 | AT5G43270 | 55.469 | 128 | 56 | 1 | 16 | 143 | 119 | 245 | 7.41e-37 | 137 |
| MS.gene04607.t1 | AT1G27370 | 47.887 | 142 | 56 | 3 | 8 | 141 | 119 | 250 | 1.75e-36 | 135 |
| MS.gene04607.t1 | AT1G27370 | 47.887 | 142 | 56 | 3 | 8 | 141 | 119 | 250 | 1.75e-36 | 135 |
| MS.gene04607.t1 | AT1G27370 | 47.887 | 142 | 56 | 3 | 8 | 141 | 119 | 250 | 1.75e-36 | 135 |
| MS.gene04607.t1 | AT1G27370 | 47.887 | 142 | 56 | 3 | 8 | 141 | 119 | 250 | 1.75e-36 | 135 |
| MS.gene04607.t1 | AT1G27370 | 47.887 | 142 | 56 | 3 | 8 | 141 | 119 | 250 | 1.75e-36 | 135 |
| MS.gene04607.t1 | AT1G27370 | 47.887 | 142 | 56 | 3 | 8 | 141 | 119 | 250 | 1.75e-36 | 135 |
| MS.gene04607.t1 | AT1G69170 | 54.015 | 137 | 51 | 3 | 51 | 185 | 109 | 235 | 2.68e-36 | 135 |
| MS.gene04607.t1 | AT1G27360 | 50.000 | 134 | 64 | 2 | 8 | 141 | 119 | 249 | 4.21e-36 | 135 |
| MS.gene04607.t1 | AT1G27360 | 50.000 | 134 | 64 | 2 | 8 | 141 | 119 | 249 | 4.21e-36 | 135 |
| MS.gene04607.t1 | AT1G27360 | 50.000 | 134 | 64 | 2 | 8 | 141 | 119 | 249 | 4.21e-36 | 135 |
| MS.gene04607.t1 | AT1G27360 | 50.000 | 134 | 64 | 2 | 8 | 141 | 119 | 249 | 4.21e-36 | 135 |
| MS.gene04607.t1 | AT2G33810 | 71.622 | 74 | 21 | 0 | 67 | 140 | 54 | 127 | 8.81e-35 | 124 |
| MS.gene04607.t1 | AT5G50670 | 48.000 | 150 | 71 | 2 | 4 | 146 | 31 | 180 | 2.45e-34 | 129 |
| MS.gene04607.t1 | AT5G50670 | 48.000 | 150 | 71 | 2 | 4 | 146 | 31 | 180 | 2.45e-34 | 129 |
| MS.gene04607.t1 | AT5G50570 | 48.000 | 150 | 71 | 2 | 4 | 146 | 31 | 180 | 2.45e-34 | 129 |
| MS.gene04607.t1 | AT5G50570 | 48.000 | 150 | 71 | 2 | 4 | 146 | 31 | 180 | 2.45e-34 | 129 |
| MS.gene04607.t1 | AT1G02065 | 52.800 | 125 | 48 | 2 | 16 | 140 | 148 | 261 | 8.79e-34 | 127 |
| MS.gene04607.t1 | AT3G15270 | 68.919 | 74 | 23 | 0 | 67 | 140 | 63 | 136 | 1.71e-33 | 122 |
| MS.gene04607.t1 | AT1G53160 | 46.667 | 135 | 55 | 3 | 55 | 187 | 47 | 166 | 9.41e-33 | 120 |
| MS.gene04607.t1 | AT1G53160 | 61.538 | 91 | 30 | 1 | 55 | 145 | 47 | 132 | 2.70e-32 | 119 |
| MS.gene04607.t1 | AT1G53160 | 61.538 | 91 | 30 | 1 | 55 | 145 | 47 | 132 | 2.70e-32 | 119 |
| MS.gene04607.t1 | AT2G47070 | 62.366 | 93 | 28 | 1 | 51 | 143 | 97 | 182 | 4.44e-32 | 127 |
| MS.gene04607.t1 | AT3G60030 | 49.587 | 121 | 61 | 0 | 26 | 146 | 86 | 206 | 5.91e-32 | 127 |
| MS.gene04607.t1 | AT1G76580 | 60.227 | 88 | 35 | 0 | 65 | 152 | 112 | 199 | 2.45e-30 | 122 |
| MS.gene04607.t1 | AT1G76580 | 60.227 | 88 | 35 | 0 | 65 | 152 | 112 | 199 | 2.62e-30 | 122 |
| MS.gene04607.t1 | AT1G76580 | 60.227 | 88 | 35 | 0 | 65 | 152 | 112 | 199 | 3.90e-30 | 121 |
| MS.gene04607.t1 | AT1G20980 | 62.222 | 90 | 33 | 1 | 51 | 140 | 105 | 193 | 7.07e-29 | 118 |
| MS.gene04607.t1 | AT5G18830 | 46.154 | 91 | 45 | 1 | 52 | 142 | 127 | 213 | 8.45e-21 | 94.0 |
| MS.gene04607.t1 | AT5G18830 | 46.154 | 91 | 45 | 1 | 52 | 142 | 127 | 213 | 8.73e-21 | 94.0 |
| MS.gene04607.t1 | AT5G18830 | 46.154 | 91 | 45 | 1 | 52 | 142 | 127 | 213 | 9.41e-21 | 94.0 |
| MS.gene04607.t1 | AT2G47070 | 75.472 | 53 | 13 | 0 | 91 | 143 | 1 | 53 | 3.74e-20 | 92.0 |
| MS.gene04607.t1 | AT1G02065 | 45.370 | 108 | 46 | 3 | 16 | 121 | 148 | 244 | 3.29e-19 | 85.9 |
Find 96 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCCTACTGTTACTGTTTC+TGG | 0.047497 | 7.4:+15702592 | MS.gene04607:CDS |
| TCTCTTAATGGCTTAAAATT+TGG | 0.163500 | 7.4:+15702346 | MS.gene04607:CDS |
| GATTGTTGTGGTCTGATTTC+CGG | 0.239907 | 7.4:-15705200 | None:intergenic |
| TCGGAAGAGTCCTCTCTTAA+TGG | 0.276595 | 7.4:+15702334 | MS.gene04607:CDS |
| GAATTTCTCAGACTAAGTTT+TGG | 0.340913 | 7.4:-15705166 | None:intergenic |
| ATTGTTGTGGTCTGATTTCC+GGG | 0.344809 | 7.4:-15705199 | None:intergenic |
| AACCTCACACCAATGGATTC+AGG | 0.357567 | 7.4:+15702298 | None:intergenic |
| AATAACATGCTGAATTTCAA+TGG | 0.376067 | 7.4:+15705421 | MS.gene04607:CDS |
| GCAGGGAAGGAGGCATTATA+TGG | 0.380825 | 7.4:+15705591 | MS.gene04607:CDS |
| TCTTCTTCTGGTTCAAAGAA+AGG | 0.384894 | 7.4:+15702448 | MS.gene04607:CDS |
| ATGTGACCCCGGCCAAGATC+GGG | 0.400840 | 7.4:-15705520 | None:intergenic |
| CGAGCTTGATCTGTCGCAGC+AGG | 0.402927 | 7.4:+15705573 | MS.gene04607:CDS |
| AACAATCGGTTGGCCTTGGC+CGG | 0.403146 | 7.4:+15705216 | MS.gene04607:CDS |
| CAGAGGTGGCAGCTTCTTGA+TGG | 0.405708 | 7.4:+15705129 | MS.gene04607:CDS |
| TTCAGGAGGCAACTCTTCTT+CGG | 0.406824 | 7.4:+15702315 | MS.gene04607:CDS |
| AGTTTCCTCGGGAGGATGTC+TGG | 0.417156 | 7.4:-15705308 | None:intergenic |
| GACTCCAGTGTAAGTTTCCT+CGG | 0.430936 | 7.4:-15705320 | None:intergenic |
| ATATGGATGTAGAACATTCC+AGG | 0.443177 | 7.4:+15705608 | MS.gene04607:CDS |
| CTCTTCTGTCAAATCAAACA+TGG | 0.449340 | 7.4:+15705365 | MS.gene04607:CDS |
| ATGTTATTCAATCCAGGACT+TGG | 0.463473 | 7.4:-15705406 | None:intergenic |
| CAGCTTGCTGAGTTTGATCA+AGG | 0.464199 | 7.4:+15704854 | MS.gene04607:CDS |
| AATGTGACCCCGGCCAAGAT+CGG | 0.466474 | 7.4:-15705521 | None:intergenic |
| AGGTTAAGAGAGAGCTGGGT+GGG | 0.469309 | 7.4:-15704931 | None:intergenic |
| CAATCGGTTGGCCTTGGCCG+GGG | 0.476765 | 7.4:+15705218 | MS.gene04607:CDS |
| TTGGCCTTGGCCGGGGAACA+CGG | 0.477293 | 7.4:+15705225 | MS.gene04607:CDS |
| ACAATCGGTTGGCCTTGGCC+GGG | 0.480117 | 7.4:+15705217 | MS.gene04607:CDS |
| TGACCATTGAGAAGATTCAT+AGG | 0.480203 | 7.4:-15705632 | None:intergenic |
| TTCTTGCAAGGTTCGGTAGG+TGG | 0.483739 | 7.4:+15705268 | MS.gene04607:CDS |
| TTCAGCATGTTATTCAATCC+AGG | 0.487732 | 7.4:-15705412 | None:intergenic |
| TATCTTCAAAATAGATTCGT+TGG | 0.488281 | 7.4:-15702369 | None:intergenic |
| TATGACCAGCTAGTCGTCTC+CGG | 0.489324 | 7.4:-15704889 | None:intergenic |
| CTACCGAACCTTGCAAGAAA+AGG | 0.489810 | 7.4:-15705264 | None:intergenic |
| CCACAACAATCGGTTGGCCT+TGG | 0.489925 | 7.4:+15705212 | MS.gene04607:CDS |
| TTGAGAAGATTCATAGGCCC+TGG | 0.491228 | 7.4:-15705626 | None:intergenic |
| GTGGTCTGATTTCCGGGTGG+TGG | 0.494603 | 7.4:-15705193 | None:intergenic |
| GACTCCGTGTTCCCCGGCCA+AGG | 0.497185 | 7.4:-15705229 | None:intergenic |
| CCACCTCGGTGTCAAGTTGA+AGG | 0.497533 | 7.4:+15702499 | MS.gene04607:CDS |
| ATAACATGCTGAATTTCAAT+GGG | 0.498202 | 7.4:+15705422 | MS.gene04607:CDS |
| CTGTTTCTGGTCTACAACAA+AGG | 0.499773 | 7.4:+15702605 | MS.gene04607:CDS |
| CGAAACGCAGAACCAAGTCC+TGG | 0.499881 | 7.4:+15705394 | MS.gene04607:CDS |
| GGAAATCAGACCACAACAAT+CGG | 0.506712 | 7.4:+15705202 | MS.gene04607:CDS |
| GTAGGTGGGACAAGCTTCCC+TGG | 0.516239 | 7.4:+15705283 | MS.gene04607:CDS |
| TCGGGAGGATGTCTGGCACC+AGG | 0.517700 | 7.4:-15705301 | None:intergenic |
| TCTTGCAAGGTTCGGTAGGT+GGG | 0.521061 | 7.4:+15705269 | MS.gene04607:CDS |
| AGAAGAAGAACTAGCAGCAA+TGG | 0.529953 | 7.4:-15702428 | None:intergenic |
| GGTTAAGAGAGAGCTGGGTG+GGG | 0.530104 | 7.4:-15704930 | None:intergenic |
| CCTCTCGGTAGCCAACTCTC+TGG | 0.530975 | 7.4:+15705550 | MS.gene04607:CDS |
| GTTAAGAGAGAGCTGGGTGG+GGG | 0.532570 | 7.4:-15704929 | None:intergenic |
| TCTGGTTCAAAGAAAGGAAG+AGG | 0.539167 | 7.4:+15702454 | MS.gene04607:CDS |
| ACGTGAGGTTAAGAGAGAGC+TGG | 0.539304 | 7.4:-15704936 | None:intergenic |
| CGTGAGGTTAAGAGAGAGCT+GGG | 0.546066 | 7.4:-15704935 | None:intergenic |
| CGGGAGGATGTCTGGCACCA+GGG | 0.551042 | 7.4:-15705300 | None:intergenic |
| CAACTTCCTACATCTTCTCA+TGG | 0.554762 | 7.4:+15705457 | MS.gene04607:CDS |
| GATCAAGCTCGCCAGAGAGT+TGG | 0.556325 | 7.4:-15705561 | None:intergenic |
| ACTCCAGTGTAAGTTTCCTC+GGG | 0.556391 | 7.4:-15705319 | None:intergenic |
| GATGGCGACTCCGTGTTCCC+CGG | 0.557604 | 7.4:-15705235 | None:intergenic |
| TCTTCTGTCAAATCAAACAT+GGG | 0.559601 | 7.4:+15705366 | MS.gene04607:CDS |
| AGTTGCCGGAGACGACTAGC+TGG | 0.563944 | 7.4:+15704884 | MS.gene04607:CDS |
| AGAAGAACTAGCAGCAATGG+TGG | 0.566347 | 7.4:-15702425 | None:intergenic |
| GGGCCTATGAATCTTCTCAA+TGG | 0.567201 | 7.4:+15705629 | MS.gene04607:CDS |
| TCCTACATCTTCTCATGGTG+TGG | 0.568881 | 7.4:+15705462 | MS.gene04607:CDS |
| GACCAGAAACAGTAACAGTA+GGG | 0.576648 | 7.4:-15702594 | None:intergenic |
| TATGGATGTAGAACATTCCA+GGG | 0.576787 | 7.4:+15705609 | MS.gene04607:CDS |
| AGATGTAGGAAGTTGTGTCA+TGG | 0.581014 | 7.4:-15705449 | None:intergenic |
| TTGATCTGTCGCAGCAGGGA+AGG | 0.589630 | 7.4:+15705578 | MS.gene04607:CDS |
| ATCTGTCGCAGCAGGGAAGG+AGG | 0.591353 | 7.4:+15705581 | MS.gene04607:CDS |
| ATCAGACCACAACAATCGGT+TGG | 0.596554 | 7.4:+15705206 | MS.gene04607:CDS |
| AGAAATTCACTTCCACCACC+CGG | 0.604886 | 7.4:+15705181 | MS.gene04607:CDS |
| GGTCACATTTCACAGCCTCT+CGG | 0.605085 | 7.4:+15705535 | MS.gene04607:CDS |
| AGACCAGAAACAGTAACAGT+AGG | 0.606139 | 7.4:-15702595 | None:intergenic |
| TGTGACCCCGGCCAAGATCG+GGG | 0.609613 | 7.4:-15705519 | None:intergenic |
| ATTGTTTGAAACTTGATGCA+TGG | 0.609636 | 7.4:-15705485 | None:intergenic |
| GGTTCAAAGAAAGGAAGAGG+TGG | 0.614988 | 7.4:+15702457 | MS.gene04607:CDS |
| TGCAAGAAAAGGTTGTCAGA+TGG | 0.616796 | 7.4:-15705253 | None:intergenic |
| GTGACCCCGGCCAAGATCGG+GGG | 0.625314 | 7.4:-15705518 | None:intergenic |
| CCTCCCGAGGAAACTTACAC+TGG | 0.634056 | 7.4:+15705316 | MS.gene04607:CDS |
| CCAGTGTAAGTTTCCTCGGG+AGG | 0.637090 | 7.4:-15705316 | None:intergenic |
| GAGGCTGTGAAATGTGACCC+CGG | 0.637432 | 7.4:-15705531 | None:intergenic |
| GAGCTTGATCTGTCGCAGCA+GGG | 0.644837 | 7.4:+15705574 | MS.gene04607:CDS |
| AGAAAGCCTGGCAAAACGTG+AGG | 0.647012 | 7.4:-15704951 | None:intergenic |
| CCAAGGCCAACCGATTGTTG+TGG | 0.647809 | 7.4:-15705212 | None:intergenic |
| CTTCTGTCAAATCAAACATG+GGG | 0.651750 | 7.4:+15705367 | MS.gene04607:CDS |
| GCCACACCATGAGAAGATGT+AGG | 0.656605 | 7.4:-15705463 | None:intergenic |
| GTTCAAAGAAAGGAAGAGGT+GGG | 0.656815 | 7.4:+15702458 | MS.gene04607:CDS |
| GAGTTGCCTCCTGAATCCAT+TGG | 0.670435 | 7.4:-15702307 | None:intergenic |
| TTCAACATTCTCAACCACCT+CGG | 0.675950 | 7.4:+15702485 | MS.gene04607:CDS |
| TGGTGCCAGACATCCTCCCG+AGG | 0.679309 | 7.4:+15705303 | MS.gene04607:CDS |
| CCTTCAACTTGACACCGAGG+TGG | 0.683119 | 7.4:-15702499 | None:intergenic |
| GAGGTTAAGAGAGAGCTGGG+TGG | 0.689151 | 7.4:-15704932 | None:intergenic |
| TCAAGTTTCAAACAATTACG+AGG | 0.690642 | 7.4:+15705492 | MS.gene04607:CDS |
| CCAGAGAGTTGGCTACCGAG+AGG | 0.703528 | 7.4:-15705550 | None:intergenic |
| ACAGGTAACAGTGACAGAGG+TGG | 0.704297 | 7.4:+15705115 | MS.gene04607:intron |
| TCGACAGGTAACAGTGACAG+AGG | 0.705027 | 7.4:+15705112 | MS.gene04607:intron |
| CTCACACCAATGGATTCAGG+AGG | 0.709638 | 7.4:+15702301 | None:intergenic |
| CATCCTTCAACTTGACACCG+AGG | 0.727400 | 7.4:-15702502 | None:intergenic |
| GTTGTGGTCTGATTTCCGGG+TGG | 0.754915 | 7.4:-15705196 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTGATTCTTTTTTTTATT+TGG | + | chr7.4:15703107-15703126 | MS.gene04607:intron | 10.0% |
| !!! | TATATATAATTTGATTTATC+TGG | + | chr7.4:15703300-15703319 | MS.gene04607:intron | 10.0% |
| !! | AATGAAATTGAATTAAAGTA+TGG | + | chr7.4:15703502-15703521 | MS.gene04607:intron | 15.0% |
| !! | ATTAAACAATTTCAAATACT+TGG | + | chr7.4:15705081-15705100 | MS.gene04607:intron | 15.0% |
| !! | CTAATTAATAAGATAACTAA+TGG | + | chr7.4:15703750-15703769 | MS.gene04607:intron | 15.0% |
| !! | TAATGTGAATAATTTGAAAA+TGG | + | chr7.4:15704306-15704325 | MS.gene04607:intron | 15.0% |
| !! | TGAATAAATAAGAAAACTAA+AGG | + | chr7.4:15704573-15704592 | MS.gene04607:intron | 15.0% |
| !!! | TTTTCAAATTATTCACATTA+TGG | - | chr7.4:15704306-15704325 | None:intergenic | 15.0% |
| !! | ATAAAACTAAACCAAATACT+TGG | - | chr7.4:15703583-15703602 | None:intergenic | 20.0% |
| !! | ATATAATCTTAACTAAGAGT+TGG | - | chr7.4:15704732-15704751 | None:intergenic | 20.0% |
| !! | ATTGCTCTCAAAAAAAAAAA+AGG | - | chr7.4:15702785-15702804 | None:intergenic | 20.0% |
| !! | TGTCTATCTTAATTTATCAT+GGG | + | chr7.4:15704703-15704722 | MS.gene04607:intron | 20.0% |
| !! | TTAGATTCTTAAAACATCTT+CGG | - | chr7.4:15704397-15704416 | None:intergenic | 20.0% |
| !!! | AACTTTTTTTTATAACTCCA+TGG | - | chr7.4:15703330-15703349 | None:intergenic | 20.0% |
| !!! | ACACATATCATTTTCATAAA+GGG | - | chr7.4:15703382-15703401 | None:intergenic | 20.0% |
| !!! | ATAAAAAAAAGTTCTGGTTT+AGG | + | chr7.4:15703337-15703356 | MS.gene04607:intron | 20.0% |
| !!! | TATTTCTGATAAAATGTGTA+TGG | + | chr7.4:15702696-15702715 | MS.gene04607:intron | 20.0% |
| !!! | TATTTTATTCTGTTATTCTC+CGG | + | chr7.4:15702807-15702826 | MS.gene04607:intron | 20.0% |
| !!! | TTCATTTTGTGATTATTCAA+TGG | + | chr7.4:15703924-15703943 | MS.gene04607:intron | 20.0% |
| ! | AAAAGTTGAAGAAGAAAAAG+AGG | - | chr7.4:15702676-15702695 | None:intergenic | 25.0% |
| ! | AAAGTATGGACTTAGAAATT+AGG | + | chr7.4:15703516-15703535 | MS.gene04607:intron | 25.0% |
| ! | AAGAAGAAAAAGAGGAAATA+GGG | - | chr7.4:15702668-15702687 | None:intergenic | 25.0% |
| ! | AATAACATGCTGAATTTCAA+TGG | + | chr7.4:15705421-15705440 | MS.gene04607:CDS | 25.0% |
| ! | AATAGTACTAATTCTCACTA+AGG | - | chr7.4:15703864-15703883 | None:intergenic | 25.0% |
| ! | AATCTAATTATCAGCGTTTA+TGG | + | chr7.4:15704410-15704429 | MS.gene04607:intron | 25.0% |
| ! | ACCTATAATACAATAAAACC+CGG | - | chr7.4:15702829-15702848 | None:intergenic | 25.0% |
| ! | AGGTTCATTTAGATCAATAA+AGG | - | chr7.4:15703616-15703635 | None:intergenic | 25.0% |
| ! | ATAACATGCTGAATTTCAAT+GGG | + | chr7.4:15705422-15705441 | MS.gene04607:CDS | 25.0% |
| ! | CTGCCTAAAAAATAACATAA+GGG | - | chr7.4:15704529-15704548 | None:intergenic | 25.0% |
| ! | GGAGTTATAAAAAAAAGTTC+TGG | + | chr7.4:15703331-15703350 | MS.gene04607:intron | 25.0% |
| ! | GTATGATAAAACCAAGTATT+TGG | + | chr7.4:15703569-15703588 | MS.gene04607:intron | 25.0% |
| ! | GTGTCTATCTTAATTTATCA+TGG | + | chr7.4:15704702-15704721 | MS.gene04607:intron | 25.0% |
| ! | TATCTTCAAAATAGATTCGT+TGG | - | chr7.4:15702372-15702391 | None:intergenic | 25.0% |
| ! | TATTATAGGTGTAGTATTGT+AGG | + | chr7.4:15702839-15702858 | MS.gene04607:intron | 25.0% |
| ! | TATTGATCTAAATGAACCTA+GGG | + | chr7.4:15703617-15703636 | MS.gene04607:intron | 25.0% |
| ! | TCTCTTAATGGCTTAAAATT+TGG | + | chr7.4:15702346-15702365 | MS.gene04607:CDS | 25.0% |
| ! | TTAGTGAGAATTAGTACTAT+TGG | + | chr7.4:15703863-15703882 | MS.gene04607:intron | 25.0% |
| ! | TTATTGATCTAAATGAACCT+AGG | + | chr7.4:15703616-15703635 | MS.gene04607:intron | 25.0% |
| ! | TTCAACTTGTACTAAATTTC+TGG | + | chr7.4:15705055-15705074 | MS.gene04607:intron | 25.0% |
| !! | AAATTTTAAGCCATTAAGAG+AGG | - | chr7.4:15702347-15702366 | None:intergenic | 25.0% |
| !! | AACCAACATTCTTATGTTTT+AGG | + | chr7.4:15704500-15704519 | MS.gene04607:intron | 25.0% |
| !! | AAGAATCAAATTCTCTGAAA+AGG | - | chr7.4:15703098-15703117 | None:intergenic | 25.0% |
| !! | AATTTCTCAGACTAAGTTTT+GGG | - | chr7.4:15705168-15705187 | None:intergenic | 25.0% |
| !! | ACTTTCAGTTTTTGTTCAAT+TGG | + | chr7.4:15705026-15705045 | MS.gene04607:intron | 25.0% |
| !! | ATTTTATTCTGTTATTCTCC+GGG | + | chr7.4:15702808-15702827 | MS.gene04607:intron | 25.0% |
| !! | CACACATATCATTTTCATAA+AGG | - | chr7.4:15703383-15703402 | None:intergenic | 25.0% |
| !! | TGCTTTTGATAAGTTTGATT+TGG | + | chr7.4:15702993-15703012 | MS.gene04607:intron | 25.0% |
| !!! | GCTTTTGATAAGTTTGATTT+GGG | + | chr7.4:15702994-15703013 | MS.gene04607:intron | 25.0% |
| AAAACGACATAAACTACACT+TGG | - | chr7.4:15704194-15704213 | None:intergenic | 30.0% | |
| AAACTAAAGGAAAGATCAGT+AGG | + | chr7.4:15704586-15704605 | MS.gene04607:intron | 30.0% | |
| AGAAGAAAAAGAGGAAATAG+GGG | - | chr7.4:15702667-15702686 | None:intergenic | 30.0% | |
| CCTGCCTAAAAAATAACATA+AGG | - | chr7.4:15704530-15704549 | None:intergenic | 30.0% | |
| CTCTGATATGTAGTAAGTTA+AGG | + | chr7.4:15704267-15704286 | MS.gene04607:intron | 30.0% | |
| CTGATAAAATGTGTATGGTA+AGG | + | chr7.4:15702701-15702720 | MS.gene04607:intron | 30.0% | |
| CTTAACTTACTACATATCAG+AGG | - | chr7.4:15704269-15704288 | None:intergenic | 30.0% | |
| GAACAAAAACTGAAAGTAGA+GGG | - | chr7.4:15705023-15705042 | None:intergenic | 30.0% | |
| GAAGAAGAAAAAGAGGAAAT+AGG | - | chr7.4:15702669-15702688 | None:intergenic | 30.0% | |
| GAATCTCAAATTTCTTCGAT+AGG | + | chr7.4:15704677-15704696 | MS.gene04607:intron | 30.0% | |
| GGAAAAAAACAAAGTACAAC+CGG | - | chr7.4:15703031-15703050 | None:intergenic | 30.0% | |
| GTGTTAACAAGTCAGTTATA+TGG | - | chr7.4:15703842-15703861 | None:intergenic | 30.0% | |
| TCAAGTTTCAAACAATTACG+AGG | + | chr7.4:15705492-15705511 | MS.gene04607:CDS | 30.0% | |
| TCATACTATGTTATCCTGTT+TGG | + | chr7.4:15702875-15702894 | MS.gene04607:intron | 30.0% | |
| TCTTCTGTCAAATCAAACAT+GGG | + | chr7.4:15705366-15705385 | MS.gene04607:CDS | 30.0% | |
| TGAACAAAAACTGAAAGTAG+AGG | - | chr7.4:15705024-15705043 | None:intergenic | 30.0% | |
| TGCCTAAAACATAAGAATGT+TGG | - | chr7.4:15704505-15704524 | None:intergenic | 30.0% | |
| ! | AACATAAGAATGTTGGTTGT+TGG | - | chr7.4:15704498-15704517 | None:intergenic | 30.0% |
| ! | AAGTTTTTGACCACAAGATT+CGG | + | chr7.4:15704081-15704100 | MS.gene04607:intron | 30.0% |
| ! | ATTGTTTGAAACTTGATGCA+TGG | - | chr7.4:15705488-15705507 | None:intergenic | 30.0% |
| ! | GAATTTCTCAGACTAAGTTT+TGG | - | chr7.4:15705169-15705188 | None:intergenic | 30.0% |
| ! | TAGGATACAATTTTCAACCT+TGG | - | chr7.4:15704232-15704251 | None:intergenic | 30.0% |
| ! | TCGAAGAAATTTGAGATTCA+CGG | - | chr7.4:15704676-15704695 | None:intergenic | 30.0% |
| !! | AAAAAAGTTCTGGTTTAGGA+TGG | + | chr7.4:15703341-15703360 | MS.gene04607:intron | 30.0% |
| !! | AGAGGTGTACTATTTTACTT+AGG | - | chr7.4:15704251-15704270 | None:intergenic | 30.0% |
| !! | CAAACAAGCATGTATTTTAG+AGG | + | chr7.4:15704031-15704050 | MS.gene04607:intron | 30.0% |
| !!! | AAGCATTTTAAAGCTAAGAC+AGG | - | chr7.4:15703052-15703071 | None:intergenic | 30.0% |
| !!! | AGTGTAGTTTATGTCGTTTT+AGG | + | chr7.4:15704194-15704213 | MS.gene04607:intron | 30.0% |
| !!! | ATTTTGAGACTAGACTGATT+GGG | + | chr7.4:15704615-15704634 | MS.gene04607:intron | 30.0% |
| !!! | CAGCCCTTATGTTATTTTTT+AGG | + | chr7.4:15704523-15704542 | MS.gene04607:intron | 30.0% |
| !!! | CCTTATGTTATTTTTTAGGC+AGG | + | chr7.4:15704527-15704546 | MS.gene04607:intron | 30.0% |
| !!! | TATGTTATTTTTTAGGCAGG+CGG | + | chr7.4:15704530-15704549 | MS.gene04607:intron | 30.0% |
| !!! | TATTTTGAGACTAGACTGAT+TGG | + | chr7.4:15704614-15704633 | MS.gene04607:intron | 30.0% |
| !!! | TCCGGGTTTTATTGTATTAT+AGG | + | chr7.4:15702825-15702844 | MS.gene04607:intron | 30.0% |
| AAAAACAGATGAAGAAAGCC+TGG | - | chr7.4:15704966-15704985 | None:intergenic | 35.0% | |
| AAAGGAAGTTCTTGAGCTAA+TGG | + | chr7.4:15703459-15703478 | MS.gene04607:intron | 35.0% | |
| AAATGAACCTAGGGTTCTTA+AGG | + | chr7.4:15703626-15703645 | MS.gene04607:intron | 35.0% | |
| AAGGAAGTTCTTGAGCTAAT+GGG | + | chr7.4:15703460-15703479 | MS.gene04607:intron | 35.0% | |
| ACGACTACGACTATCATAAT+TGG | + | chr7.4:15704057-15704076 | MS.gene04607:intron | 35.0% | |
| ACTATGTTATCCTGTTTGGT+CGG | + | chr7.4:15702879-15702898 | MS.gene04607:intron | 35.0% | |
| AGAGGAAATAGGGGTTAAAA+AGG | - | chr7.4:15702658-15702677 | None:intergenic | 35.0% | |
| AGCTAATGGGGAAATGAAAA+AGG | + | chr7.4:15703473-15703492 | MS.gene04607:intron | 35.0% | |
| ATATGGATGTAGAACATTCC+AGG | + | chr7.4:15705608-15705627 | MS.gene04607:CDS | 35.0% | |
| ATCAAGGAAAAAGAAGTTGC+CGG | + | chr7.4:15704870-15704889 | MS.gene04607:CDS | 35.0% | |
| ATGTGTATGGTAAGGACATT+AGG | + | chr7.4:15702709-15702728 | MS.gene04607:intron | 35.0% | |
| ATGTTATTCAATCCAGGACT+TGG | - | chr7.4:15705409-15705428 | None:intergenic | 35.0% | |
| ATTAGTACTATTGGTGTAGC+TGG | + | chr7.4:15703872-15703891 | MS.gene04607:intron | 35.0% | |
| ATTCTTGAGCAATGGTAACA+TGG | - | chr7.4:15704780-15704799 | None:intergenic | 35.0% | |
| CAAAATGAAAGCAAAAGACC+TGG | - | chr7.4:15703913-15703932 | None:intergenic | 35.0% | |
| CGTTCTGTTTAGTGTATATG+TGG | + | chr7.4:15704118-15704137 | MS.gene04607:intron | 35.0% | |
| CTCTTCTGTCAAATCAAACA+TGG | + | chr7.4:15705365-15705384 | MS.gene04607:CDS | 35.0% | |
| CTTCTGTCAAATCAAACATG+GGG | + | chr7.4:15705367-15705386 | MS.gene04607:CDS | 35.0% | |
| GAGGAAATAGGGGTTAAAAA+GGG | - | chr7.4:15702657-15702676 | None:intergenic | 35.0% | |
| TAGACTCCTACATACCTAAA+CGG | - | chr7.4:15703269-15703288 | None:intergenic | 35.0% | |
| TAGGCTGCAGTTATGTTATT+AGG | + | chr7.4:15704465-15704484 | MS.gene04607:intron | 35.0% | |
| TATAATTGAACCGACCAAAC+AGG | - | chr7.4:15702892-15702911 | None:intergenic | 35.0% | |
| TATGGATGTAGAACATTCCA+GGG | + | chr7.4:15705609-15705628 | MS.gene04607:CDS | 35.0% | |
| TCTTGTACTTCAGTTGTGTT+AGG | + | chr7.4:15703144-15703163 | MS.gene04607:intron | 35.0% | |
| TGACCATTGAGAAGATTCAT+AGG | - | chr7.4:15705635-15705654 | None:intergenic | 35.0% | |
| TGTGTATGGTAAGGACATTA+GGG | + | chr7.4:15702710-15702729 | MS.gene04607:intron | 35.0% | |
| TTCAGCATGTTATTCAATCC+AGG | - | chr7.4:15705415-15705434 | None:intergenic | 35.0% | |
| ! | AGGCTTTCTTCATCTGTTTT+TGG | + | chr7.4:15704965-15704984 | MS.gene04607:CDS | 35.0% |
| ! | GTACTTACCTTTTCTTGACT+CGG | + | chr7.4:15703977-15703996 | MS.gene04607:intron | 35.0% |
| ! | GTGTGAGATTTTGTTCCTTT+TGG | + | chr7.4:15703400-15703419 | MS.gene04607:intron | 35.0% |
| !! | ACAAGCATGTATTTTAGAGG+TGG | + | chr7.4:15704034-15704053 | MS.gene04607:intron | 35.0% |
| !! | TCTTCTTCTGGTTCAAAGAA+AGG | + | chr7.4:15702448-15702467 | MS.gene04607:CDS | 35.0% |
| !!! | ATACTTTGGTGTTTTGAGTC+TGG | + | chr7.4:15703240-15703259 | MS.gene04607:intron | 35.0% |
| !!! | TTTATGTCGTTTTAGGCGTA+TGG | + | chr7.4:15704201-15704220 | MS.gene04607:intron | 35.0% |
| AAGCTCACAGATTCTTGGAA+AGG | + | chr7.4:15704645-15704664 | MS.gene04607:intron | 40.0% | |
| AGAAGAAGAACTAGCAGCAA+TGG | - | chr7.4:15702431-15702450 | None:intergenic | 40.0% | |
| AGACCAGAAACAGTAACAGT+AGG | - | chr7.4:15702598-15702617 | None:intergenic | 40.0% | |
| AGACTCCTACATACCTAAAC+GGG | - | chr7.4:15703268-15703287 | None:intergenic | 40.0% | |
| AGATGTAGGAAGTTGTGTCA+TGG | - | chr7.4:15705452-15705471 | None:intergenic | 40.0% | |
| AGGAAGTTCTTGAGCTAATG+GGG | + | chr7.4:15703461-15703480 | MS.gene04607:intron | 40.0% | |
| ATATGGTACGCACACTAACA+TGG | - | chr7.4:15703825-15703844 | None:intergenic | 40.0% | |
| ATTGTTGTGGTCTGATTTCC+GGG | - | chr7.4:15705202-15705221 | None:intergenic | 40.0% | |
| CAACTTCCTACATCTTCTCA+TGG | + | chr7.4:15705457-15705476 | MS.gene04607:CDS | 40.0% | |
| CAGTGACGCATTGTATATTC+TGG | - | chr7.4:15703215-15703234 | None:intergenic | 40.0% | |
| GAAAGCAAAAGACCTGGATT+GGG | - | chr7.4:15703907-15703926 | None:intergenic | 40.0% | |
| GAACACTAAAGAGGACCAAA+AGG | - | chr7.4:15703418-15703437 | None:intergenic | 40.0% | |
| GACCAGAAACAGTAACAGTA+GGG | - | chr7.4:15702597-15702616 | None:intergenic | 40.0% | |
| GACGAACAATTCTTGAGCAA+TGG | - | chr7.4:15704788-15704807 | None:intergenic | 40.0% | |
| GATTGTTGTGGTCTGATTTC+CGG | - | chr7.4:15705203-15705222 | None:intergenic | 40.0% | |
| GGAAATCAGACCACAACAAT+CGG | + | chr7.4:15705202-15705221 | MS.gene04607:CDS | 40.0% | |
| GGTATGTAGGAGTCTAGAAA+AGG | + | chr7.4:15703273-15703292 | MS.gene04607:intron | 40.0% | |
| GTATCATGTGGCACTTGTAA+AGG | + | chr7.4:15703441-15703460 | MS.gene04607:intron | 40.0% | |
| GTTCAAAGAAAGGAAGAGGT+GGG | + | chr7.4:15702458-15702477 | MS.gene04607:CDS | 40.0% | |
| TATCCTACCGAGTCAAGAAA+AGG | - | chr7.4:15703987-15704006 | None:intergenic | 40.0% | |
| TATGGTACGCACACTAACAT+GGG | - | chr7.4:15703824-15703843 | None:intergenic | 40.0% | |
| TCAGCAAGCTGATGAAATCT+GGG | - | chr7.4:15704845-15704864 | None:intergenic | 40.0% | |
| TGAAAGCAAAAGACCTGGAT+TGG | - | chr7.4:15703908-15703927 | None:intergenic | 40.0% | |
| TGATACCAGGAACACTAAAG+AGG | - | chr7.4:15703427-15703446 | None:intergenic | 40.0% | |
| TGCAAGAAAAGGTTGTCAGA+TGG | - | chr7.4:15705256-15705275 | None:intergenic | 40.0% | |
| TGCTAATGAGAGTTTGAGAG+TGG | + | chr7.4:15703678-15703697 | MS.gene04607:intron | 40.0% | |
| TTAGTGTTCCTGGTATCATG+TGG | + | chr7.4:15703429-15703448 | MS.gene04607:intron | 40.0% | |
| TTCAACATTCTCAACCACCT+CGG | + | chr7.4:15702485-15702504 | MS.gene04607:CDS | 40.0% | |
| TTGATTTATCTGGTCTGCCA+TGG | + | chr7.4:15703310-15703329 | MS.gene04607:intron | 40.0% | |
| TTTCCAAGAATCTGTGAGCT+TGG | - | chr7.4:15704646-15704665 | None:intergenic | 40.0% | |
| ! | CAACCTTTTCTTGCAAGGTT+CGG | + | chr7.4:15705261-15705280 | MS.gene04607:CDS | 40.0% |
| ! | GCTAGTTCTTCTTCTTCTTC+TGG | + | chr7.4:15702436-15702455 | MS.gene04607:CDS | 40.0% |
| ! | TACTTGGCACTTTTATCGAC+AGG | + | chr7.4:15705097-15705116 | MS.gene04607:intron | 40.0% |
| ! | TCTGACAACCTTTTCTTGCA+AGG | + | chr7.4:15705256-15705275 | MS.gene04607:CDS | 40.0% |
| ! | TCTGGTTCAAAGAAAGGAAG+AGG | + | chr7.4:15702454-15702473 | MS.gene04607:CDS | 40.0% |
| !! | CTGTTTCTGGTCTACAACAA+AGG | + | chr7.4:15702605-15702624 | MS.gene04607:CDS | 40.0% |
| !! | GATTTGGGTTGATTGTGTTC+CGG | + | chr7.4:15703009-15703028 | MS.gene04607:intron | 40.0% |
| !! | GGTTTTGTCAACAATGTAGC+AGG | + | chr7.4:15702626-15702645 | MS.gene04607:CDS | 40.0% |
| !!! | TTACCTTTTCTTGACTCGGT+AGG | + | chr7.4:15703981-15704000 | MS.gene04607:intron | 40.0% |
| AAGCTGATGAAATCTGGGCA+AGG | - | chr7.4:15704840-15704859 | None:intergenic | 45.0% | |
| ACCACAAGATTCGGAGAACA+TGG | + | chr7.4:15704090-15704109 | MS.gene04607:intron | 45.0% | |
| ACCATGTTCTCCGAATCTTG+TGG | - | chr7.4:15704094-15704113 | None:intergenic | 45.0% | |
| ACTACACTTGGAACAAGCAC+CGG | - | chr7.4:15704182-15704201 | None:intergenic | 45.0% | |
| ACTCCAGTGTAAGTTTCCTC+GGG | - | chr7.4:15705322-15705341 | None:intergenic | 45.0% | |
| AGAAATTCACTTCCACCACC+CGG | + | chr7.4:15705181-15705200 | MS.gene04607:CDS | 45.0% | |
| AGAAGAACTAGCAGCAATGG+TGG | - | chr7.4:15702428-15702447 | None:intergenic | 45.0% | |
| AGACCAAGCTCACAGATTCT+TGG | + | chr7.4:15704640-15704659 | MS.gene04607:intron | 45.0% | |
| ATCAGACCACAACAATCGGT+TGG | + | chr7.4:15705206-15705225 | MS.gene04607:CDS | 45.0% | |
| ATGAAATCTGGGCAAGGTTG+TGG | - | chr7.4:15704834-15704853 | None:intergenic | 45.0% | |
| ATGCAGACCTTAAGAACCCT+AGG | - | chr7.4:15703636-15703655 | None:intergenic | 45.0% | |
| CTACCGAACCTTGCAAGAAA+AGG | - | chr7.4:15705267-15705286 | None:intergenic | 45.0% | |
| CTCAGCAAGCTGATGAAATC+TGG | - | chr7.4:15704846-15704865 | None:intergenic | 45.0% | |
| CTCGGTAGGATAGTGTTCAA+TGG | + | chr7.4:15703995-15704014 | MS.gene04607:intron | 45.0% | |
| GACTCCAGTGTAAGTTTCCT+CGG | - | chr7.4:15705323-15705342 | None:intergenic | 45.0% | |
| GACTCCTACATACCTAAACG+GGG | - | chr7.4:15703267-15703286 | None:intergenic | 45.0% | |
| GCGTCACTGAGCATATACTT+TGG | + | chr7.4:15703226-15703245 | MS.gene04607:intron | 45.0% | |
| GCTCAAGAATTGTTCGTCTC+TGG | + | chr7.4:15704790-15704809 | MS.gene04607:intron | 45.0% | |
| GGGCCTATGAATCTTCTCAA+TGG | + | chr7.4:15705629-15705648 | MS.gene04607:CDS | 45.0% | |
| GGTTCAAAGAAAGGAAGAGG+TGG | + | chr7.4:15702457-15702476 | MS.gene04607:CDS | 45.0% | |
| GTGTAGCTGCAATAGCTTTC+CGG | + | chr7.4:15704160-15704179 | MS.gene04607:intron | 45.0% | |
| TACAAGTGCCACATGATACC+AGG | - | chr7.4:15703440-15703459 | None:intergenic | 45.0% | |
| TCATGCTATCGTGTGGTCAT+TGG | + | chr7.4:15703706-15703725 | MS.gene04607:intron | 45.0% | |
| TCCTACATCTTCTCATGGTG+TGG | + | chr7.4:15705462-15705481 | MS.gene04607:CDS | 45.0% | |
| TCGGAAGAGTCCTCTCTTAA+TGG | + | chr7.4:15702334-15702353 | MS.gene04607:CDS | 45.0% | |
| TGCCCTACTGTTACTGTTTC+TGG | + | chr7.4:15702592-15702611 | MS.gene04607:CDS | 45.0% | |
| TTCAGGAGGCAACTCTTCTT+CGG | + | chr7.4:15702315-15702334 | MS.gene04607:CDS | 45.0% | |
| TTGAGAAGATTCATAGGCCC+TGG | - | chr7.4:15705629-15705648 | None:intergenic | 45.0% | |
| TTGGTCCTCTTTAGTGTTCC+TGG | + | chr7.4:15703419-15703438 | MS.gene04607:intron | 45.0% | |
| ! | TCTTAACCTCACGTTTTGCC+AGG | + | chr7.4:15704945-15704964 | MS.gene04607:CDS | 45.0% |
| !! | CAGCTTGCTGAGTTTGATCA+AGG | + | chr7.4:15704854-15704873 | MS.gene04607:CDS | 45.0% |
| !! | CTTTTCTTGCAAGGTTCGGT+AGG | + | chr7.4:15705265-15705284 | MS.gene04607:CDS | 45.0% |
| !! | TATTATATTATATTAATGTT+AGG | + | chr7.4:15704446-15704465 | MS.gene04607:intron | 5.0% |
| ACAGGTAACAGTGACAGAGG+TGG | + | chr7.4:15705115-15705134 | MS.gene04607:intron | 50.0% | |
| ACGTGAGGTTAAGAGAGAGC+TGG | - | chr7.4:15704939-15704958 | None:intergenic | 50.0% | |
| AGAAAGCCTGGCAAAACGTG+AGG | - | chr7.4:15704954-15704973 | None:intergenic | 50.0% | |
| AGGTTAAGAGAGAGCTGGGT+GGG | - | chr7.4:15704934-15704953 | None:intergenic | 50.0% | |
| CATCCTTCAACTTGACACCG+AGG | - | chr7.4:15702505-15702524 | None:intergenic | 50.0% | |
| CGTGAGGTTAAGAGAGAGCT+GGG | - | chr7.4:15704938-15704957 | None:intergenic | 50.0% | |
| GCCACACCATGAGAAGATGT+AGG | - | chr7.4:15705466-15705485 | None:intergenic | 50.0% | |
| GGTCACATTTCACAGCCTCT+CGG | + | chr7.4:15705535-15705554 | MS.gene04607:CDS | 50.0% | |
| GTACGCACACTAACATGGGT+TGG | - | chr7.4:15703820-15703839 | None:intergenic | 50.0% | |
| TATGACCAGCTAGTCGTCTC+CGG | - | chr7.4:15704892-15704911 | None:intergenic | 50.0% | |
| TCGACAGGTAACAGTGACAG+AGG | + | chr7.4:15705112-15705131 | MS.gene04607:intron | 50.0% | |
| TGGATAGTGCAACCCAATCC+AGG | + | chr7.4:15703892-15703911 | MS.gene04607:intron | 50.0% | |
| TGGTCCCCGTTTAGGTATGT+AGG | + | chr7.4:15703260-15703279 | MS.gene04607:intron | 50.0% | |
| TTAGGCGTATGGCTCATCCA+AGG | + | chr7.4:15704212-15704231 | MS.gene04607:intron | 50.0% | |
| TTTGAGTCTGGTCCCCGTTT+AGG | + | chr7.4:15703252-15703271 | MS.gene04607:intron | 50.0% | |
| ! | TCTTGCAAGGTTCGGTAGGT+GGG | + | chr7.4:15705269-15705288 | MS.gene04607:CDS | 50.0% |
| ! | TTCTTGCAAGGTTCGGTAGG+TGG | + | chr7.4:15705268-15705287 | MS.gene04607:CDS | 50.0% |
| !! | GCAGGGAAGGAGGCATTATA+TGG | + | chr7.4:15705591-15705610 | MS.gene04607:CDS | 50.0% |
| AATGTGACCCCGGCCAAGAT+CGG | - | chr7.4:15705524-15705543 | None:intergenic | 55.0% | |
| AGTTTCCTCGGGAGGATGTC+TGG | - | chr7.4:15705311-15705330 | None:intergenic | 55.0% | |
| CAGAGGTGGCAGCTTCTTGA+TGG | + | chr7.4:15705129-15705148 | MS.gene04607:CDS | 55.0% | |
| CCAAGGCCAACCGATTGTTG+TGG | - | chr7.4:15705215-15705234 | None:intergenic | 55.0% | |
| CCAGTGTAAGTTTCCTCGGG+AGG | - | chr7.4:15705319-15705338 | None:intergenic | 55.0% | |
| CCTCCCGAGGAAACTTACAC+TGG | + | chr7.4:15705316-15705335 | MS.gene04607:CDS | 55.0% | |
| CCTTCAACTTGACACCGAGG+TGG | - | chr7.4:15702502-15702521 | None:intergenic | 55.0% | |
| CGAAACGCAGAACCAAGTCC+TGG | + | chr7.4:15705394-15705413 | MS.gene04607:CDS | 55.0% | |
| GAGCTTGATCTGTCGCAGCA+GGG | + | chr7.4:15705574-15705593 | MS.gene04607:CDS | 55.0% | |
| GAGGCTGTGAAATGTGACCC+CGG | - | chr7.4:15705534-15705553 | None:intergenic | 55.0% | |
| GAGGTTAAGAGAGAGCTGGG+TGG | - | chr7.4:15704935-15704954 | None:intergenic | 55.0% | |
| GATCAAGCTCGCCAGAGAGT+TGG | - | chr7.4:15705564-15705583 | None:intergenic | 55.0% | |
| GGCTGCATCATGCTATCGTG+TGG | + | chr7.4:15703699-15703718 | MS.gene04607:intron | 55.0% | |
| GGTTAAGAGAGAGCTGGGTG+GGG | - | chr7.4:15704933-15704952 | None:intergenic | 55.0% | |
| GTTAAGAGAGAGCTGGGTGG+GGG | - | chr7.4:15704932-15704951 | None:intergenic | 55.0% | |
| GTTGTGGTCTGATTTCCGGG+TGG | - | chr7.4:15705199-15705218 | None:intergenic | 55.0% | |
| TACGAGGTTTCCCCCGATCT+TGG | + | chr7.4:15705508-15705527 | MS.gene04607:CDS | 55.0% | |
| TTGATCTGTCGCAGCAGGGA+AGG | + | chr7.4:15705578-15705597 | MS.gene04607:CDS | 55.0% | |
| !! | AACAATCGGTTGGCCTTGGC+CGG | + | chr7.4:15705216-15705235 | MS.gene04607:CDS | 55.0% |
| !! | CCACAACAATCGGTTGGCCT+TGG | + | chr7.4:15705212-15705231 | MS.gene04607:CDS | 55.0% |
| !! | CCACCTCGGTGTCAAGTTGA+AGG | + | chr7.4:15702499-15702518 | MS.gene04607:CDS | 55.0% |
| AGGTTTCCCCCGATCTTGGC+CGG | + | chr7.4:15705512-15705531 | MS.gene04607:CDS | 60.0% | |
| AGTTGCCGGAGACGACTAGC+TGG | + | chr7.4:15704884-15704903 | MS.gene04607:CDS | 60.0% | |
| ATCTGTCGCAGCAGGGAAGG+AGG | + | chr7.4:15705581-15705600 | MS.gene04607:CDS | 60.0% | |
| ATGTGACCCCGGCCAAGATC+GGG | - | chr7.4:15705523-15705542 | None:intergenic | 60.0% | |
| CCAGAGAGTTGGCTACCGAG+AGG | - | chr7.4:15705553-15705572 | None:intergenic | 60.0% | |
| CCTCTCGGTAGCCAACTCTC+TGG | + | chr7.4:15705550-15705569 | MS.gene04607:CDS | 60.0% | |
| CGAGCTTGATCTGTCGCAGC+AGG | + | chr7.4:15705573-15705592 | MS.gene04607:CDS | 60.0% | |
| GTAGGTGGGACAAGCTTCCC+TGG | + | chr7.4:15705283-15705302 | MS.gene04607:CDS | 60.0% | |
| GTGGTCTGATTTCCGGGTGG+TGG | - | chr7.4:15705196-15705215 | None:intergenic | 60.0% | |
| !! | ACAATCGGTTGGCCTTGGCC+GGG | + | chr7.4:15705217-15705236 | MS.gene04607:CDS | 60.0% |
| CGGGAGGATGTCTGGCACCA+GGG | - | chr7.4:15705303-15705322 | None:intergenic | 65.0% | |
| GATGGCGACTCCGTGTTCCC+CGG | - | chr7.4:15705238-15705257 | None:intergenic | 65.0% | |
| GGTTTCCCCCGATCTTGGCC+GGG | + | chr7.4:15705513-15705532 | MS.gene04607:CDS | 65.0% | |
| GTTTCCCCCGATCTTGGCCG+GGG | + | chr7.4:15705514-15705533 | MS.gene04607:CDS | 65.0% | |
| TCGGGAGGATGTCTGGCACC+AGG | - | chr7.4:15705304-15705323 | None:intergenic | 65.0% | |
| TGTGACCCCGGCCAAGATCG+GGG | - | chr7.4:15705522-15705541 | None:intergenic | 65.0% | |
| ! | TGGTGCCAGACATCCTCCCG+AGG | + | chr7.4:15705303-15705322 | MS.gene04607:CDS | 65.0% |
| !! | CAATCGGTTGGCCTTGGCCG+GGG | + | chr7.4:15705218-15705237 | MS.gene04607:CDS | 65.0% |
| !! | TTGGCCTTGGCCGGGGAACA+CGG | + | chr7.4:15705225-15705244 | MS.gene04607:CDS | 65.0% |
| GACTCCGTGTTCCCCGGCCA+AGG | - | chr7.4:15705232-15705251 | None:intergenic | 70.0% | |
| GTGACCCCGGCCAAGATCGG+GGG | - | chr7.4:15705521-15705540 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 15702310 | 15705660 | 15702310 | ID=MS.gene04607 |
| chr7.4 | mRNA | 15702310 | 15705660 | 15702310 | ID=MS.gene04607.t1;Parent=MS.gene04607 |
| chr7.4 | exon | 15702310 | 15702647 | 15702310 | ID=MS.gene04607.t1.exon1;Parent=MS.gene04607.t1 |
| chr7.4 | CDS | 15702310 | 15702647 | 15702310 | ID=cds.MS.gene04607.t1;Parent=MS.gene04607.t1 |
| chr7.4 | exon | 15704847 | 15704986 | 15704847 | ID=MS.gene04607.t1.exon2;Parent=MS.gene04607.t1 |
| chr7.4 | CDS | 15704847 | 15704986 | 15704847 | ID=cds.MS.gene04607.t1;Parent=MS.gene04607.t1 |
| chr7.4 | exon | 15705119 | 15705660 | 15705119 | ID=MS.gene04607.t1.exon3;Parent=MS.gene04607.t1 |
| chr7.4 | CDS | 15705119 | 15705660 | 15705119 | ID=cds.MS.gene04607.t1;Parent=MS.gene04607.t1 |
| Gene Sequence |
| Protein sequence |
