Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019123.t1 | XP_013459242.1 | 98.9 | 720 | 8 | 0 | 1 | 720 | 1 | 720 | 4.10E-300 | 1040.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019123.t1 | Q08C72 | 60.9 | 530 | 201 | 1 | 197 | 720 | 220 | 749 | 8.1e-172 | 605.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019123.t1 | A0A072UW40 | 98.9 | 720 | 8 | 0 | 1 | 720 | 1 | 720 | 3.0e-300 | 1040.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene019123 | MS.gene040615 | PPI |
| MS.gene047509 | MS.gene019123 | PPI |
| MS.gene063407 | MS.gene019123 | PPI |
| MS.gene53517 | MS.gene019123 | PPI |
| MS.gene039147 | MS.gene019123 | PPI |
| MS.gene019123 | MS.gene053443 | PPI |
| MS.gene01351 | MS.gene019123 | PPI |
| MS.gene002376 | MS.gene019123 | PPI |
| MS.gene019123 | MS.gene073888 | PPI |
| MS.gene022597 | MS.gene019123 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019123.t1 | MTR_3g434840 | 98.695 | 766 | 10 | 0 | 1 | 766 | 1 | 766 | 0.0 | 1538 |
| MS.gene019123.t1 | MTR_7g093510 | 71.946 | 442 | 116 | 5 | 277 | 715 | 1 | 437 | 0.0 | 656 |
| MS.gene019123.t1 | MTR_7g093340 | 75.115 | 217 | 53 | 1 | 500 | 715 | 7 | 223 | 1.86e-116 | 351 |
| MS.gene019123.t1 | MTR_5g034040 | 62.667 | 75 | 4 | 2 | 529 | 603 | 1 | 51 | 2.84e-21 | 90.5 |
| MS.gene019123.t1 | MTR_7g086290 | 26.946 | 167 | 120 | 2 | 493 | 658 | 444 | 609 | 2.85e-15 | 80.5 |
| MS.gene019123.t1 | MTR_7g086290 | 29.496 | 139 | 97 | 1 | 521 | 658 | 586 | 724 | 2.94e-15 | 80.5 |
| MS.gene019123.t1 | MTR_7g086290 | 29.496 | 139 | 97 | 1 | 521 | 658 | 587 | 725 | 2.96e-15 | 80.5 |
| MS.gene019123.t1 | MTR_5g096330 | 43.878 | 98 | 35 | 3 | 457 | 554 | 16 | 93 | 4.71e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene019123.t1 | AT1G80930 | 71.875 | 704 | 166 | 11 | 36 | 727 | 174 | 857 | 0.0 | 977 |
| MS.gene019123.t1 | AT1G52325 | 59.756 | 82 | 33 | 0 | 631 | 712 | 39 | 120 | 1.04e-25 | 103 |
| MS.gene019123.t1 | AT1G52325 | 72.727 | 44 | 12 | 0 | 529 | 572 | 1 | 44 | 9.89e-16 | 75.5 |
| MS.gene019123.t1 | AT5G17930 | 21.850 | 508 | 313 | 14 | 233 | 713 | 301 | 751 | 1.66e-17 | 87.8 |
Find 184 sgRNAs with CRISPR-Local
Find 448 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTGACTTGGGATGCTTTA+AGG | 0.176862 | 3.3:+35378893 | MS.gene019123:CDS |
| CATAAGAAAGGCAAAGTTTC+AGG | 0.186876 | 3.3:+35380589 | MS.gene019123:CDS |
| CTTCACCACCACGATGTTTC+CGG | 0.221761 | 3.3:-35378318 | None:intergenic |
| CTCAGATATTACGGTCTTCT+AGG | 0.222902 | 3.3:+35381579 | MS.gene019123:CDS |
| CTGAAACTTTGCCTTTCTTA+TGG | 0.257364 | 3.3:-35380588 | None:intergenic |
| AGGAAGAAGTTGATCGAAAA+AGG | 0.273803 | 3.3:+35378347 | MS.gene019123:CDS |
| ATTTATTAAGATTCTCTTCC+AGG | 0.277884 | 3.3:+35381812 | MS.gene019123:CDS |
| GGATAACCGTCGAAGGTATA+AGG | 0.286872 | 3.3:+35378387 | MS.gene019123:CDS |
| GCTTTAAGGAAGAGTATTAA+TGG | 0.296789 | 3.3:+35378907 | MS.gene019123:CDS |
| AGATCGGCGTCGTCGATATA+AGG | 0.303241 | 3.3:+35378507 | MS.gene019123:CDS |
| ATATGATAAGAAGAGGAATT+TGG | 0.304825 | 3.3:+35378546 | MS.gene019123:CDS |
| AACGTGATGTGAAGAGAATT+AGG | 0.329271 | 3.3:+35378425 | MS.gene019123:CDS |
| CGTGTTCAATTTCTAATTGA+AGG | 0.334557 | 3.3:+35380557 | MS.gene019123:CDS |
| AAAGGAGGCATAGAGTTGAT+AGG | 0.343956 | 3.3:+35378575 | MS.gene019123:CDS |
| AATGGCGATGCATCTAAGTT+AGG | 0.346040 | 3.3:+35378784 | MS.gene019123:CDS |
| CAAACCCGACCCCAATTATC+TGG | 0.347857 | 3.3:+35381139 | MS.gene019123:CDS |
| TATTAATGGATTGGTGAATA+AGG | 0.348278 | 3.3:+35378921 | MS.gene019123:CDS |
| CTCTCACCGAGAGGACTTCA+TGG | 0.369360 | 3.3:+35379445 | MS.gene019123:CDS |
| AAAGAAGGCATAGGGCTGAT+AGG | 0.374529 | 3.3:+35378455 | MS.gene019123:CDS |
| GATGGCGTCACCCGGGTTTA+CGG | 0.376345 | 3.3:+35379041 | MS.gene019123:CDS |
| TTCACATCCATTGGTCTTGG+TGG | 0.379622 | 3.3:+35383820 | MS.gene019123:CDS |
| AAGAAGAAAGAGGAAGGAAG+TGG | 0.385688 | 3.3:+35378727 | MS.gene019123:CDS |
| ATACCGGCAAGTGTGATAAA+TGG | 0.389347 | 3.3:+35378766 | MS.gene019123:CDS |
| ATCATCCTCGCTAACTTAAA+CGG | 0.399524 | 3.3:-35378832 | None:intergenic |
| GGCATAGGGCTGATAGGGTT+AGG | 0.401872 | 3.3:+35378461 | MS.gene019123:CDS |
| GACGAACTGCCCTTCTTCCT+CGG | 0.406324 | 3.3:-35378242 | None:intergenic |
| GAGAATTTGATTCGTGGAAG+AGG | 0.407751 | 3.3:+35378988 | MS.gene019123:CDS |
| AGAAGGACAGGAAGAGAGAA+AGG | 0.408044 | 3.3:+35378617 | MS.gene019123:CDS |
| TCGCCATTTATCACACTTGC+CGG | 0.408536 | 3.3:-35378769 | None:intergenic |
| AAGCTCCGATTCATCAGATT+CGG | 0.416241 | 3.3:+35383942 | MS.gene019123:CDS |
| TTAACCTCTCATTTAGCAAC+CGG | 0.416989 | 3.3:-35383717 | None:intergenic |
| TGTTGTTGCATGATCATCCT+TGG | 0.421914 | 3.3:-35383880 | None:intergenic |
| TACAGGGTTATCCAGCTGTT+CGG | 0.427354 | 3.3:+35380921 | MS.gene019123:intron |
| ACGTGATGTGAAGAGAATTA+GGG | 0.427846 | 3.3:+35378426 | MS.gene019123:CDS |
| AGAACTTATCTCAGATATTA+CGG | 0.428108 | 3.3:+35381570 | MS.gene019123:CDS |
| AAGGAAGAGTATTAATGGAT+TGG | 0.432567 | 3.3:+35378912 | MS.gene019123:CDS |
| AGGATTATTTGCCATAAGAA+AGG | 0.434562 | 3.3:+35380577 | MS.gene019123:CDS |
| TAATATTACGAATATAATTC+CGG | 0.435178 | 3.3:+35378954 | MS.gene019123:CDS |
| TCGTGGTGGTGAAGATTTAG+AGG | 0.435202 | 3.3:+35378327 | MS.gene019123:CDS |
| ATAGGAGGAATGGGGAGAGA+AGG | 0.436272 | 3.3:+35378659 | MS.gene019123:CDS |
| TAGGAGGAATGGGGAGAGAA+GGG | 0.439511 | 3.3:+35378660 | MS.gene019123:CDS |
| GGAAGGCTCGGATGCTGAAT+CGG | 0.445016 | 3.3:+35381229 | MS.gene019123:CDS |
| TCAAGTTCAGGCCGAACAGC+TGG | 0.448583 | 3.3:-35380932 | None:intergenic |
| AGCTCCGATTCATCAGATTC+GGG | 0.454738 | 3.3:+35383943 | MS.gene019123:CDS |
| AGCAAATACATCCGTAAACC+CGG | 0.455143 | 3.3:-35379052 | None:intergenic |
| AGCTTCCTCATTCTCTTCAT+CGG | 0.455297 | 3.3:-35381267 | None:intergenic |
| GGAAGAGGAATCAGAGGGAG+AGG | 0.455771 | 3.3:+35381208 | MS.gene019123:CDS |
| ATGTGAAGAGAATTAGGGAT+AGG | 0.462288 | 3.3:+35378431 | MS.gene019123:CDS |
| TGCTCCACGAGGTCAAGTTC+AGG | 0.464216 | 3.3:-35380944 | None:intergenic |
| TGTGAAGTTTGTAGCACATC+TGG | 0.464680 | 3.3:+35379294 | MS.gene019123:CDS |
| ATGACGATGATAGGAGGAAT+GGG | 0.465728 | 3.3:+35378650 | MS.gene019123:CDS |
| ATGGCGATGCATCTAAGTTA+GGG | 0.468521 | 3.3:+35378785 | MS.gene019123:CDS |
| TTCTCCAGATAATTGGGGTC+GGG | 0.471760 | 3.3:-35381143 | None:intergenic |
| TATAATTCCGGAGTTGTTTG+CGG | 0.475883 | 3.3:+35378966 | MS.gene019123:CDS |
| AACACGAAGTTTCCTCAAGT+TGG | 0.480942 | 3.3:+35379093 | MS.gene019123:CDS |
| GAAAGTAAGAAGAAAGAGGA+AGG | 0.481288 | 3.3:+35378721 | MS.gene019123:CDS |
| TGAACTTGACCTCGTGGAGC+AGG | 0.481515 | 3.3:+35380946 | MS.gene019123:CDS |
| GGTTCCCGAATCTGATGAAT+CGG | 0.481563 | 3.3:-35383947 | None:intergenic |
| AAGGAGGCATAGAGTTGATA+GGG | 0.482275 | 3.3:+35378576 | MS.gene019123:CDS |
| GAGAGCGAGGACGGTGATAC+CGG | 0.485924 | 3.3:+35378750 | MS.gene019123:CDS |
| GATAACCGTCGAAGGTATAA+GGG | 0.486725 | 3.3:+35378388 | MS.gene019123:CDS |
| CGGAGTATCAGAGGTTGACT+TGG | 0.488147 | 3.3:+35378881 | MS.gene019123:CDS |
| ACTTGACTCTGACTCAGAAC+TGG | 0.488401 | 3.3:-35383968 | None:intergenic |
| AAGCTTGCTGGGTGAGGAAG+AGG | 0.489089 | 3.3:+35381193 | MS.gene019123:CDS |
| GGAAGAAAGTAAGAAGAAAG+AGG | 0.490672 | 3.3:+35378717 | MS.gene019123:CDS |
| ATAAGAAGAGGAATTTGGAT+AGG | 0.490938 | 3.3:+35378551 | MS.gene019123:CDS |
| AGAAGAAAGAGGAAGGAAGT+GGG | 0.491186 | 3.3:+35378728 | MS.gene019123:CDS |
| ATCGACGCGATGACGATGAT+AGG | 0.494629 | 3.3:+35378641 | MS.gene019123:CDS |
| AAGTCGTGTCGTCCTCAGTC+AGG | 0.494714 | 3.3:-35381776 | None:intergenic |
| ATCTGAGATAAGTTCTCTCC+TGG | 0.500569 | 3.3:-35381563 | None:intergenic |
| CAGGAATTGTCAGAGCATCT+AGG | 0.500837 | 3.3:+35383691 | MS.gene019123:intron |
| CCTCTTGACCTGGCTCAAGA+TGG | 0.500906 | 3.3:-35381403 | None:intergenic |
| AAAGGAATAGGGATAGGGAT+AGG | 0.501070 | 3.3:+35378365 | MS.gene019123:CDS |
| CCTCATCCAAGGAGACTTCG+TGG | 0.501456 | 3.3:-35380982 | None:intergenic |
| GATAACCCACGAAGTCTCCT+TGG | 0.501647 | 3.3:+35380976 | MS.gene019123:CDS |
| AGTGAATCGTCCGAGGAAGA+AGG | 0.504113 | 3.3:+35378232 | MS.gene019123:CDS |
| TCAAAAGAATCCTGCATGGT+TGG | 0.504273 | 3.3:-35383745 | None:intergenic |
| TAGGGATAATGATAATGATA+AGG | 0.505045 | 3.3:+35378480 | MS.gene019123:CDS |
| TCAGATATTACGGTCTTCTA+GGG | 0.505318 | 3.3:+35381580 | MS.gene019123:CDS |
| TACGGATGTATTTGCTGCGA+TGG | 0.513062 | 3.3:+35379059 | MS.gene019123:CDS |
| ATTTATTTGTTTCGAGCCTG+TGG | 0.514254 | 3.3:-35381677 | None:intergenic |
| AGGGATAGAGTTGAAAAGAA+TGG | 0.514880 | 3.3:+35378679 | MS.gene019123:CDS |
| AGCAGTATTCATTGATCCAC+AGG | 0.516452 | 3.3:+35381661 | MS.gene019123:CDS |
| AAGAAGGCATAGGGCTGATA+GGG | 0.519755 | 3.3:+35378456 | MS.gene019123:CDS |
| ATCAGAGGGAGAGGAAGGCT+CGG | 0.519884 | 3.3:+35381217 | MS.gene019123:CDS |
| ATAATGATAATGAGAAGGAC+AGG | 0.525843 | 3.3:+35378605 | MS.gene019123:CDS |
| GATGACGATGATAGGAGGAA+TGG | 0.527318 | 3.3:+35378649 | MS.gene019123:CDS |
| TAAGTTAGCGAGGATGATGA+AGG | 0.527435 | 3.3:+35378837 | MS.gene019123:CDS |
| AAGTCACAGATGGCGTCACC+CGG | 0.527531 | 3.3:+35379033 | MS.gene019123:CDS |
| AACTCACCATGAAGTCCTCT+CGG | 0.527918 | 3.3:-35379451 | None:intergenic |
| AGGAAGTGGGAGAGCGAGGA+CGG | 0.530179 | 3.3:+35378741 | MS.gene019123:CDS |
| CAAGTCAACCTCTGATACTC+CGG | 0.530824 | 3.3:-35378880 | None:intergenic |
| GGGTGAGGAAGAGGAATCAG+AGG | 0.530871 | 3.3:+35381202 | MS.gene019123:CDS |
| GAGGAATCAGAGGGAGAGGA+AGG | 0.532139 | 3.3:+35381212 | MS.gene019123:CDS |
| CTAGAGATGGGTAGAGGCGA+AGG | 0.532669 | 3.3:+35378208 | None:intergenic |
| AGGAAGGAAGTGGGAGAGCG+AGG | 0.533639 | 3.3:+35378737 | MS.gene019123:CDS |
| AATGTACCAAGGGAAGTCTC+AGG | 0.534127 | 3.3:-35381013 | None:intergenic |
| GAATTAGGGATAGGGAAAGA+AGG | 0.534748 | 3.3:+35378440 | MS.gene019123:CDS |
| AGCCACTTCAACACTGTCAT+CGG | 0.534953 | 3.3:-35379383 | None:intergenic |
| AAGGAATAGGGATAGGGATA+GGG | 0.535428 | 3.3:+35378366 | MS.gene019123:CDS |
| GCATCTAAGTTAGGGAAAAG+TGG | 0.535960 | 3.3:+35378793 | MS.gene019123:CDS |
| ATTCTCCAGATAATTGGGGT+CGG | 0.536893 | 3.3:-35381144 | None:intergenic |
| AGAGGAATTTGGATAGGGAA+AGG | 0.536981 | 3.3:+35378557 | MS.gene019123:CDS |
| CTTCTTATCATATTCCTCAT+CGG | 0.539763 | 3.3:-35378536 | None:intergenic |
| TGTCAGAGCATCTAGGCATC+CGG | 0.540897 | 3.3:+35383698 | MS.gene019123:CDS |
| AGTTGACGATAAGAGTAGTC+CGG | 0.544129 | 3.3:+35378861 | MS.gene019123:CDS |
| AGAATTTGATTCGTGGAAGA+GGG | 0.547231 | 3.3:+35378989 | MS.gene019123:CDS |
| AACAAATAAATTGAGAAATG+TGG | 0.548686 | 3.3:+35381689 | MS.gene019123:CDS |
| TGTGAAGAGAATTAGGGATA+GGG | 0.548968 | 3.3:+35378432 | MS.gene019123:CDS |
| TTTCGTGGAATTCTGCATGA+AGG | 0.549789 | 3.3:+35380521 | MS.gene019123:CDS |
| AGAGTTGAAGAAAAGCTTGC+TGG | 0.550608 | 3.3:+35381181 | MS.gene019123:CDS |
| TAAGAAGAGGAATTTGGATA+GGG | 0.551290 | 3.3:+35378552 | MS.gene019123:CDS |
| GCATAGGGCTGATAGGGTTA+GGG | 0.554442 | 3.3:+35378462 | MS.gene019123:CDS |
| AGAATGTGGCTCAATGCTGC+AGG | 0.558595 | 3.3:+35379420 | MS.gene019123:CDS |
| TTCACAGCAGCAAGTAATTG+AGG | 0.561550 | 3.3:-35379277 | None:intergenic |
| ATCCTCGCTAACTTAAACGG+CGG | 0.561726 | 3.3:-35378829 | None:intergenic |
| AAATTCTCCGCAAACAACTC+CGG | 0.563195 | 3.3:-35378973 | None:intergenic |
| GAAGAAAAGCTTGCTGGGTG+AGG | 0.564485 | 3.3:+35381187 | MS.gene019123:CDS |
| GTTAAATGATCCAACCATGC+AGG | 0.568417 | 3.3:+35383735 | MS.gene019123:CDS |
| GACAGTGTTGAAGTGGCTGT+TGG | 0.568452 | 3.3:+35379388 | MS.gene019123:CDS |
| ATAGATCCTGAGACTTCCCT+TGG | 0.569265 | 3.3:+35381007 | MS.gene019123:CDS |
| GTGAATCGTCCGAGGAAGAA+GGG | 0.570148 | 3.3:+35378233 | MS.gene019123:CDS |
| TTTGCGGAGAATTTGATTCG+TGG | 0.570272 | 3.3:+35378982 | MS.gene019123:CDS |
| AGAGTAGTCCGGAGTATCAG+AGG | 0.573006 | 3.3:+35378872 | MS.gene019123:CDS |
| AGGATCTATTTCCTCATCCA+AGG | 0.574152 | 3.3:-35380993 | None:intergenic |
| TGAATCCGATGAAGAGAATG+AGG | 0.575070 | 3.3:+35381262 | MS.gene019123:CDS |
| CTCATCCAAGGAGACTTCGT+GGG | 0.575131 | 3.3:-35380981 | None:intergenic |
| GCTTCTCGAATGTTGCAGCC+AGG | 0.578281 | 3.3:+35381545 | MS.gene019123:CDS |
| ATGAGGAATATGATAAGAAG+AGG | 0.579090 | 3.3:+35378539 | MS.gene019123:CDS |
| CCACGAAGTCTCCTTGGATG+AGG | 0.579818 | 3.3:+35380982 | MS.gene019123:CDS |
| CAAACCCTAGAGATGGGTAG+AGG | 0.584530 | 3.3:+35378202 | None:intergenic |
| TGCTTCCTCAAAATCTACAC+TGG | 0.585227 | 3.3:-35381360 | None:intergenic |
| TCAATGCTTACCTCTTGACC+TGG | 0.586308 | 3.3:-35381413 | None:intergenic |
| AGACCGCCGTGGAGCTGACG+TGG | 0.587724 | 3.3:+35378285 | MS.gene019123:CDS |
| ATAATGATAAGGAGAGAGAT+CGG | 0.588409 | 3.3:+35378491 | MS.gene019123:CDS |
| AAGAACCCTTATACCTTCGA+CGG | 0.588825 | 3.3:-35378393 | None:intergenic |
| CCATCTTGAGCCAGGTCAAG+AGG | 0.591466 | 3.3:+35381403 | MS.gene019123:CDS |
| TTTCATTCTCCAGATAATTG+GGG | 0.592695 | 3.3:-35381148 | None:intergenic |
| GGAATTTGGATAGGGAAAGG+AGG | 0.593854 | 3.3:+35378560 | MS.gene019123:CDS |
| AGAATGGTGGTGATAATGAG+AGG | 0.595271 | 3.3:+35378695 | MS.gene019123:CDS |
| AGTAAGACCACCAAGACCAA+TGG | 0.596030 | 3.3:-35383827 | None:intergenic |
| ATATATGATAAGACGTGCCA+AGG | 0.604106 | 3.3:-35381750 | None:intergenic |
| TTCCGATGACAGTGTTGAAG+TGG | 0.604254 | 3.3:+35379381 | MS.gene019123:CDS |
| CTAAGTTAGGGAAAAGTGGA+GGG | 0.605295 | 3.3:+35378797 | MS.gene019123:CDS |
| GGATAGGGAAAGAAGGCATA+GGG | 0.605833 | 3.3:+35378447 | MS.gene019123:CDS |
| GATCCTCCACGTCAGCTCCA+CGG | 0.609053 | 3.3:-35378291 | None:intergenic |
| GGGATAGGGAAAGAAGGCAT+AGG | 0.609566 | 3.3:+35378446 | MS.gene019123:CDS |
| TGATGATAATGATAATGAGA+AGG | 0.610107 | 3.3:+35378600 | MS.gene019123:CDS |
| TTCCGCCGTTTAAGTTAGCG+AGG | 0.612275 | 3.3:+35378827 | MS.gene019123:CDS |
| ATCATATATTCGCCTGACTG+AGG | 0.612797 | 3.3:+35381764 | MS.gene019123:CDS |
| GACGCGATGACGATGATAGG+AGG | 0.612992 | 3.3:+35378644 | MS.gene019123:CDS |
| AGTAAAAGATCACCAACTTG+AGG | 0.613759 | 3.3:-35379105 | None:intergenic |
| GAAGGACAGGAAGAGAGAAA+GGG | 0.616059 | 3.3:+35378618 | MS.gene019123:CDS |
| TAAGTTAGGGAAAAGTGGAG+GGG | 0.620618 | 3.3:+35378798 | MS.gene019123:CDS |
| CTGACGTGGAGGATCTTCGC+CGG | 0.621555 | 3.3:+35378299 | MS.gene019123:CDS |
| AGCGTATAAGCGTAATGACA+AGG | 0.625593 | 3.3:+35379155 | MS.gene019123:CDS |
| GATAGAGTTGAAAAGAATGG+TGG | 0.626095 | 3.3:+35378682 | MS.gene019123:CDS |
| GAGTTGAAGAAAAGCTTGCT+GGG | 0.627690 | 3.3:+35381182 | MS.gene019123:CDS |
| TCTAAGTTAGGGAAAAGTGG+AGG | 0.631512 | 3.3:+35378796 | MS.gene019123:CDS |
| GGAGTATCAGAGGTTGACTT+GGG | 0.634579 | 3.3:+35378882 | MS.gene019123:CDS |
| GAAGAGAAGCGAGACCGCCG+TGG | 0.638989 | 3.3:+35378274 | MS.gene019123:CDS |
| GCAAGTTTCAGATTCTGACT+CGG | 0.639505 | 3.3:+35383906 | MS.gene019123:CDS |
| ACTTCAACACTGTCATCGGA+AGG | 0.639702 | 3.3:-35379379 | None:intergenic |
| TCGGCCTGAACTTGACCTCG+TGG | 0.644434 | 3.3:+35380940 | MS.gene019123:CDS |
| CTAATCTTGTCAATCTGCGG+CGG | 0.648589 | 3.3:+35381315 | MS.gene019123:CDS |
| CGAAGGAAGTGAATCGTCCG+AGG | 0.649193 | 3.3:+35378225 | MS.gene019123:CDS |
| ATCGTGTATGAAGTCACAGA+TGG | 0.650101 | 3.3:+35379023 | MS.gene019123:CDS |
| GAATGGTGGTGATAATGAGA+GGG | 0.653081 | 3.3:+35378696 | MS.gene019123:CDS |
| GGTGAGGAAGAGGAATCAGA+GGG | 0.656246 | 3.3:+35381203 | MS.gene019123:CDS |
| AGACTAATCTTGTCAATCTG+CGG | 0.657517 | 3.3:+35381312 | MS.gene019123:CDS |
| GCAAATACATCCGTAAACCC+GGG | 0.659500 | 3.3:-35379051 | None:intergenic |
| AGTCACAGATGGCGTCACCC+GGG | 0.663171 | 3.3:+35379034 | MS.gene019123:CDS |
| GGGATAGGGATAACCGTCGA+AGG | 0.665076 | 3.3:+35378380 | MS.gene019123:CDS |
| CCGCCGTGGAGCTGACGTGG+AGG | 0.669781 | 3.3:+35378288 | MS.gene019123:CDS |
| GGATTCAAAAGAATCCTGCA+TGG | 0.674975 | 3.3:-35383749 | None:intergenic |
| TGACGATGATAGGAGGAATG+GGG | 0.674999 | 3.3:+35378651 | MS.gene019123:CDS |
| GCATCCGGTTGCTAAATGAG+AGG | 0.690045 | 3.3:+35383713 | MS.gene019123:CDS |
| ATATAAGGATGATTCCGATG+AGG | 0.702072 | 3.3:+35378522 | MS.gene019123:CDS |
| CTGCAGGATCTCTCACCGAG+AGG | 0.706164 | 3.3:+35379436 | MS.gene019123:CDS |
| TCTGATCTTCCTGCTCCACG+AGG | 0.706624 | 3.3:-35380955 | None:intergenic |
| TATCGCGCTAGAGCTGCTCA+CGG | 0.717493 | 3.3:+35379342 | MS.gene019123:CDS |
| GATCTTCGCCGGAAACATCG+TGG | 0.723457 | 3.3:+35378310 | MS.gene019123:CDS |
| CTTCGCCGGAAACATCGTGG+TGG | 0.733681 | 3.3:+35378313 | MS.gene019123:CDS |
| CCTCCACGTCAGCTCCACGG+CGG | 0.748184 | 3.3:-35378288 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAATTATATTAACATG+TGG | + | chr3.3:35381062-35381081 | MS.gene019123:intron | 10.0% |
| !! | TAAAAATATACGATATAAAA+TGG | - | chr3.3:35383565-35383584 | None:intergenic | 10.0% |
| !!! | ATTTTAATAAAATTCTGTTT+TGG | - | chr3.3:35381490-35381509 | None:intergenic | 10.0% |
| !! | AATATAACCATATAGTTAAA+GGG | - | chr3.3:35379479-35379498 | None:intergenic | 15.0% |
| !! | AATCATAATAAAATTTCTCT+CGG | - | chr3.3:35382041-35382060 | None:intergenic | 15.0% |
| !! | ATATAAAATGGAAATATCTT+GGG | - | chr3.3:35383553-35383572 | None:intergenic | 15.0% |
| !! | ATTGCTTAAAATTTGATAAA+AGG | + | chr3.3:35381929-35381948 | MS.gene019123:intron | 15.0% |
| !! | TAATATTACGAATATAATTC+CGG | + | chr3.3:35378954-35378973 | MS.gene019123:CDS | 15.0% |
| !!! | AAAAGACATTTATTTTGAAA+TGG | - | chr3.3:35379745-35379764 | None:intergenic | 15.0% |
| !!! | AAATATTTTTCATGTTTTGA+TGG | - | chr3.3:35382605-35382624 | None:intergenic | 15.0% |
| !!! | ATATACAAGTTGTTTTATTA+TGG | + | chr3.3:35382668-35382687 | MS.gene019123:intron | 15.0% |
| !!! | TTCAAAATAAATGTCTTTTA+AGG | + | chr3.3:35379746-35379765 | MS.gene019123:intron | 15.0% |
| !!! | TTTATTATGATTTTTGACAA+AGG | + | chr3.3:35382049-35382068 | MS.gene019123:intron | 15.0% |
| !! | AACAAATAAATTGAGAAATG+TGG | + | chr3.3:35381689-35381708 | MS.gene019123:CDS | 20.0% |
| !! | ATCATAATAAAATTTCTCTC+GGG | - | chr3.3:35382040-35382059 | None:intergenic | 20.0% |
| !! | ATTTATATAATCTCTTGTGT+TGG | + | chr3.3:35380351-35380370 | MS.gene019123:intron | 20.0% |
| !! | CAATATAACCATATAGTTAA+AGG | - | chr3.3:35379480-35379499 | None:intergenic | 20.0% |
| !! | GATATAAAATGGAAATATCT+TGG | - | chr3.3:35383554-35383573 | None:intergenic | 20.0% |
| !! | TAAGAATCTGAACAAAATTT+AGG | + | chr3.3:35381955-35381974 | MS.gene019123:intron | 20.0% |
| !! | TCTACTAAAAAAAAAACTCA+TGG | - | chr3.3:35383237-35383256 | None:intergenic | 20.0% |
| !! | TGAAATGTTAAATAGAAAGA+TGG | - | chr3.3:35382387-35382406 | None:intergenic | 20.0% |
| !! | TTATGAATCATACTATTCTT+TGG | + | chr3.3:35379574-35379593 | MS.gene019123:intron | 20.0% |
| !! | TTGTAAAGAAGAGAATATTA+TGG | - | chr3.3:35382449-35382468 | None:intergenic | 20.0% |
| !!! | AAAGATAGGTAAATGATTTT+TGG | + | chr3.3:35379623-35379642 | MS.gene019123:intron | 20.0% |
| !!! | AGTTAGATTTATAATTTTGC+AGG | + | chr3.3:35380485-35380504 | MS.gene019123:intron | 20.0% |
| !!! | GAGAAATTTTAAAAAAGGAT+GGG | - | chr3.3:35383025-35383044 | None:intergenic | 20.0% |
| !!! | GAGTGTTACTTTATAATAAT+AGG | + | chr3.3:35380101-35380120 | MS.gene019123:intron | 20.0% |
| !!! | TACCTTAATTTTTGGTAATT+TGG | + | chr3.3:35380219-35380238 | MS.gene019123:intron | 20.0% |
| !!! | TCTTTTGTATGGTATTTTAA+AGG | + | chr3.3:35380855-35380874 | MS.gene019123:intron | 20.0% |
| !!! | TGAAGTAAAAGTAATGTTTT+GGG | + | chr3.3:35379873-35379892 | MS.gene019123:intron | 20.0% |
| !!! | TGAGAAATTTTAAAAAAGGA+TGG | - | chr3.3:35383026-35383045 | None:intergenic | 20.0% |
| !!! | TTTCCAATTTTACTTTTAGT+CGG | + | chr3.3:35379203-35379222 | MS.gene019123:intron | 20.0% |
| ! | AAAAATTCCAAAGAAAAGAG+AGG | + | chr3.3:35382078-35382097 | MS.gene019123:intron | 25.0% |
| ! | AAAACATGGTAAAGAAAGAT+AGG | + | chr3.3:35379609-35379628 | MS.gene019123:intron | 25.0% |
| ! | AAACCGACTAAAAGTAAAAT+TGG | - | chr3.3:35379209-35379228 | None:intergenic | 25.0% |
| ! | AAATGCAATGATTAGAAGAA+AGG | + | chr3.3:35379788-35379807 | MS.gene019123:intron | 25.0% |
| ! | AATGCAATGATTAGAAGAAA+GGG | + | chr3.3:35379789-35379808 | MS.gene019123:intron | 25.0% |
| ! | ACCAAATAAAAACAACAGTT+TGG | - | chr3.3:35381990-35382009 | None:intergenic | 25.0% |
| ! | AGAACTTATCTCAGATATTA+CGG | + | chr3.3:35381570-35381589 | MS.gene019123:CDS | 25.0% |
| ! | AGGTGTGATTAATATTTCAT+TGG | + | chr3.3:35379924-35379943 | MS.gene019123:intron | 25.0% |
| ! | AGTATTTGAAAAATATGCCA+AGG | + | chr3.3:35383863-35383882 | MS.gene019123:CDS | 25.0% |
| ! | ATAACATAATTTCATGCACA+TGG | - | chr3.3:35379715-35379734 | None:intergenic | 25.0% |
| ! | ATATGATAAGAAGAGGAATT+TGG | + | chr3.3:35378546-35378565 | MS.gene019123:CDS | 25.0% |
| ! | ATTTATTAAGATTCTCTTCC+AGG | + | chr3.3:35381812-35381831 | MS.gene019123:CDS | 25.0% |
| ! | CACCAAATTACCAAAAATTA+AGG | - | chr3.3:35380224-35380243 | None:intergenic | 25.0% |
| ! | CTATTACTGTTGTTAAGAAT+TGG | - | chr3.3:35382243-35382262 | None:intergenic | 25.0% |
| ! | GAAAATAGAAAATGTACCAA+GGG | - | chr3.3:35381026-35381045 | None:intergenic | 25.0% |
| ! | TAAAGAAACCAATAGTTGAT+GGG | - | chr3.3:35379838-35379857 | None:intergenic | 25.0% |
| ! | TAAAGAAGAGAATATTATGG+TGG | - | chr3.3:35382446-35382465 | None:intergenic | 25.0% |
| ! | TAACATAATTTCATGCACAT+GGG | - | chr3.3:35379714-35379733 | None:intergenic | 25.0% |
| ! | TGAAAATAGAAAATGTACCA+AGG | - | chr3.3:35381027-35381046 | None:intergenic | 25.0% |
| !! | AACTTCTGTACCTTAATTTT+TGG | + | chr3.3:35380211-35380230 | MS.gene019123:intron | 25.0% |
| !! | AAGCATAAGTGAAAAAGTAT+AGG | - | chr3.3:35382271-35382290 | None:intergenic | 25.0% |
| !! | AGGTACACTATTTTATTGTT+TGG | + | chr3.3:35380609-35380628 | MS.gene019123:intron | 25.0% |
| !! | GCATCTTAACAATTTTATTC+AGG | + | chr3.3:35383086-35383105 | MS.gene019123:intron | 25.0% |
| !! | GGTACACTATTTTATTGTTT+GGG | + | chr3.3:35380610-35380629 | MS.gene019123:intron | 25.0% |
| !! | GTACACTATTTTATTGTTTG+GGG | + | chr3.3:35380611-35380630 | MS.gene019123:intron | 25.0% |
| !! | GTGAAGTAAAAGTAATGTTT+TGG | + | chr3.3:35379872-35379891 | MS.gene019123:intron | 25.0% |
| !! | TAGGGATAATGATAATGATA+AGG | + | chr3.3:35378480-35378499 | MS.gene019123:CDS | 25.0% |
| !! | TGATGATAATGATAATGAGA+AGG | + | chr3.3:35378600-35378619 | MS.gene019123:CDS | 25.0% |
| !! | TTTTCATTCTCCAGATAATT+GGG | - | chr3.3:35381152-35381171 | None:intergenic | 25.0% |
| !!! | AAATTTTTTGCTCATTTGCT+CGG | + | chr3.3:35381714-35381733 | MS.gene019123:CDS | 25.0% |
| !!! | AGACATTTATTTTGAAATGG+AGG | - | chr3.3:35379742-35379761 | None:intergenic | 25.0% |
| !!! | ATCAATTTTTTCACATCCAT+TGG | + | chr3.3:35383811-35383830 | MS.gene019123:CDS | 25.0% |
| !!! | CTTTTAGTCGGTTTTTAATT+TGG | + | chr3.3:35379215-35379234 | MS.gene019123:intron | 25.0% |
| !!! | GAATATGTGCTTTTAAAACT+TGG | - | chr3.3:35381906-35381925 | None:intergenic | 25.0% |
| !!! | GACATTTATTTTGAAATGGA+GGG | - | chr3.3:35379741-35379760 | None:intergenic | 25.0% |
| !!! | TATTAATGGATTGGTGAATA+AGG | + | chr3.3:35378921-35378940 | MS.gene019123:CDS | 25.0% |
| !!! | TATTTGGTTTTTTGTATGCT+AGG | + | chr3.3:35382002-35382021 | MS.gene019123:intron | 25.0% |
| !!! | TCCAAACTGTTGTTTTTATT+TGG | + | chr3.3:35381986-35382005 | MS.gene019123:intron | 25.0% |
| !!! | TGGGTGAGAAATTTTAAAAA+AGG | - | chr3.3:35383030-35383049 | None:intergenic | 25.0% |
| AAAATACTTCCTTGAGAGAT+GGG | - | chr3.3:35383049-35383068 | None:intergenic | 30.0% | |
| AAATTATCCCCATCAACTAT+TGG | + | chr3.3:35379827-35379846 | MS.gene019123:intron | 30.0% | |
| ACGGTATAGTTGTATACTAA+TGG | + | chr3.3:35382532-35382551 | MS.gene019123:intron | 30.0% | |
| AGGATTATTTGCCATAAGAA+AGG | + | chr3.3:35380577-35380596 | MS.gene019123:CDS | 30.0% | |
| AGTTGATCGAAAAAGGAATA+GGG | + | chr3.3:35378354-35378373 | MS.gene019123:CDS | 30.0% | |
| ATAAGAAGAGGAATTTGGAT+AGG | + | chr3.3:35378551-35378570 | MS.gene019123:CDS | 30.0% | |
| ATAATGATAAGGAGAGAGAT+CGG | + | chr3.3:35378491-35378510 | MS.gene019123:CDS | 30.0% | |
| ATGAGGAATATGATAAGAAG+AGG | + | chr3.3:35378539-35378558 | MS.gene019123:CDS | 30.0% | |
| ATGTTGCATGAATATATTGG+TGG | + | chr3.3:35383500-35383519 | MS.gene019123:intron | 30.0% | |
| ATTGAAAACTAGAGTAATGG+AGG | - | chr3.3:35382891-35382910 | None:intergenic | 30.0% | |
| CAAAATACAGACAAGAGAAA+GGG | - | chr3.3:35379540-35379559 | None:intergenic | 30.0% | |
| CATTGAGCTAACATTCTTAT+TGG | + | chr3.3:35382469-35382488 | MS.gene019123:intron | 30.0% | |
| CGTGTTCAATTTCTAATTGA+AGG | + | chr3.3:35380557-35380576 | MS.gene019123:CDS | 30.0% | |
| CTTCTTATCATATTCCTCAT+CGG | - | chr3.3:35378539-35378558 | None:intergenic | 30.0% | |
| GATAAAAGCAATAAAAACCC+AGG | - | chr3.3:35382331-35382350 | None:intergenic | 30.0% | |
| GTAAAGAAACCAATAGTTGA+TGG | - | chr3.3:35379839-35379858 | None:intergenic | 30.0% | |
| GTATGCATAAATTTGTACAG+AGG | - | chr3.3:35380381-35380400 | None:intergenic | 30.0% | |
| GTTATATCACTATTGCATAG+CGG | + | chr3.3:35380769-35380788 | MS.gene019123:intron | 30.0% | |
| TAAGAAGAGGAATTTGGATA+GGG | + | chr3.3:35378552-35378571 | MS.gene019123:CDS | 30.0% | |
| TATCATGACAACTGCAAAAA+TGG | - | chr3.3:35380293-35380312 | None:intergenic | 30.0% | |
| TCAAAATACAGACAAGAGAA+AGG | - | chr3.3:35379541-35379560 | None:intergenic | 30.0% | |
| TCTTAACAACAGTAATAGCT+TGG | + | chr3.3:35382245-35382264 | MS.gene019123:intron | 30.0% | |
| TGCATGTTGCATGAATATAT+TGG | + | chr3.3:35383497-35383516 | MS.gene019123:intron | 30.0% | |
| TGTTCTCTTATATCATGTGT+GGG | + | chr3.3:35383591-35383610 | MS.gene019123:intron | 30.0% | |
| TTCAAATCAAATGGACGAAA+TGG | - | chr3.3:35382732-35382751 | None:intergenic | 30.0% | |
| TTGTTCTCTTATATCATGTG+TGG | + | chr3.3:35383590-35383609 | MS.gene019123:intron | 30.0% | |
| TTTCATTCTCCAGATAATTG+GGG | - | chr3.3:35381151-35381170 | None:intergenic | 30.0% | |
| TTTGGGAGTAGTGTATATAA+GGG | + | chr3.3:35379890-35379909 | MS.gene019123:intron | 30.0% | |
| ! | AAAGAAACCAATAGTTGATG+GGG | - | chr3.3:35379837-35379856 | None:intergenic | 30.0% |
| ! | AAAGTAAGTTTTTCCAACAG+GGG | + | chr3.3:35380248-35380267 | MS.gene019123:intron | 30.0% |
| ! | AAGTTGATCGAAAAAGGAAT+AGG | + | chr3.3:35378353-35378372 | MS.gene019123:CDS | 30.0% |
| ! | ACAGAATCAGTGTTGTTAAA+TGG | + | chr3.3:35380658-35380677 | MS.gene019123:intron | 30.0% |
| ! | ACATTGTCAACTCTTTTGTA+TGG | + | chr3.3:35380844-35380863 | MS.gene019123:intron | 30.0% |
| ! | AGAAAGTAAGTTTTTCCAAC+AGG | + | chr3.3:35380246-35380265 | MS.gene019123:intron | 30.0% |
| ! | AGTGTATATAAGGGTATAAC+TGG | + | chr3.3:35379899-35379918 | MS.gene019123:intron | 30.0% |
| ! | ATAATGATAATGAGAAGGAC+AGG | + | chr3.3:35378605-35378624 | MS.gene019123:CDS | 30.0% |
| ! | ATATAAGGGTATAACTGGAA+AGG | + | chr3.3:35379904-35379923 | MS.gene019123:intron | 30.0% |
| ! | CTTTTCATTCTCCAGATAAT+TGG | - | chr3.3:35381153-35381172 | None:intergenic | 30.0% |
| ! | GAAAGTAAGTTTTTCCAACA+GGG | + | chr3.3:35380247-35380266 | MS.gene019123:intron | 30.0% |
| ! | GAGTTTTACTGGTGAAAAAA+AGG | - | chr3.3:35383324-35383343 | None:intergenic | 30.0% |
| ! | GAGTTTTCCCTTTAACTATA+TGG | + | chr3.3:35379469-35379488 | MS.gene019123:intron | 30.0% |
| ! | GCATCATTTTCACAAATACA+CGG | - | chr3.3:35380431-35380450 | None:intergenic | 30.0% |
| ! | GTCATGATATGTTTAGAACT+GGG | + | chr3.3:35380304-35380323 | MS.gene019123:intron | 30.0% |
| ! | TGTCATGATATGTTTAGAAC+TGG | + | chr3.3:35380303-35380322 | MS.gene019123:intron | 30.0% |
| ! | TTAGTAGACCAATGTTTTTC+TGG | + | chr3.3:35383249-35383268 | MS.gene019123:intron | 30.0% |
| ! | TTTATTATCAGACTAGCCAA+TGG | + | chr3.3:35382557-35382576 | MS.gene019123:intron | 30.0% |
| !! | AAGGAAGAGTATTAATGGAT+TGG | + | chr3.3:35378912-35378931 | MS.gene019123:CDS | 30.0% |
| !! | AATAGTTGATGGGGATAATT+TGG | - | chr3.3:35379828-35379847 | None:intergenic | 30.0% |
| !! | ACACTCATTTTGAAAACAGA+GGG | + | chr3.3:35379994-35380013 | MS.gene019123:intron | 30.0% |
| !! | AGAATATTATGGTGGATGAA+TGG | - | chr3.3:35382438-35382457 | None:intergenic | 30.0% |
| !! | ATTTCATTTTTCAATGCTGC+AGG | + | chr3.3:35383672-35383691 | MS.gene019123:intron | 30.0% |
| !! | CACTTATGCTTTTAACTACT+GGG | + | chr3.3:35382280-35382299 | MS.gene019123:intron | 30.0% |
| !! | GAATATTATGGTGGATGAAT+GGG | - | chr3.3:35382437-35382456 | None:intergenic | 30.0% |
| !! | GCTTTAAGGAAGAGTATTAA+TGG | + | chr3.3:35378907-35378926 | MS.gene019123:CDS | 30.0% |
| !! | TCAAAATGAGTGTCACTTTA+GGG | - | chr3.3:35379987-35380006 | None:intergenic | 30.0% |
| !! | TCACTTATGCTTTTAACTAC+TGG | + | chr3.3:35382279-35382298 | MS.gene019123:intron | 30.0% |
| !! | TTCAAAATGAGTGTCACTTT+AGG | - | chr3.3:35379988-35380007 | None:intergenic | 30.0% |
| !! | TTTTGAATCCATTTTTCCCA+AGG | + | chr3.3:35383762-35383781 | MS.gene019123:CDS | 30.0% |
| !! | TTTTGGGAGTAGTGTATATA+AGG | + | chr3.3:35379889-35379908 | MS.gene019123:intron | 30.0% |
| !!! | AAGTTGGTGATCTTTTACTT+AGG | + | chr3.3:35379109-35379128 | MS.gene019123:CDS | 30.0% |
| !!! | AATTTTTTGCTCATTTGCTC+GGG | + | chr3.3:35381715-35381734 | MS.gene019123:CDS | 30.0% |
| !!! | TCCATTACTCTAGTTTTCAA+TGG | + | chr3.3:35382890-35382909 | MS.gene019123:intron | 30.0% |
| AAAGCAATAAAAACCCAGGA+AGG | - | chr3.3:35382327-35382346 | None:intergenic | 35.0% | |
| AAATCAAATGGACGAAATGG+AGG | - | chr3.3:35382729-35382748 | None:intergenic | 35.0% | |
| AACGTGATGTGAAGAGAATT+AGG | + | chr3.3:35378425-35378444 | MS.gene019123:CDS | 35.0% | |
| AACGTTGGGTTCAAATCAAA+TGG | - | chr3.3:35382741-35382760 | None:intergenic | 35.0% | |
| AACTATAAAGCAGCGGAATT+TGG | + | chr3.3:35380684-35380703 | MS.gene019123:intron | 35.0% | |
| AATATATTGGTGGAGCAGTT+TGG | + | chr3.3:35383510-35383529 | MS.gene019123:intron | 35.0% | |
| ACACAAGACATGATACACTT+AGG | - | chr3.3:35382413-35382432 | None:intergenic | 35.0% | |
| ACGTGATGTGAAGAGAATTA+GGG | + | chr3.3:35378426-35378445 | MS.gene019123:CDS | 35.0% | |
| AGACTAATCTTGTCAATCTG+CGG | + | chr3.3:35381312-35381331 | MS.gene019123:CDS | 35.0% | |
| AGCTTAGCTAAAAAACCACT+GGG | - | chr3.3:35383166-35383185 | None:intergenic | 35.0% | |
| AGGGATAGAGTTGAAAAGAA+TGG | + | chr3.3:35378679-35378698 | MS.gene019123:CDS | 35.0% | |
| AGTAAAAGATCACCAACTTG+AGG | - | chr3.3:35379108-35379127 | None:intergenic | 35.0% | |
| AGTAGTTTGAAGGATGACTA+AGG | + | chr3.3:35380017-35380036 | MS.gene019123:intron | 35.0% | |
| ATATAAGGATGATTCCGATG+AGG | + | chr3.3:35378522-35378541 | MS.gene019123:CDS | 35.0% | |
| ATATATGATAAGACGTGCCA+AGG | - | chr3.3:35381753-35381772 | None:intergenic | 35.0% | |
| ATCATCCTCGCTAACTTAAA+CGG | - | chr3.3:35378835-35378854 | None:intergenic | 35.0% | |
| ATCGAAAAAGGAATAGGGAT+AGG | + | chr3.3:35378359-35378378 | MS.gene019123:CDS | 35.0% | |
| ATCTGCCATAAACAACATCA+TGG | - | chr3.3:35382773-35382792 | None:intergenic | 35.0% | |
| ATGATTGTGTTGCACTTACA+GGG | + | chr3.3:35380905-35380924 | MS.gene019123:intron | 35.0% | |
| ATGTGAAGAGAATTAGGGAT+AGG | + | chr3.3:35378431-35378450 | MS.gene019123:CDS | 35.0% | |
| ATTTATTTGTTTCGAGCCTG+TGG | - | chr3.3:35381680-35381699 | None:intergenic | 35.0% | |
| CAAAATACTTCCTTGAGAGA+TGG | - | chr3.3:35383050-35383069 | None:intergenic | 35.0% | |
| CATAAGAAAGGCAAAGTTTC+AGG | + | chr3.3:35380589-35380608 | MS.gene019123:CDS | 35.0% | |
| CATGGGAGATATAAAACGTT+GGG | - | chr3.3:35382755-35382774 | None:intergenic | 35.0% | |
| CGATCCATCATAGGATATTA+TGG | - | chr3.3:35382204-35382223 | None:intergenic | 35.0% | |
| CTGAAACTTTGCCTTTCTTA+TGG | - | chr3.3:35380591-35380610 | None:intergenic | 35.0% | |
| GAAAGTAAGAAGAAAGAGGA+AGG | + | chr3.3:35378721-35378740 | MS.gene019123:CDS | 35.0% | |
| GATAGAGTTGAAAAGAATGG+TGG | + | chr3.3:35378682-35378701 | MS.gene019123:CDS | 35.0% | |
| GATGCCATAATATCCTATGA+TGG | + | chr3.3:35382197-35382216 | MS.gene019123:intron | 35.0% | |
| GCCATTGAAAACTAGAGTAA+TGG | - | chr3.3:35382894-35382913 | None:intergenic | 35.0% | |
| GGAAGAAAGTAAGAAGAAAG+AGG | + | chr3.3:35378717-35378736 | MS.gene019123:CDS | 35.0% | |
| GTAAAATTGGAAAACACGCA+AGG | - | chr3.3:35379196-35379215 | None:intergenic | 35.0% | |
| TAGAATCAGTTAAGGGATTC+AGG | - | chr3.3:35380129-35380148 | None:intergenic | 35.0% | |
| TATAATTCCGGAGTTGTTTG+CGG | + | chr3.3:35378966-35378985 | MS.gene019123:CDS | 35.0% | |
| TCAGATATTACGGTCTTCTA+GGG | + | chr3.3:35381580-35381599 | MS.gene019123:CDS | 35.0% | |
| TCATGGGAGATATAAAACGT+TGG | - | chr3.3:35382756-35382775 | None:intergenic | 35.0% | |
| TCGAAAAAGGAATAGGGATA+GGG | + | chr3.3:35378360-35378379 | MS.gene019123:CDS | 35.0% | |
| TCTGCCATAAACAACATCAT+GGG | - | chr3.3:35382772-35382791 | None:intergenic | 35.0% | |
| TGTGAAGAGAATTAGGGATA+GGG | + | chr3.3:35378432-35378451 | MS.gene019123:CDS | 35.0% | |
| TGTTGTCAAATCACAGATAG+CGG | - | chr3.3:35380818-35380837 | None:intergenic | 35.0% | |
| TTAACCTCTCATTTAGCAAC+CGG | - | chr3.3:35383720-35383739 | None:intergenic | 35.0% | |
| TTTATATGTTCAGCCTTCCT+GGG | + | chr3.3:35382311-35382330 | MS.gene019123:intron | 35.0% | |
| TTTATGTACCCAACCTTAAG+TGG | - | chr3.3:35382172-35382191 | None:intergenic | 35.0% | |
| ! | AAGGATGGGCAAAACTATTT+TGG | - | chr3.3:35383011-35383030 | None:intergenic | 35.0% |
| ! | AATGTCCAGTGTAGATTTTG+AGG | + | chr3.3:35381355-35381374 | MS.gene019123:CDS | 35.0% |
| ! | AGAATTTGATTCGTGGAAGA+GGG | + | chr3.3:35378989-35379008 | MS.gene019123:CDS | 35.0% |
| ! | AGGAAGAAGTTGATCGAAAA+AGG | + | chr3.3:35378347-35378366 | MS.gene019123:CDS | 35.0% |
| ! | ATCTCCCATGATGTTGTTTA+TGG | + | chr3.3:35382765-35382784 | MS.gene019123:intron | 35.0% |
| ! | ATGCAGAATCGTGTGTTTTT+AGG | - | chr3.3:35383793-35383812 | None:intergenic | 35.0% |
| ! | CATTCACAAGTGAGTTTTAC+TGG | - | chr3.3:35383335-35383354 | None:intergenic | 35.0% |
| ! | CATTTTCACAAATACACGGA+TGG | - | chr3.3:35380427-35380446 | None:intergenic | 35.0% |
| ! | GGCTTGTATTTCTGAAAACA+TGG | + | chr3.3:35379595-35379614 | MS.gene019123:intron | 35.0% |
| ! | TCCCTTAACTGATTCTACTT+CGG | + | chr3.3:35380132-35380151 | MS.gene019123:intron | 35.0% |
| ! | TTTTATATGTTCAGCCTTCC+TGG | + | chr3.3:35382310-35382329 | MS.gene019123:intron | 35.0% |
| ! | TTTTTCCAACAGGGGTTATA+AGG | + | chr3.3:35380256-35380275 | MS.gene019123:intron | 35.0% |
| !! | ACTATTTTATTGTTTGGGGC+AGG | + | chr3.3:35380615-35380634 | MS.gene019123:intron | 35.0% |
| !! | ACTGCAAAAATGGTTTTGCT+TGG | - | chr3.3:35380283-35380302 | None:intergenic | 35.0% |
| !! | ATGCAGAAGTATTCTAATGC+AGG | + | chr3.3:35380401-35380420 | MS.gene019123:intron | 35.0% |
| !! | CAAAATGAGTGTCACTTTAG+GGG | - | chr3.3:35379986-35380005 | None:intergenic | 35.0% |
| !! | CTGCAAAAATGGTTTTGCTT+GGG | - | chr3.3:35380282-35380301 | None:intergenic | 35.0% |
| !! | GACACTCATTTTGAAAACAG+AGG | + | chr3.3:35379993-35380012 | MS.gene019123:intron | 35.0% |
| !! | GTTTTGTTCTTTTGTTTGCG+AGG | - | chr3.3:35382113-35382132 | None:intergenic | 35.0% |
| !! | TAATATCCTATGATGGATCG+TGG | + | chr3.3:35382204-35382223 | MS.gene019123:intron | 35.0% |
| !! | TGCAGAATCGTGTGTTTTTA+GGG | - | chr3.3:35383792-35383811 | None:intergenic | 35.0% |
| !! | TTGGTGATCTTTTACTTAGG+AGG | + | chr3.3:35379112-35379131 | MS.gene019123:CDS | 35.0% |
| !! | TTGGTGGTTTGCTAGAAAAT+AGG | + | chr3.3:35380048-35380067 | MS.gene019123:intron | 35.0% |
| !! | TTTTTCACATCCATTGGTCT+TGG | + | chr3.3:35383817-35383836 | MS.gene019123:CDS | 35.0% |
| AAACAGAGGGAGTAGTTTGA+AGG | + | chr3.3:35380007-35380026 | MS.gene019123:intron | 40.0% | |
| AAAGGAATAGGGATAGGGAT+AGG | + | chr3.3:35378365-35378384 | MS.gene019123:CDS | 40.0% | |
| AAATTCTCCGCAAACAACTC+CGG | - | chr3.3:35378976-35378995 | None:intergenic | 40.0% | |
| AACACGAAGTTTCCTCAAGT+TGG | + | chr3.3:35379093-35379112 | MS.gene019123:CDS | 40.0% | |
| AACAGCCTAAATAGCAGCAT+TGG | - | chr3.3:35382940-35382959 | None:intergenic | 40.0% | |
| AACGAATCTCCAAACTGCTA+TGG | - | chr3.3:35383453-35383472 | None:intergenic | 40.0% | |
| AAGAACCCTTATACCTTCGA+CGG | - | chr3.3:35378396-35378415 | None:intergenic | 40.0% | |
| AAGAAGAAAGAGGAAGGAAG+TGG | + | chr3.3:35378727-35378746 | MS.gene019123:CDS | 40.0% | |
| AAGCTCCGATTCATCAGATT+CGG | + | chr3.3:35383942-35383961 | MS.gene019123:CDS | 40.0% | |
| AAGGAATAGGGATAGGGATA+GGG | + | chr3.3:35378366-35378385 | MS.gene019123:CDS | 40.0% | |
| AATGGAACCTATGCTCATCA+TGG | + | chr3.3:35382575-35382594 | MS.gene019123:intron | 40.0% | |
| AATGGCGATGCATCTAAGTT+AGG | + | chr3.3:35378784-35378803 | MS.gene019123:CDS | 40.0% | |
| AATTTCTCACCCATCTCTCA+AGG | + | chr3.3:35383037-35383056 | MS.gene019123:intron | 40.0% | |
| AGAAGAAAGAGGAAGGAAGT+GGG | + | chr3.3:35378728-35378747 | MS.gene019123:CDS | 40.0% | |
| AGAGGAATTTGGATAGGGAA+AGG | + | chr3.3:35378557-35378576 | MS.gene019123:CDS | 40.0% | |
| AGAGTTGAAGAAAAGCTTGC+TGG | + | chr3.3:35381181-35381200 | MS.gene019123:CDS | 40.0% | |
| AGCAAATACATCCGTAAACC+CGG | - | chr3.3:35379055-35379074 | None:intergenic | 40.0% | |
| AGCAGTATTCATTGATCCAC+AGG | + | chr3.3:35381661-35381680 | MS.gene019123:CDS | 40.0% | |
| AGCGTATAAGCGTAATGACA+AGG | + | chr3.3:35379155-35379174 | MS.gene019123:CDS | 40.0% | |
| AGCTTCCTCATTCTCTTCAT+CGG | - | chr3.3:35381270-35381289 | None:intergenic | 40.0% | |
| AGGATCTATTTCCTCATCCA+AGG | - | chr3.3:35380996-35381015 | None:intergenic | 40.0% | |
| AGTTGACGATAAGAGTAGTC+CGG | + | chr3.3:35378861-35378880 | MS.gene019123:CDS | 40.0% | |
| ATACCGGCAAGTGTGATAAA+TGG | + | chr3.3:35378766-35378785 | MS.gene019123:CDS | 40.0% | |
| ATATCATGTGTGGGATGTAC+TGG | + | chr3.3:35383600-35383619 | MS.gene019123:intron | 40.0% | |
| ATCATATATTCGCCTGACTG+AGG | + | chr3.3:35381764-35381783 | MS.gene019123:CDS | 40.0% | |
| ATCGTGTATGAAGTCACAGA+TGG | + | chr3.3:35379023-35379042 | MS.gene019123:CDS | 40.0% | |
| ATGACGATGATAGGAGGAAT+GGG | + | chr3.3:35378650-35378669 | MS.gene019123:CDS | 40.0% | |
| ATGATGAGCATAGGTTCCAT+TGG | - | chr3.3:35382576-35382595 | None:intergenic | 40.0% | |
| ATGGAACCTATGCTCATCAT+GGG | + | chr3.3:35382576-35382595 | MS.gene019123:intron | 40.0% | |
| ATGGCGATGCATCTAAGTTA+GGG | + | chr3.3:35378785-35378804 | MS.gene019123:CDS | 40.0% | |
| ATGGTGCAACTATAAAGCAG+CGG | + | chr3.3:35380677-35380696 | MS.gene019123:intron | 40.0% | |
| ATTCTCCAGATAATTGGGGT+CGG | - | chr3.3:35381147-35381166 | None:intergenic | 40.0% | |
| CCCGAAGTAGAATCAGTTAA+GGG | - | chr3.3:35380136-35380155 | None:intergenic | 40.0% | |
| CGTATCTTCCATACAAAGAG+AGG | - | chr3.3:35383639-35383658 | None:intergenic | 40.0% | |
| CTAAAAATCCATCTTGAGCC+AGG | + | chr3.3:35381395-35381414 | MS.gene019123:CDS | 40.0% | |
| CTAAGTTAGGGAAAAGTGGA+GGG | + | chr3.3:35378797-35378816 | MS.gene019123:CDS | 40.0% | |
| CTCAGATATTACGGTCTTCT+AGG | + | chr3.3:35381579-35381598 | MS.gene019123:CDS | 40.0% | |
| GAATTAGGGATAGGGAAAGA+AGG | + | chr3.3:35378440-35378459 | MS.gene019123:CDS | 40.0% | |
| GAGCTTAGCTAAAAAACCAC+TGG | - | chr3.3:35383167-35383186 | None:intergenic | 40.0% | |
| GATGACTAAGGCATGATGAT+TGG | + | chr3.3:35380029-35380048 | MS.gene019123:intron | 40.0% | |
| GATGATTGTGTTGCACTTAC+AGG | + | chr3.3:35380904-35380923 | MS.gene019123:intron | 40.0% | |
| GCAAGTTTCAGATTCTGACT+CGG | + | chr3.3:35383906-35383925 | MS.gene019123:CDS | 40.0% | |
| GCATCTAAGTTAGGGAAAAG+TGG | + | chr3.3:35378793-35378812 | MS.gene019123:CDS | 40.0% | |
| GCTTAGCTAAAAAACCACTG+GGG | - | chr3.3:35383165-35383184 | None:intergenic | 40.0% | |
| GGATTCAAAAGAATCCTGCA+TGG | - | chr3.3:35383752-35383771 | None:intergenic | 40.0% | |
| GTTAAATGATCCAACCATGC+AGG | + | chr3.3:35383735-35383754 | MS.gene019123:CDS | 40.0% | |
| TAAGTTAGCGAGGATGATGA+AGG | + | chr3.3:35378837-35378856 | MS.gene019123:CDS | 40.0% | |
| TAAGTTAGGGAAAAGTGGAG+GGG | + | chr3.3:35378798-35378817 | MS.gene019123:CDS | 40.0% | |
| TACTGGTGAAAAAAAGGTCG+AGG | - | chr3.3:35383318-35383337 | None:intergenic | 40.0% | |
| TATTCACGCCTCTCTTTGTA+TGG | + | chr3.3:35383628-35383647 | MS.gene019123:intron | 40.0% | |
| TCAAAAGAATCCTGCATGGT+TGG | - | chr3.3:35383748-35383767 | None:intergenic | 40.0% | |
| TCCAAAGAAAAGAGAGGACA+AGG | + | chr3.3:35382084-35382103 | MS.gene019123:intron | 40.0% | |
| TCTAAGTTAGGGAAAAGTGG+AGG | + | chr3.3:35378796-35378815 | MS.gene019123:CDS | 40.0% | |
| TGAATCCGATGAAGAGAATG+AGG | + | chr3.3:35381262-35381281 | MS.gene019123:CDS | 40.0% | |
| TGCTTCCTCAAAATCTACAC+TGG | - | chr3.3:35381363-35381382 | None:intergenic | 40.0% | |
| TGTATGAAATGTTGCCACTG+CGG | + | chr3.3:35382963-35382982 | MS.gene019123:intron | 40.0% | |
| TGTGAAGTTTGTAGCACATC+TGG | + | chr3.3:35379294-35379313 | MS.gene019123:CDS | 40.0% | |
| TGTTGTTGCATGATCATCCT+TGG | - | chr3.3:35383883-35383902 | None:intergenic | 40.0% | |
| TTCACAGCAGCAAGTAATTG+AGG | - | chr3.3:35379280-35379299 | None:intergenic | 40.0% | |
| TTCCTGAACAAGTGACAACA+TGG | + | chr3.3:35382623-35382642 | MS.gene019123:intron | 40.0% | |
| TTGAGTTCGATTCAAGTACC+TGG | - | chr3.3:35381833-35381852 | None:intergenic | 40.0% | |
| TTTCGTGGAATTCTGCATGA+AGG | + | chr3.3:35380521-35380540 | MS.gene019123:CDS | 40.0% | |
| ! | AAAGGAGGCATAGAGTTGAT+AGG | + | chr3.3:35378575-35378594 | MS.gene019123:CDS | 40.0% |
| ! | AGAATGGTGGTGATAATGAG+AGG | + | chr3.3:35378695-35378714 | MS.gene019123:CDS | 40.0% |
| ! | ATCTGAGATAAGTTCTCTCC+TGG | - | chr3.3:35381566-35381585 | None:intergenic | 40.0% |
| ! | CCCTTAACTGATTCTACTTC+GGG | + | chr3.3:35380133-35380152 | MS.gene019123:intron | 40.0% |
| ! | CCTTAACTGATTCTACTTCG+GGG | + | chr3.3:35380134-35380153 | MS.gene019123:intron | 40.0% |
| ! | GAATGGTGGTGATAATGAGA+GGG | + | chr3.3:35378696-35378715 | MS.gene019123:CDS | 40.0% |
| ! | GAGAATTTGATTCGTGGAAG+AGG | + | chr3.3:35378988-35379007 | MS.gene019123:CDS | 40.0% |
| ! | GAGTTGAAGAAAAGCTTGCT+GGG | + | chr3.3:35381182-35381201 | MS.gene019123:CDS | 40.0% |
| ! | GATAACCGTCGAAGGTATAA+GGG | + | chr3.3:35378388-35378407 | MS.gene019123:CDS | 40.0% |
| ! | GCATACCAATGCTGCTATTT+AGG | + | chr3.3:35382932-35382951 | MS.gene019123:intron | 40.0% |
| ! | TCCTTGTCCTCTCTTTTCTT+TGG | - | chr3.3:35382088-35382107 | None:intergenic | 40.0% |
| ! | TGCAAGTTGGGAACAAATGA+GGG | - | chr3.3:35383142-35383161 | None:intergenic | 40.0% |
| ! | TTCCATGTTGTCACTTGTTC+AGG | - | chr3.3:35382628-35382647 | None:intergenic | 40.0% |
| ! | TTGTGTGTCATTGATGCAGA+TGG | + | chr3.3:35381509-35381528 | MS.gene019123:intron | 40.0% |
| ! | TTTGCGGAGAATTTGATTCG+TGG | + | chr3.3:35378982-35379001 | MS.gene019123:CDS | 40.0% |
| !! | AAGGAGGCATAGAGTTGATA+GGG | + | chr3.3:35378576-35378595 | MS.gene019123:CDS | 40.0% |
| !! | AGTGTAGATTTTGAGGAAGC+AGG | + | chr3.3:35381362-35381381 | MS.gene019123:CDS | 40.0% |
| !!! | GTGTTTTTAGGGTTGTCCTT+GGG | - | chr3.3:35383781-35383800 | None:intergenic | 40.0% |
| !!! | GTTGGTTTTGTGACAGAATG+TGG | + | chr3.3:35379406-35379425 | MS.gene019123:CDS | 40.0% |
| !!! | TGTGTTTTTAGGGTTGTCCT+TGG | - | chr3.3:35383782-35383801 | None:intergenic | 40.0% |
| AACTCACCATGAAGTCCTCT+CGG | - | chr3.3:35379454-35379473 | None:intergenic | 45.0% | |
| AATGTACCAAGGGAAGTCTC+AGG | - | chr3.3:35381016-35381035 | None:intergenic | 45.0% | |
| ACTCATGCCCAAAACAACTG+GGG | + | chr3.3:35382351-35382370 | MS.gene019123:intron | 45.0% | |
| ACTCATTCCAGTGGCATCAA+TGG | - | chr3.3:35382862-35382881 | None:intergenic | 45.0% | |
| ACTTCAACACTGTCATCGGA+AGG | - | chr3.3:35379382-35379401 | None:intergenic | 45.0% | |
| ACTTGACTCTGACTCAGAAC+TGG | - | chr3.3:35383971-35383990 | None:intergenic | 45.0% | |
| AGAAGGACAGGAAGAGAGAA+AGG | + | chr3.3:35378617-35378636 | MS.gene019123:CDS | 45.0% | |
| AGCCACTTCAACACTGTCAT+CGG | - | chr3.3:35379386-35379405 | None:intergenic | 45.0% | |
| AGCTCCGATTCATCAGATTC+GGG | + | chr3.3:35383943-35383962 | MS.gene019123:CDS | 45.0% | |
| AGGATCTCAACTCATTCCAG+TGG | - | chr3.3:35382871-35382890 | None:intergenic | 45.0% | |
| AGGCACTAGTTAGACTTGGA+TGG | - | chr3.3:35383292-35383311 | None:intergenic | 45.0% | |
| AGGCATGGCCAGAAAAACAT+TGG | - | chr3.3:35383260-35383279 | None:intergenic | 45.0% | |
| AGGGTTGTCCTTGGGAAAAA+TGG | - | chr3.3:35383773-35383792 | None:intergenic | 45.0% | |
| AGTAAGACCACCAAGACCAA+TGG | - | chr3.3:35383830-35383849 | None:intergenic | 45.0% | |
| ATAGAGCCACGATCCATCAT+AGG | - | chr3.3:35382213-35382232 | None:intergenic | 45.0% | |
| ATAGATCCTGAGACTTCCCT+TGG | + | chr3.3:35381007-35381026 | MS.gene019123:CDS | 45.0% | |
| ATCCTCGCTAACTTAAACGG+CGG | - | chr3.3:35378832-35378851 | None:intergenic | 45.0% | |
| ATGTACCCAACCTTAAGTGG+TGG | - | chr3.3:35382169-35382188 | None:intergenic | 45.0% | |
| ATTGCCAACTGAAGCTGGAA+TGG | - | chr3.3:35382838-35382857 | None:intergenic | 45.0% | |
| CAAATGGACGAAATGGAGGA+AGG | - | chr3.3:35382725-35382744 | None:intergenic | 45.0% | |
| CAAGTCAACCTCTGATACTC+CGG | - | chr3.3:35378883-35378902 | None:intergenic | 45.0% | |
| CACTCATGCCCAAAACAACT+GGG | + | chr3.3:35382350-35382369 | MS.gene019123:intron | 45.0% | |
| CCCCGAAGTAGAATCAGTTA+AGG | - | chr3.3:35380137-35380156 | None:intergenic | 45.0% | |
| CCTACTTGAATCAGCATGCT+AGG | - | chr3.3:35383213-35383232 | None:intergenic | 45.0% | |
| CTAATCTTGTCAATCTGCGG+CGG | + | chr3.3:35381315-35381334 | MS.gene019123:CDS | 45.0% | |
| GAAGGACAGGAAGAGAGAAA+GGG | + | chr3.3:35378618-35378637 | MS.gene019123:CDS | 45.0% | |
| GACTAAGGCATGATGATTGG+TGG | + | chr3.3:35380032-35380051 | MS.gene019123:intron | 45.0% | |
| GACTTGGATGGAACTAAGCA+AGG | - | chr3.3:35383280-35383299 | None:intergenic | 45.0% | |
| GATGACGATGATAGGAGGAA+TGG | + | chr3.3:35378649-35378668 | MS.gene019123:CDS | 45.0% | |
| GCAAATACATCCGTAAACCC+GGG | - | chr3.3:35379054-35379073 | None:intergenic | 45.0% | |
| GGAATTTGGATAGGGAAAGG+AGG | + | chr3.3:35378560-35378579 | MS.gene019123:CDS | 45.0% | |
| GGTTCCCGAATCTGATGAAT+CGG | - | chr3.3:35383950-35383969 | None:intergenic | 45.0% | |
| TACAGGGTTATCCAGCTGTT+CGG | + | chr3.3:35380921-35380940 | MS.gene019123:intron | 45.0% | |
| TACCGTCTACAATGTCCTCT+TGG | - | chr3.3:35382518-35382537 | None:intergenic | 45.0% | |
| TCAATGCTTACCTCTTGACC+TGG | - | chr3.3:35381416-35381435 | None:intergenic | 45.0% | |
| TCACTCATGCCCAAAACAAC+TGG | + | chr3.3:35382349-35382368 | MS.gene019123:intron | 45.0% | |
| TCGCCATTTATCACACTTGC+CGG | - | chr3.3:35378772-35378791 | None:intergenic | 45.0% | |
| TGAAAAAAAGGTCGAGGCTG+AGG | - | chr3.3:35383312-35383331 | None:intergenic | 45.0% | |
| TGACGATGATAGGAGGAATG+GGG | + | chr3.3:35378651-35378670 | MS.gene019123:CDS | 45.0% | |
| TGTACCCAACCTTAAGTGGT+GGG | - | chr3.3:35382168-35382187 | None:intergenic | 45.0% | |
| TGTTTATGGCAGATGATGCC+AGG | + | chr3.3:35382779-35382798 | MS.gene019123:intron | 45.0% | |
| TTCTCCAGATAATTGGGGTC+GGG | - | chr3.3:35381146-35381165 | None:intergenic | 45.0% | |
| TTGGGAACAAATGAGGGAGT+GGG | - | chr3.3:35383136-35383155 | None:intergenic | 45.0% | |
| ! | AAAGAAGGCATAGGGCTGAT+AGG | + | chr3.3:35378455-35378474 | MS.gene019123:CDS | 45.0% |
| ! | AAGAAGGCATAGGGCTGATA+GGG | + | chr3.3:35378456-35378475 | MS.gene019123:CDS | 45.0% |
| ! | ATTTTGGACTTGTGCCTGCA+GGG | - | chr3.3:35382995-35383014 | None:intergenic | 45.0% |
| ! | CAGGAATTGTCAGAGCATCT+AGG | + | chr3.3:35383691-35383710 | MS.gene019123:intron | 45.0% |
| ! | GGAGTATCAGAGGTTGACTT+GGG | + | chr3.3:35378882-35378901 | MS.gene019123:CDS | 45.0% |
| ! | GGATAACCGTCGAAGGTATA+AGG | + | chr3.3:35378387-35378406 | MS.gene019123:CDS | 45.0% |
| ! | GGATAGGGAAAGAAGGCATA+GGG | + | chr3.3:35378447-35378466 | MS.gene019123:CDS | 45.0% |
| ! | GGTATCTTTGAGCGTTTTCG+TGG | + | chr3.3:35380506-35380525 | MS.gene019123:intron | 45.0% |
| ! | GGTGGATGAAAGGTACACTT+GGG | - | chr3.3:35382817-35382836 | None:intergenic | 45.0% |
| ! | GTGCAAGTTGGGAACAAATG+AGG | - | chr3.3:35383143-35383162 | None:intergenic | 45.0% |
| ! | GTGGATGAAAGGTACACTTG+GGG | - | chr3.3:35382816-35382835 | None:intergenic | 45.0% |
| ! | TACGGATGTATTTGCTGCGA+TGG | + | chr3.3:35379059-35379078 | MS.gene019123:CDS | 45.0% |
| ! | TCGTGGTGGTGAAGATTTAG+AGG | + | chr3.3:35378327-35378346 | MS.gene019123:CDS | 45.0% |
| ! | TGGTGGATGAAAGGTACACT+TGG | - | chr3.3:35382818-35382837 | None:intergenic | 45.0% |
| ! | TTCCGATGACAGTGTTGAAG+TGG | + | chr3.3:35379381-35379400 | MS.gene019123:CDS | 45.0% |
| !! | AAGCTGGAATGGTGGATGAA+AGG | - | chr3.3:35382827-35382846 | None:intergenic | 45.0% |
| !! | ACTCTTGCCCCAGTTGTTTT+GGG | - | chr3.3:35382361-35382380 | None:intergenic | 45.0% |
| !! | CCTAGCATGCTGATTCAAGT+AGG | + | chr3.3:35383210-35383229 | MS.gene019123:intron | 45.0% |
| !! | GGTTGACTTGGGATGCTTTA+AGG | + | chr3.3:35378893-35378912 | MS.gene019123:CDS | 45.0% |
| !! | TATTTTGGACTTGTGCCTGC+AGG | - | chr3.3:35382996-35383015 | None:intergenic | 45.0% |
| !! | TTCACATCCATTGGTCTTGG+TGG | + | chr3.3:35383820-35383839 | MS.gene019123:CDS | 45.0% |
| AAAACCACTGGGGTGCAAGT+TGG | - | chr3.3:35383155-35383174 | None:intergenic | 50.0% | |
| AAACCACTGGGGTGCAAGTT+GGG | - | chr3.3:35383154-35383173 | None:intergenic | 50.0% | |
| AGAATGTGGCTCAATGCTGC+AGG | + | chr3.3:35379420-35379439 | MS.gene019123:CDS | 50.0% | |
| AGATCGGCGTCGTCGATATA+AGG | + | chr3.3:35378507-35378526 | MS.gene019123:CDS | 50.0% | |
| AGTGAATCGTCCGAGGAAGA+AGG | + | chr3.3:35378232-35378251 | MS.gene019123:CDS | 50.0% | |
| ATAGGAGGAATGGGGAGAGA+AGG | + | chr3.3:35378659-35378678 | MS.gene019123:CDS | 50.0% | |
| ATCGACGCGATGACGATGAT+AGG | + | chr3.3:35378641-35378660 | MS.gene019123:CDS | 50.0% | |
| ATGGCATTGCCAACTGAAGC+TGG | - | chr3.3:35382843-35382862 | None:intergenic | 50.0% | |
| CAAACCCGACCCCAATTATC+TGG | + | chr3.3:35381139-35381158 | MS.gene019123:CDS | 50.0% | |
| CAGTGTGGCAGATTGCATTG+CGG | - | chr3.3:35383430-35383449 | None:intergenic | 50.0% | |
| CTCATCCAAGGAGACTTCGT+GGG | - | chr3.3:35380984-35381003 | None:intergenic | 50.0% | |
| CTTCACCACCACGATGTTTC+CGG | - | chr3.3:35378321-35378340 | None:intergenic | 50.0% | |
| GACGAAATGGAGGAAGGCTT+TGG | - | chr3.3:35382719-35382738 | None:intergenic | 50.0% | |
| GATAACCCACGAAGTCTCCT+TGG | + | chr3.3:35380976-35380995 | MS.gene019123:CDS | 50.0% | |
| GCAAGACAGCAGGCAAACAA+GGG | - | chr3.3:35383189-35383208 | None:intergenic | 50.0% | |
| GCATAGGGCTGATAGGGTTA+GGG | + | chr3.3:35378462-35378481 | MS.gene019123:CDS | 50.0% | |
| GCATCCGGTTGCTAAATGAG+AGG | + | chr3.3:35383713-35383732 | MS.gene019123:CDS | 50.0% | |
| GGATGGAACTAAGCAAGGCA+TGG | - | chr3.3:35383275-35383294 | None:intergenic | 50.0% | |
| GGTGAGGAAGAGGAATCAGA+GGG | + | chr3.3:35381203-35381222 | MS.gene019123:CDS | 50.0% | |
| GTACCCAACCTTAAGTGGTG+GGG | - | chr3.3:35382167-35382186 | None:intergenic | 50.0% | |
| GTGAATCGTCCGAGGAAGAA+GGG | + | chr3.3:35378233-35378252 | MS.gene019123:CDS | 50.0% | |
| GTTGGGAACAAATGAGGGAG+TGG | - | chr3.3:35383137-35383156 | None:intergenic | 50.0% | |
| TACCCAACCTTAAGTGGTGG+GGG | - | chr3.3:35382166-35382185 | None:intergenic | 50.0% | |
| TAGGAGGAATGGGGAGAGAA+GGG | + | chr3.3:35378660-35378679 | MS.gene019123:CDS | 50.0% | |
| TCCAAACTGCTATGGCAGTG+TGG | - | chr3.3:35383445-35383464 | None:intergenic | 50.0% | |
| TCCACCATTCCAGCTTCAGT+TGG | + | chr3.3:35382831-35382850 | MS.gene019123:intron | 50.0% | |
| TGATTCTACTTCGGGGTCTG+AGG | + | chr3.3:35380141-35380160 | MS.gene019123:intron | 50.0% | |
| TGCAAGACAGCAGGCAAACA+AGG | - | chr3.3:35383190-35383209 | None:intergenic | 50.0% | |
| TGCGGCTAGATCAATGACAG+AGG | - | chr3.3:35383412-35383431 | None:intergenic | 50.0% | |
| TGGTGTCCCATGATGAGCAT+AGG | - | chr3.3:35382585-35382604 | None:intergenic | 50.0% | |
| TTCCCCCACCACTTAAGGTT+GGG | + | chr3.3:35382161-35382180 | MS.gene019123:intron | 50.0% | |
| TTTCCCCCACCACTTAAGGT+TGG | + | chr3.3:35382160-35382179 | MS.gene019123:intron | 50.0% | |
| ! | AGAGTAGTCCGGAGTATCAG+AGG | + | chr3.3:35378872-35378891 | MS.gene019123:CDS | 50.0% |
| ! | CGGAGTATCAGAGGTTGACT+TGG | + | chr3.3:35378881-35378900 | MS.gene019123:CDS | 50.0% |
| ! | GACAGTGTTGAAGTGGCTGT+TGG | + | chr3.3:35379388-35379407 | MS.gene019123:CDS | 50.0% |
| ! | GACTCTTGCCCCAGTTGTTT+TGG | - | chr3.3:35382362-35382381 | None:intergenic | 50.0% |
| ! | GATGAAAGGTACACTTGGGG+CGG | - | chr3.3:35382813-35382832 | None:intergenic | 50.0% |
| ! | GCATTTTCCCCCACCACTTA+AGG | + | chr3.3:35382156-35382175 | MS.gene019123:intron | 50.0% |
| ! | GCTGAGGCACTAGTTAGACT+TGG | - | chr3.3:35383296-35383315 | None:intergenic | 50.0% |
| ! | GGGATAGGGAAAGAAGGCAT+AGG | + | chr3.3:35378446-35378465 | MS.gene019123:CDS | 50.0% |
| ! | TGTCAGAGCATCTAGGCATC+CGG | + | chr3.3:35383698-35383717 | MS.gene019123:CDS | 50.0% |
| ! | TTCCGCCGTTTAAGTTAGCG+AGG | + | chr3.3:35378827-35378846 | MS.gene019123:CDS | 50.0% |
| ! | TTGGGCCTTATAACCCCTGT+TGG | - | chr3.3:35380264-35380283 | None:intergenic | 50.0% |
| !! | AGGGAGTGGGTTTTCTTCGA+CGG | - | chr3.3:35383123-35383142 | None:intergenic | 50.0% |
| !! | GAAGAAAAGCTTGCTGGGTG+AGG | + | chr3.3:35381187-35381206 | MS.gene019123:CDS | 50.0% |
| AAGTCACAGATGGCGTCACC+CGG | + | chr3.3:35379033-35379052 | MS.gene019123:CDS | 55.0% | |
| AAGTCGTGTCGTCCTCAGTC+AGG | - | chr3.3:35381779-35381798 | None:intergenic | 55.0% | |
| ACCTCCTCCTCTGCTAGTGA+TGG | + | chr3.3:35379655-35379674 | MS.gene019123:intron | 55.0% | |
| ACTCTCCCCATCACTAGCAG+AGG | - | chr3.3:35379665-35379684 | None:intergenic | 55.0% | |
| ATCAGAGGGAGAGGAAGGCT+CGG | + | chr3.3:35381217-35381236 | MS.gene019123:CDS | 55.0% | |
| CACTAGCAGAGGAGGAGGTA+AGG | - | chr3.3:35379654-35379673 | None:intergenic | 55.0% | |
| CATGCTAGGTGCAAGACAGC+AGG | - | chr3.3:35383199-35383218 | None:intergenic | 55.0% | |
| CCACGAAGTCTCCTTGGATG+AGG | + | chr3.3:35380982-35381001 | MS.gene019123:CDS | 55.0% | |
| CCATCTTGAGCCAGGTCAAG+AGG | + | chr3.3:35381403-35381422 | MS.gene019123:CDS | 55.0% | |
| CCTCATCCAAGGAGACTTCG+TGG | - | chr3.3:35380985-35381004 | None:intergenic | 55.0% | |
| CCTCCTCCTCTGCTAGTGAT+GGG | + | chr3.3:35379656-35379675 | MS.gene019123:intron | 55.0% | |
| CCTCTTGACCTGGCTCAAGA+TGG | - | chr3.3:35381406-35381425 | None:intergenic | 55.0% | |
| CGAAGGAAGTGAATCGTCCG+AGG | + | chr3.3:35378225-35378244 | MS.gene019123:CDS | 55.0% | |
| CTCCTCCTCTGCTAGTGATG+GGG | + | chr3.3:35379657-35379676 | MS.gene019123:intron | 55.0% | |
| CTCTCACCGAGAGGACTTCA+TGG | + | chr3.3:35379445-35379464 | MS.gene019123:CDS | 55.0% | |
| GACGAACTGCCCTTCTTCCT+CGG | - | chr3.3:35378245-35378264 | None:intergenic | 55.0% | |
| GACGCGATGACGATGATAGG+AGG | + | chr3.3:35378644-35378663 | MS.gene019123:CDS | 55.0% | |
| GAGGAATCAGAGGGAGAGGA+AGG | + | chr3.3:35381212-35381231 | MS.gene019123:CDS | 55.0% | |
| GATCTTCGCCGGAAACATCG+TGG | + | chr3.3:35378310-35378329 | MS.gene019123:CDS | 55.0% | |
| GCCAACTGAAGCTGGAATGG+TGG | - | chr3.3:35382835-35382854 | None:intergenic | 55.0% | |
| GCCACACTGCCATAGCAGTT+TGG | + | chr3.3:35383441-35383460 | MS.gene019123:intron | 55.0% | |
| GCTTCTCGAATGTTGCAGCC+AGG | + | chr3.3:35381545-35381564 | MS.gene019123:CDS | 55.0% | |
| GGAAGAGGAATCAGAGGGAG+AGG | + | chr3.3:35381208-35381227 | MS.gene019123:CDS | 55.0% | |
| GGAAGGCTCGGATGCTGAAT+CGG | + | chr3.3:35381229-35381248 | MS.gene019123:CDS | 55.0% | |
| GGCAATGCCATTGATGCCAC+TGG | + | chr3.3:35382852-35382871 | MS.gene019123:intron | 55.0% | |
| GGCATAGGGCTGATAGGGTT+AGG | + | chr3.3:35378461-35378480 | MS.gene019123:CDS | 55.0% | |
| GGGATAGGGATAACCGTCGA+AGG | + | chr3.3:35378380-35378399 | MS.gene019123:CDS | 55.0% | |
| GGGTGAGGAAGAGGAATCAG+AGG | + | chr3.3:35381202-35381221 | MS.gene019123:CDS | 55.0% | |
| TATCGCGCTAGAGCTGCTCA+CGG | + | chr3.3:35379342-35379361 | MS.gene019123:CDS | 55.0% | |
| TCAAGTTCAGGCCGAACAGC+TGG | - | chr3.3:35380935-35380954 | None:intergenic | 55.0% | |
| TCTGATCTTCCTGCTCCACG+AGG | - | chr3.3:35380958-35380977 | None:intergenic | 55.0% | |
| TGAACTTGACCTCGTGGAGC+AGG | + | chr3.3:35380946-35380965 | MS.gene019123:CDS | 55.0% | |
| TGCTCCACGAGGTCAAGTTC+AGG | - | chr3.3:35380947-35380966 | None:intergenic | 55.0% | |
| ! | TCGGGACTTTTGCTCTGCCT+TGG | + | chr3.3:35381733-35381752 | MS.gene019123:CDS | 55.0% |
| ! | TCTGCTAGTGATGGGGAGAG+TGG | + | chr3.3:35379664-35379683 | MS.gene019123:intron | 55.0% |
| !! | AAGCTTGCTGGGTGAGGAAG+AGG | + | chr3.3:35381193-35381212 | MS.gene019123:CDS | 55.0% |
| !! | CTTGGGGCGGATTTTTGACC+TGG | - | chr3.3:35382800-35382819 | None:intergenic | 55.0% |
| !! | GGGAGTGGGTTTTCTTCGAC+GGG | - | chr3.3:35383122-35383141 | None:intergenic | 55.0% |
| AGGAAGGAAGTGGGAGAGCG+AGG | + | chr3.3:35378737-35378756 | MS.gene019123:CDS | 60.0% | |
| AGGAAGTGGGAGAGCGAGGA+CGG | + | chr3.3:35378741-35378760 | MS.gene019123:CDS | 60.0% | |
| AGTCACAGATGGCGTCACCC+GGG | + | chr3.3:35379034-35379053 | MS.gene019123:CDS | 60.0% | |
| CCCATCACTAGCAGAGGAGG+AGG | - | chr3.3:35379659-35379678 | None:intergenic | 60.0% | |
| CTCCCCATCACTAGCAGAGG+AGG | - | chr3.3:35379662-35379681 | None:intergenic | 60.0% | |
| CTGACGTGGAGGATCTTCGC+CGG | + | chr3.3:35378299-35378318 | MS.gene019123:CDS | 60.0% | |
| CTGCAGGATCTCTCACCGAG+AGG | + | chr3.3:35379436-35379455 | MS.gene019123:CDS | 60.0% | |
| CTTCGCCGGAAACATCGTGG+TGG | + | chr3.3:35378313-35378332 | MS.gene019123:CDS | 60.0% | |
| GAGAGCGAGGACGGTGATAC+CGG | + | chr3.3:35378750-35378769 | MS.gene019123:CDS | 60.0% | |
| GATCCTCCACGTCAGCTCCA+CGG | - | chr3.3:35378294-35378313 | None:intergenic | 60.0% | |
| GATGGCGTCACCCGGGTTTA+CGG | + | chr3.3:35379041-35379060 | MS.gene019123:CDS | 60.0% | |
| GTTCCCAACTTGCACCCCAG+TGG | + | chr3.3:35383148-35383167 | MS.gene019123:intron | 60.0% | |
| TCGGCCTGAACTTGACCTCG+TGG | + | chr3.3:35380940-35380959 | MS.gene019123:CDS | 60.0% | |
| GAAGAGAAGCGAGACCGCCG+TGG | + | chr3.3:35378274-35378293 | MS.gene019123:CDS | 65.0% | |
| AGACCGCCGTGGAGCTGACG+TGG | + | chr3.3:35378285-35378304 | MS.gene019123:CDS | 70.0% | |
| CACTGCGGCTGCTACCCTGC+AGG | + | chr3.3:35382978-35382997 | MS.gene019123:intron | 70.0% | |
| CCTCCACGTCAGCTCCACGG+CGG | - | chr3.3:35378291-35378310 | None:intergenic | 70.0% | |
| CTGCAGGGTAGCAGCCGCAG+TGG | - | chr3.3:35382980-35382999 | None:intergenic | 70.0% | |
| CCGCCGTGGAGCTGACGTGG+AGG | + | chr3.3:35378288-35378307 | MS.gene019123:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 35378214 | 35384035 | 35378214 | ID=MS.gene019123 |
| chr3.3 | mRNA | 35378214 | 35384035 | 35378214 | ID=MS.gene019123.t1;Parent=MS.gene019123 |
| chr3.3 | exon | 35378214 | 35379176 | 35378214 | ID=MS.gene019123.t1.exon1;Parent=MS.gene019123.t1 |
| chr3.3 | CDS | 35378214 | 35379176 | 35378214 | ID=cds.MS.gene019123.t1;Parent=MS.gene019123.t1 |
| chr3.3 | exon | 35379277 | 35379466 | 35379277 | ID=MS.gene019123.t1.exon2;Parent=MS.gene019123.t1 |
| chr3.3 | CDS | 35379277 | 35379466 | 35379277 | ID=cds.MS.gene019123.t1;Parent=MS.gene019123.t1 |
| chr3.3 | exon | 35380507 | 35380610 | 35380507 | ID=MS.gene019123.t1.exon3;Parent=MS.gene019123.t1 |
| chr3.3 | CDS | 35380507 | 35380610 | 35380507 | ID=cds.MS.gene019123.t1;Parent=MS.gene019123.t1 |
| chr3.3 | exon | 35380926 | 35381028 | 35380926 | ID=MS.gene019123.t1.exon4;Parent=MS.gene019123.t1 |
| chr3.3 | CDS | 35380926 | 35381028 | 35380926 | ID=cds.MS.gene019123.t1;Parent=MS.gene019123.t1 |
| chr3.3 | exon | 35381132 | 35381424 | 35381132 | ID=MS.gene019123.t1.exon5;Parent=MS.gene019123.t1 |
| chr3.3 | CDS | 35381132 | 35381424 | 35381132 | ID=cds.MS.gene019123.t1;Parent=MS.gene019123.t1 |
| chr3.3 | exon | 35381528 | 35381833 | 35381528 | ID=MS.gene019123.t1.exon6;Parent=MS.gene019123.t1 |
| chr3.3 | CDS | 35381528 | 35381833 | 35381528 | ID=cds.MS.gene019123.t1;Parent=MS.gene019123.t1 |
| chr3.3 | exon | 35383694 | 35384035 | 35383694 | ID=MS.gene019123.t1.exon7;Parent=MS.gene019123.t1 |
| chr3.3 | CDS | 35383694 | 35384035 | 35383694 | ID=cds.MS.gene019123.t1;Parent=MS.gene019123.t1 |
| Gene Sequence |
| Protein sequence |
