AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene002376

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene002376.t1 MTR_2g012310 99.459 925 5 0 1 925 1 925 0.0 1894
MS.gene002376.t1 MTR_5g027050 95.614 114 5 0 434 547 107 220 3.19e-69 229
MS.gene002376.t1 MTR_5g027050 42.857 154 60 4 143 274 20 167 5.21e-27 110
MS.gene002376.t1 MTR_5g027050 76.471 51 7 1 250 300 61 106 1.32e-14 74.3
MS.gene002376.t1 MTR_2g031710 57.616 151 30 2 711 861 1 117 8.30e-46 160
MS.gene002376.t1 MTR_5g009520 26.543 324 193 11 436 749 92 380 7.51e-18 89.0
MS.gene002376.t1 MTR_5g009520 26.316 247 171 5 526 772 90 325 4.01e-15 80.5
MS.gene002376.t1 MTR_6g090890 26.471 306 181 10 436 732 92 362 8.46e-16 82.4
MS.gene002376.t1 MTR_6g090890 25.506 247 172 6 526 772 90 324 4.59e-12 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene002376.t1 AT5G28740 76.155 931 198 6 3 925 2 916 0.0 1419
MS.gene002376.t1 AT5G41770 23.077 403 248 14 437 815 94 458 4.12e-15 80.5
MS.gene002376.t1 AT5G41770 26.316 247 171 5 526 772 91 326 7.20e-15 79.7
MS.gene002376.t1 AT5G45990 25.726 241 161 6 526 762 77 303 8.22e-14 76.3
MS.gene002376.t1 AT5G45990 22.028 572 317 22 90 646 99 556 1.39e-12 72.0
MS.gene002376.t1 AT5G45990 23.866 419 251 18 375 768 58 433 8.99e-11 66.2
MS.gene002376.t1 AT5G45990 25.726 241 161 6 526 762 87 313 8.40e-14 76.3
MS.gene002376.t1 AT5G45990 22.028 572 317 22 90 646 109 566 1.48e-12 72.0
MS.gene002376.t1 AT5G45990 23.866 419 251 18 375 768 68 443 8.63e-11 66.2
MS.gene002376.t1 AT3G51110 27.731 238 157 8 528 762 72 297 7.24e-12 68.9

Find 209 sgRNAs with CRISPR-Local

Find 421 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCACATGTTAAAGATATT+TGG 0.110974 2.4:-71899380 MS.gene002376:CDS
GGAAGTTTATGAACGGATTT+TGG 0.151853 2.4:-71899619 MS.gene002376:CDS
GCTCGTGCTGCTGAGATATT+TGG 0.169951 2.4:-71896026 MS.gene002376:CDS
TGAATGTGGATGCCATTATT+AGG 0.198462 2.4:-71900691 MS.gene002376:CDS
TCACACAGCATGATAGAATT+TGG 0.202210 2.4:-71900982 MS.gene002376:CDS
GAGAAATGCTTCGAATTAAA+AGG 0.216135 2.4:-71895770 MS.gene002376:CDS
AATCAATTATGCATACTTTC+TGG 0.221520 2.4:-71899568 MS.gene002376:CDS
TGTTATTGAGCGTTTCAAAT+TGG 0.242989 2.4:+71901137 None:intergenic
AGCCTCCTTTAACTTGTCTT+TGG 0.243717 2.4:+71895575 None:intergenic
CTCTCTTGCTCTCTCCAATT+TGG 0.249601 2.4:+71899317 None:intergenic
CCTCCTCAAGATTCACTGTT+TGG 0.275998 2.4:+71895598 None:intergenic
CGCGGTCTGATCCAGACTTT+TGG 0.280355 2.4:-71895842 MS.gene002376:CDS
GTCGCTGCTTTGTCAACTGC+TGG 0.286285 2.4:+71895507 None:intergenic
TAACAAGCTTCTGCTGAGTT+AGG 0.292590 2.4:+71901050 None:intergenic
CTGCTGTAGCCCGCCTCATT+AGG 0.293063 2.4:+71899904 None:intergenic
CCCACATGTTAAAGATATTT+GGG 0.294465 2.4:-71899379 MS.gene002376:CDS
ATCAAAAGTTCTTCGCGTTC+TGG 0.301328 2.4:+71901027 None:intergenic
CTGGTAACTCAATTTCTTCA+TGG 0.301375 2.4:+71895409 None:intergenic
GGAGGAAAGTCTAGGTAGTT+TGG 0.315643 2.4:-71899652 MS.gene002376:CDS
CTCGTGCTGCTGAGATATTT+GGG 0.316400 2.4:-71896025 MS.gene002376:CDS
CCATTATTAGGGGTGGGATT+AGG 0.322234 2.4:-71900679 MS.gene002376:CDS
CTCATAGATCTCGCGTGTCT+TGG 0.324672 2.4:+71895998 None:intergenic
TTCCTCCAAATCAACATAAA+AGG 0.325686 2.4:+71899668 None:intergenic
ACCCCTTCAGTCTCAAACTA+TGG 0.330362 2.4:-71901315 MS.gene002376:CDS
TGAGGACGAAATGGCTGCTT+TGG 0.333805 2.4:-71895544 MS.gene002376:CDS
TCTAAATTTGTGAAGAGATA+TGG 0.334635 2.4:-71899345 MS.gene002376:CDS
GAATGTGGATGCCATTATTA+GGG 0.336700 2.4:-71900690 MS.gene002376:CDS
CACTTGCTGAGTATTATATT+AGG 0.343994 2.4:-71900622 MS.gene002376:CDS
TGCATAAAATGCCTAGGGTT+TGG 0.351156 2.4:-71901090 MS.gene002376:CDS
TGCCAGAGCTTATAGCTTCC+AGG 0.357475 2.4:+71901214 None:intergenic
GAGATATGGAAGGACCAAAT+TGG 0.360298 2.4:-71899331 MS.gene002376:CDS
CCTAATCCCACCCCTAATAA+TGG 0.360380 2.4:+71900679 None:intergenic
GTTATTGAGCGTTTCAAATT+GGG 0.365931 2.4:+71901138 None:intergenic
AGGTCTTCCCACTGCCTTCA+TGG 0.379853 2.4:+71900106 None:intergenic
GCAAGAGTCTGCTGAGAGAT+TGG 0.379997 2.4:-71900825 MS.gene002376:CDS
CGCGCTTTAAAAGCACTTCC+TGG 0.381097 2.4:-71901232 MS.gene002376:CDS
GGAGGCCAAAGACAAGTTAA+AGG 0.384243 2.4:-71895580 MS.gene002376:CDS
GTGAATCGGAACGTGCGATT+AGG 0.386476 2.4:+71901284 None:intergenic
CGGATGAGGTTGGTCGGTTG+TGG 0.389890 2.4:-71900649 MS.gene002376:CDS
TTATGCAACTTCATCTGAAC+TGG 0.395393 2.4:+71899708 None:intergenic
GTCCTTCTGCATCAGATACT+CGG 0.395780 2.4:+71895620 None:intergenic
TGCCAATCATTCCAAAAGTC+TGG 0.396584 2.4:+71895831 None:intergenic
AGCACACTATTAGCCAATTC+AGG 0.397578 2.4:+71900242 None:intergenic
AGCAGACTCTTGCCAAAGAC+TGG 0.403270 2.4:+71900835 None:intergenic
CTACAAAACTGTGGACAATC+TGG 0.403587 2.4:-71899991 MS.gene002376:CDS
GCTAAGCTGGAAGAGGACTA+TGG 0.403686 2.4:-71896137 MS.gene002376:CDS
GCGACAAAAGAGAGAAAAGT+TGG 0.405219 2.4:-71895489 MS.gene002376:CDS
TCTCCATTAGGTAGTCAAAC+CGG 0.409875 2.4:+71900270 None:intergenic
CACACAGCATGATAGAATTT+GGG 0.410332 2.4:-71900981 MS.gene002376:CDS
AATGGAGAGGAGGCCTGAAT+TGG 0.410428 2.4:-71900255 MS.gene002376:CDS
TATGAGCAGGCAATTGAATC+TGG 0.411600 2.4:-71895981 MS.gene002376:CDS
TGCATAAATCTTTGAGATTG+TGG 0.411982 2.4:-71899692 MS.gene002376:CDS
AATTCGAAGCATTTCTCTAA+AGG 0.413500 2.4:+71895776 None:intergenic
ATTCAGGCCTCCTCTCCATT+AGG 0.416193 2.4:+71900258 None:intergenic
GTGTTTGAAGTATGCTGAAC+TGG 0.419742 2.4:-71895931 MS.gene002376:CDS
AAAGCAGCCATTTCGTCCTC+AGG 0.421199 2.4:+71895546 None:intergenic
TCATAGATCTCGCGTGTCTT+GGG 0.427162 2.4:+71895999 None:intergenic
GGAAGACGAAACATAGGCTT+TGG 0.432217 2.4:-71900763 MS.gene002376:CDS
AGAGGTTTCACTTGATCAGC+TGG 0.433456 2.4:+71896173 None:intergenic
GGCCCGGTTTGACTACCTAA+TGG 0.434787 2.4:-71900273 MS.gene002376:CDS
TGCCACTGTTCAACATTATG+TGG 0.434788 2.4:+71900206 None:intergenic
GCATAATTGATTATTATTTG+TGG 0.437816 2.4:+71899579 None:intergenic
AGACCGCGGATCAGCAAACT+TGG 0.439667 2.4:+71895857 None:intergenic
TCGCTGCTTTGTCAACTGCT+GGG 0.441481 2.4:+71895508 None:intergenic
AACAAGCTTCTGCTGAGTTA+GGG 0.441523 2.4:+71901051 None:intergenic
AAAGTTGGGTTTGTAAGTGC+TGG 0.441888 2.4:-71895474 MS.gene002376:CDS
AGGCATGCAAATGAGGTGTC+AGG 0.444745 2.4:-71900716 MS.gene002376:CDS
GAAGATGAAGAAAATGAAGA+TGG 0.444861 2.4:-71900446 MS.gene002376:CDS
TCAAATTGGGAATGTGTGAT+TGG 0.448003 2.4:+71901151 None:intergenic
CAAATTGGGAATGTGTGATT+GGG 0.448611 2.4:+71901152 None:intergenic
GGAGAAGGAAGATGAGGAGG+AGG 0.449067 2.4:-71900417 MS.gene002376:CDS
GAAGGCTAGAGATGTGTTTG+AGG 0.450193 2.4:-71900585 MS.gene002376:CDS
ACCCTAAGCGAGGTTTCAAT+CGG 0.452899 2.4:+71900923 None:intergenic
GGCTAGTGTTTGGTGTGAGT+GGG 0.453351 2.4:-71899970 MS.gene002376:CDS
TGCTGAACTGGAAAGAAGCT+TGG 0.453727 2.4:-71895919 MS.gene002376:CDS
ATAAAATCCTCAATATGATT+CGG 0.458306 2.4:+71900875 None:intergenic
CTATCTGCAATATGCTAAGC+TGG 0.465578 2.4:-71896150 MS.gene002376:CDS
GAATGACATTGACTTGAGAT+TGG 0.465693 2.4:-71900294 MS.gene002376:CDS
TGGACAATCTGGCTAGTGTT+TGG 0.465917 2.4:-71899980 MS.gene002376:CDS
TGGGATCCCTGAGGACGAAA+TGG 0.466824 2.4:-71895553 MS.gene002376:CDS
TTACTATGCATAAAATGCCT+AGG 0.471939 2.4:-71901096 MS.gene002376:CDS
AAAGCCACCCATAGCGTATG+AGG 0.473239 2.4:+71900086 None:intergenic
CCCGATTGAAACCTCGCTTA+GGG 0.473530 2.4:-71900924 MS.gene002376:CDS
ATTCTATCATGCTGTGTGAC+AGG 0.476712 2.4:+71900986 None:intergenic
GAATGATTGGCATGAATTTG+AGG 0.478821 2.4:-71895820 MS.gene002376:CDS
AAAGACAAGTTAAAGGAGGC+TGG 0.480550 2.4:-71895573 MS.gene002376:CDS
GCTGAACTGGAAAGAAGCTT+GGG 0.489860 2.4:-71895918 MS.gene002376:CDS
TGAATCTGGTCTTCCAGATA+AGG 0.494012 2.4:-71895967 MS.gene002376:CDS
GACGAAACATAGGCTTTGGT+TGG 0.494038 2.4:-71900759 MS.gene002376:CDS
TGGCTAGTGTTTGGTGTGAG+TGG 0.497525 2.4:-71899971 MS.gene002376:CDS
GTTTGAGACTGAAGGGGTTG+CGG 0.499360 2.4:+71901320 None:intergenic
GGTCTTCCCACTGCCTTCAT+GGG 0.500810 2.4:+71900107 None:intergenic
TGTGAAGGAATTTAAGAAGA+CGG 0.501197 2.4:-71900345 MS.gene002376:CDS
TTGCTGAGTATTATATTAGG+AGG 0.504269 2.4:-71900619 MS.gene002376:CDS
TGCTGAGTATTATATTAGGA+GGG 0.507073 2.4:-71900618 MS.gene002376:CDS
TGAAGATGGGATGAAGGAGA+AGG 0.507911 2.4:-71900432 MS.gene002376:CDS
CATGAATTTGAGGTTCAACA+TGG 0.510628 2.4:-71895810 MS.gene002376:CDS
ACTAGCAAAGCGAGCTATGA+AGG 0.511003 2.4:-71896114 MS.gene002376:CDS
TCCCGATTGAAACCTCGCTT+AGG 0.511785 2.4:-71900925 MS.gene002376:CDS
TACTATGCATAAAATGCCTA+GGG 0.515600 2.4:-71901095 MS.gene002376:CDS
TCAGCTTCTTAATTCTCTCA+AGG 0.516234 2.4:+71895232 None:intergenic
TGGGAAGACCTCATACGCTA+TGG 0.517952 2.4:-71900094 MS.gene002376:CDS
TCAGTTGAGGTCAAACGAAA+AGG 0.518177 2.4:-71899876 MS.gene002376:intron
AGAAAATGAAGATGGGATGA+AGG 0.520414 2.4:-71900438 MS.gene002376:CDS
GTTTGAGAACGCAGTTGAAA+CGG 0.522364 2.4:-71899292 MS.gene002376:intron
TTGAAACATGAGAATTTCAA+AGG 0.522872 2.4:-71899936 MS.gene002376:CDS
TTTCGTTTGACCTCAACTGA+TGG 0.526632 2.4:+71899879 None:intergenic
GGAGACTTCGAACAATTTCG+AGG 0.527697 2.4:+71901173 None:intergenic
TGAGGTTCAACATGGAAATG+AGG 0.530360 2.4:-71895802 MS.gene002376:CDS
GAGGTTTCACTTGATCAGCT+GGG 0.530771 2.4:+71896174 None:intergenic
AGTTGTGTGATTTGCTGACT+AGG 0.530856 2.4:-71900736 MS.gene002376:CDS
CGATGTGGATGTTGACAAGA+AGG 0.534093 2.4:-71900372 MS.gene002376:CDS
AGATGATGGTGCAAAAGAGA+AGG 0.535525 2.4:-71895277 MS.gene002376:CDS
GAAGGAGAAGGAAGATGAGG+AGG 0.538350 2.4:-71900420 MS.gene002376:CDS
AAGATGAAGAAAATGAAGAT+GGG 0.539143 2.4:-71900445 MS.gene002376:CDS
CTCCATTAGGTAGTCAAACC+GGG 0.541182 2.4:+71900271 None:intergenic
CCCAAATATCTTTAACATGT+GGG 0.541285 2.4:+71899379 None:intergenic
CACCATAGTTTGAGACTGAA+GGG 0.541433 2.4:+71901313 None:intergenic
AAGGAGCACTTGACCTAATG+AGG 0.543926 2.4:-71899917 MS.gene002376:CDS
ACCCAAATATCTTTAACATG+TGG 0.544787 2.4:+71899378 None:intergenic
TAGGTAGTTTGGAGTCTACT+CGG 0.547270 2.4:-71899641 MS.gene002376:CDS
GCCACTGTTCAACATTATGT+GGG 0.547271 2.4:+71900207 None:intergenic
TTCCTGGAAGCTATAAGCTC+TGG 0.548539 2.4:-71901216 MS.gene002376:CDS
GTTGATTTGGAGGAAAGTCT+AGG 0.551528 2.4:-71899660 MS.gene002376:CDS
GCAATATGCTAAGCTGGAAG+AGG 0.552790 2.4:-71896144 MS.gene002376:CDS
CGCTGCTTTGTCAACTGCTG+GGG 0.553044 2.4:+71895509 None:intergenic
GACACGCGAGATCTATGAGC+AGG 0.553163 2.4:-71895994 MS.gene002376:CDS
CAGCTTCTTAATTCTCTCAA+GGG 0.553692 2.4:+71895233 None:intergenic
CGACAAAAGAGAGAAAAGTT+GGG 0.555367 2.4:-71895488 MS.gene002376:CDS
TTAGCATATTGCAGATAGAG+AGG 0.558079 2.4:+71896155 None:intergenic
CCGCGGATCAGCAAACTTGG+AGG 0.558477 2.4:+71895860 None:intergenic
GAAAATAATGAAGTAGATGA+TGG 0.560827 2.4:-71895291 MS.gene002376:CDS
TAGACGAGATCGTCTTCTGA+TGG 0.561308 2.4:+71901358 None:intergenic
AAGACAAGTTAAAGGAGGCT+GGG 0.562734 2.4:-71895572 MS.gene002376:CDS
GTGGATGCCATTATTAGGGG+TGG 0.563505 2.4:-71900686 MS.gene002376:CDS
TGGATGCCATTATTAGGGGT+GGG 0.563795 2.4:-71900685 MS.gene002376:CDS
TGGGTTTGTAAGTGCTGGAG+TGG 0.564629 2.4:-71895469 MS.gene002376:CDS
TAGGAGGGGTTTGCATGAGA+AGG 0.564810 2.4:-71900603 MS.gene002376:CDS
GCTGAGTATTATATTAGGAG+GGG 0.566420 2.4:-71900617 MS.gene002376:CDS
AAGGATAATGAAAGTCGGCT+TGG 0.567936 2.4:-71895258 MS.gene002376:CDS
TAAGTGAGAATCTGCTTAGT+CGG 0.570214 2.4:+71900155 None:intergenic
AGCACTTGACCTAATGAGGC+GGG 0.570858 2.4:-71899913 MS.gene002376:CDS
TGTTGATCCCATGAAGGCAG+TGG 0.572215 2.4:-71900114 MS.gene002376:CDS
GGCTAGAGATGTGTTTGAGG+AGG 0.573208 2.4:-71900582 MS.gene002376:CDS
TGTCTCTGCAAGCTACAGCC+AGG 0.577332 2.4:-71895745 MS.gene002376:intron
CCACCATAGTTTGAGACTGA+AGG 0.578856 2.4:+71901312 None:intergenic
CCCTAAGCGAGGTTTCAATC+GGG 0.579790 2.4:+71900924 None:intergenic
ATAATGTTGAACAGTGGCAC+CGG 0.581022 2.4:-71900202 MS.gene002376:CDS
GATCGTCTTCTGATGGGTAG+AGG 0.581259 2.4:+71901365 None:intergenic
CCTCCAAGTTTGCTGATCCG+CGG 0.581633 2.4:-71895860 MS.gene002376:CDS
GTCGACTGTTATTACTGTGA+GGG 0.582283 2.4:-71900555 MS.gene002376:CDS
TCCTTCTGCATCAGATACTC+GGG 0.585287 2.4:+71895621 None:intergenic
GGGAAGACCTCATACGCTAT+GGG 0.587279 2.4:-71900093 MS.gene002376:CDS
GGCAAATACATATACTCCAC+GGG 0.587629 2.4:+71895881 None:intergenic
GCTGACTAGGCATGCAAATG+AGG 0.588389 2.4:-71900723 MS.gene002376:CDS
TGACAAGAAGGAATTTGTGA+AGG 0.589340 2.4:-71900360 MS.gene002376:CDS
GTGGAATCACAGTCCGATGG+AGG 0.589725 2.4:-71895450 MS.gene002376:CDS
GATGAAGGAGAAGGAAGATG+AGG 0.590002 2.4:-71900423 MS.gene002376:CDS
TACAGCAGAGCCATCAGTTG+AGG 0.591172 2.4:-71899889 MS.gene002376:CDS
ATTGATTATTATTTGTGGTG+TGG 0.594022 2.4:+71899584 None:intergenic
GTATGATCCGAATCATATTG+AGG 0.595662 2.4:-71900882 MS.gene002376:CDS
GGCATGCAAATGAGGTGTCA+GGG 0.596852 2.4:-71900715 MS.gene002376:CDS
AGACGAGATCGTCTTCTGAT+GGG 0.597950 2.4:+71901359 None:intergenic
TTTATCATCATTCAAAACAG+AGG 0.598242 2.4:+71900802 None:intergenic
AGGTAGTTTGGAGTCTACTC+GGG 0.598887 2.4:-71899640 MS.gene002376:CDS
AGGTTTCACTTGATCAGCTG+GGG 0.601983 2.4:+71896175 None:intergenic
ACGAAATGGCTGCTTTGGAA+AGG 0.602105 2.4:-71895539 MS.gene002376:CDS
TTAAGGGGAAGACGAAACAT+AGG 0.608893 2.4:-71900769 MS.gene002376:CDS
AAGCAGCCATTTCGTCCTCA+GGG 0.611046 2.4:+71895547 None:intergenic
TGTTCGTTTCAAATTCGATG+TGG 0.611353 2.4:-71900387 MS.gene002376:CDS
ATGTTGAACAGTGGCACCGG+AGG 0.613836 2.4:-71900199 MS.gene002376:CDS
AGATACATAATCCAAACCCT+AGG 0.614428 2.4:+71901079 None:intergenic
GTTGATCCCATGAAGGCAGT+GGG 0.622072 2.4:-71900113 MS.gene002376:CDS
GGAGTGGAATCACAGTCCGA+TGG 0.622467 2.4:-71895453 MS.gene002376:CDS
AAGAGAAGGATAATGAAAGT+CGG 0.622772 2.4:-71895263 MS.gene002376:CDS
TCGTGCTGCTGAGATATTTG+GGG 0.624588 2.4:-71896024 MS.gene002376:CDS
GCTAGAGATGTGTTTGAGGA+GGG 0.625559 2.4:-71900581 MS.gene002376:CDS
GGAGAAATTGAACGTGCCCG+TGG 0.629146 2.4:-71895897 MS.gene002376:CDS
ACATTGACTTGAGATTGGCC+CGG 0.629436 2.4:-71900289 MS.gene002376:CDS
CAATTTCGAGGCGCTCACGA+AGG 0.629966 2.4:+71901185 None:intergenic
CAATTATGCATACTTTCTGG+AGG 0.631440 2.4:-71899565 MS.gene002376:intron
AGGCAAATACATATACTCCA+CGG 0.634626 2.4:+71895880 None:intergenic
CTACTCGGGAAGTTTATGAA+CGG 0.635173 2.4:-71899626 MS.gene002376:CDS
CCTCGCTTAGGGTTTATCGT+AGG 0.637661 2.4:-71900913 MS.gene002376:CDS
TAAGCAGATTCTCACTTACA+CGG 0.648613 2.4:-71900150 MS.gene002376:CDS
GAGCACTTGACCTAATGAGG+CGG 0.648970 2.4:-71899914 MS.gene002376:CDS
ACCATAGTTTGAGACTGAAG+GGG 0.649422 2.4:+71901314 None:intergenic
TTGACTACCTAATGGAGAGG+AGG 0.649463 2.4:-71900265 MS.gene002376:CDS
TGGAATCACAGTCCGATGGA+GGG 0.650024 2.4:-71895449 MS.gene002376:CDS
CCTTCAGTCTCAAACTATGG+TGG 0.650162 2.4:-71901312 MS.gene002376:CDS
TGTTGAACAGTGGCACCGGA+GGG 0.653564 2.4:-71900198 MS.gene002376:CDS
GCCCGAGTATCTGATGCAGA+AGG 0.655224 2.4:-71895622 MS.gene002376:CDS
GGCCAAAGACAAGTTAAAGG+AGG 0.656443 2.4:-71895577 MS.gene002376:CDS
TGAGGTGTCAGGGTTGAATG+TGG 0.664619 2.4:-71900705 MS.gene002376:CDS
GGACCAAACAGTGAATCTTG+AGG 0.666439 2.4:-71895601 MS.gene002376:CDS
AAGACCTCATACGCTATGGG+TGG 0.674575 2.4:-71900090 MS.gene002376:CDS
CCAAACAGTGAATCTTGAGG+AGG 0.675893 2.4:-71895598 MS.gene002376:CDS
TCACTTACACGGAGGCTGTG+AGG 0.682337 2.4:-71900139 MS.gene002376:CDS
AATGTGGATGCCATTATTAG+GGG 0.684249 2.4:-71900689 MS.gene002376:CDS
TGTCGACTGTTATTACTGTG+AGG 0.687125 2.4:-71900556 MS.gene002376:CDS
GGTTTGACTACCTAATGGAG+AGG 0.691078 2.4:-71900268 MS.gene002376:CDS
CAAAAGTCTGGATCAGACCG+CGG 0.698770 2.4:+71895843 None:intergenic
GCAGGTGAACTACAAAACTG+TGG 0.704989 2.4:-71900000 MS.gene002376:CDS
GAGGACTGTTGATCCCATGA+AGG 0.709712 2.4:-71900120 MS.gene002376:CDS
ACCCACATAATGTTGAACAG+TGG 0.718614 2.4:-71900208 MS.gene002376:CDS
AAAGGAGGCTGGGATCCCTG+AGG 0.730747 2.4:-71895562 MS.gene002376:CDS
AATTTGTGAAGAGATATGGA+AGG 0.730753 2.4:-71899341 MS.gene002376:CDS
CCTACGATAAACCCTAAGCG+AGG 0.735157 2.4:+71900913 None:intergenic
GCAGATTCTCACTTACACGG+AGG 0.789180 2.4:-71900147 MS.gene002376:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTAATTTTTTTTTT+TGG - chr2.4:71896802-71896821 MS.gene002376:intron 0.0%
!!! TGTAATTATAATATTTTGTA+TGG - chr2.4:71897515-71897534 MS.gene002376:intron 10.0%
!! AAAAAAATTGATATGTTATG+TGG + chr2.4:71899357-71899376 None:intergenic 15.0%
!! AAAAAATTGATATGTTATGT+GGG + chr2.4:71899356-71899375 None:intergenic 15.0%
!! ATCTATAAATGAATGTAAAA+TGG + chr2.4:71897944-71897963 None:intergenic 15.0%
!! CATATTGTGAAAAATAAAAT+GGG + chr2.4:71896776-71896795 None:intergenic 15.0%
!! GTTATATCATAATCTATATT+GGG + chr2.4:71900087-71900106 None:intergenic 15.0%
!! TAGATTATGATATAACATTA+TGG - chr2.4:71900091-71900110 MS.gene002376:CDS 15.0%
!! TATTAAATACACAACTTATT+CGG - chr2.4:71899541-71899560 MS.gene002376:intron 15.0%
!! TGTTATATCATAATCTATAT+TGG + chr2.4:71900088-71900107 None:intergenic 15.0%
!! TTATGTAGAATTTATTGAAT+TGG - chr2.4:71898372-71898391 MS.gene002376:intron 15.0%
!!! ATAAATTTTATTCGATTAAG+GGG - chr2.4:71895822-71895841 MS.gene002376:CDS 15.0%
!!! GATAAATTTTATTCGATTAA+GGG - chr2.4:71895821-71895840 MS.gene002376:CDS 15.0%
!!! GATTTAGAAATTGATTTTTT+TGG + chr2.4:71898251-71898270 None:intergenic 15.0%
!!! GATTTTATATCATTTAATGT+GGG + chr2.4:71898065-71898084 None:intergenic 15.0%
!!! TAAATGATTTTGATTTATGT+AGG - chr2.4:71897143-71897162 MS.gene002376:intron 15.0%
!!! TGATAAATTTTATTCGATTA+AGG - chr2.4:71895820-71895839 MS.gene002376:CDS 15.0%
!!! TGATTTTATATCATTTAATG+TGG + chr2.4:71898066-71898085 None:intergenic 15.0%
!!! TTAAAATAACTAAAGTTTTC+AGG + chr2.4:71897570-71897589 None:intergenic 15.0%
!! AAAAATTGATATGTTATGTG+GGG + chr2.4:71899355-71899374 None:intergenic 20.0%
!! AAATGAAGAAAATAATCATG+AGG + chr2.4:71898540-71898559 None:intergenic 20.0%
!! AAATTACAAAGAATAGTTGA+AGG + chr2.4:71897762-71897781 None:intergenic 20.0%
!! AACTAAGTATAAATAACACA+AGG - chr2.4:71898673-71898692 MS.gene002376:intron 20.0%
!! ATAAAATCCTCAATATGATT+CGG + chr2.4:71895734-71895753 None:intergenic 20.0%
!! ATAAAGAATTGTTCTTTGAT+GGG - chr2.4:71899480-71899499 MS.gene002376:intron 20.0%
!! ATATATAGATAGAAGAAGTA+TGG + chr2.4:71898601-71898620 None:intergenic 20.0%
!! ATGACAGTAAAGAAAATATT+AGG - chr2.4:71900034-71900053 MS.gene002376:CDS 20.0%
!! CTATCTATATATACATATGT+GGG - chr2.4:71898609-71898628 MS.gene002376:intron 20.0%
!! GCATAATTGATTATTATTTG+TGG + chr2.4:71897030-71897049 None:intergenic 20.0%
!! GCATATTGTGAAAAATAAAA+TGG + chr2.4:71896777-71896796 None:intergenic 20.0%
!! TCTATCTATATATACATATG+TGG - chr2.4:71898608-71898627 MS.gene002376:intron 20.0%
!! TGAATATATTAATGGAAATC+TGG + chr2.4:71898517-71898536 None:intergenic 20.0%
!! TTAGATTGAATGAATTGATT+TGG - chr2.4:71897604-71897623 MS.gene002376:intron 20.0%
!! TTATGTTGAATTGTATAAAC+CGG + chr2.4:71897684-71897703 None:intergenic 20.0%
!!! ATTTGTTATCACCAAAATAT+AGG - chr2.4:71898752-71898771 MS.gene002376:intron 20.0%
!!! GTGTTATTTATACTTAGTTT+TGG + chr2.4:71898672-71898691 None:intergenic 20.0%
!!! GTTATTTTAACATAAAGCAT+TGG - chr2.4:71897580-71897599 MS.gene002376:intron 20.0%
!!! TATATTTTACATTACACTCT+AGG + chr2.4:71899881-71899900 None:intergenic 20.0%
!!! TGAACTGTTTCTAAAATTAA+AGG + chr2.4:71899691-71899710 None:intergenic 20.0%
!!! TGTTTTTATACCCTATATTT+TGG + chr2.4:71898766-71898785 None:intergenic 20.0%
!!! TTCATTTTGACAACAAAAAT+AGG + chr2.4:71900004-71900023 None:intergenic 20.0%
!!! TTCTTTTTATTTGTTCTTTC+TGG - chr2.4:71898997-71899016 MS.gene002376:intron 20.0%
!!! TTTAAGTACAATATCTCTTT+TGG - chr2.4:71897082-71897101 MS.gene002376:intron 20.0%
!!! TTTGTTATCACCAAAATATA+GGG - chr2.4:71898753-71898772 MS.gene002376:intron 20.0%
!!! TTTTAGAAACAGTTCAATTT+AGG - chr2.4:71899695-71899714 MS.gene002376:CDS 20.0%
! AAAATTGATATGTTATGTGG+GGG + chr2.4:71899354-71899373 None:intergenic 25.0%
! AAGATGAAGAAAATGAAGAT+GGG - chr2.4:71896161-71896180 MS.gene002376:CDS 25.0%
! AATAAAAAGAAGATGAAACC+TGG + chr2.4:71898988-71899007 None:intergenic 25.0%
! AATCAATTATGCATACTTTC+TGG - chr2.4:71897038-71897057 MS.gene002376:intron 25.0%
! ATATGATCATATGACTATGA+AGG + chr2.4:71899052-71899071 None:intergenic 25.0%
! ATTGATTATTATTTGTGGTG+TGG + chr2.4:71897025-71897044 None:intergenic 25.0%
! CAAAGAACAATTCTTTATCT+TGG + chr2.4:71899478-71899497 None:intergenic 25.0%
! CTTCATTTCACTAGATATAT+TGG - chr2.4:71899201-71899220 MS.gene002376:intron 25.0%
! GAAAATAATGAAGTAGATGA+TGG - chr2.4:71901315-71901334 MS.gene002376:CDS 25.0%
! GATAAAGAATTGTTCTTTGA+TGG - chr2.4:71899479-71899498 MS.gene002376:intron 25.0%
! TAGATTCTCAATTCTGTTAT+AGG - chr2.4:71897959-71897978 MS.gene002376:intron 25.0%
! TCATGAGGTGAATATATTAA+TGG + chr2.4:71898525-71898544 None:intergenic 25.0%
! TCCATATAGAATAGTGAAAA+AGG + chr2.4:71898015-71898034 None:intergenic 25.0%
! TCTAAATTTGTGAAGAGATA+TGG - chr2.4:71897261-71897280 MS.gene002376:intron 25.0%
! TTGAAACATGAGAATTTCAA+AGG - chr2.4:71896670-71896689 MS.gene002376:intron 25.0%
! TTGTGTATTTAATATGCAAG+TGG + chr2.4:71899535-71899554 None:intergenic 25.0%
! TTTATCATCATTCAAAACAG+AGG + chr2.4:71895807-71895826 None:intergenic 25.0%
!! AAAAGCAGAAAATTGATGAT+GGG + chr2.4:71897492-71897511 None:intergenic 25.0%
!! AGATTTAGAGTTTAATGAGT+TGG - chr2.4:71900059-71900078 MS.gene002376:CDS 25.0%
!! ATCATAACTAGTATTTTCCT+TGG - chr2.4:71900272-71900291 MS.gene002376:CDS 25.0%
!! ATGCTTAACTTTTCATTGTT+TGG + chr2.4:71900544-71900563 None:intergenic 25.0%
!! GAAAATTTGAGACATCAAAT+GGG + chr2.4:71898188-71898207 None:intergenic 25.0%
!! TATAGGAAATTGACTCTAAA+AGG - chr2.4:71897976-71897995 MS.gene002376:intron 25.0%
!! TCATGTCAAGGTATTATTAA+AGG - chr2.4:71898337-71898356 MS.gene002376:intron 25.0%
!! TGAAAATTTGAGACATCAAA+TGG + chr2.4:71898189-71898208 None:intergenic 25.0%
!! TTTTCATTGTAAAACCTCAA+TGG - chr2.4:71898203-71898222 MS.gene002376:intron 25.0%
!!! ATACTTTGAAGATGCTTTTA+AGG - chr2.4:71897173-71897192 MS.gene002376:intron 25.0%
!!! ATGCTTTTAAGGTTTATGAA+AGG - chr2.4:71897184-71897203 MS.gene002376:intron 25.0%
!!! TCCTTTTTCACTATTCTATA+TGG - chr2.4:71898011-71898030 MS.gene002376:intron 25.0%
!!! TGCTTTTAAGGTTTATGAAA+GGG - chr2.4:71897185-71897204 MS.gene002376:intron 25.0%
!!! TTGTTTTTCGTTAGTCAAAA+GGG - chr2.4:71895656-71895675 MS.gene002376:intron 25.0%
!!! TTTGTTTTTCGTTAGTCAAA+AGG - chr2.4:71895655-71895674 MS.gene002376:intron 25.0%
!!! TTTTGATTAATTCCAGTCTT+TGG - chr2.4:71895759-71895778 MS.gene002376:CDS 25.0%
AAAATTAGCAAAGTATGTGC+TGG - chr2.4:71898641-71898660 MS.gene002376:intron 30.0%
AAATTGATATGTTATGTGGG+GGG + chr2.4:71899353-71899372 None:intergenic 30.0%
AAGAGAAGGATAATGAAAGT+CGG - chr2.4:71901343-71901362 MS.gene002376:CDS 30.0%
AAGCAAGCTTAAGAATTTCT+TGG - chr2.4:71899237-71899256 MS.gene002376:intron 30.0%
AATTTGTGAAGAGATATGGA+AGG - chr2.4:71897265-71897284 MS.gene002376:intron 30.0%
ACATTAGACTTGATGAAATC+TGG - chr2.4:71898443-71898462 MS.gene002376:intron 30.0%
ACCCAAATATCTTTAACATG+TGG + chr2.4:71897231-71897250 None:intergenic 30.0%
ACCCACATGTTAAAGATATT+TGG - chr2.4:71897226-71897245 MS.gene002376:intron 30.0%
AGCAAGCTTAAGAATTTCTT+GGG - chr2.4:71899238-71899257 MS.gene002376:intron 30.0%
ATAAAAACAGCATCTCTGTA+AGG - chr2.4:71898777-71898796 MS.gene002376:intron 30.0%
ATAGATCATTACAAGTCCTA+AGG + chr2.4:71898872-71898891 None:intergenic 30.0%
ATCGAAACATTATAGTAACC+TGG + chr2.4:71900882-71900901 None:intergenic 30.0%
ATGCAAACGAATCAATGATA+AGG + chr2.4:71900919-71900938 None:intergenic 30.0%
ATTACTCTAACAGAATGCAA+AGG + chr2.4:71897902-71897921 None:intergenic 30.0%
CCCAAATATCTTTAACATGT+GGG + chr2.4:71897230-71897249 None:intergenic 30.0%
CCCACATGTTAAAGATATTT+GGG - chr2.4:71897227-71897246 MS.gene002376:intron 30.0%
GAAAAGCAGAAAATTGATGA+TGG + chr2.4:71897493-71897512 None:intergenic 30.0%
GAAGATGAAGAAAATGAAGA+TGG - chr2.4:71896160-71896179 MS.gene002376:CDS 30.0%
GAGAAATGCTTCGAATTAAA+AGG - chr2.4:71900836-71900855 MS.gene002376:CDS 30.0%
GGTCATATAGAAAATATCAC+AGG + chr2.4:71897471-71897490 None:intergenic 30.0%
GTTATTGAGCGTTTCAAATT+GGG + chr2.4:71895471-71895490 None:intergenic 30.0%
TAAAAACAGCATCTCTGTAA+GGG - chr2.4:71898778-71898797 MS.gene002376:intron 30.0%
TACTATGCATAAAATGCCTA+GGG - chr2.4:71895511-71895530 MS.gene002376:CDS 30.0%
TATATTCAATTACCCAGCTT+TGG + chr2.4:71898946-71898965 None:intergenic 30.0%
TGCTGAGTATTATATTAGGA+GGG - chr2.4:71895988-71896007 MS.gene002376:CDS 30.0%
TGTGAAGGAATTTAAGAAGA+CGG - chr2.4:71896261-71896280 MS.gene002376:intron 30.0%
TGTTATTGAGCGTTTCAAAT+TGG + chr2.4:71895472-71895491 None:intergenic 30.0%
TTACTATGCATAAAATGCCT+AGG - chr2.4:71895510-71895529 MS.gene002376:CDS 30.0%
TTAGAACTATGACTTCCAAA+GGG + chr2.4:71899291-71899310 None:intergenic 30.0%
TTCCTCCAAATCAACATAAA+AGG + chr2.4:71896941-71896960 None:intergenic 30.0%
TTCTAAGCAATATGTGATTG+TGG - chr2.4:71899305-71899324 MS.gene002376:CDS 30.0%
TTGCTGAGTATTATATTAGG+AGG - chr2.4:71895987-71896006 MS.gene002376:CDS 30.0%
TTTGACAACAAAAATAGGTG+CGG + chr2.4:71899999-71900018 None:intergenic 30.0%
TTTGTTCATTTCATTGTCTG+TGG - chr2.4:71898415-71898434 MS.gene002376:intron 30.0%
! AAAACCAAAGTGATGTCTTT+TGG + chr2.4:71899747-71899766 None:intergenic 30.0%
! AATTCGAAGCATTTCTCTAA+AGG + chr2.4:71900833-71900852 None:intergenic 30.0%
! CAAGCTCTAACATAAGAAAT+CGG + chr2.4:71897796-71897815 None:intergenic 30.0%
! CACTTGCTGAGTATTATATT+AGG - chr2.4:71895984-71896003 MS.gene002376:CDS 30.0%
! TCTATGACAAGATCTTTTGA+GGG + chr2.4:71899426-71899445 None:intergenic 30.0%
! TCTTTTGGATTTTACTCTGA+TGG - chr2.4:71897097-71897116 MS.gene002376:intron 30.0%
! TTCTATGACAAGATCTTTTG+AGG + chr2.4:71899427-71899446 None:intergenic 30.0%
!! ATTTTGGTGATAACAAATGC+AGG + chr2.4:71898750-71898769 None:intergenic 30.0%
!! TGAATTGGTTTGAGAGTTAA+GGG - chr2.4:71898387-71898406 MS.gene002376:intron 30.0%
!! TGCATAAATCTTTGAGATTG+TGG - chr2.4:71896914-71896933 MS.gene002376:intron 30.0%
!! TGCTAACACAATTTGCTTTT+TGG - chr2.4:71900388-71900407 MS.gene002376:CDS 30.0%
!! TTAAGAAGACGGTTTTATCT+GGG - chr2.4:71896272-71896291 MS.gene002376:intron 30.0%
!! TTGAATTGGTTTGAGAGTTA+AGG - chr2.4:71898386-71898405 MS.gene002376:intron 30.0%
!! TTTAAGAAGACGGTTTTATC+TGG - chr2.4:71896271-71896290 MS.gene002376:intron 30.0%
!! TTTTTGGTGTGTTTGTTGAA+TGG - chr2.4:71896818-71896837 MS.gene002376:intron 30.0%
!!! ATAGTTTTGACATCCTTATC+TGG + chr2.4:71900655-71900674 None:intergenic 30.0%
!!! ATATTCTGCGTTACTTTTAG+TGG - chr2.4:71896858-71896877 MS.gene002376:intron 30.0%
!!! ATTAGTTTTTATCCCTCCAT+CGG + chr2.4:71901172-71901191 None:intergenic 30.0%
!!! CTTTTGGTTCTCACTATAAT+GGG + chr2.4:71899731-71899750 None:intergenic 30.0%
!!! GCTTTGTCTAGTTTTGAATT+TGG + chr2.4:71898089-71898108 None:intergenic 30.0%
!!! GCTTTTAAGGTTTATGAAAG+GGG - chr2.4:71897186-71897205 MS.gene002376:intron 30.0%
!!! TCTTTTGGTTCTCACTATAA+TGG + chr2.4:71899732-71899751 None:intergenic 30.0%
AAAGCAAAAGAGGACAATGT+TGG + chr2.4:71899851-71899870 None:intergenic 35.0%
AACAACACTTGCATTAACTG+TGG - chr2.4:71899787-71899806 MS.gene002376:intron 35.0%
AATGAGCTTGTGATGCAAAA+TGG + chr2.4:71897871-71897890 None:intergenic 35.0%
AATGTGGATGCCATTATTAG+GGG - chr2.4:71895917-71895936 MS.gene002376:CDS 35.0%
AGAAAATGAAGATGGGATGA+AGG - chr2.4:71896168-71896187 MS.gene002376:CDS 35.0%
AGAACCAAAAGACATCACTT+TGG - chr2.4:71899740-71899759 MS.gene002376:intron 35.0%
AGAATGTTTCTCTGGTATGT+TGG - chr2.4:71899103-71899122 MS.gene002376:intron 35.0%
AGATACATAATCCAAACCCT+AGG + chr2.4:71895530-71895549 None:intergenic 35.0%
AGGATTACCAAAAGCAAAAG+AGG + chr2.4:71899861-71899880 None:intergenic 35.0%
AGGCAAATACATATACTCCA+CGG + chr2.4:71900729-71900748 None:intergenic 35.0%
CAAATTGGGAATGTGTGATT+GGG + chr2.4:71895457-71895476 None:intergenic 35.0%
CAAGCTTAAGAATTTCTTGG+GGG - chr2.4:71899240-71899259 MS.gene002376:intron 35.0%
CAATTATGCATACTTTCTGG+AGG - chr2.4:71897041-71897060 MS.gene002376:intron 35.0%
CACACAGCATGATAGAATTT+GGG - chr2.4:71895625-71895644 MS.gene002376:CDS 35.0%
CAGCATTTAGACAGTGAATA+TGG - chr2.4:71897722-71897741 MS.gene002376:intron 35.0%
CAGCTTCTTAATTCTCTCAA+GGG + chr2.4:71901376-71901395 None:intergenic 35.0%
CATTGTAAAACCTCAATGGA+TGG - chr2.4:71898207-71898226 MS.gene002376:intron 35.0%
CGACAAAAGAGAGAAAAGTT+GGG - chr2.4:71901118-71901137 MS.gene002376:CDS 35.0%
CTGAATTGAACCAAACTCTA+CGG + chr2.4:71899623-71899642 None:intergenic 35.0%
CTGGTAACTCAATTTCTTCA+TGG + chr2.4:71901200-71901219 None:intergenic 35.0%
CTTAGAACTATGACTTCCAA+AGG + chr2.4:71899292-71899311 None:intergenic 35.0%
GAATGATTGGCATGAATTTG+AGG - chr2.4:71900786-71900805 MS.gene002376:CDS 35.0%
GAATGTGGATGCCATTATTA+GGG - chr2.4:71895916-71895935 MS.gene002376:CDS 35.0%
GCAAGCTTAAGAATTTCTTG+GGG - chr2.4:71899239-71899258 MS.gene002376:intron 35.0%
GCATAGAAACATATTGAACC+AGG - chr2.4:71898967-71898986 MS.gene002376:intron 35.0%
GCTGAGTATTATATTAGGAG+GGG - chr2.4:71895989-71896008 MS.gene002376:CDS 35.0%
GTATGATCCGAATCATATTG+AGG - chr2.4:71895724-71895743 MS.gene002376:intron 35.0%
GTCAAAAATAACTCGAGCAT+TGG + chr2.4:71896578-71896597 None:intergenic 35.0%
TAAGCAGATTCTCACTTACA+CGG - chr2.4:71896456-71896475 MS.gene002376:intron 35.0%
TAAGTGAGAATCTGCTTAGT+CGG + chr2.4:71896454-71896473 None:intergenic 35.0%
TATTCTTTATCACAGTGAGC+AGG - chr2.4:71898567-71898586 MS.gene002376:intron 35.0%
TCAAATTGGGAATGTGTGAT+TGG + chr2.4:71895458-71895477 None:intergenic 35.0%
TCACACAGCATGATAGAATT+TGG - chr2.4:71895624-71895643 MS.gene002376:CDS 35.0%
TCACATACTACAATGAACCA+AGG + chr2.4:71900292-71900311 None:intergenic 35.0%
TCAGCTTCTTAATTCTCTCA+AGG + chr2.4:71901377-71901396 None:intergenic 35.0%
TGAATGTGGATGCCATTATT+AGG - chr2.4:71895915-71895934 MS.gene002376:CDS 35.0%
TGACAAGAAGGAATTTGTGA+AGG - chr2.4:71896246-71896265 MS.gene002376:intron 35.0%
TGATCCGTAAGATTAGGTAA+TGG - chr2.4:71898906-71898925 MS.gene002376:intron 35.0%
TGTTCGTTTCAAATTCGATG+TGG - chr2.4:71896219-71896238 MS.gene002376:intron 35.0%
TTAGCATATTGCAGATAGAG+AGG + chr2.4:71900454-71900473 None:intergenic 35.0%
TTATGCAACTTCATCTGAAC+TGG + chr2.4:71896901-71896920 None:intergenic 35.0%
TTATTCGGATGTTTGCAATC+AGG - chr2.4:71899556-71899575 MS.gene002376:intron 35.0%
! AATTTGAGACATCAAATGGG+AGG + chr2.4:71898185-71898204 None:intergenic 35.0%
! ACATTGTCCTCTTTTGCTTT+TGG - chr2.4:71899851-71899870 MS.gene002376:intron 35.0%
! CATGAATTTGAGGTTCAACA+TGG - chr2.4:71900796-71900815 MS.gene002376:CDS 35.0%
! GCTTTTATAAAGCCAAAGCT+GGG - chr2.4:71898931-71898950 MS.gene002376:intron 35.0%
! GGATTTTACTCTGATGGTTT+TGG - chr2.4:71897103-71897122 MS.gene002376:intron 35.0%
! GTTAATGCAAGTGTTGTTCA+TGG + chr2.4:71899785-71899804 None:intergenic 35.0%
! TGTTGACTAAGATCATGTCA+AGG - chr2.4:71898325-71898344 MS.gene002376:intron 35.0%
!! ACAAGATCTTTTGAGGGAAA+AGG + chr2.4:71899420-71899439 None:intergenic 35.0%
!! ATCTTTTGAGGGAAAAGGTT+TGG + chr2.4:71899415-71899434 None:intergenic 35.0%
!! ATGATGAAGCGCTTTTTGAA+AGG + chr2.4:71895347-71895366 None:intergenic 35.0%
!! CCGCTTCTAAAACTAAAGAA+CGG + chr2.4:71899661-71899680 None:intergenic 35.0%
!! CGCTTCTAAAACTAAAGAAC+GGG + chr2.4:71899660-71899679 None:intergenic 35.0%
!! GAATGACATTGACTTGAGAT+TGG - chr2.4:71896312-71896331 MS.gene002376:intron 35.0%
!! GAATTGGTTTGAGAGTTAAG+GGG - chr2.4:71898388-71898407 MS.gene002376:intron 35.0%
!! GAGTATGCTTGCTTTTAAGA+TGG - chr2.4:71896114-71896133 MS.gene002376:CDS 35.0%
!! GCTTCTAAAACTAAAGAACG+GGG + chr2.4:71899659-71899678 None:intergenic 35.0%
!! GGAAGTTTATGAACGGATTT+TGG - chr2.4:71896987-71897006 MS.gene002376:intron 35.0%
!! GTGGACCTTTTATGTTGATT+TGG - chr2.4:71896933-71896952 MS.gene002376:intron 35.0%
!! TCATCAGAGTCATTTTCTTC+TGG + chr2.4:71901219-71901238 None:intergenic 35.0%
!! TTTTAAGAAGCAGATGATGG+TGG - chr2.4:71898834-71898853 MS.gene002376:intron 35.0%
!!! ATCCAGACTTTTGGAATGAT+TGG - chr2.4:71900773-71900792 MS.gene002376:CDS 35.0%
!!! CCGTTCTTTAGTTTTAGAAG+CGG - chr2.4:71899658-71899677 MS.gene002376:CDS 35.0%
!!! GACCTTTTATGTTGATTTGG+AGG - chr2.4:71896936-71896955 MS.gene002376:intron 35.0%
!!! GAGTTTTAAGAAGCAGATGA+TGG - chr2.4:71898831-71898850 MS.gene002376:intron 35.0%
!!! TATGCTTGCTTTTAAGATGG+AGG - chr2.4:71896117-71896136 MS.gene002376:CDS 35.0%
!!! TGCTCGAGTTATTTTTGACA+AGG - chr2.4:71896579-71896598 MS.gene002376:intron 35.0%
!!! TGCTTTTAAGATGGAGGATA+TGG - chr2.4:71896123-71896142 MS.gene002376:CDS 35.0%
AAAGACAAGTTAAAGGAGGC+TGG - chr2.4:71901033-71901052 MS.gene002376:CDS 40.0%
AAAGTTGGGTTTGTAAGTGC+TGG - chr2.4:71901132-71901151 MS.gene002376:CDS 40.0%
AACAAGCTTCTGCTGAGTTA+GGG + chr2.4:71895558-71895577 None:intergenic 40.0%
AAGACAAGTTAAAGGAGGCT+GGG - chr2.4:71901034-71901053 MS.gene002376:CDS 40.0%
AAGGATAATGAAAGTCGGCT+TGG - chr2.4:71901348-71901367 MS.gene002376:CDS 40.0%
AATGGCGAAGTCTGTCAAAA+TGG + chr2.4:71897926-71897945 None:intergenic 40.0%
ACAGTGTCTTCTTTACTCTC+CGG - chr2.4:71897662-71897681 MS.gene002376:intron 40.0%
ACCCACATAATGTTGAACAG+TGG - chr2.4:71896398-71896417 MS.gene002376:intron 40.0%
ACGAATCAATGATAAGGCTC+AGG + chr2.4:71900913-71900932 None:intergenic 40.0%
AGCACACTATTAGCCAATTC+AGG + chr2.4:71896367-71896386 None:intergenic 40.0%
AGCAGCACAAAGATATATGC+AGG + chr2.4:71898273-71898292 None:intergenic 40.0%
ATAATGTTGAACAGTGGCAC+CGG - chr2.4:71896404-71896423 MS.gene002376:intron 40.0%
ATCAAAAGTTCTTCGCGTTC+TGG + chr2.4:71895582-71895601 None:intergenic 40.0%
ATGGATGGTGAGTTCTCATA+TGG - chr2.4:71898222-71898241 MS.gene002376:intron 40.0%
ATTCTATCATGCTGTGTGAC+AGG + chr2.4:71895623-71895642 None:intergenic 40.0%
CTACAAAACTGTGGACAATC+TGG - chr2.4:71896615-71896634 MS.gene002376:intron 40.0%
CTACTCGGGAAGTTTATGAA+CGG - chr2.4:71896980-71896999 MS.gene002376:intron 40.0%
CTATCTGCAATATGCTAAGC+TGG - chr2.4:71900456-71900475 MS.gene002376:CDS 40.0%
GAACAACTTGTCTCTGTCAT+TGG - chr2.4:71899809-71899828 MS.gene002376:intron 40.0%
GAGATATGGAAGGACCAAAT+TGG - chr2.4:71897275-71897294 MS.gene002376:intron 40.0%
GCCACTGTTCAACATTATGT+GGG + chr2.4:71896402-71896421 None:intergenic 40.0%
GCCTCCATTACCTAATCTTA+CGG + chr2.4:71898913-71898932 None:intergenic 40.0%
GCGACAAAAGAGAGAAAAGT+TGG - chr2.4:71901117-71901136 MS.gene002376:CDS 40.0%
GGCAAATACATATACTCCAC+GGG + chr2.4:71900728-71900747 None:intergenic 40.0%
GGCATATGATCCGTAAGATT+AGG - chr2.4:71898900-71898919 MS.gene002376:intron 40.0%
GTCGACTGTTATTACTGTGA+GGG - chr2.4:71896051-71896070 MS.gene002376:CDS 40.0%
GTGGTGGTTGATTATTCCTT+AGG - chr2.4:71898853-71898872 MS.gene002376:intron 40.0%
GTTTGAGAACGCAGTTGAAA+CGG - chr2.4:71897314-71897333 MS.gene002376:intron 40.0%
TAACAAGCTTCTGCTGAGTT+AGG + chr2.4:71895559-71895578 None:intergenic 40.0%
TACATCGATGATCTTAGAGC+TGG - chr2.4:71897407-71897426 MS.gene002376:intron 40.0%
TATGAGCAGGCAATTGAATC+TGG - chr2.4:71900625-71900644 MS.gene002376:CDS 40.0%
TCAGTTGAGGTCAAACGAAA+AGG - chr2.4:71896730-71896749 MS.gene002376:intron 40.0%
TCATACTACAACAACGACCA+AGG + chr2.4:71900159-71900178 None:intergenic 40.0%
TCTCCATTAGGTAGTCAAAC+CGG + chr2.4:71896339-71896358 None:intergenic 40.0%
TGAGGTTCAACATGGAAATG+AGG - chr2.4:71900804-71900823 MS.gene002376:CDS 40.0%
TGCATAAAATGCCTAGGGTT+TGG - chr2.4:71895516-71895535 MS.gene002376:CDS 40.0%
TGCATATATCTTTGTGCTGC+TGG - chr2.4:71898272-71898291 MS.gene002376:intron 40.0%
TGCCAATCATTCCAAAAGTC+TGG + chr2.4:71900778-71900797 None:intergenic 40.0%
TGCCACTGTTCAACATTATG+TGG + chr2.4:71896403-71896422 None:intergenic 40.0%
TGGATAATGCTTGCCAAAAC+AGG - chr2.4:71900408-71900427 MS.gene002376:CDS 40.0%
TGTAATGATCTATGCCCACT+TGG - chr2.4:71898879-71898898 MS.gene002376:intron 40.0%
TTAAGGGGAAGACGAAACAT+AGG - chr2.4:71895837-71895856 MS.gene002376:CDS 40.0%
TTACGGATCATATGCCAAGT+GGG + chr2.4:71898896-71898915 None:intergenic 40.0%
TTGGGGGTTAAAGACATAGA+GGG - chr2.4:71899256-71899275 MS.gene002376:intron 40.0%
TTTCGTTTGACCTCAACTGA+TGG + chr2.4:71896730-71896749 None:intergenic 40.0%
! ACCATAGTTTGAGACTGAAG+GGG + chr2.4:71895295-71895314 None:intergenic 40.0%
! AGATGATGGTGCAAAAGAGA+AGG - chr2.4:71901329-71901348 MS.gene002376:CDS 40.0%
! ATGCATACTTTCTGGAGGTA+TGG - chr2.4:71897046-71897065 MS.gene002376:intron 40.0%
! CACCATAGTTTGAGACTGAA+GGG + chr2.4:71895296-71895315 None:intergenic 40.0%
! CATCACAAGCTCATTTTCCT+TGG - chr2.4:71897876-71897895 MS.gene002376:intron 40.0%
! GAGCTATCAAGTTCTGATGA+TGG + chr2.4:71898131-71898150 None:intergenic 40.0%
! GATTAGGAAGTTTTCGGATG+AGG - chr2.4:71895943-71895962 MS.gene002376:CDS 40.0%
! GGCTTTTATAAAGCCAAAGC+TGG - chr2.4:71898930-71898949 MS.gene002376:intron 40.0%
! GTGTTGTTCATGGTTCTGTT+CGG + chr2.4:71899775-71899794 None:intergenic 40.0%
! GTGTTTGAAGTATGCTGAAC+TGG - chr2.4:71900675-71900694 MS.gene002376:CDS 40.0%
! TACTTTTAGTGGCTGCTGAT+GGG - chr2.4:71896869-71896888 MS.gene002376:intron 40.0%
! TAGGTAGTTTGGAGTCTACT+CGG - chr2.4:71896965-71896984 MS.gene002376:intron 40.0%
! TCCGTAAGATTAGGTAATGG+AGG - chr2.4:71898909-71898928 MS.gene002376:intron 40.0%
! TCTGTCATTGGCTATAGTAG+TGG - chr2.4:71899821-71899840 MS.gene002376:intron 40.0%
! TGAATCTGGTCTTCCAGATA+AGG - chr2.4:71900639-71900658 MS.gene002376:CDS 40.0%
! TGTCGACTGTTATTACTGTG+AGG - chr2.4:71896050-71896069 MS.gene002376:CDS 40.0%
!! AGACGGTTTTATCTGGGTTT+TGG - chr2.4:71896278-71896297 MS.gene002376:intron 40.0%
!! AGCCTCCTTTAACTTGTCTT+TGG + chr2.4:71901034-71901053 None:intergenic 40.0%
!! AGCTCTAGAGAATGTTTCTC+TGG - chr2.4:71899095-71899114 MS.gene002376:intron 40.0%
!! AGTTGTGTGATTTGCTGACT+AGG - chr2.4:71895870-71895889 MS.gene002376:CDS 40.0%
!! GATGATGGAGCAGTTGAAAA+TGG + chr2.4:71898116-71898135 None:intergenic 40.0%
!! GCGCTTTTTGAAAGGTGAAT+CGG + chr2.4:71895339-71895358 None:intergenic 40.0%
!! GTTGATTTGGAGGAAAGTCT+AGG - chr2.4:71896946-71896965 MS.gene002376:intron 40.0%
!! TATTTTTGACAAGGCAGTGC+AGG - chr2.4:71896588-71896607 MS.gene002376:intron 40.0%
!! TCAGAAGTATCCGTAGAGTT+TGG - chr2.4:71899610-71899629 MS.gene002376:CDS 40.0%
!! TTACTTTTAGTGGCTGCTGA+TGG - chr2.4:71896868-71896887 MS.gene002376:intron 40.0%
AAACCGCCAAAAACAGCAGA+AGG + chr2.4:71901273-71901292 None:intergenic 45.0%
AACCGCCAAAAACAGCAGAA+GGG + chr2.4:71901272-71901291 None:intergenic 45.0%
AAGGCTTATCCCACTAAGTG+GGG + chr2.4:71900140-71900159 None:intergenic 45.0%
ACCCCTTCAGTCTCAAACTA+TGG - chr2.4:71895291-71895310 MS.gene002376:CDS 45.0%
ACCCTAAGCGAGGTTTCAAT+CGG + chr2.4:71895686-71895705 None:intergenic 45.0%
ACTAGCAAAGCGAGCTATGA+AGG - chr2.4:71900492-71900511 MS.gene002376:CDS 45.0%
AGACGAGATCGTCTTCTGAT+GGG + chr2.4:71895250-71895269 None:intergenic 45.0%
AGAGGTTTCACTTGATCAGC+TGG + chr2.4:71900436-71900455 None:intergenic 45.0%
AGGTTTCACTTGATCAGCTG+GGG + chr2.4:71900434-71900453 None:intergenic 45.0%
ATCAAGATTAGAGCTCGCCT+CGG + chr2.4:71897842-71897861 None:intergenic 45.0%
CAAGGCTTATCCCACTAAGT+GGG + chr2.4:71900141-71900160 None:intergenic 45.0%
CCAAACAGTGAATCTTGAGG+AGG - chr2.4:71901008-71901027 MS.gene002376:CDS 45.0%
CCATTATTAGGGGTGGGATT+AGG - chr2.4:71895927-71895946 MS.gene002376:CDS 45.0%
CCTAATCCCACCCCTAATAA+TGG + chr2.4:71895930-71895949 None:intergenic 45.0%
CCTCCTCAAGATTCACTGTT+TGG + chr2.4:71901011-71901030 None:intergenic 45.0%
CCTTCAGTCTCAAACTATGG+TGG - chr2.4:71895294-71895313 MS.gene002376:CDS 45.0%
CGATGTGGATGTTGACAAGA+AGG - chr2.4:71896234-71896253 MS.gene002376:intron 45.0%
CTAACAGAATGCAAAGGCCA+AGG + chr2.4:71897896-71897915 None:intergenic 45.0%
CTCCATTAGGTAGTCAAACC+GGG + chr2.4:71896338-71896357 None:intergenic 45.0%
CTCTCTTGCTCTCTCCAATT+TGG + chr2.4:71897292-71897311 None:intergenic 45.0%
CTTACGGATCATATGCCAAG+TGG + chr2.4:71898897-71898916 None:intergenic 45.0%
CTTGGGGGTTAAAGACATAG+AGG - chr2.4:71899255-71899274 MS.gene002376:intron 45.0%
GAAGGCTAGAGATGTGTTTG+AGG - chr2.4:71896021-71896040 MS.gene002376:CDS 45.0%
GAGGTTTCACTTGATCAGCT+GGG + chr2.4:71900435-71900454 None:intergenic 45.0%
GATGAAGGAGAAGGAAGATG+AGG - chr2.4:71896183-71896202 MS.gene002376:intron 45.0%
GCAATATGCTAAGCTGGAAG+AGG - chr2.4:71900462-71900481 MS.gene002376:CDS 45.0%
GCAGGTGAACTACAAAACTG+TGG - chr2.4:71896606-71896625 MS.gene002376:intron 45.0%
GCTAGAGATGTGTTTGAGGA+GGG - chr2.4:71896025-71896044 MS.gene002376:CDS 45.0%
GCTGAACTGGAAAGAAGCTT+GGG - chr2.4:71900688-71900707 MS.gene002376:CDS 45.0%
GGAAGACGAAACATAGGCTT+TGG - chr2.4:71895843-71895862 MS.gene002376:CDS 45.0%
GGACCAAACAGTGAATCTTG+AGG - chr2.4:71901005-71901024 MS.gene002376:CDS 45.0%
GGAGACTTCGAACAATTTCG+AGG + chr2.4:71895436-71895455 None:intergenic 45.0%
GGAGGAAAGTCTAGGTAGTT+TGG - chr2.4:71896954-71896973 MS.gene002376:intron 45.0%
GGAGGCCAAAGACAAGTTAA+AGG - chr2.4:71901026-71901045 MS.gene002376:CDS 45.0%
GGCCAAAGACAAGTTAAAGG+AGG - chr2.4:71901029-71901048 MS.gene002376:CDS 45.0%
GGTTTGACTACCTAATGGAG+AGG - chr2.4:71896338-71896357 MS.gene002376:intron 45.0%
GTCCTTCTGCATCAGATACT+CGG + chr2.4:71900989-71901008 None:intergenic 45.0%
TAGACGAGATCGTCTTCTGA+TGG + chr2.4:71895251-71895270 None:intergenic 45.0%
TCATAGATCTCGCGTGTCTT+GGG + chr2.4:71900610-71900629 None:intergenic 45.0%
TCCTTCTGCATCAGATACTC+GGG + chr2.4:71900988-71901007 None:intergenic 45.0%
TGAAGATGGGATGAAGGAGA+AGG - chr2.4:71896174-71896193 MS.gene002376:CDS 45.0%
TGAGAACTCACCATCCATTG+AGG + chr2.4:71898220-71898239 None:intergenic 45.0%
TGCTGAACTGGAAAGAAGCT+TGG - chr2.4:71900687-71900706 MS.gene002376:CDS 45.0%
TGGACAATCTGGCTAGTGTT+TGG - chr2.4:71896626-71896645 MS.gene002376:intron 45.0%
TGGAGCAGTTGAAAATGGCA+AGG + chr2.4:71898111-71898130 None:intergenic 45.0%
TGGATGCCATTATTAGGGGT+GGG - chr2.4:71895921-71895940 MS.gene002376:CDS 45.0%
TGTGATACACTTCACAACCG+AGG - chr2.4:71897822-71897841 MS.gene002376:intron 45.0%
TTCCTGGAAGCTATAAGCTC+TGG - chr2.4:71895390-71895409 MS.gene002376:CDS 45.0%
TTGACTACCTAATGGAGAGG+AGG - chr2.4:71896341-71896360 MS.gene002376:intron 45.0%
! AGAGGGTTGATTGATCCCTT+TGG - chr2.4:71899273-71899292 MS.gene002376:intron 45.0%
! AGGAAGTTTTCGGATGAGGT+TGG - chr2.4:71895947-71895966 MS.gene002376:CDS 45.0%
! AGGTAGTTTGGAGTCTACTC+GGG - chr2.4:71896966-71896985 MS.gene002376:intron 45.0%
! ATCTTTGTGCTGCTGGTCTA+AGG - chr2.4:71898279-71898298 MS.gene002376:intron 45.0%
! CCACCATAGTTTGAGACTGA+AGG + chr2.4:71895297-71895316 None:intergenic 45.0%
! CTCGTGCTGCTGAGATATTT+GGG - chr2.4:71900581-71900600 MS.gene002376:CDS 45.0%
! GACGAAACATAGGCTTTGGT+TGG - chr2.4:71895847-71895866 MS.gene002376:CDS 45.0%
! GGCTTTTGCAAAGCTTTACG+AGG - chr2.4:71896537-71896556 MS.gene002376:intron 45.0%
! GGGTGGGATTAGGAAGTTTT+CGG - chr2.4:71895937-71895956 MS.gene002376:CDS 45.0%
! GTTCATGGTTCTGTTCGGAT+AGG + chr2.4:71899770-71899789 None:intergenic 45.0%
! TCGTGCTGCTGAGATATTTG+GGG - chr2.4:71900582-71900601 MS.gene002376:CDS 45.0%
!! AAGGAGCACTTGACCTAATG+AGG - chr2.4:71896689-71896708 MS.gene002376:intron 45.0%
!! ACATTGACTTGAGATTGGCC+CGG - chr2.4:71896317-71896336 MS.gene002376:intron 45.0%
!! ACGAAATGGCTGCTTTGGAA+AGG - chr2.4:71901067-71901086 MS.gene002376:CDS 45.0%
!! AGTTTTCGGATGAGGTTGGT+CGG - chr2.4:71895951-71895970 MS.gene002376:CDS 45.0%
!! TAAGAAGCAGATGATGGTGG+TGG - chr2.4:71898837-71898856 MS.gene002376:intron 45.0%
!!! GATGTCCCTTCTGCTGTTTT+TGG - chr2.4:71901264-71901283 MS.gene002376:CDS 45.0%
!!! TTCTGCTGTTTTTGGCGGTT+TGG - chr2.4:71901272-71901291 MS.gene002376:CDS 45.0%
AAAGCAGCCATTTCGTCCTC+AGG + chr2.4:71901063-71901082 None:intergenic 50.0%
AAAGCCACCCATAGCGTATG+AGG + chr2.4:71896523-71896542 None:intergenic 50.0%
AAGACCTCATACGCTATGGG+TGG - chr2.4:71896516-71896535 MS.gene002376:intron 50.0%
AAGCAGCCATTTCGTCCTCA+GGG + chr2.4:71901062-71901081 None:intergenic 50.0%
AATGGAGAGGAGGCCTGAAT+TGG - chr2.4:71896351-71896370 MS.gene002376:intron 50.0%
AGCACTTGACCTAATGAGGC+GGG - chr2.4:71896693-71896712 MS.gene002376:intron 50.0%
AGCAGACTCTTGCCAAAGAC+TGG + chr2.4:71895774-71895793 None:intergenic 50.0%
ATTCAGGCCTCCTCTCCATT+AGG + chr2.4:71896351-71896370 None:intergenic 50.0%
CAAAAGTCTGGATCAGACCG+CGG + chr2.4:71900766-71900785 None:intergenic 50.0%
CCAAGGCTTATCCCACTAAG+TGG + chr2.4:71900142-71900161 None:intergenic 50.0%
CCACTTAGTGGGATAAGCCT+TGG - chr2.4:71900139-71900158 MS.gene002376:CDS 50.0%
CCCGATTGAAACCTCGCTTA+GGG - chr2.4:71895682-71895701 MS.gene002376:intron 50.0%
CCCTAAGCGAGGTTTCAATC+GGG + chr2.4:71895685-71895704 None:intergenic 50.0%
CCTACGATAAACCCTAAGCG+AGG + chr2.4:71895696-71895715 None:intergenic 50.0%
CCTCAAAAAGCTTCACCCTC+CGG + chr2.4:71896426-71896445 None:intergenic 50.0%
CCTCGCTTAGGGTTTATCGT+AGG - chr2.4:71895693-71895712 MS.gene002376:intron 50.0%
CTCATAGATCTCGCGTGTCT+TGG + chr2.4:71900611-71900630 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr2.4:71900136-71900155 None:intergenic 50.0%
GAAGGAGAAGGAAGATGAGG+AGG - chr2.4:71896186-71896205 MS.gene002376:intron 50.0%
GAGCACTTGACCTAATGAGG+CGG - chr2.4:71896692-71896711 MS.gene002376:intron 50.0%
GAGGACTGTTGATCCCATGA+AGG - chr2.4:71896486-71896505 MS.gene002376:intron 50.0%
GCAAGAGTCTGCTGAGAGAT+TGG - chr2.4:71895781-71895800 MS.gene002376:CDS 50.0%
GCAGATTCTCACTTACACGG+AGG - chr2.4:71896459-71896478 MS.gene002376:intron 50.0%
GCTAAGCTGGAAGAGGACTA+TGG - chr2.4:71900469-71900488 MS.gene002376:CDS 50.0%
GCTGACTAGGCATGCAAATG+AGG - chr2.4:71895883-71895902 MS.gene002376:CDS 50.0%
GGCTAGAGATGTGTTTGAGG+AGG - chr2.4:71896024-71896043 MS.gene002376:CDS 50.0%
GGGAAGACCTCATACGCTAT+GGG - chr2.4:71896513-71896532 MS.gene002376:intron 50.0%
GTGAATCGGAACGTGCGATT+AGG + chr2.4:71895325-71895344 None:intergenic 50.0%
GTGGATGCCATTATTAGGGG+TGG - chr2.4:71895920-71895939 MS.gene002376:CDS 50.0%
GTTGATCCCATGAAGGCAGT+GGG - chr2.4:71896493-71896512 MS.gene002376:intron 50.0%
TACAGCAGAGCCATCAGTTG+AGG - chr2.4:71896717-71896736 MS.gene002376:intron 50.0%
TAGGAGGGGTTTGCATGAGA+AGG - chr2.4:71896003-71896022 MS.gene002376:CDS 50.0%
TCCCGATTGAAACCTCGCTT+AGG - chr2.4:71895681-71895700 MS.gene002376:intron 50.0%
TGAGGACGAAATGGCTGCTT+TGG - chr2.4:71901062-71901081 MS.gene002376:CDS 50.0%
TGCCAGAGCTTATAGCTTCC+AGG + chr2.4:71895395-71895414 None:intergenic 50.0%
TGGAATCACAGTCCGATGGA+GGG - chr2.4:71901157-71901176 MS.gene002376:CDS 50.0%
TGGGAAGACCTCATACGCTA+TGG - chr2.4:71896512-71896531 MS.gene002376:intron 50.0%
TGTTGATCCCATGAAGGCAG+TGG - chr2.4:71896492-71896511 MS.gene002376:intron 50.0%
! AGGCATGCAAATGAGGTGTC+AGG - chr2.4:71895890-71895909 MS.gene002376:CDS 50.0%
! CGGAGGGTGAAGCTTTTTGA+GGG - chr2.4:71896424-71896443 MS.gene002376:intron 50.0%
! GATCGTCTTCTGATGGGTAG+AGG + chr2.4:71895244-71895263 None:intergenic 50.0%
! GCTCGTGCTGCTGAGATATT+TGG - chr2.4:71900580-71900599 MS.gene002376:CDS 50.0%
! GGCATGCAAATGAGGTGTCA+GGG - chr2.4:71895891-71895910 MS.gene002376:CDS 50.0%
! GTTTGAGACTGAAGGGGTTG+CGG + chr2.4:71895289-71895308 None:intergenic 50.0%
! TCGCTGCTTTGTCAACTGCT+GGG + chr2.4:71901101-71901120 None:intergenic 50.0%
! TGAGGTGTCAGGGTTGAATG+TGG - chr2.4:71895901-71895920 MS.gene002376:CDS 50.0%
!! CGCGCTTTAAAAGCACTTCC+TGG - chr2.4:71895374-71895393 MS.gene002376:CDS 50.0%
!! GGCTAGTGTTTGGTGTGAGT+GGG - chr2.4:71896636-71896655 MS.gene002376:intron 50.0%
!! TGGCTAGTGTTTGGTGTGAG+TGG - chr2.4:71896635-71896654 MS.gene002376:intron 50.0%
!! TGGGTTTGTAAGTGCTGGAG+TGG - chr2.4:71901137-71901156 MS.gene002376:CDS 50.0%
!!! GTCCCTTCTGCTGTTTTTGG+CGG - chr2.4:71901267-71901286 MS.gene002376:CDS 50.0%
ACTAAGTGGGGTCGGCTACA+AGG + chr2.4:71900128-71900147 None:intergenic 55.0%
AGACCGCGGATCAGCAAACT+TGG + chr2.4:71900752-71900771 None:intergenic 55.0%
AGGTCTTCCCACTGCCTTCA+TGG + chr2.4:71896503-71896522 None:intergenic 55.0%
GACACGCGAGATCTATGAGC+AGG - chr2.4:71900612-71900631 MS.gene002376:CDS 55.0%
GCCCGAGTATCTGATGCAGA+AGG - chr2.4:71900984-71901003 MS.gene002376:CDS 55.0%
GGAGAAATTGAACGTGCCCG+TGG - chr2.4:71900709-71900728 MS.gene002376:CDS 55.0%
GGAGAAGGAAGATGAGGAGG+AGG - chr2.4:71896189-71896208 MS.gene002376:intron 55.0%
GGAGTGGAATCACAGTCCGA+TGG - chr2.4:71901153-71901172 MS.gene002376:CDS 55.0%
GGTCTTCCCACTGCCTTCAT+GGG + chr2.4:71896502-71896521 None:intergenic 55.0%
GTGGAATCACAGTCCGATGG+AGG - chr2.4:71901156-71901175 MS.gene002376:CDS 55.0%
TCACTTACACGGAGGCTGTG+AGG - chr2.4:71896467-71896486 MS.gene002376:intron 55.0%
TGGGATCCCTGAGGACGAAA+TGG - chr2.4:71901053-71901072 MS.gene002376:CDS 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr2.4:71900128-71900147 MS.gene002376:CDS 55.0%
TGTCTCTGCAAGCTACAGCC+AGG - chr2.4:71900861-71900880 MS.gene002376:CDS 55.0%
TTGTAGCCGACCCCACTTAG+TGG - chr2.4:71900127-71900146 MS.gene002376:CDS 55.0%
! ATGTTGAACAGTGGCACCGG+AGG - chr2.4:71896407-71896426 MS.gene002376:intron 55.0%
! CAATTTCGAGGCGCTCACGA+AGG + chr2.4:71895424-71895443 None:intergenic 55.0%
! CCGGAGGGTGAAGCTTTTTG+AGG - chr2.4:71896423-71896442 MS.gene002376:intron 55.0%
! CGCGGTCTGATCCAGACTTT+TGG - chr2.4:71900764-71900783 MS.gene002376:CDS 55.0%
! CGCTGCTTTGTCAACTGCTG+GGG + chr2.4:71901100-71901119 None:intergenic 55.0%
! GGCCCGGTTTGACTACCTAA+TGG - chr2.4:71896333-71896352 MS.gene002376:intron 55.0%
! GTCGCTGCTTTGTCAACTGC+TGG + chr2.4:71901102-71901121 None:intergenic 55.0%
! TGATCAGCTGGGGCCTGTTT+TGG + chr2.4:71900424-71900443 None:intergenic 55.0%
! TGTTGAACAGTGGCACCGGA+GGG - chr2.4:71896408-71896427 MS.gene002376:intron 55.0%
!! CCTCCAAGTTTGCTGATCCG+CGG - chr2.4:71900746-71900765 MS.gene002376:CDS 55.0%
AAAGGAGGCTGGGATCCCTG+AGG - chr2.4:71901044-71901063 MS.gene002376:CDS 60.0%
CCGCGGATCAGCAAACTTGG+AGG + chr2.4:71900749-71900768 None:intergenic 60.0%
CTGCTGTAGCCCGCCTCATT+AGG + chr2.4:71896705-71896724 None:intergenic 60.0%
! CGGATGAGGTTGGTCGGTTG+TGG - chr2.4:71895957-71895976 MS.gene002376:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 71895221 71901407 71895221 ID=MS.gene002376
chr2.4 mRNA 71895221 71901407 71895221 ID=MS.gene002376.t1;Parent=MS.gene002376
chr2.4 exon 71899877 71901407 71899877 ID=MS.gene002376.t1.exon1;Parent=MS.gene002376.t1
chr2.4 CDS 71899877 71901407 71899877 ID=cds.MS.gene002376.t1;Parent=MS.gene002376.t1
chr2.4 exon 71899566 71899750 71899566 ID=MS.gene002376.t1.exon2;Parent=MS.gene002376.t1
chr2.4 CDS 71899566 71899750 71899566 ID=cds.MS.gene002376.t1;Parent=MS.gene002376.t1
chr2.4 exon 71899293 71899463 71899293 ID=MS.gene002376.t1.exon3;Parent=MS.gene002376.t1
chr2.4 CDS 71899293 71899463 71899293 ID=cds.MS.gene002376.t1;Parent=MS.gene002376.t1
chr2.4 exon 71895746 71896198 71895746 ID=MS.gene002376.t1.exon4;Parent=MS.gene002376.t1
chr2.4 CDS 71895746 71896198 71895746 ID=cds.MS.gene002376.t1;Parent=MS.gene002376.t1
chr2.4 exon 71895221 71895658 71895221 ID=MS.gene002376.t1.exon5;Parent=MS.gene002376.t1
chr2.4 CDS 71895221 71895658 71895221 ID=cds.MS.gene002376.t1;Parent=MS.gene002376.t1
Gene Sequence

>MS.gene002376

ATGGCGGCGATTTCATCTGACCTCTACCCATCAGAAGACGATCTCGTCTACGAAGAAGAACTTCTCCGCAACCCCTTCAGTCTCAAACTATGGTGGCGTTACCTAATCGCACGTTCCGATTCACCTTTCAAAAAGCGCTTCATCATCTACGAACGCGCTTTAAAAGCACTTCCTGGAAGCTATAAGCTCTGGCACGCTTACCTTCGTGAGCGCCTCGAAATTGTTCGAAGTCTCCCAATCACACATTCCCAATTTGAAACGCTCAATAACACGTTTGAACGTGCTCTTGTTACTATGCATAAAATGCCTAGGGTTTGGATTATGTATCTTCAAACCCTAACTCAGCAGAAGCTTGTTACCAGAACGCGAAGAACTTTTGATAGAGCTTTATGTGCACTTCCTGTCACACAGCATGATAGAATTTGGGAATATTATTTGTTTTTCGTTAGTCAAAAGGGTATCCCGATTGAAACCTCGCTTAGGGTTTATCGTAGGTATTTGCAGTATGATCCGAATCATATTGAGGATTTTATTGAGTTTTTGATTAATTCCAGTCTTTGGCAAGAGTCTGCTGAGAGATTGGCCTCTGTTTTGAATGATGATAAATTTTATTCGATTAAGGGGAAGACGAAACATAGGCTTTGGTTGGAGTTGTGTGATTTGCTGACTAGGCATGCAAATGAGGTGTCAGGGTTGAATGTGGATGCCATTATTAGGGGTGGGATTAGGAAGTTTTCGGATGAGGTTGGTCGGTTGTGGACTTCACTTGCTGAGTATTATATTAGGAGGGGTTTGCATGAGAAGGCTAGAGATGTGTTTGAGGAGGGCATGTCGACTGTTATTACTGTGAGGGATTTTAGTGTTATATTTGATTCGTACTTGCAATTTGAAGAGAGTATGCTTGCTTTTAAGATGGAGGATATGGATATGAGTGACGAAGAAGATGAAGAAAATGAAGATGGGATGAAGGAGAAGGAAGATGAGGAGGAGGATGTAGATGTTCGTTTCAAATTCGATGTGGATGTTGACAAGAAGGAATTTGTGAAGGAATTTAAGAAGACGGTTTTATCTGGGTTTTGGCTGAATGACAAGAATGACATTGACTTGAGATTGGCCCGGTTTGACTACCTAATGGAGAGGAGGCCTGAATTGGCTAATAGTGTGCTTTTGCGTCAAAACCCACATAATGTTGAACAGTGGCACCGGAGGGTGAAGCTTTTTGAGGGTAATCCGACTAAGCAGATTCTCACTTACACGGAGGCTGTGAGGACTGTTGATCCCATGAAGGCAGTGGGAAGACCTCATACGCTATGGGTGGCTTTTGCAAAGCTTTACGAGGAGCACAACGATCTTGCCAATGCTCGAGTTATTTTTGACAAGGCAGTGCAGGTGAACTACAAAACTGTGGACAATCTGGCTAGTGTTTGGTGTGAGTGGGCTGAAATAGAGTTGAAACATGAGAATTTCAAAGGAGCACTTGACCTAATGAGGCGGGCTACAGCAGAGCCATCAGTTGAGGTCAAACGAAAAGGTAATCTTAGTTCAACATGTTCCCATTTTATTTTTCACAATATGCTCTATTTTTTTTTAATTTTTTTTTTTGGTGTGTTTGTTGAATGGAGTTAACTGTTGAATTTATATTCTGCGTTACTTTTAGTGGCTGCTGATGGGAATCAACCAGTTCAGATGAAGTTGCATAAATCTTTGAGATTGTGGACCTTTTATGTTGATTTGGAGGAAAGTCTAGGTAGTTTGGAGTCTACTCGGGAAGTTTATGAACGGATTTTGGATTTACGAATAGCCACACCACAAATAATAATCAATTATGCATACTTTCTGGAGGTATGGAGCAACACAGTTTTTTAAGTACAATATCTCTTTTGGATTTTACTCTGATGGTTTTGGCTCATTGACATTATTGTTAAATGATTTTGATTTATGTAGGAACACAAATACTTTGAAGATGCTTTTAAGGTTTATGAAAGGGGAGTCAAGATATTCAAGTACCCACATGTTAAAGATATTTGGGTTACATATCTGTCTAAATTTGTGAAGAGATATGGAAGGACCAAATTGGAGAGAGCAAGAGAGCTGTTTGAGAACGCAGTTGAAACGGTATGTGCTTTTATTTTTCTTCTGTTGCTCATCTCTAAGCGTTCTTGAAGTTACTGTTTCTTTTTAAATTTTACATCGATGATCTTAGAGCTGGATTACGTTTGAAGTGCGTCAAATATAACAAATCTTATTCCTGTGATATTTTCTATATGACCCATCATCAATTTTCTGCTTTTCATTGTAATTATAATATTTTGTATGGTTGTAGTGTGCACTACTAAAGTTGATGAACCTGAAAACTTTAGTTATTTTAACATAAAGCATTGGATTAGATTGAATGAATTGATTTGGATTACATAGAGAAGTTGATGTAAGTTAATGCTGATACAGTGTCTTCTTTACTCTCCGGTTTATACAATTCAACATAATATTTTAAACGTGTTAAGCAGCATTTAGACAGTGAATATGGATTCTATCATTTTTCCTTCAACTATTCTTTGTAATTTCAATCTCACATCCGATTTCTTATGTTAGAGCTTGAATTCTTGTGATACACTTCACAACCGAGGCGAGCTCTAATCTTGATGAGTCACCATTTTGCATCACAAGCTCATTTTCCTTGGCCTTTGCATTCTGTTAGAGTAATTCCATTTTGACAGACTTCGCCATTTTACATTCATTTATAGATTCTCAATTCTGTTATAGGAAATTGACTCTAAAAGGACTAACACTGTCTCCTTTTTCACTATTCTATATGGAAATTGACTCTTGATTTCATCTTCACTACCCACATTAAATGATATAAAATCACCAAATTCAAAACTAGACAAAGCCTTGCCATTTTCAACTGCTCCATCATCAGAACTTGATAGCTCATAAACTAACAATCGCTGCTTTTCATCAGAACCTCCCATTTGATGTCTCAAATTTTCATTGTAAAACCTCAATGGATGGTGAGTTCTCATATGGTTTCCAAAAAAATCAATTTCTAAATCCTGCATATATCTTTGTGCTGCTGGTCTAAGGCATTATATTGATTTAATTATTTATGTTGACTAAGATCATGTCAAGGTATTATTAAAGGCAGTGAATTGTATTATGTAGAATTTATTGAATTGGTTTGAGAGTTAAGGGGTCTCTTTGTTCATTTCATTGTCTGTGGCATAGACATTAGACTTGATGAAATCTGGAAATAGTTATGCTTATCGTAAGCTAGAAGTCTCAAGTGTCGATATACACCAGATTTCCATTAATATATTCACCTCATGATTATTTTCTTCATTTCAGTATATATTCTTTATCACAGTGAGCAGGTTTTCTCACCATACTTCTTCTATCTATATATACATATGTGGGTGTGTGTAAAAAATTAGCAAAGTATGTGCTGGTCATGCCAAAACTAAGTATAAATAACACAAGGATAGAAAGTAATAACATATATCATAACTCATCAAAACTAGTACTACTTTCTCCTGCATTTGTTATCACCAAAATATAGGGTATAAAAACAGCATCTCTGTAAGGGTTTTGATCAAGATAATTTAATAACAAAATTGAGTTTTAAGAAGCAGATGATGGTGGTGGTTGATTATTCCTTAGGACTTGTAATGATCTATGCCCACTTGGCATATGATCCGTAAGATTAGGTAATGGAGGCTTTTATAAAGCCAAAGCTGGGTAATTGAATATATGCATAGAAACATATTGAACCAGGTTTCATCTTCTTTTTATTTGTTCTTTCTGGAGTTGCTATTACTTGAAAATAGCTTTTCTCCTTCATAGTCATATGATCATATCATAATGTTTGAGCTTGAATTCTAGCTCTAGAGAATGTTTCTCTGGTATGTTGGTATATGAATATGATGTTGAAACAATAGCAATTCGTATGATGCTTGAAATTATAGTTTCTCTTTTCTTATTTCATTCTTCATTTCACTAGATATATTGGTTAGAGTTAAAAGAAGCAAGCTTAAGAATTTCTTGGGGGTTAAAGACATAGAGGGTTGATTGATCCCTTTGGAAGTCATAGTTCTAAGCAATATGTGATTGTGGAATCTCAATTCACTCTGTCTCTCCCCCCACATAACATATCAATTTTTTTAAATGAGTTCTGTCTGCATTATTTTTTTCTATTAGCCAAACCTTTTCCCTCAAAAGATCTTGTCATAGAATAACTACGTGATATGTTTGATGTCTTAGCCAAGATAAAGAATTGTTCTTTGATGGGTTTTTATTTATTTGTTTATTCAAAGCTTGCCACTTGCATATTAAATACACAACTTATTCGGATGTTTGCAATCAGGTTTAGAAGCTTTGCTTGCAGTTCTGTTATTTTCAGAAGTATCCGTAGAGTTTGGTTCAATTCAGCATTTATAAGTATCCCCGTTCTTTAGTTTTAGAAGCGGTTCAGTTCCTTTAATTTTAGAAACAGTTCAATTTAGGAATATAAGATCCCATTATAGTGAGAACCAAAAGACATCACTTTGGTTTTCCTATCCGAACAGAACCATGAACAACACTTGCATTAACTGTGGAACAACTTGTCTCTGTCATTGGCTATAGTAGTGGAAAACCAACATTGTCCTCTTTTGCTTTTGGTAATCCTAGAGTGTAATGTAAAATATATCATAACAGTCTTAGCATGATTATACAGCAAGTCAGAGACTTCAAAGTCTGAAATAGTAGCACTTCACACTGCTATGTTTGCAAAGCAATAAGTGCCGCACCTATTTTTGTTGTCAAAATGAAGTATTGTAGTATGACAGTAAAGAAAATATTAGGAAAGATTTAGAGTTTAATGAGTTGGATCCCAATATAGATTATGATATAACATTATGGTATAATTTGATCCTTGTAGCCGACCCCACTTAGTGGGATAAGCCTTGGTCGTTGTTGTAGTATGACTATATTTGCTATTTGTGAACTAAAGTGACTTAGTCAAGTGATTGTACTGTACTGAATTTTAATGTAATCAATAAGCATCTAGTTTGTCAAAGATCATAACTAGTATTTTCCTTGGTTCATTGTAGTATGTGATGACATTCAACTGTTTGATAATGTGTTTGTTTGTATCTTGTAACACTTGAATTTTATTGTTGATAACGTATTATAATGCTAACACAATTTGCTTTTTGGATAATGCTTGCCAAAACAGGCCCCAGCTGATCAAGTGAAACCTCTCTATCTGCAATATGCTAAGCTGGAAGAGGACTATGGACTAGCAAAGCGAGCTATGAAGGTTTACGATCAAGCAACGAAAGCTGTTCCAAACAATGAAAAGTTAAGCATGTATGAAATATACATTGCTCGTGCTGCTGAGATATTTGGGGTACCCAAGACACGCGAGATCTATGAGCAGGCAATTGAATCTGGTCTTCCAGATAAGGATGTCAAAACTATGTGTTTGAAGTATGCTGAACTGGAAAGAAGCTTGGGAGAAATTGAACGTGCCCGTGGAGTATATGTATTTGCCTCCAAGTTTGCTGATCCGCGGTCTGATCCAGACTTTTGGAATGATTGGCATGAATTTGAGGTTCAACATGGAAATGAGGACACCTTTAGAGAAATGCTTCGAATTAAAAGGAGTGTCTCTGCAAGCTACAGCCAGGTTACTATAATGTTTCGATTTTCACTTCCTGAGCCTTATCATTGATTCGTTTGCATTTATTCTAATCTTAGTTTTATTATTCTACAGACACATTTTATACTGCCCGAGTATCTGATGCAGAAGGACCAAACAGTGAATCTTGAGGAGGCCAAAGACAAGTTAAAGGAGGCTGGGATCCCTGAGGACGAAATGGCTGCTTTGGAAAGGCAATTAGCCCCAGCAGTTGACAAAGCAGCGACAAAAGAGAGAAAAGTTGGGTTTGTAAGTGCTGGAGTGGAATCACAGTCCGATGGAGGGATAAAAACTAATGCGAACCATGAAGAAATTGAGTTACCAGAAGAAAATGACTCTGATGACGATGATATTGAGATTGCACAAAAAGATGTCCCTTCTGCTGTTTTTGGCGGTTTGGTTAGAAAAAGAGACGAGATTGAAAATAATGAAGTAGATGATGGTGCAAAAGAGAAGGATAATGAAAGTCGGCTTGGTGCCCTTGAGAGAATTAAGAAGCTGAAACGAAATTAA
Protein sequence

>MS.gene002376.t1

MAAISSDLYPSEDDLVYEEELLRNPFSLKLWWRYLIARSDSPFKKRFIIYERALKALPGSYKLWHAYLRERLEIVRSLPITHSQFETLNNTFERALVTMHKMPRVWIMYLQTLTQQKLVTRTRRTFDRALCALPVTQHDRIWEYYLFFVSQKGIPIETSLRVYRRYLQYDPNHIEDFIEFLINSSLWQESAERLASVLNDDKFYSIKGKTKHRLWLELCDLLTRHANEVSGLNVDAIIRGGIRKFSDEVGRLWTSLAEYYIRRGLHEKARDVFEEGMSTVITVRDFSVIFDSYLQFEESMLAFKMEDMDMSDEEDEENEDGMKEKEDEEEDVDVRFKFDVDVDKKEFVKEFKKTVLSGFWLNDKNDIDLRLARFDYLMERRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTVDPMKAVGRPHTLWVAFAKLYEEHNDLANARVIFDKAVQVNYKTVDNLASVWCEWAEIELKHENFKGALDLMRRATAEPSVEVKRKVAADGNQPVQMKLHKSLRLWTFYVDLEESLGSLESTREVYERILDLRIATPQIIINYAYFLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGRTKLERARELFENAVETAPADQVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKTMCLKYAELERSLGEIERARGVYVFASKFADPRSDPDFWNDWHEFEVQHGNEDTFREMLRIKRSVSASYSQTHFILPEYLMQKDQTVNLEEAKDKLKEAGIPEDEMAALERQLAPAVDKAATKERKVGFVSAGVESQSDGGIKTNANHEEIELPEENDSDDDDIEIAQKDVPSAVFGGLVRKRDEIENNEVDDGAKEKDNESRLGALERIKKLKRN