Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019036.t1 | XP_013459502.1 | 97 | 269 | 8 | 0 | 1 | 269 | 1 | 269 | 6.70E-149 | 536.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019036.t1 | J9U5U9 | 39.2 | 260 | 157 | 1 | 6 | 265 | 3 | 261 | 3.5e-61 | 236.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019036.t1 | A0A072UWT8 | 97.0 | 269 | 8 | 0 | 1 | 269 | 1 | 269 | 4.9e-149 | 536.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene019036 | MS.gene66455 | PPI |
| MS.gene019036 | MS.gene041911 | PPI |
| MS.gene24472 | MS.gene019036 | PPI |
| MS.gene00497 | MS.gene019036 | PPI |
| MS.gene019036 | MS.gene44503 | PPI |
| MS.gene011748 | MS.gene019036 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019036.t1 | MTR_3g045440 | 97.026 | 269 | 8 | 0 | 1 | 269 | 1 | 269 | 0.0 | 543 |
| MS.gene019036.t1 | MTR_6g086560 | 63.498 | 263 | 95 | 1 | 8 | 269 | 17 | 279 | 2.31e-125 | 358 |
| MS.gene019036.t1 | MTR_1g018320 | 38.077 | 260 | 159 | 2 | 7 | 265 | 5 | 263 | 3.78e-73 | 225 |
| MS.gene019036.t1 | MTR_4g095310 | 40.816 | 245 | 143 | 2 | 13 | 256 | 9 | 252 | 1.42e-70 | 218 |
| MS.gene019036.t1 | MTR_5g016150 | 38.776 | 245 | 148 | 2 | 13 | 256 | 9 | 252 | 7.29e-68 | 213 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019036.t1 | AT3G24420 | 50.185 | 271 | 132 | 2 | 1 | 268 | 1 | 271 | 3.00e-104 | 304 |
| MS.gene019036.t1 | AT3G03990 | 38.697 | 261 | 159 | 1 | 5 | 265 | 3 | 262 | 8.24e-76 | 231 |
| MS.gene019036.t1 | AT4G37470 | 42.041 | 245 | 140 | 2 | 13 | 256 | 9 | 252 | 1.99e-71 | 221 |
Find 53 sgRNAs with CRISPR-Local
Find 102 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTAATGCCCTATGCTTAT+TGG | 0.241237 | 3.2:-32292471 | None:intergenic |
| TGACATAAAACTATTGTTTC+GGG | 0.281340 | 3.2:-32291215 | None:intergenic |
| TACTTGGATGAGAACATTAA+AGG | 0.285814 | 3.2:+32292489 | MS.gene019036:CDS |
| ATGACATAAAACTATTGTTT+CGG | 0.322926 | 3.2:-32291216 | None:intergenic |
| TTGGAACAGACCAGTCTATA+TGG | 0.354404 | 3.2:+32291243 | MS.gene019036:CDS |
| TCAATAGAGTCAGCATCATT+TGG | 0.360021 | 3.2:-32292303 | None:intergenic |
| ACAGTCTAGTTCTGTTTGAT+TGG | 0.364702 | 3.2:+32291297 | MS.gene019036:CDS |
| TGATGAGTTAATCACTCTTA+TGG | 0.373825 | 3.2:+32291391 | MS.gene019036:CDS |
| TGAGGTGCTGAAGGGTATTG+TGG | 0.390938 | 3.2:+32292581 | MS.gene019036:CDS |
| AATAAGCATAGGGCATTACT+TGG | 0.397845 | 3.2:+32292473 | MS.gene019036:CDS |
| GCTTTCGTATTGAGACTCTA+TGG | 0.399369 | 3.2:-32292247 | None:intergenic |
| TCTGTAATAGCTCCAGAAAA+TGG | 0.417553 | 3.2:-32291320 | None:intergenic |
| TCATTTGGATCCACTGCAAT+AGG | 0.424577 | 3.2:-32292288 | None:intergenic |
| AAAAGCCTGAGCTCTTTAAG+AGG | 0.425563 | 3.2:+32291489 | MS.gene019036:CDS |
| TAGAGTCTCAATACGAAAGC+TGG | 0.436550 | 3.2:+32292250 | MS.gene019036:CDS |
| CTCATCAGCATAAGGTTCAT+AGG | 0.436848 | 3.2:-32291375 | None:intergenic |
| ACTTGGATGAGAACATTAAA+GGG | 0.437938 | 3.2:+32292490 | MS.gene019036:CDS |
| CTATAGAGATATAGTTGAAA+AGG | 0.445888 | 3.2:+32292401 | MS.gene019036:CDS |
| CATTAAAGGGATGTCTACTT+TGG | 0.446680 | 3.2:+32292503 | MS.gene019036:CDS |
| ATAAATACAGATGACTATAA+AGG | 0.458026 | 3.2:+32292186 | MS.gene019036:CDS |
| ACAATCCTCTTAAAGAGCTC+AGG | 0.466269 | 3.2:-32291494 | None:intergenic |
| TGTTTCGGGTCCTGAGCCTA+TGG | 0.470244 | 3.2:-32291201 | None:intergenic |
| CACTCTATGTCTGCTATGAT+AGG | 0.473029 | 3.2:+32291449 | MS.gene019036:CDS |
| TTCTTCTTTGTGCTTCCCCA+AGG | 0.483467 | 3.2:+32291516 | MS.gene019036:CDS |
| GTGATTAACTCATCAGCATA+AGG | 0.495421 | 3.2:-32291383 | None:intergenic |
| AATCACTCTTATGGATGAGT+TGG | 0.497837 | 3.2:+32291400 | MS.gene019036:CDS |
| CAACAAAAGTGATACATTTG+AGG | 0.498332 | 3.2:-32291424 | None:intergenic |
| CTCAGTTAACTGCACACCTA+AGG | 0.500170 | 3.2:+32292553 | MS.gene019036:CDS |
| GAGGTGCTGAAGGGTATTGT+GGG | 0.500980 | 3.2:+32292582 | MS.gene019036:CDS |
| GTGCAGTTAACTGAGGGAAA+TGG | 0.509673 | 3.2:-32292545 | None:intergenic |
| TCAGCACCTCAACCAACCTT+AGG | 0.510018 | 3.2:-32292569 | None:intergenic |
| TTGGAGTTTATAGATATGAC+TGG | 0.515619 | 3.2:+32292522 | MS.gene019036:CDS |
| AAGGTTGGTTGAGGTGCTGA+AGG | 0.529671 | 3.2:+32292572 | MS.gene019036:CDS |
| AATGCAAGAACCATAGGCTC+AGG | 0.553052 | 3.2:+32291191 | MS.gene019036:CDS |
| GAAAGCTGGGTTTCAGCATA+CGG | 0.556562 | 3.2:+32292264 | MS.gene019036:CDS |
| TCTTTAAATGCAAGAACCAT+AGG | 0.556752 | 3.2:+32291185 | MS.gene019036:CDS |
| GTGGCAGTTCCAATAAGCAT+AGG | 0.560917 | 3.2:+32292462 | MS.gene019036:CDS |
| ACTTGACTGAATGATTGTGC+AGG | 0.563263 | 3.2:-32292433 | None:intergenic |
| AGCATACGGTCCTATTGCAG+TGG | 0.564652 | 3.2:+32292278 | MS.gene019036:CDS |
| TTGCATTTAAAGATGTTGAG+AGG | 0.576785 | 3.2:-32291175 | None:intergenic |
| AGAGTCTCAATACGAAAGCT+GGG | 0.578249 | 3.2:+32292251 | MS.gene019036:CDS |
| TGCACACCTAAGGTTGGTTG+AGG | 0.583937 | 3.2:+32292563 | MS.gene019036:CDS |
| TGGCAGTTCCAATAAGCATA+GGG | 0.586920 | 3.2:+32292463 | MS.gene019036:CDS |
| GTTAACTGCACACCTAAGGT+TGG | 0.590880 | 3.2:+32292557 | MS.gene019036:CDS |
| CTTGACTGAATGATTGTGCA+GGG | 0.604202 | 3.2:-32292432 | None:intergenic |
| AATACAGATGACTATAAAGG+AGG | 0.635005 | 3.2:+32292189 | MS.gene019036:CDS |
| CATTCAGTCAAGTAATGATG+TGG | 0.635222 | 3.2:+32292443 | MS.gene019036:CDS |
| TGGTGAAGTTGCAATTACCT+TGG | 0.640152 | 3.2:+32292356 | MS.gene019036:CDS |
| CTTAGGTGTGCAGTTAACTG+AGG | 0.642434 | 3.2:-32292552 | None:intergenic |
| AGGTTGGTTGAGGTGCTGAA+GGG | 0.645453 | 3.2:+32292573 | MS.gene019036:CDS |
| TTAGGTGTGCAGTTAACTGA+GGG | 0.650507 | 3.2:-32292551 | None:intergenic |
| AAATGCTTGAAAAGAATGGG+TGG | 0.686067 | 3.2:+32292336 | MS.gene019036:CDS |
| TTGACTGAATGATTGTGCAG+GGG | 0.705699 | 3.2:-32292431 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAACTTTTTAACTATGTTAT+TGG | + | chr3.2:32291891-32291910 | MS.gene019036:intron | 15.0% |
| !!! | TATATTTTGCATGATTATAA+AGG | - | chr3.2:32291352-32291371 | None:intergenic | 15.0% |
| !! | AATTAGTTATTGACAAAACT+CGG | - | chr3.2:32291930-32291949 | None:intergenic | 20.0% |
| !! | ACCTATGAATGAATAATTAT+GGG | - | chr3.2:32292164-32292183 | None:intergenic | 20.0% |
| !! | ATAAATACAGATGACTATAA+AGG | + | chr3.2:32292186-32292205 | MS.gene019036:CDS | 20.0% |
| !! | ATGACATAAAACTATTGTTT+CGG | - | chr3.2:32291219-32291238 | None:intergenic | 20.0% |
| !! | TACCTATGAATGAATAATTA+TGG | - | chr3.2:32292165-32292184 | None:intergenic | 20.0% |
| !!! | AAACAATAGTTTTATGTCAT+GGG | + | chr3.2:32291219-32291238 | MS.gene019036:CDS | 20.0% |
| ! | ATTAGTTATTGACAAAACTC+GGG | - | chr3.2:32291929-32291948 | None:intergenic | 25.0% |
| ! | CAAAAATGCTTGAAAAGAAT+GGG | + | chr3.2:32292333-32292352 | MS.gene019036:CDS | 25.0% |
| ! | CTATAGAGATATAGTTGAAA+AGG | + | chr3.2:32292401-32292420 | MS.gene019036:CDS | 25.0% |
| ! | GAAATCTCATATTGTGTATT+TGG | + | chr3.2:32291664-32291683 | MS.gene019036:intron | 25.0% |
| ! | TCAAAAATGCTTGAAAAGAA+TGG | + | chr3.2:32292332-32292351 | MS.gene019036:CDS | 25.0% |
| ! | TCCCATAATTATTCATTCAT+AGG | + | chr3.2:32292160-32292179 | MS.gene019036:intron | 25.0% |
| ! | TGACATAAAACTATTGTTTC+GGG | - | chr3.2:32291218-32291237 | None:intergenic | 25.0% |
| ! | TGTTAAAACGCTTGATTATT+TGG | + | chr3.2:32291640-32291659 | MS.gene019036:intron | 25.0% |
| !! | AAACATTTGATGGTACAATA+TGG | + | chr3.2:32292110-32292129 | MS.gene019036:intron | 25.0% |
| !! | AACATTTGATGGTACAATAT+GGG | + | chr3.2:32292111-32292130 | MS.gene019036:intron | 25.0% |
| !! | CAATTTTATTCCATATAGAC+TGG | - | chr3.2:32291256-32291275 | None:intergenic | 25.0% |
| !! | CTGTAATTTTCAGTTAAAAG+AGG | - | chr3.2:32291281-32291300 | None:intergenic | 25.0% |
| !!! | GAAACAATAGTTTTATGTCA+TGG | + | chr3.2:32291218-32291237 | MS.gene019036:CDS | 25.0% |
| AATACAGATGACTATAAAGG+AGG | + | chr3.2:32292189-32292208 | MS.gene019036:CDS | 30.0% | |
| ACTTGGATGAGAACATTAAA+GGG | + | chr3.2:32292490-32292509 | MS.gene019036:CDS | 30.0% | |
| CAACAAAAGTGATACATTTG+AGG | - | chr3.2:32291427-32291446 | None:intergenic | 30.0% | |
| GTACCATCAAATGTTTGAAT+TGG | - | chr3.2:32292106-32292125 | None:intergenic | 30.0% | |
| TACTTGGATGAGAACATTAA+AGG | + | chr3.2:32292489-32292508 | MS.gene019036:CDS | 30.0% | |
| TCTTTAAATGCAAGAACCAT+AGG | + | chr3.2:32291185-32291204 | MS.gene019036:CDS | 30.0% | |
| TGATGAGTTAATCACTCTTA+TGG | + | chr3.2:32291391-32291410 | MS.gene019036:CDS | 30.0% | |
| TTAGTTATTGACAAAACTCG+GGG | - | chr3.2:32291928-32291947 | None:intergenic | 30.0% | |
| TTGCATTTAAAGATGTTGAG+AGG | - | chr3.2:32291178-32291197 | None:intergenic | 30.0% | |
| TTGGAGTTTATAGATATGAC+TGG | + | chr3.2:32292522-32292541 | MS.gene019036:CDS | 30.0% | |
| ! | TTTTGTGGAAGGACAAAAAT+AGG | - | chr3.2:32292037-32292056 | None:intergenic | 30.0% |
| !! | CTCAAATGTATCACTTTTGT+TGG | + | chr3.2:32291425-32291444 | MS.gene019036:CDS | 30.0% |
| !!! | ATAGTTTTATGTCATGGGTT+TGG | + | chr3.2:32291224-32291243 | MS.gene019036:CDS | 30.0% |
| !!! | GTTTAGCATTTCTAGTTTTG+TGG | - | chr3.2:32292052-32292071 | None:intergenic | 30.0% |
| AAATGCTTGAAAAGAATGGG+TGG | + | chr3.2:32292336-32292355 | MS.gene019036:CDS | 35.0% | |
| AAGTAATGCCCTATGCTTAT+TGG | - | chr3.2:32292474-32292493 | None:intergenic | 35.0% | |
| AATCACTCTTATGGATGAGT+TGG | + | chr3.2:32291400-32291419 | MS.gene019036:CDS | 35.0% | |
| AGGCCAATTCAAACATTTGA+TGG | + | chr3.2:32292100-32292119 | MS.gene019036:intron | 35.0% | |
| CATTAAAGGGATGTCTACTT+TGG | + | chr3.2:32292503-32292522 | MS.gene019036:CDS | 35.0% | |
| CATTCAGTCAAGTAATGATG+TGG | + | chr3.2:32292443-32292462 | MS.gene019036:CDS | 35.0% | |
| GAAAAACATAGATGTGAGAG+AGG | - | chr3.2:32291989-32292008 | None:intergenic | 35.0% | |
| GTGATTAACTCATCAGCATA+AGG | - | chr3.2:32291386-32291405 | None:intergenic | 35.0% | |
| TAGTTATTGACAAAACTCGG+GGG | - | chr3.2:32291927-32291946 | None:intergenic | 35.0% | |
| TCAATAGAGTCAGCATCATT+TGG | - | chr3.2:32292306-32292325 | None:intergenic | 35.0% | |
| TCTGTAATAGCTCCAGAAAA+TGG | - | chr3.2:32291323-32291342 | None:intergenic | 35.0% | |
| ! | AAAGAGCTCAGGCTTTTTAA+TGG | - | chr3.2:32291486-32291505 | None:intergenic | 35.0% |
| ! | AATAAGCATAGGGCATTACT+TGG | + | chr3.2:32292473-32292492 | MS.gene019036:CDS | 35.0% |
| ! | ACATCAGAGAGAGTATATGT+AGG | - | chr3.2:32291556-32291575 | None:intergenic | 35.0% |
| ! | ATTTGATGGTACAATATGGG+TGG | + | chr3.2:32292114-32292133 | MS.gene019036:intron | 35.0% |
| ! | GTCACTGAAAAACACAGTTT+TGG | - | chr3.2:32292382-32292401 | None:intergenic | 35.0% |
| ! | TCAAATGTTTGAATTGGCCT+AGG | - | chr3.2:32292100-32292119 | None:intergenic | 35.0% |
| !! | ACAGTCTAGTTCTGTTTGAT+TGG | + | chr3.2:32291297-32291316 | MS.gene019036:CDS | 35.0% |
| !!! | AGCATTTCTAGTTTTGTGGA+AGG | - | chr3.2:32292048-32292067 | None:intergenic | 35.0% |
| !!! | TCACTTTTTTTTCCTAGCCT+AGG | + | chr3.2:32292080-32292099 | MS.gene019036:intron | 35.0% |
| AAAAGCCTGAGCTCTTTAAG+AGG | + | chr3.2:32291489-32291508 | MS.gene019036:CDS | 40.0% | |
| ACAATCCTCTTAAAGAGCTC+AGG | - | chr3.2:32291497-32291516 | None:intergenic | 40.0% | |
| ACTTGACTGAATGATTGTGC+AGG | - | chr3.2:32292436-32292455 | None:intergenic | 40.0% | |
| AGAGTCTCAATACGAAAGCT+GGG | + | chr3.2:32292251-32292270 | MS.gene019036:CDS | 40.0% | |
| CACTCTATGTCTGCTATGAT+AGG | + | chr3.2:32291449-32291468 | MS.gene019036:CDS | 40.0% | |
| CATGTGTTACCGACATATGT+CGG | + | chr3.2:32291795-32291814 | MS.gene019036:intron | 40.0% | |
| CTCATCAGCATAAGGTTCAT+AGG | - | chr3.2:32291378-32291397 | None:intergenic | 40.0% | |
| CTTGACTGAATGATTGTGCA+GGG | - | chr3.2:32292435-32292454 | None:intergenic | 40.0% | |
| GCTTTCGTATTGAGACTCTA+TGG | - | chr3.2:32292250-32292269 | None:intergenic | 40.0% | |
| GTGCACTTCTTTATGTGTTG+TGG | - | chr3.2:32292015-32292034 | None:intergenic | 40.0% | |
| TAGAGTCTCAATACGAAAGC+TGG | + | chr3.2:32292250-32292269 | MS.gene019036:CDS | 40.0% | |
| TAGTGTCAACGTGTTAGTGA+CGG | - | chr3.2:32291732-32291751 | None:intergenic | 40.0% | |
| TCATTTGGATCCACTGCAAT+AGG | - | chr3.2:32292291-32292310 | None:intergenic | 40.0% | |
| TGGCAGTTCCAATAAGCATA+GGG | + | chr3.2:32292463-32292482 | MS.gene019036:CDS | 40.0% | |
| TGGTGAAGTTGCAATTACCT+TGG | + | chr3.2:32292356-32292375 | MS.gene019036:CDS | 40.0% | |
| TTAGGTGTGCAGTTAACTGA+GGG | - | chr3.2:32292554-32292573 | None:intergenic | 40.0% | |
| TTGACTGAATGATTGTGCAG+GGG | - | chr3.2:32292434-32292453 | None:intergenic | 40.0% | |
| TTGGAACAGACCAGTCTATA+TGG | + | chr3.2:32291243-32291262 | MS.gene019036:CDS | 40.0% | |
| ! | GAGAGAGGCTACTTTAAAGA+TGG | - | chr3.2:32291974-32291993 | None:intergenic | 40.0% |
| !! | AGGTAAAGATGAGAGTACCT+TGG | - | chr3.2:32291536-32291555 | None:intergenic | 40.0% |
| !! | CTGTTTGATTGGCCATTTTC+TGG | + | chr3.2:32291308-32291327 | MS.gene019036:CDS | 40.0% |
| !! | GAAAAACACAGTTTTGGCCA+AGG | - | chr3.2:32292376-32292395 | None:intergenic | 40.0% |
| !! | GGTAAAGATGAGAGTACCTT+GGG | - | chr3.2:32291535-32291554 | None:intergenic | 40.0% |
| !! | GTAAAGATGAGAGTACCTTG+GGG | - | chr3.2:32291534-32291553 | None:intergenic | 40.0% |
| !!! | GATGTTGAGAGGCTCTTTTT+TGG | - | chr3.2:32291167-32291186 | None:intergenic | 40.0% |
| AATGCAAGAACCATAGGCTC+AGG | + | chr3.2:32291191-32291210 | MS.gene019036:CDS | 45.0% | |
| CTCAGTTAACTGCACACCTA+AGG | + | chr3.2:32292553-32292572 | MS.gene019036:CDS | 45.0% | |
| CTTAGGTGTGCAGTTAACTG+AGG | - | chr3.2:32292555-32292574 | None:intergenic | 45.0% | |
| GAAAGCTGGGTTTCAGCATA+CGG | + | chr3.2:32292264-32292283 | MS.gene019036:CDS | 45.0% | |
| GTCTGATGTCCGACATATGT+CGG | - | chr3.2:32291807-32291826 | None:intergenic | 45.0% | |
| GTGCAGTTAACTGAGGGAAA+TGG | - | chr3.2:32292548-32292567 | None:intergenic | 45.0% | |
| GTGGCAGTTCCAATAAGCAT+AGG | + | chr3.2:32292462-32292481 | MS.gene019036:CDS | 45.0% | |
| GTTAACTGCACACCTAAGGT+TGG | + | chr3.2:32292557-32292576 | MS.gene019036:CDS | 45.0% | |
| TTCTTCTTTGTGCTTCCCCA+AGG | + | chr3.2:32291516-32291535 | MS.gene019036:CDS | 45.0% | |
| ! | ACGCTTTCCATCAGAAGTGT+CGG | + | chr3.2:32291827-32291846 | MS.gene019036:intron | 45.0% |
| ! | GAGCTCAGGCTTTTTAATGG+AGG | - | chr3.2:32291483-32291502 | None:intergenic | 45.0% |
| ! | TGTTTGAATTGGCCTAGGCT+AGG | - | chr3.2:32292095-32292114 | None:intergenic | 45.0% |
| !! | GTGTCGGTGCTACAAAGATT+TGG | + | chr3.2:32291843-32291862 | MS.gene019036:intron | 45.0% |
| AGCATACGGTCCTATTGCAG+TGG | + | chr3.2:32292278-32292297 | MS.gene019036:CDS | 50.0% | |
| TCAGCACCTCAACCAACCTT+AGG | - | chr3.2:32292572-32292591 | None:intergenic | 50.0% | |
| ! | TGCACACCTAAGGTTGGTTG+AGG | + | chr3.2:32292563-32292582 | MS.gene019036:CDS | 50.0% |
| !! | AAGGTTGGTTGAGGTGCTGA+AGG | + | chr3.2:32292572-32292591 | MS.gene019036:CDS | 50.0% |
| !! | AGGTTGGTTGAGGTGCTGAA+GGG | + | chr3.2:32292573-32292592 | MS.gene019036:CDS | 50.0% |
| !! | GAGGTGCTGAAGGGTATTGT+GGG | + | chr3.2:32292582-32292601 | MS.gene019036:CDS | 50.0% |
| !! | TGAGGTGCTGAAGGGTATTG+TGG | + | chr3.2:32292581-32292600 | MS.gene019036:CDS | 50.0% |
| !! | TGTAGCACCGACACTTCTGA+TGG | - | chr3.2:32291837-32291856 | None:intergenic | 50.0% |
| ! | TGTTTCGGGTCCTGAGCCTA+TGG | - | chr3.2:32291204-32291223 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 32291155 | 32292608 | 32291155 | ID=MS.gene019036 |
| chr3.2 | mRNA | 32291155 | 32292608 | 32291155 | ID=MS.gene019036.t1;Parent=MS.gene019036 |
| chr3.2 | exon | 32291155 | 32291537 | 32291155 | ID=MS.gene019036.t1.exon1;Parent=MS.gene019036.t1 |
| chr3.2 | CDS | 32291155 | 32291537 | 32291155 | ID=cds.MS.gene019036.t1;Parent=MS.gene019036.t1 |
| chr3.2 | exon | 32292182 | 32292608 | 32292182 | ID=MS.gene019036.t1.exon2;Parent=MS.gene019036.t1 |
| chr3.2 | CDS | 32292182 | 32292608 | 32292182 | ID=cds.MS.gene019036.t1;Parent=MS.gene019036.t1 |
| Gene Sequence |
| Protein sequence |
