AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene047509

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047509.t1 MTR_2g012310 99.459 925 5 0 1 925 1 925 0.0 1894
MS.gene047509.t1 MTR_5g027050 95.614 114 5 0 434 547 107 220 3.19e-69 229
MS.gene047509.t1 MTR_5g027050 42.857 154 60 4 143 274 20 167 5.21e-27 110
MS.gene047509.t1 MTR_5g027050 76.471 51 7 1 250 300 61 106 1.32e-14 74.3
MS.gene047509.t1 MTR_2g031710 57.616 151 30 2 711 861 1 117 8.30e-46 160
MS.gene047509.t1 MTR_5g009520 26.543 324 193 11 436 749 92 380 7.51e-18 89.0
MS.gene047509.t1 MTR_5g009520 26.316 247 171 5 526 772 90 325 4.01e-15 80.5
MS.gene047509.t1 MTR_6g090890 26.471 306 181 10 436 732 92 362 8.46e-16 82.4
MS.gene047509.t1 MTR_6g090890 25.506 247 172 6 526 772 90 324 4.59e-12 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene047509.t1 AT5G28740 76.155 931 198 6 3 925 2 916 0.0 1419
MS.gene047509.t1 AT5G41770 23.077 403 248 14 437 815 94 458 4.12e-15 80.5
MS.gene047509.t1 AT5G41770 26.316 247 171 5 526 772 91 326 7.20e-15 79.7
MS.gene047509.t1 AT5G45990 25.726 241 161 6 526 762 77 303 8.22e-14 76.3
MS.gene047509.t1 AT5G45990 22.028 572 317 22 90 646 99 556 1.39e-12 72.0
MS.gene047509.t1 AT5G45990 23.866 419 251 18 375 768 58 433 8.99e-11 66.2
MS.gene047509.t1 AT5G45990 25.726 241 161 6 526 762 87 313 8.40e-14 76.3
MS.gene047509.t1 AT5G45990 22.028 572 317 22 90 646 109 566 1.48e-12 72.0
MS.gene047509.t1 AT5G45990 23.866 419 251 18 375 768 68 443 8.63e-11 66.2
MS.gene047509.t1 AT3G51110 27.731 238 157 8 528 762 72 297 7.24e-12 68.9

Find 205 sgRNAs with CRISPR-Local

Find 414 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCACATGTTAAAGATATT+TGG 0.110974 2.1:-72145985 MS.gene047509:CDS
GGAAGTTTATGAACGGATTT+TGG 0.151853 2.1:-72146225 MS.gene047509:CDS
GCTCGTGCTGCTGAGATATT+TGG 0.169951 2.1:-72142635 MS.gene047509:CDS
TGAATGTGGATGCCATTATT+AGG 0.198462 2.1:-72147289 MS.gene047509:CDS
TCACACAGCATGATAGAATT+TGG 0.202210 2.1:-72147580 MS.gene047509:CDS
GAGAAATGCTTCGAATTAAA+AGG 0.216135 2.1:-72142379 MS.gene047509:CDS
AATCAATTATGCATACTTTC+TGG 0.221520 2.1:-72146174 MS.gene047509:CDS
TGTTATTGAGCGTTTCAAAT+TGG 0.242989 2.1:+72147735 None:intergenic
AGCCTCCTTTAACTTGTCTT+TGG 0.243717 2.1:+72142184 None:intergenic
CCTCCTCAAGATTCACTGTT+TGG 0.275998 2.1:+72142207 None:intergenic
CGCGGTCTGATCCAGACTTT+TGG 0.280355 2.1:-72142451 MS.gene047509:CDS
GTCGCTGCTTTGTCAACTGC+TGG 0.286285 2.1:+72142116 None:intergenic
TAACAAGCTTCTGCTGAGTT+AGG 0.292590 2.1:+72147648 None:intergenic
GAGATATGGAAGGACAAAAT+TGG 0.292722 2.1:-72145936 MS.gene047509:CDS
CCCACATGTTAAAGATATTT+GGG 0.294465 2.1:-72145984 MS.gene047509:CDS
CTGCTGTAGCGCGCCTCATT+AGG 0.299968 2.1:+72146502 None:intergenic
ATCAAAAGTTCTTCGCGTTC+TGG 0.301328 2.1:+72147625 None:intergenic
CTGGTAACTCAATTTCTTCA+TGG 0.301375 2.1:+72142018 None:intergenic
GGAGGAAAGTCTAGGTAGTT+TGG 0.315643 2.1:-72146258 MS.gene047509:CDS
CTCGTGCTGCTGAGATATTT+GGG 0.316400 2.1:-72142634 MS.gene047509:CDS
CCATTATTAGGGGTGGGATT+AGG 0.322234 2.1:-72147277 MS.gene047509:CDS
CTCATAGATCTCGCGTGTCT+TGG 0.324672 2.1:+72142607 None:intergenic
TTCCTCCAAATCAACATAAA+AGG 0.325686 2.1:+72146274 None:intergenic
CGCTTGCTGAGTATTATATT+AGG 0.327118 2.1:-72147220 MS.gene047509:CDS
ACCCCTTCAGTCTCAAACTA+TGG 0.330362 2.1:-72147913 MS.gene047509:CDS
TGAGGACGAAATGGCTGCTT+TGG 0.333805 2.1:-72142153 MS.gene047509:CDS
TCTAAATTTGTGAAGAGATA+TGG 0.334635 2.1:-72145950 MS.gene047509:CDS
GAATGTGGATGCCATTATTA+GGG 0.336700 2.1:-72147288 MS.gene047509:CDS
TGCATAAAATGCCTAGGGTT+TGG 0.351156 2.1:-72147688 MS.gene047509:CDS
TGCCAGAGCTTATAGCTTCC+AGG 0.357475 2.1:+72147812 None:intergenic
CCTAATCCCACCCCTAATAA+TGG 0.360380 2.1:+72147277 None:intergenic
GTTATTGAGCGTTTCAAATT+GGG 0.365931 2.1:+72147736 None:intergenic
AGGTCTTCCCACTGCCTTCA+TGG 0.379853 2.1:+72146704 None:intergenic
GCAAGAGTCTGCTGAGAGAT+TGG 0.379997 2.1:-72147423 MS.gene047509:CDS
GGAGGCCAAAGACAAGTTAA+AGG 0.384243 2.1:-72142189 MS.gene047509:CDS
GTGAATCGGAACGTGCGATT+AGG 0.386476 2.1:+72147882 None:intergenic
CGGATGAGGTTGGTCGGTTG+TGG 0.389890 2.1:-72147247 MS.gene047509:CDS
GTCCTTCTGCATCAGATACT+CGG 0.395780 2.1:+72142229 None:intergenic
TGCCAATCATTCCAAAAGTC+TGG 0.396584 2.1:+72142440 None:intergenic
AGCACACTATTAGCCAATTC+AGG 0.397578 2.1:+72146840 None:intergenic
AGCAGACTCTTGCCAAAGAC+TGG 0.403270 2.1:+72147433 None:intergenic
CTACAAAACTGTGGACAATC+TGG 0.403587 2.1:-72146589 MS.gene047509:CDS
GCTAAGCTGGAAGAGGACTA+TGG 0.403686 2.1:-72142746 MS.gene047509:CDS
TTATGCAGCTTCATCTGAAC+TGG 0.404342 2.1:+72146314 None:intergenic
GCGACAAAAGAGAGAAAAGT+TGG 0.405219 2.1:-72142098 MS.gene047509:CDS
CGCGCTCTAAAAGCACTTCC+TGG 0.405935 2.1:-72147830 MS.gene047509:CDS
TCTCCATTAGGTAGTCAAAC+CGG 0.409875 2.1:+72146868 None:intergenic
CACACAGCATGATAGAATTT+GGG 0.410332 2.1:-72147579 MS.gene047509:CDS
AATGGAGAGGAGGCCTGAAT+TGG 0.410428 2.1:-72146853 MS.gene047509:CDS
TATGAGCAGGCAATTGAATC+TGG 0.411600 2.1:-72142590 MS.gene047509:CDS
AATTCGAAGCATTTCTCTAA+AGG 0.413500 2.1:+72142385 None:intergenic
ATTCAGGCCTCCTCTCCATT+AGG 0.416193 2.1:+72146856 None:intergenic
GTGTTTGAAGTATGCTGAAC+TGG 0.419742 2.1:-72142540 MS.gene047509:CDS
AAAGCAGCCATTTCGTCCTC+AGG 0.421199 2.1:+72142155 None:intergenic
TCATAGATCTCGCGTGTCTT+GGG 0.427162 2.1:+72142608 None:intergenic
GGAAGACGAAACATAGGCTT+TGG 0.432217 2.1:-72147361 MS.gene047509:CDS
AGAGGTTTCACTTGATCAGC+TGG 0.433456 2.1:+72142782 None:intergenic
GGCCCGGTTTGACTACCTAA+TGG 0.434787 2.1:-72146871 MS.gene047509:CDS
TGCCACTGTTCAACATTATG+TGG 0.434788 2.1:+72146804 None:intergenic
ACCCTAAGTGAGGTTTCAAT+CGG 0.437800 2.1:+72147521 None:intergenic
GCATAATTGATTATTATTTG+TGG 0.437816 2.1:+72146185 None:intergenic
AGACCGCGGATCAGCAAACT+TGG 0.439667 2.1:+72142466 None:intergenic
TCGCTGCTTTGTCAACTGCT+GGG 0.441481 2.1:+72142117 None:intergenic
AACAAGCTTCTGCTGAGTTA+GGG 0.441523 2.1:+72147649 None:intergenic
AAAGTTGGGTTTGTAAGTGC+TGG 0.441888 2.1:-72142083 MS.gene047509:CDS
AGGCATGCAAATGAGGTGTC+AGG 0.444745 2.1:-72147314 MS.gene047509:CDS
GAAGATGAAGAAAATGAAGA+TGG 0.444861 2.1:-72147044 MS.gene047509:CDS
TCAAATTGGGAATGTGTGAT+TGG 0.448003 2.1:+72147749 None:intergenic
CAAATTGGGAATGTGTGATT+GGG 0.448611 2.1:+72147750 None:intergenic
GGAGAAGGAAGATGAGGAGG+AGG 0.449067 2.1:-72147015 MS.gene047509:CDS
GGCTAGTGTTTGGTGTGAGT+GGG 0.453351 2.1:-72146568 MS.gene047509:CDS
TGCTGAACTGGAAAGAAGCT+TGG 0.453727 2.1:-72142528 MS.gene047509:CDS
CCCGATTGAAACCTCACTTA+GGG 0.454162 2.1:-72147522 MS.gene047509:CDS
ATAAAATCCTCAATATGATT+CGG 0.458306 2.1:+72147473 None:intergenic
GAAGGCTAGAGATGTCTTTG+AGG 0.460769 2.1:-72147183 MS.gene047509:CDS
CTATCTGCAATATGCTAAGC+TGG 0.465578 2.1:-72142759 MS.gene047509:CDS
GAATGACATTGACTTGAGAT+TGG 0.465693 2.1:-72146892 MS.gene047509:CDS
TGGACAATCTGGCTAGTGTT+TGG 0.465917 2.1:-72146578 MS.gene047509:CDS
TGGGATCCCTGAGGACGAAA+TGG 0.466824 2.1:-72142162 MS.gene047509:CDS
TTACTATGCATAAAATGCCT+AGG 0.471939 2.1:-72147694 MS.gene047509:CDS
AAAGCCACCCATAGCGTATG+AGG 0.473239 2.1:+72146684 None:intergenic
ATTCTATCATGCTGTGTGAC+AGG 0.476712 2.1:+72147584 None:intergenic
TGCATAAATCTTTGAGATTG+TGG 0.477950 2.1:-72146298 MS.gene047509:CDS
GAATGATTGGCATGAATTTG+AGG 0.478821 2.1:-72142429 MS.gene047509:CDS
AAAGACAAGTTAAAGGAGGC+TGG 0.480550 2.1:-72142182 MS.gene047509:CDS
GCTGAACTGGAAAGAAGCTT+GGG 0.489860 2.1:-72142527 MS.gene047509:CDS
TGAATCTGGTCTTCCAGATA+AGG 0.494012 2.1:-72142576 MS.gene047509:CDS
GACGAAACATAGGCTTTGGT+TGG 0.494038 2.1:-72147357 MS.gene047509:CDS
TGGCTAGTGTTTGGTGTGAG+TGG 0.497525 2.1:-72146569 MS.gene047509:CDS
GGTCTTCCCACTGCCTTCAT+GGG 0.500810 2.1:+72146705 None:intergenic
TGTGAAGGAATTTAAGAAGA+CGG 0.501197 2.1:-72146943 MS.gene047509:CDS
TGCTGAGTATTATATTAGGA+GGG 0.505054 2.1:-72147216 MS.gene047509:CDS
TGAAGATGGGATGAAGGAGA+AGG 0.507911 2.1:-72147030 MS.gene047509:CDS
TTGCTGAGTATTATATTAGG+AGG 0.510585 2.1:-72147217 MS.gene047509:CDS
CATGAATTTGAGGTTCAACA+TGG 0.510628 2.1:-72142419 MS.gene047509:CDS
ACTAGCAAAGCGAGCTATGA+AGG 0.511003 2.1:-72142723 MS.gene047509:CDS
TACTATGCATAAAATGCCTA+GGG 0.515600 2.1:-72147693 MS.gene047509:CDS
TCAGCTTCTTAATTCTCTCA+AGG 0.516234 2.1:+72141841 None:intergenic
TGGGAAGACCTCATACGCTA+TGG 0.517952 2.1:-72146692 MS.gene047509:CDS
TCAGTTGAGGTCAAACGAAA+AGG 0.518177 2.1:-72146474 MS.gene047509:intron
AGAAAATGAAGATGGGATGA+AGG 0.520414 2.1:-72147036 MS.gene047509:CDS
GTTTGAGAACGCAGTTGAAA+CGG 0.522364 2.1:-72145897 MS.gene047509:intron
TTGAAACATGAGAATTTCAA+AGG 0.522872 2.1:-72146534 MS.gene047509:CDS
TTTCGTTTGACCTCAACTGA+TGG 0.526632 2.1:+72146477 None:intergenic
GGAGACTTCGAACAATTTCG+AGG 0.527697 2.1:+72147771 None:intergenic
TGAGGTTCAACATGGAAATG+AGG 0.530360 2.1:-72142411 MS.gene047509:CDS
GAGGTTTCACTTGATCAGCT+GGG 0.530771 2.1:+72142783 None:intergenic
AGTTGTGTGATTTGCTGACT+AGG 0.530856 2.1:-72147334 MS.gene047509:CDS
CGATGTGGATGTTGACAAGA+AGG 0.534093 2.1:-72146970 MS.gene047509:CDS
AGATGATGGTGCAAAAGAGA+AGG 0.535525 2.1:-72141886 MS.gene047509:CDS
GAAGGAGAAGGAAGATGAGG+AGG 0.538350 2.1:-72147018 MS.gene047509:CDS
AAGATGAAGAAAATGAAGAT+GGG 0.539143 2.1:-72147043 MS.gene047509:CDS
CTCCATTAGGTAGTCAAACC+GGG 0.541182 2.1:+72146869 None:intergenic
CCCAAATATCTTTAACATGT+GGG 0.541285 2.1:+72145984 None:intergenic
CACCATAGTTTGAGACTGAA+GGG 0.541433 2.1:+72147911 None:intergenic
AAGGAGCACTTGACCTAATG+AGG 0.543926 2.1:-72146515 MS.gene047509:CDS
ACCCAAATATCTTTAACATG+TGG 0.544787 2.1:+72145983 None:intergenic
TAGGTAGTTTGGAGTCTACT+CGG 0.547270 2.1:-72146247 MS.gene047509:CDS
GCCACTGTTCAACATTATGT+GGG 0.547271 2.1:+72146805 None:intergenic
TTCCTGGAAGCTATAAGCTC+TGG 0.548539 2.1:-72147814 MS.gene047509:CDS
GTTGATTTGGAGGAAAGTCT+AGG 0.551528 2.1:-72146266 MS.gene047509:CDS
GCAATATGCTAAGCTGGAAG+AGG 0.552790 2.1:-72142753 MS.gene047509:CDS
CGCTGCTTTGTCAACTGCTG+GGG 0.553044 2.1:+72142118 None:intergenic
GACACGCGAGATCTATGAGC+AGG 0.553163 2.1:-72142603 MS.gene047509:CDS
CAGCTTCTTAATTCTCTCAA+GGG 0.553692 2.1:+72141842 None:intergenic
CGACAAAAGAGAGAAAAGTT+GGG 0.555367 2.1:-72142097 MS.gene047509:CDS
TTAGCATATTGCAGATAGAG+AGG 0.558079 2.1:+72142764 None:intergenic
CCGCGGATCAGCAAACTTGG+AGG 0.558477 2.1:+72142469 None:intergenic
GCTGAGTATTATATTAGGAG+GGG 0.558985 2.1:-72147215 MS.gene047509:CDS
TCCCGATTGAAACCTCACTT+AGG 0.559228 2.1:-72147523 MS.gene047509:CDS
GAAAATAATGAAGTAGATGA+TGG 0.560827 2.1:-72141900 MS.gene047509:CDS
TAGACGAGATCGTCTTCTGA+TGG 0.561308 2.1:+72147956 None:intergenic
CCCTAAGTGAGGTTTCAATC+GGG 0.562396 2.1:+72147522 None:intergenic
AAGACAAGTTAAAGGAGGCT+GGG 0.562734 2.1:-72142181 MS.gene047509:CDS
GTGGATGCCATTATTAGGGG+TGG 0.563505 2.1:-72147284 MS.gene047509:CDS
TGGATGCCATTATTAGGGGT+GGG 0.563795 2.1:-72147283 MS.gene047509:CDS
TGGGTTTGTAAGTGCTGGAG+TGG 0.564629 2.1:-72142078 MS.gene047509:CDS
TAGGAGGGGTTTGCATGAGA+AGG 0.564810 2.1:-72147201 MS.gene047509:CDS
AAGGATAATGAAAGTCGGCT+TGG 0.567936 2.1:-72141867 MS.gene047509:CDS
TAAGTGAGAATCTGCTTAGT+CGG 0.570214 2.1:+72146753 None:intergenic
TGTTGATCCCATGAAGGCAG+TGG 0.572215 2.1:-72146712 MS.gene047509:CDS
GGCTAGAGATGTCTTTGAGG+AGG 0.573165 2.1:-72147180 MS.gene047509:CDS
GTCGACTGTTATTACTGTGA+GGG 0.573947 2.1:-72147153 MS.gene047509:CDS
TGTCTCTGCAAGCTACAGCC+AGG 0.577332 2.1:-72142354 MS.gene047509:intron
CCACCATAGTTTGAGACTGA+AGG 0.578856 2.1:+72147910 None:intergenic
ATAATGTTGAACAGTGGCAC+CGG 0.581022 2.1:-72146800 MS.gene047509:CDS
GATCGTCTTCTGATGGGTAG+AGG 0.581259 2.1:+72147963 None:intergenic
CCTCCAAGTTTGCTGATCCG+CGG 0.581633 2.1:-72142469 MS.gene047509:CDS
TCCTTCTGCATCAGATACTC+GGG 0.585287 2.1:+72142230 None:intergenic
GGGAAGACCTCATACGCTAT+GGG 0.587279 2.1:-72146691 MS.gene047509:CDS
GGCAAATACATATACTCCAC+GGG 0.587629 2.1:+72142490 None:intergenic
GCTGACTAGGCATGCAAATG+AGG 0.588389 2.1:-72147321 MS.gene047509:CDS
TGACAAGAAGGAATTTGTGA+AGG 0.589340 2.1:-72146958 MS.gene047509:CDS
GTGGAATCACAGTCCGATGG+AGG 0.589725 2.1:-72142059 MS.gene047509:CDS
GATGAAGGAGAAGGAAGATG+AGG 0.590002 2.1:-72147021 MS.gene047509:CDS
TACAGCAGAGCCATCAGTTG+AGG 0.591172 2.1:-72146487 MS.gene047509:CDS
ATTGATTATTATTTGTGGTG+TGG 0.594022 2.1:+72146190 None:intergenic
GTATGATCCGAATCATATTG+AGG 0.595662 2.1:-72147480 MS.gene047509:CDS
GGCATGCAAATGAGGTGTCA+GGG 0.596852 2.1:-72147313 MS.gene047509:CDS
AGACGAGATCGTCTTCTGAT+GGG 0.597950 2.1:+72147957 None:intergenic
TTTATCATCATTCAAAACAG+AGG 0.598242 2.1:+72147400 None:intergenic
AGGTAGTTTGGAGTCTACTC+GGG 0.598887 2.1:-72146246 MS.gene047509:CDS
AGGTTTCACTTGATCAGCTG+GGG 0.601983 2.1:+72142784 None:intergenic
ACGAAATGGCTGCTTTGGAA+AGG 0.602105 2.1:-72142148 MS.gene047509:CDS
TTAAGGGGAAGACGAAACAT+AGG 0.608893 2.1:-72147367 MS.gene047509:CDS
AAGCAGCCATTTCGTCCTCA+GGG 0.611046 2.1:+72142156 None:intergenic
TGTTCGTTTCAAATTCGATG+TGG 0.611353 2.1:-72146985 MS.gene047509:CDS
ATGTTGAACAGTGGCACCGG+AGG 0.613836 2.1:-72146797 MS.gene047509:CDS
AGATACATAATCCAAACCCT+AGG 0.614428 2.1:+72147677 None:intergenic
GTTGATCCCATGAAGGCAGT+GGG 0.622072 2.1:-72146711 MS.gene047509:CDS
GGAGTGGAATCACAGTCCGA+TGG 0.622467 2.1:-72142062 MS.gene047509:CDS
AAGAGAAGGATAATGAAAGT+CGG 0.622772 2.1:-72141872 MS.gene047509:CDS
TCGTGCTGCTGAGATATTTG+GGG 0.624588 2.1:-72142633 MS.gene047509:CDS
GGAGAAATTGAACGTGCCCG+TGG 0.629146 2.1:-72142506 MS.gene047509:CDS
ACATTGACTTGAGATTGGCC+CGG 0.629436 2.1:-72146887 MS.gene047509:CDS
CAATTTCGAGGCGCTCACGA+AGG 0.629966 2.1:+72147783 None:intergenic
GCTAGAGATGTCTTTGAGGA+GGG 0.631187 2.1:-72147179 MS.gene047509:CDS
CAATTATGCATACTTTCTGG+AGG 0.631440 2.1:-72146171 MS.gene047509:intron
AGGCAAATACATATACTCCA+CGG 0.634626 2.1:+72142489 None:intergenic
CTACTCGGGAAGTTTATGAA+CGG 0.635173 2.1:-72146232 MS.gene047509:CDS
CCTCACTTAGGGTTTATCGT+AGG 0.646806 2.1:-72147511 MS.gene047509:CDS
TAAGCAGATTCTCACTTACA+CGG 0.648613 2.1:-72146748 MS.gene047509:CDS
ACCATAGTTTGAGACTGAAG+GGG 0.649422 2.1:+72147912 None:intergenic
TTGACTACCTAATGGAGAGG+AGG 0.649463 2.1:-72146863 MS.gene047509:CDS
TGGAATCACAGTCCGATGGA+GGG 0.650024 2.1:-72142058 MS.gene047509:CDS
CCTTCAGTCTCAAACTATGG+TGG 0.650162 2.1:-72147910 MS.gene047509:CDS
TGTTGAACAGTGGCACCGGA+GGG 0.653564 2.1:-72146796 MS.gene047509:CDS
GCCCGAGTATCTGATGCAGA+AGG 0.655224 2.1:-72142231 MS.gene047509:CDS
GGCCAAAGACAAGTTAAAGG+AGG 0.656443 2.1:-72142186 MS.gene047509:CDS
TGAGGTGTCAGGGTTGAATG+TGG 0.664619 2.1:-72147303 MS.gene047509:CDS
GGACCAAACAGTGAATCTTG+AGG 0.666439 2.1:-72142210 MS.gene047509:CDS
TGTCGACTGTTATTACTGTG+AGG 0.673645 2.1:-72147154 MS.gene047509:CDS
AAGACCTCATACGCTATGGG+TGG 0.674575 2.1:-72146688 MS.gene047509:CDS
CCAAACAGTGAATCTTGAGG+AGG 0.675893 2.1:-72142207 MS.gene047509:CDS
TCACTTACACGGAGGCTGTG+AGG 0.682337 2.1:-72146737 MS.gene047509:CDS
AATGTGGATGCCATTATTAG+GGG 0.684249 2.1:-72147287 MS.gene047509:CDS
GGTTTGACTACCTAATGGAG+AGG 0.691078 2.1:-72146866 MS.gene047509:CDS
CAAAAGTCTGGATCAGACCG+CGG 0.698770 2.1:+72142452 None:intergenic
GCAGGTGAACTACAAAACTG+TGG 0.704989 2.1:-72146598 MS.gene047509:CDS
CCTACGATAAACCCTAAGTG+AGG 0.707319 2.1:+72147511 None:intergenic
GAGGACTGTTGATCCCATGA+AGG 0.709712 2.1:-72146718 MS.gene047509:CDS
ACCCACATAATGTTGAACAG+TGG 0.718614 2.1:-72146806 MS.gene047509:CDS
AAAGGAGGCTGGGATCCCTG+AGG 0.730747 2.1:-72142171 MS.gene047509:CDS
AATTTGTGAAGAGATATGGA+AGG 0.730753 2.1:-72145946 MS.gene047509:CDS
GCAGATTCTCACTTACACGG+AGG 0.789180 2.1:-72146745 MS.gene047509:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTAATTATAATATTTTGTA+TGG - chr2.1:72144116-72144135 MS.gene047509:intron 10.0%
!! ATCTATAAATGAATGTAAAA+TGG + chr2.1:72144546-72144565 None:intergenic 15.0%
!! CATATTGTGAAAAATAAAAT+GGG + chr2.1:72143385-72143404 None:intergenic 15.0%
!! GTTATATCATAATCTATATT+GGG + chr2.1:72146684-72146703 None:intergenic 15.0%
!! TAGATTATGATATAACATTA+TGG - chr2.1:72146688-72146707 MS.gene047509:CDS 15.0%
!! TATTAAATACACAACTTATT+CGG - chr2.1:72146138-72146157 MS.gene047509:intron 15.0%
!! TGTTATATCATAATCTATAT+TGG + chr2.1:72146685-72146704 None:intergenic 15.0%
!! TTATGTAGAATTTATTGAAT+TGG - chr2.1:72144974-72144993 MS.gene047509:intron 15.0%
!!! ATAAATTTTATTCGATTAAG+GGG - chr2.1:72142431-72142450 MS.gene047509:CDS 15.0%
!!! GATAAATTTTATTCGATTAA+GGG - chr2.1:72142430-72142449 MS.gene047509:CDS 15.0%
!!! GATTTAGAAATTGATTTTTT+TGG + chr2.1:72144853-72144872 None:intergenic 15.0%
!!! GATTTTATATCATTTAATGT+GGG + chr2.1:72144667-72144686 None:intergenic 15.0%
!!! TAAATGATTTTGATTTATGT+AGG - chr2.1:72143745-72143764 MS.gene047509:intron 15.0%
!!! TGATAAATTTTATTCGATTA+AGG - chr2.1:72142429-72142448 MS.gene047509:CDS 15.0%
!!! TGATTTTATATCATTTAATG+TGG + chr2.1:72144668-72144687 None:intergenic 15.0%
!!! TGCTCTATTTTTTTTTTTTT+TGG - chr2.1:72143403-72143422 MS.gene047509:intron 15.0%
!!! TTAAAATAACTAAAGTTTTC+AGG + chr2.1:72144172-72144191 None:intergenic 15.0%
!! AAAAAAATTGATATGTTACG+TGG + chr2.1:72145954-72145973 None:intergenic 20.0%
!! AAAAAATTGATATGTTACGT+GGG + chr2.1:72145953-72145972 None:intergenic 20.0%
!! AAAAGAGAAACTATAATTTC+AGG + chr2.1:72145769-72145788 None:intergenic 20.0%
!! AAATGAAGAAAATAATCATG+AGG + chr2.1:72145142-72145161 None:intergenic 20.0%
!! AAATTACAAAGAATAGTTGA+AGG + chr2.1:72144364-72144383 None:intergenic 20.0%
!! AACTAAGTATAAATAACACA+AGG - chr2.1:72145273-72145292 MS.gene047509:intron 20.0%
!! ATAAAATCCTCAATATGATT+CGG + chr2.1:72142343-72142362 None:intergenic 20.0%
!! ATAAAGAATTGTTCTTTGAT+GGG - chr2.1:72146077-72146096 MS.gene047509:intron 20.0%
!! ATGACAGTAATGAAAATATT+AGG - chr2.1:72146631-72146650 MS.gene047509:CDS 20.0%
!! GCATAATTGATTATTATTTG+TGG + chr2.1:72143631-72143650 None:intergenic 20.0%
!! GCATATTGTGAAAAATAAAA+TGG + chr2.1:72143386-72143405 None:intergenic 20.0%
!! TGAATATATTAATGGAAATC+TGG + chr2.1:72145119-72145138 None:intergenic 20.0%
!!! ATTTGTTATCACCAAAATAT+AGG - chr2.1:72145352-72145371 MS.gene047509:intron 20.0%
!!! GTGTTATTTATACTTAGTTT+TGG + chr2.1:72145272-72145291 None:intergenic 20.0%
!!! GTTATTTTAACATAAAGCAT+TGG - chr2.1:72144182-72144201 MS.gene047509:intron 20.0%
!!! TATATTTTACATTACACTCT+AGG + chr2.1:72146478-72146497 None:intergenic 20.0%
!!! TCATGTTAAGGTATTATTAA+AGG - chr2.1:72144939-72144958 MS.gene047509:intron 20.0%
!!! TGAACTGTTTCTAAAATTAA+AGG + chr2.1:72146288-72146307 None:intergenic 20.0%
!!! TGTTTTTATACCCTATATTT+TGG + chr2.1:72145366-72145385 None:intergenic 20.0%
!!! TTCATTTTGACAACAAAAAT+AGG + chr2.1:72146601-72146620 None:intergenic 20.0%
!!! TTTAAGTACAATATCTCTTT+TGG - chr2.1:72143683-72143702 MS.gene047509:intron 20.0%
!!! TTTGTTATCACCAAAATATA+GGG - chr2.1:72145353-72145372 MS.gene047509:intron 20.0%
!!! TTTTAGAAACAGTTCAATTT+AGG - chr2.1:72146292-72146311 MS.gene047509:CDS 20.0%
! AAAAATTGATATGTTACGTG+GGG + chr2.1:72145952-72145971 None:intergenic 25.0%
! AAGATGAAGAAAATGAAGAT+GGG - chr2.1:72142770-72142789 MS.gene047509:CDS 25.0%
! AATAAAAAGAAGATGAAACC+TGG + chr2.1:72145588-72145607 None:intergenic 25.0%
! AATCAATTATGCATACTTTC+TGG - chr2.1:72143639-72143658 MS.gene047509:intron 25.0%
! ATATACAGATAGAAGAAGTA+TGG + chr2.1:72145203-72145222 None:intergenic 25.0%
! ATATGATCATATGACTATGA+AGG + chr2.1:72145651-72145670 None:intergenic 25.0%
! ATTGATTATTATTTGTGGTG+TGG + chr2.1:72143626-72143645 None:intergenic 25.0%
! CAAAGAACAATTCTTTATCT+TGG + chr2.1:72146075-72146094 None:intergenic 25.0%
! CTATCTGTATATACATATGT+GGG - chr2.1:72145211-72145230 MS.gene047509:intron 25.0%
! CTTCATTTCACTAGATATAT+TGG - chr2.1:72145800-72145819 MS.gene047509:intron 25.0%
! GAAAATAATGAAGTAGATGA+TGG - chr2.1:72147913-72147932 MS.gene047509:CDS 25.0%
! GATAAAGAATTGTTCTTTGA+TGG - chr2.1:72146076-72146095 MS.gene047509:intron 25.0%
! TAGATTCTCAATTCTGTTAT+AGG - chr2.1:72144561-72144580 MS.gene047509:intron 25.0%
! TCATGAGGTGAATATATTAA+TGG + chr2.1:72145127-72145146 None:intergenic 25.0%
! TCTAAATTTGTGAAGAGATA+TGG - chr2.1:72143863-72143882 MS.gene047509:intron 25.0%
! TCTATCTGTATATACATATG+TGG - chr2.1:72145210-72145229 MS.gene047509:intron 25.0%
! TGATCTATAAGATTAGGTAA+TGG - chr2.1:72145506-72145525 MS.gene047509:intron 25.0%
! TTAGATTGAATGAATTGATG+TGG - chr2.1:72144206-72144225 MS.gene047509:intron 25.0%
! TTATGTTGAATTGTATGAAC+CGG + chr2.1:72144286-72144305 None:intergenic 25.0%
! TTGAAACATGAGAATTTCAA+AGG - chr2.1:72143279-72143298 MS.gene047509:intron 25.0%
! TTTATCATCATTCAAAACAG+AGG + chr2.1:72142416-72142435 None:intergenic 25.0%
!! AAAAGCAGAAAATTGATGAT+GGG + chr2.1:72144093-72144112 None:intergenic 25.0%
!! AGATTTAGAGTTTAATGAGT+TGG - chr2.1:72146656-72146675 MS.gene047509:CDS 25.0%
!! ATCATAACTAGTATTTTCCT+TGG - chr2.1:72146870-72146889 MS.gene047509:CDS 25.0%
!! ATGCTTAACTTTTCATTGTT+TGG + chr2.1:72147142-72147161 None:intergenic 25.0%
!! GAAAATTTGAGACATCAAAT+GGG + chr2.1:72144790-72144809 None:intergenic 25.0%
!! TATAGGAAATTGACTCTAAA+AGG - chr2.1:72144578-72144597 MS.gene047509:intron 25.0%
!! TGAAAATTTGAGACATCAAA+TGG + chr2.1:72144791-72144810 None:intergenic 25.0%
!! TTTTCATTGTAAAACCTCAA+TGG - chr2.1:72144805-72144824 MS.gene047509:intron 25.0%
!!! ATACTTTGAAGATGCTTTTA+AGG - chr2.1:72143775-72143794 MS.gene047509:intron 25.0%
!!! ATGCTTTTAAGGTTTATGAA+AGG - chr2.1:72143786-72143805 MS.gene047509:intron 25.0%
!!! CTTCTTTTTATTTGTTCTTC+TGG - chr2.1:72145596-72145615 MS.gene047509:intron 25.0%
!!! TGCTTTTAAGGTTTATGAAA+GGG - chr2.1:72143787-72143806 MS.gene047509:intron 25.0%
!!! TTGTTTTTCGTTAGTCAAAA+GGG - chr2.1:72142265-72142284 MS.gene047509:intron 25.0%
!!! TTTGTTTTTCGTTAGTCAAA+AGG - chr2.1:72142264-72142283 MS.gene047509:intron 25.0%
!!! TTTTGATTAATTCCAGTCTT+TGG - chr2.1:72142368-72142387 MS.gene047509:CDS 25.0%
AAAATTAGCAAAGTATGTGC+TGG - chr2.1:72145241-72145260 MS.gene047509:intron 30.0%
AAAATTGATATGTTACGTGG+GGG + chr2.1:72145951-72145970 None:intergenic 30.0%
AAGAGAAGGATAATGAAAGT+CGG - chr2.1:72147941-72147960 MS.gene047509:CDS 30.0%
AAGCAAGCTTAAGAATTTCT+TGG - chr2.1:72145836-72145855 MS.gene047509:intron 30.0%
AATTTGTGAAGAGATATGGA+AGG - chr2.1:72143867-72143886 MS.gene047509:intron 30.0%
ACATTAGACTTGATGAAATC+TGG - chr2.1:72145045-72145064 MS.gene047509:intron 30.0%
ACCCAAATATCTTTAACATG+TGG + chr2.1:72143833-72143852 None:intergenic 30.0%
ACCCACATGTTAAAGATATT+TGG - chr2.1:72143828-72143847 MS.gene047509:intron 30.0%
AGCAAGCTTAAGAATTTCTT+GGG - chr2.1:72145837-72145856 MS.gene047509:intron 30.0%
ATAAAAACAGCATCTCTGTA+AGG - chr2.1:72145377-72145396 MS.gene047509:intron 30.0%
ATAGATCATTACAAGTCCTA+AGG + chr2.1:72145472-72145491 None:intergenic 30.0%
ATCGAAACATTATAGTAACC+TGG + chr2.1:72147480-72147499 None:intergenic 30.0%
ATGCAAACGAATCAATGATA+AGG + chr2.1:72147517-72147536 None:intergenic 30.0%
ATTACTCTAACAGAATGCAA+AGG + chr2.1:72144504-72144523 None:intergenic 30.0%
CCCAAATATCTTTAACATGT+GGG + chr2.1:72143832-72143851 None:intergenic 30.0%
CCCACATGTTAAAGATATTT+GGG - chr2.1:72143829-72143848 MS.gene047509:intron 30.0%
GAAAAGCAGAAAATTGATGA+TGG + chr2.1:72144094-72144113 None:intergenic 30.0%
GAAGATGAAGAAAATGAAGA+TGG - chr2.1:72142769-72142788 MS.gene047509:CDS 30.0%
GAGAAATGCTTCGAATTAAA+AGG - chr2.1:72147434-72147453 MS.gene047509:CDS 30.0%
GGCATATGATCTATAAGATT+AGG - chr2.1:72145500-72145519 MS.gene047509:intron 30.0%
GGTCATATAGAAAATATCAC+AGG + chr2.1:72144072-72144091 None:intergenic 30.0%
GTTATTGAGCGTTTCAAATT+GGG + chr2.1:72142080-72142099 None:intergenic 30.0%
TAAAAACAGCATCTCTGTAA+GGG - chr2.1:72145378-72145397 MS.gene047509:intron 30.0%
TACTATGCATAAAATGCCTA+GGG - chr2.1:72142120-72142139 MS.gene047509:CDS 30.0%
TATATTCAATTACCCAGCTT+TGG + chr2.1:72145546-72145565 None:intergenic 30.0%
TATTCTTTATCACAGTAAGC+AGG - chr2.1:72145169-72145188 MS.gene047509:intron 30.0%
TCCATATAGAATAGTGAGAA+AGG + chr2.1:72144617-72144636 None:intergenic 30.0%
TCCTTTCTCACTATTCTATA+TGG - chr2.1:72144613-72144632 MS.gene047509:intron 30.0%
TGCTGAGTATTATATTAGGA+GGG - chr2.1:72142597-72142616 MS.gene047509:CDS 30.0%
TGTGAAGGAATTTAAGAAGA+CGG - chr2.1:72142870-72142889 MS.gene047509:intron 30.0%
TGTTATTGAGCGTTTCAAAT+TGG + chr2.1:72142081-72142100 None:intergenic 30.0%
TTACTATGCATAAAATGCCT+AGG - chr2.1:72142119-72142138 MS.gene047509:CDS 30.0%
TTAGAACTATGACTTCCAAA+GGG + chr2.1:72145890-72145909 None:intergenic 30.0%
TTATAGATCATATGCCAAGT+GGG + chr2.1:72145496-72145515 None:intergenic 30.0%
TTCCTCCAAATCAACATAAA+AGG + chr2.1:72143542-72143561 None:intergenic 30.0%
TTCTAAGCAATATGTGATTG+TGG - chr2.1:72145904-72145923 MS.gene047509:CDS 30.0%
TTGCTGAGTATTATATTAGG+AGG - chr2.1:72142596-72142615 MS.gene047509:CDS 30.0%
TTTGACAACAAAAATAGGTG+CGG + chr2.1:72146596-72146615 None:intergenic 30.0%
TTTGTTCATTTCATTGTCTG+TGG - chr2.1:72145017-72145036 MS.gene047509:intron 30.0%
! AAAACCAAAGTGATGTCTTT+TGG + chr2.1:72146344-72146363 None:intergenic 30.0%
! AATTCGAAGCATTTCTCTAA+AGG + chr2.1:72147431-72147450 None:intergenic 30.0%
! CAAGCTCTAACATAAGAAAT+CGG + chr2.1:72144398-72144417 None:intergenic 30.0%
! TCATCAGAATCATTTTCTTC+TGG + chr2.1:72147817-72147836 None:intergenic 30.0%
! TCTATAAGATTAGGTAATGG+AGG - chr2.1:72145509-72145528 MS.gene047509:intron 30.0%
! TCTATGACAAGATCTTTTGA+GGG + chr2.1:72146023-72146042 None:intergenic 30.0%
! TCTTTTGGATTTTACTCTGA+TGG - chr2.1:72143698-72143717 MS.gene047509:intron 30.0%
! TGTTGACTAAGATCATGTTA+AGG - chr2.1:72144927-72144946 MS.gene047509:intron 30.0%
! TTCTATGACAAGATCTTTTG+AGG + chr2.1:72146024-72146043 None:intergenic 30.0%
!! ATTTTGGTGATAACAAATGC+AGG + chr2.1:72145350-72145369 None:intergenic 30.0%
!! TGAATTGGTTTGAGAGTTAA+GGG - chr2.1:72144989-72145008 MS.gene047509:intron 30.0%
!! TGCATAAATCTTTGAGATTG+TGG - chr2.1:72143515-72143534 MS.gene047509:intron 30.0%
!! TGCTAACACAATTTGCTTTT+TGG - chr2.1:72146986-72147005 MS.gene047509:CDS 30.0%
!! TTAAGAAGACGGTTTTATCT+GGG - chr2.1:72142881-72142900 MS.gene047509:intron 30.0%
!! TTGAATTGGTTTGAGAGTTA+AGG - chr2.1:72144988-72145007 MS.gene047509:intron 30.0%
!! TTTAAGAAGACGGTTTTATC+TGG - chr2.1:72142880-72142899 MS.gene047509:intron 30.0%
!! TTTTTGGTGTGTTTGTTGAA+TGG - chr2.1:72143419-72143438 MS.gene047509:intron 30.0%
!!! ATAGTTTTGACATCCTTATC+TGG + chr2.1:72147253-72147272 None:intergenic 30.0%
!!! ATATTCTGCGTTACTTTTAG+TGG - chr2.1:72143459-72143478 MS.gene047509:intron 30.0%
!!! ATTAGTTTTTATCCCTCCAT+CGG + chr2.1:72147770-72147789 None:intergenic 30.0%
!!! CTTTTGGTTCTCACTATAAT+GGG + chr2.1:72146328-72146347 None:intergenic 30.0%
!!! GCTTTGTCTAGTTTTGAATT+TGG + chr2.1:72144691-72144710 None:intergenic 30.0%
!!! GCTTTTAAGGTTTATGAAAG+GGG - chr2.1:72143788-72143807 MS.gene047509:intron 30.0%
!!! TCTTTTGGTTCTCACTATAA+TGG + chr2.1:72146329-72146348 None:intergenic 30.0%
AAAGCAAAAGAGGACAATGT+TGG + chr2.1:72146448-72146467 None:intergenic 35.0%
AAATTGATATGTTACGTGGG+GGG + chr2.1:72145950-72145969 None:intergenic 35.0%
AATGAGCTTGTGATGCAAAA+TGG + chr2.1:72144473-72144492 None:intergenic 35.0%
AATGTGGATGCCATTATTAG+GGG - chr2.1:72142526-72142545 MS.gene047509:CDS 35.0%
AGAAAATGAAGATGGGATGA+AGG - chr2.1:72142777-72142796 MS.gene047509:CDS 35.0%
AGAACCAAAAGACATCACTT+TGG - chr2.1:72146337-72146356 MS.gene047509:CDS 35.0%
AGAATGTTTCTCTGGTATGT+TGG - chr2.1:72145702-72145721 MS.gene047509:intron 35.0%
AGATACATAATCCAAACCCT+AGG + chr2.1:72142139-72142158 None:intergenic 35.0%
AGGATTACCAAAAGCAAAAG+AGG + chr2.1:72146458-72146477 None:intergenic 35.0%
AGGCAAATACATATACTCCA+CGG + chr2.1:72147327-72147346 None:intergenic 35.0%
CAAATTGGGAATGTGTGATT+GGG + chr2.1:72142066-72142085 None:intergenic 35.0%
CAAGCTTAAGAATTTCTTGG+GGG - chr2.1:72145839-72145858 MS.gene047509:intron 35.0%
CAATTATGCATACTTTCTGG+AGG - chr2.1:72143642-72143661 MS.gene047509:intron 35.0%
CACACAGCATGATAGAATTT+GGG - chr2.1:72142234-72142253 MS.gene047509:CDS 35.0%
CAGCATTTAGACAGTGAATA+TGG - chr2.1:72144324-72144343 MS.gene047509:intron 35.0%
CAGCTTCTTAATTCTCTCAA+GGG + chr2.1:72147974-72147993 None:intergenic 35.0%
CATATGACTATGAAGGAGAA+AGG + chr2.1:72145644-72145663 None:intergenic 35.0%
CATTGTAAAACCTCAATGGA+TGG - chr2.1:72144809-72144828 MS.gene047509:intron 35.0%
CGACAAAAGAGAGAAAAGTT+GGG - chr2.1:72147716-72147735 MS.gene047509:CDS 35.0%
CTGAATTGAACCAAACTCTA+CGG + chr2.1:72146220-72146239 None:intergenic 35.0%
CTGGTAACTCAATTTCTTCA+TGG + chr2.1:72147798-72147817 None:intergenic 35.0%
CTTAGAACTATGACTTCCAA+AGG + chr2.1:72145891-72145910 None:intergenic 35.0%
CTTATAGATCATATGCCAAG+TGG + chr2.1:72145497-72145516 None:intergenic 35.0%
GAATGATTGGCATGAATTTG+AGG - chr2.1:72147384-72147403 MS.gene047509:CDS 35.0%
GAATGTGGATGCCATTATTA+GGG - chr2.1:72142525-72142544 MS.gene047509:CDS 35.0%
GAGATATGGAAGGACAAAAT+TGG - chr2.1:72143877-72143896 MS.gene047509:intron 35.0%
GCAAGCTTAAGAATTTCTTG+GGG - chr2.1:72145838-72145857 MS.gene047509:intron 35.0%
GCATAGAAACATATTGAACC+AGG - chr2.1:72145567-72145586 MS.gene047509:intron 35.0%
GCTGAGTATTATATTAGGAG+GGG - chr2.1:72142598-72142617 MS.gene047509:CDS 35.0%
GTATGATCCGAATCATATTG+AGG - chr2.1:72142333-72142352 MS.gene047509:intron 35.0%
GTCAAAAATAACTCGAGCAT+TGG + chr2.1:72143187-72143206 None:intergenic 35.0%
TAAGCAGATTCTCACTTACA+CGG - chr2.1:72143065-72143084 MS.gene047509:intron 35.0%
TAAGTGAGAATCTGCTTAGT+CGG + chr2.1:72143063-72143082 None:intergenic 35.0%
TCAAATTGGGAATGTGTGAT+TGG + chr2.1:72142067-72142086 None:intergenic 35.0%
TCACACAGCATGATAGAATT+TGG - chr2.1:72142233-72142252 MS.gene047509:CDS 35.0%
TCACATACTACAATGAACCA+AGG + chr2.1:72146890-72146909 None:intergenic 35.0%
TCAGCTTCTTAATTCTCTCA+AGG + chr2.1:72147975-72147994 None:intergenic 35.0%
TGAATGTGGATGCCATTATT+AGG - chr2.1:72142524-72142543 MS.gene047509:CDS 35.0%
TGACAAGAAGGAATTTGTGA+AGG - chr2.1:72142855-72142874 MS.gene047509:intron 35.0%
TGTTCGTTTCAAATTCGATG+TGG - chr2.1:72142828-72142847 MS.gene047509:intron 35.0%
TTAGCATATTGCAGATAGAG+AGG + chr2.1:72147052-72147071 None:intergenic 35.0%
TTATTCGGATGTTTGCAATC+AGG - chr2.1:72146153-72146172 MS.gene047509:intron 35.0%
! AACAACACTTACATTGACTG+TGG - chr2.1:72146384-72146403 MS.gene047509:intron 35.0%
! AATTTGAGACATCAAATGGG+AGG + chr2.1:72144787-72144806 None:intergenic 35.0%
! ACATTGTCCTCTTTTGCTTT+TGG - chr2.1:72146448-72146467 MS.gene047509:intron 35.0%
! CATGAATTTGAGGTTCAACA+TGG - chr2.1:72147394-72147413 MS.gene047509:CDS 35.0%
! CGCTTGCTGAGTATTATATT+AGG - chr2.1:72142593-72142612 MS.gene047509:CDS 35.0%
! GCTTTTATAAAGCCAAAGCT+GGG - chr2.1:72145531-72145550 MS.gene047509:intron 35.0%
! GGATTTTACTCTGATGGTTT+TGG - chr2.1:72143704-72143723 MS.gene047509:intron 35.0%
! GTCAATGTAAGTGTTGTTCA+TGG + chr2.1:72146382-72146401 None:intergenic 35.0%
! GTGGTTGTTGATTATTCCTT+AGG - chr2.1:72145453-72145472 MS.gene047509:intron 35.0%
!! ACAAGATCTTTTGAGGGAAA+AGG + chr2.1:72146017-72146036 None:intergenic 35.0%
!! ATCTTTTGAGGGAAAAGGTT+TGG + chr2.1:72146012-72146031 None:intergenic 35.0%
!! ATGATGAAGCGCTTTTTGAA+AGG + chr2.1:72141956-72141975 None:intergenic 35.0%
!! CCGCTTCTAAAACTAAAGAA+CGG + chr2.1:72146258-72146277 None:intergenic 35.0%
!! CGCTTCTAAAACTAAAGAAC+GGG + chr2.1:72146257-72146276 None:intergenic 35.0%
!! GAATGACATTGACTTGAGAT+TGG - chr2.1:72142921-72142940 MS.gene047509:intron 35.0%
!! GAATTGGTTTGAGAGTTAAG+GGG - chr2.1:72144990-72145009 MS.gene047509:intron 35.0%
!! GAGTATGCTTGCTTTTAAGA+TGG - chr2.1:72142723-72142742 MS.gene047509:CDS 35.0%
!! GGAAGTTTATGAACGGATTT+TGG - chr2.1:72143588-72143607 MS.gene047509:intron 35.0%
!! GTGGACCTTTTATGTTGATT+TGG - chr2.1:72143534-72143553 MS.gene047509:intron 35.0%
!! TTTTAAGAAGCAGATGATGG+TGG - chr2.1:72145434-72145453 MS.gene047509:intron 35.0%
!!! ATCCAGACTTTTGGAATGAT+TGG - chr2.1:72147371-72147390 MS.gene047509:CDS 35.0%
!!! CCGTTCTTTAGTTTTAGAAG+CGG - chr2.1:72146255-72146274 MS.gene047509:CDS 35.0%
!!! GACCTTTTATGTTGATTTGG+AGG - chr2.1:72143537-72143556 MS.gene047509:intron 35.0%
!!! GAGTTTTAAGAAGCAGATGA+TGG - chr2.1:72145431-72145450 MS.gene047509:intron 35.0%
!!! TATGCTTGCTTTTAAGATGG+AGG - chr2.1:72142726-72142745 MS.gene047509:CDS 35.0%
!!! TGCTCGAGTTATTTTTGACA+AGG - chr2.1:72143188-72143207 MS.gene047509:intron 35.0%
!!! TGCTTTTAAGATGGAGGATA+TGG - chr2.1:72142732-72142751 MS.gene047509:CDS 35.0%
AAAGACAAGTTAAAGGAGGC+TGG - chr2.1:72147631-72147650 MS.gene047509:CDS 40.0%
AAAGTTGGGTTTGTAAGTGC+TGG - chr2.1:72147730-72147749 MS.gene047509:CDS 40.0%
AACAAGCTTCTGCTGAGTTA+GGG + chr2.1:72142167-72142186 None:intergenic 40.0%
AAGACAAGTTAAAGGAGGCT+GGG - chr2.1:72147632-72147651 MS.gene047509:CDS 40.0%
AAGGATAATGAAAGTCGGCT+TGG - chr2.1:72147946-72147965 MS.gene047509:CDS 40.0%
AATGGCGAAGTCTGTCAAAA+TGG + chr2.1:72144528-72144547 None:intergenic 40.0%
ACAGTGTCTTCTTTACTCTC+CGG - chr2.1:72144264-72144283 MS.gene047509:intron 40.0%
ACCCACATAATGTTGAACAG+TGG - chr2.1:72143007-72143026 MS.gene047509:intron 40.0%
ACCCTAAGTGAGGTTTCAAT+CGG + chr2.1:72142295-72142314 None:intergenic 40.0%
ACGAATCAATGATAAGGCTC+AGG + chr2.1:72147511-72147530 None:intergenic 40.0%
AGCACACTATTAGCCAATTC+AGG + chr2.1:72142976-72142995 None:intergenic 40.0%
AGCAGCACAAAGATATATGC+AGG + chr2.1:72144875-72144894 None:intergenic 40.0%
ATAATGTTGAACAGTGGCAC+CGG - chr2.1:72143013-72143032 MS.gene047509:intron 40.0%
ATCAAAAGTTCTTCGCGTTC+TGG + chr2.1:72142191-72142210 None:intergenic 40.0%
ATGGATGGTGAGTTCTCATA+TGG - chr2.1:72144824-72144843 MS.gene047509:intron 40.0%
ATTCTATCATGCTGTGTGAC+AGG + chr2.1:72142232-72142251 None:intergenic 40.0%
CTACAAAACTGTGGACAATC+TGG - chr2.1:72143224-72143243 MS.gene047509:intron 40.0%
CTACTCGGGAAGTTTATGAA+CGG - chr2.1:72143581-72143600 MS.gene047509:intron 40.0%
CTATCTGCAATATGCTAAGC+TGG - chr2.1:72147054-72147073 MS.gene047509:CDS 40.0%
GAACAACTTGTCTCTGTCAT+TGG - chr2.1:72146406-72146425 MS.gene047509:intron 40.0%
GATGATAGAGCAGCTGAAAA+TGG + chr2.1:72144718-72144737 None:intergenic 40.0%
GCCACTGTTCAACATTATGT+GGG + chr2.1:72143011-72143030 None:intergenic 40.0%
GCGACAAAAGAGAGAAAAGT+TGG - chr2.1:72147715-72147734 MS.gene047509:CDS 40.0%
GGCAAATACATATACTCCAC+GGG + chr2.1:72147326-72147345 None:intergenic 40.0%
GTCGACTGTTATTACTGTGA+GGG - chr2.1:72142660-72142679 MS.gene047509:CDS 40.0%
GTTTGAGAACGCAGTTGAAA+CGG - chr2.1:72143916-72143935 MS.gene047509:intron 40.0%
TAACAAGCTTCTGCTGAGTT+AGG + chr2.1:72142168-72142187 None:intergenic 40.0%
TACATCGATGATCTTAGAGC+TGG - chr2.1:72144009-72144028 MS.gene047509:intron 40.0%
TATGAGCAGGCAATTGAATC+TGG - chr2.1:72147223-72147242 MS.gene047509:CDS 40.0%
TCAGTTGAGGTCAAACGAAA+AGG - chr2.1:72143339-72143358 MS.gene047509:intron 40.0%
TCATACTACAACAACGACCA+AGG + chr2.1:72146756-72146775 None:intergenic 40.0%
TCTCCATTAGGTAGTCAAAC+CGG + chr2.1:72142948-72142967 None:intergenic 40.0%
TGAGGTTCAACATGGAAATG+AGG - chr2.1:72147402-72147421 MS.gene047509:CDS 40.0%
TGCATAAAATGCCTAGGGTT+TGG - chr2.1:72142125-72142144 MS.gene047509:CDS 40.0%
TGCATATATCTTTGTGCTGC+TGG - chr2.1:72144874-72144893 MS.gene047509:intron 40.0%
TGCCAATCATTCCAAAAGTC+TGG + chr2.1:72147376-72147395 None:intergenic 40.0%
TGCCACTGTTCAACATTATG+TGG + chr2.1:72143012-72143031 None:intergenic 40.0%
TGGATAATGCTTGCCAAAAC+AGG - chr2.1:72147006-72147025 MS.gene047509:CDS 40.0%
TGTAATGATCTATGCCCACT+TGG - chr2.1:72145479-72145498 MS.gene047509:intron 40.0%
TTAAGGGGAAGACGAAACAT+AGG - chr2.1:72142446-72142465 MS.gene047509:CDS 40.0%
TTATGCAGCTTCATCTGAAC+TGG + chr2.1:72143502-72143521 None:intergenic 40.0%
TTTCGTTTGACCTCAACTGA+TGG + chr2.1:72143339-72143358 None:intergenic 40.0%
! ACCATAGTTTGAGACTGAAG+GGG + chr2.1:72141904-72141923 None:intergenic 40.0%
! AGATGATGGTGCAAAAGAGA+AGG - chr2.1:72147927-72147946 MS.gene047509:CDS 40.0%
! ATGCATACTTTCTGGAGGTA+TGG - chr2.1:72143647-72143666 MS.gene047509:intron 40.0%
! CACCATAGTTTGAGACTGAA+GGG + chr2.1:72141905-72141924 None:intergenic 40.0%
! CATCACAAGCTCATTTTCCT+TGG - chr2.1:72144478-72144497 MS.gene047509:intron 40.0%
! GATTAGGAAGTTTTCGGATG+AGG - chr2.1:72142552-72142571 MS.gene047509:CDS 40.0%
! GGCTTTTATAAAGCCAAAGC+TGG - chr2.1:72145530-72145549 MS.gene047509:intron 40.0%
! GTGTTGTTCATGGTTCTGTT+CGG + chr2.1:72146372-72146391 None:intergenic 40.0%
! GTGTTTGAAGTATGCTGAAC+TGG - chr2.1:72147273-72147292 MS.gene047509:CDS 40.0%
! TACTTTTAGTGGCTGCTGAT+GGG - chr2.1:72143470-72143489 MS.gene047509:intron 40.0%
! TAGGTAGTTTGGAGTCTACT+CGG - chr2.1:72143566-72143585 MS.gene047509:intron 40.0%
! TCTGTCATTGGCTATAGTAG+TGG - chr2.1:72146418-72146437 MS.gene047509:intron 40.0%
! TGAATCTGGTCTTCCAGATA+AGG - chr2.1:72147237-72147256 MS.gene047509:CDS 40.0%
! TGTCGACTGTTATTACTGTG+AGG - chr2.1:72142659-72142678 MS.gene047509:CDS 40.0%
!! AGACGGTTTTATCTGGGTTT+TGG - chr2.1:72142887-72142906 MS.gene047509:intron 40.0%
!! AGCCTCCTTTAACTTGTCTT+TGG + chr2.1:72147632-72147651 None:intergenic 40.0%
!! AGCTCTAGAGAATGTTTCTC+TGG - chr2.1:72145694-72145713 MS.gene047509:intron 40.0%
!! AGTTGTGTGATTTGCTGACT+AGG - chr2.1:72142479-72142498 MS.gene047509:CDS 40.0%
!! GCGCTTTTTGAAAGGTGAAT+CGG + chr2.1:72141948-72141967 None:intergenic 40.0%
!! GTTGATTTGGAGGAAAGTCT+AGG - chr2.1:72143547-72143566 MS.gene047509:intron 40.0%
!! TATTTTTGACAAGGCAGTGC+AGG - chr2.1:72143197-72143216 MS.gene047509:intron 40.0%
!! TCAGAAGTATCCGTAGAGTT+TGG - chr2.1:72146207-72146226 MS.gene047509:CDS 40.0%
!! TTACTTTTAGTGGCTGCTGA+TGG - chr2.1:72143469-72143488 MS.gene047509:intron 40.0%
AAACCGCCAAAAACAGCAGA+AGG + chr2.1:72147871-72147890 None:intergenic 45.0%
AACCGCCAAAAACAGCAGAA+GGG + chr2.1:72147870-72147889 None:intergenic 45.0%
AAGGCTTATCCCACTAAGTG+GGG + chr2.1:72146737-72146756 None:intergenic 45.0%
ACCCCTTCAGTCTCAAACTA+TGG - chr2.1:72141900-72141919 MS.gene047509:CDS 45.0%
ACTAGCAAAGCGAGCTATGA+AGG - chr2.1:72147090-72147109 MS.gene047509:CDS 45.0%
AGACGAGATCGTCTTCTGAT+GGG + chr2.1:72141859-72141878 None:intergenic 45.0%
AGAGGTTTCACTTGATCAGC+TGG + chr2.1:72147034-72147053 None:intergenic 45.0%
AGGGATCAATCAACCCTCTA+TGG + chr2.1:72145871-72145890 None:intergenic 45.0%
AGGTTTCACTTGATCAGCTG+GGG + chr2.1:72147032-72147051 None:intergenic 45.0%
ATCAAGATTAGAGCTCGCCT+CGG + chr2.1:72144444-72144463 None:intergenic 45.0%
CAAGGCTTATCCCACTAAGT+GGG + chr2.1:72146738-72146757 None:intergenic 45.0%
CCAAACAGTGAATCTTGAGG+AGG - chr2.1:72147606-72147625 MS.gene047509:CDS 45.0%
CCATTATTAGGGGTGGGATT+AGG - chr2.1:72142536-72142555 MS.gene047509:CDS 45.0%
CCCGATTGAAACCTCACTTA+GGG - chr2.1:72142291-72142310 MS.gene047509:intron 45.0%
CCCTAAGTGAGGTTTCAATC+GGG + chr2.1:72142294-72142313 None:intergenic 45.0%
CCTAATCCCACCCCTAATAA+TGG + chr2.1:72142539-72142558 None:intergenic 45.0%
CCTACGATAAACCCTAAGTG+AGG + chr2.1:72142305-72142324 None:intergenic 45.0%
CCTCACTTAGGGTTTATCGT+AGG - chr2.1:72142302-72142321 MS.gene047509:intron 45.0%
CCTCCTCAAGATTCACTGTT+TGG + chr2.1:72147609-72147628 None:intergenic 45.0%
CCTTCAGTCTCAAACTATGG+TGG - chr2.1:72141903-72141922 MS.gene047509:CDS 45.0%
CGATGTGGATGTTGACAAGA+AGG - chr2.1:72142843-72142862 MS.gene047509:intron 45.0%
CTAACAGAATGCAAAGGCCA+AGG + chr2.1:72144498-72144517 None:intergenic 45.0%
CTCCATTAGGTAGTCAAACC+GGG + chr2.1:72142947-72142966 None:intergenic 45.0%
GAAGGCTAGAGATGTCTTTG+AGG - chr2.1:72142630-72142649 MS.gene047509:CDS 45.0%
GAGGTTTCACTTGATCAGCT+GGG + chr2.1:72147033-72147052 None:intergenic 45.0%
GATGAAGGAGAAGGAAGATG+AGG - chr2.1:72142792-72142811 MS.gene047509:intron 45.0%
GCAATATGCTAAGCTGGAAG+AGG - chr2.1:72147060-72147079 MS.gene047509:CDS 45.0%
GCAGGTGAACTACAAAACTG+TGG - chr2.1:72143215-72143234 MS.gene047509:intron 45.0%
GCTGAACTGGAAAGAAGCTT+GGG - chr2.1:72147286-72147305 MS.gene047509:CDS 45.0%
GGAAGACGAAACATAGGCTT+TGG - chr2.1:72142452-72142471 MS.gene047509:CDS 45.0%
GGACCAAACAGTGAATCTTG+AGG - chr2.1:72147603-72147622 MS.gene047509:CDS 45.0%
GGAGACTTCGAACAATTTCG+AGG + chr2.1:72142045-72142064 None:intergenic 45.0%
GGAGGAAAGTCTAGGTAGTT+TGG - chr2.1:72143555-72143574 MS.gene047509:intron 45.0%
GGAGGCCAAAGACAAGTTAA+AGG - chr2.1:72147624-72147643 MS.gene047509:CDS 45.0%
GGCCAAAGACAAGTTAAAGG+AGG - chr2.1:72147627-72147646 MS.gene047509:CDS 45.0%
GGTTTGACTACCTAATGGAG+AGG - chr2.1:72142947-72142966 MS.gene047509:intron 45.0%
GTCCTTCTGCATCAGATACT+CGG + chr2.1:72147587-72147606 None:intergenic 45.0%
TAGACGAGATCGTCTTCTGA+TGG + chr2.1:72141860-72141879 None:intergenic 45.0%
TAGAGCAGCTGAAAATGGCA+AGG + chr2.1:72144713-72144732 None:intergenic 45.0%
TCATAGATCTCGCGTGTCTT+GGG + chr2.1:72147208-72147227 None:intergenic 45.0%
TCCCGATTGAAACCTCACTT+AGG - chr2.1:72142290-72142309 MS.gene047509:intron 45.0%
TCCTTCTGCATCAGATACTC+GGG + chr2.1:72147586-72147605 None:intergenic 45.0%
TGAAGATGGGATGAAGGAGA+AGG - chr2.1:72142783-72142802 MS.gene047509:CDS 45.0%
TGAGAACTCACCATCCATTG+AGG + chr2.1:72144822-72144841 None:intergenic 45.0%
TGCTGAACTGGAAAGAAGCT+TGG - chr2.1:72147285-72147304 MS.gene047509:CDS 45.0%
TGGACAATCTGGCTAGTGTT+TGG - chr2.1:72143235-72143254 MS.gene047509:intron 45.0%
TGGATGCCATTATTAGGGGT+GGG - chr2.1:72142530-72142549 MS.gene047509:CDS 45.0%
TGTGATACACATCACAACCG+AGG - chr2.1:72144424-72144443 MS.gene047509:intron 45.0%
TTCCTGGAAGCTATAAGCTC+TGG - chr2.1:72141999-72142018 MS.gene047509:CDS 45.0%
TTGACTACCTAATGGAGAGG+AGG - chr2.1:72142950-72142969 MS.gene047509:intron 45.0%
TTGGGGGTTAAAGCCATAGA+GGG - chr2.1:72145855-72145874 MS.gene047509:intron 45.0%
! AGAGGGTTGATTGATCCCTT+TGG - chr2.1:72145872-72145891 MS.gene047509:intron 45.0%
! AGGAAGTTTTCGGATGAGGT+TGG - chr2.1:72142556-72142575 MS.gene047509:CDS 45.0%
! AGGTAGTTTGGAGTCTACTC+GGG - chr2.1:72143567-72143586 MS.gene047509:intron 45.0%
! ATCTTTGTGCTGCTGGTCTA+AGG - chr2.1:72144881-72144900 MS.gene047509:intron 45.0%
! CCACCATAGTTTGAGACTGA+AGG + chr2.1:72141906-72141925 None:intergenic 45.0%
! CTCGTGCTGCTGAGATATTT+GGG - chr2.1:72147179-72147198 MS.gene047509:CDS 45.0%
! GACGAAACATAGGCTTTGGT+TGG - chr2.1:72142456-72142475 MS.gene047509:CDS 45.0%
! GCTAGAGATGTCTTTGAGGA+GGG - chr2.1:72142634-72142653 MS.gene047509:CDS 45.0%
! GGCTTTTGCAAAGCTTTACG+AGG - chr2.1:72143146-72143165 MS.gene047509:intron 45.0%
! GGGTGGGATTAGGAAGTTTT+CGG - chr2.1:72142546-72142565 MS.gene047509:CDS 45.0%
! GTTCATGGTTCTGTTCGGAT+AGG + chr2.1:72146367-72146386 None:intergenic 45.0%
! TCGTGCTGCTGAGATATTTG+GGG - chr2.1:72147180-72147199 MS.gene047509:CDS 45.0%
!! AAGGAGCACTTGACCTAATG+AGG - chr2.1:72143298-72143317 MS.gene047509:intron 45.0%
!! ACATTGACTTGAGATTGGCC+CGG - chr2.1:72142926-72142945 MS.gene047509:intron 45.0%
!! ACGAAATGGCTGCTTTGGAA+AGG - chr2.1:72147665-72147684 MS.gene047509:CDS 45.0%
!! AGTTTTCGGATGAGGTTGGT+CGG - chr2.1:72142560-72142579 MS.gene047509:CDS 45.0%
!!! GATGTCCCTTCTGCTGTTTT+TGG - chr2.1:72147862-72147881 MS.gene047509:CDS 45.0%
!!! TTCTGCTGTTTTTGGCGGTT+TGG - chr2.1:72147870-72147889 MS.gene047509:CDS 45.0%
AAAGCAGCCATTTCGTCCTC+AGG + chr2.1:72147661-72147680 None:intergenic 50.0%
AAAGCCACCCATAGCGTATG+AGG + chr2.1:72143132-72143151 None:intergenic 50.0%
AAGACCTCATACGCTATGGG+TGG - chr2.1:72143125-72143144 MS.gene047509:intron 50.0%
AAGCAGCCATTTCGTCCTCA+GGG + chr2.1:72147660-72147679 None:intergenic 50.0%
AATGGAGAGGAGGCCTGAAT+TGG - chr2.1:72142960-72142979 MS.gene047509:intron 50.0%
AGCAGACTCTTGCCAAAGAC+TGG + chr2.1:72142383-72142402 None:intergenic 50.0%
ATTCAGGCCTCCTCTCCATT+AGG + chr2.1:72142960-72142979 None:intergenic 50.0%
CAAAAGTCTGGATCAGACCG+CGG + chr2.1:72147364-72147383 None:intergenic 50.0%
CCAAGGCTTATCCCACTAAG+TGG + chr2.1:72146739-72146758 None:intergenic 50.0%
CCACTTAGTGGGATAAGCCT+TGG - chr2.1:72146736-72146755 MS.gene047509:CDS 50.0%
CCTCAAAAAGCTTCACCCTC+CGG + chr2.1:72143035-72143054 None:intergenic 50.0%
CTCATAGATCTCGCGTGTCT+TGG + chr2.1:72147209-72147228 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr2.1:72146733-72146752 None:intergenic 50.0%
CTTGGGGGTTAAAGCCATAG+AGG - chr2.1:72145854-72145873 MS.gene047509:intron 50.0%
GAAGGAGAAGGAAGATGAGG+AGG - chr2.1:72142795-72142814 MS.gene047509:intron 50.0%
GAGGACTGTTGATCCCATGA+AGG - chr2.1:72143095-72143114 MS.gene047509:intron 50.0%
GCAAGAGTCTGCTGAGAGAT+TGG - chr2.1:72142390-72142409 MS.gene047509:CDS 50.0%
GCAGATTCTCACTTACACGG+AGG - chr2.1:72143068-72143087 MS.gene047509:intron 50.0%
GCTAAGCTGGAAGAGGACTA+TGG - chr2.1:72147067-72147086 MS.gene047509:CDS 50.0%
GCTGACTAGGCATGCAAATG+AGG - chr2.1:72142492-72142511 MS.gene047509:CDS 50.0%
GGGAAGACCTCATACGCTAT+GGG - chr2.1:72143122-72143141 MS.gene047509:intron 50.0%
GTGAATCGGAACGTGCGATT+AGG + chr2.1:72141934-72141953 None:intergenic 50.0%
GTGGATGCCATTATTAGGGG+TGG - chr2.1:72142529-72142548 MS.gene047509:CDS 50.0%
GTTGATCCCATGAAGGCAGT+GGG - chr2.1:72143102-72143121 MS.gene047509:intron 50.0%
TACAGCAGAGCCATCAGTTG+AGG - chr2.1:72143326-72143345 MS.gene047509:intron 50.0%
TAGGAGGGGTTTGCATGAGA+AGG - chr2.1:72142612-72142631 MS.gene047509:CDS 50.0%
TGAGGACGAAATGGCTGCTT+TGG - chr2.1:72147660-72147679 MS.gene047509:CDS 50.0%
TGCCAGAGCTTATAGCTTCC+AGG + chr2.1:72142004-72142023 None:intergenic 50.0%
TGGAATCACAGTCCGATGGA+GGG - chr2.1:72147755-72147774 MS.gene047509:CDS 50.0%
TGGGAAGACCTCATACGCTA+TGG - chr2.1:72143121-72143140 MS.gene047509:intron 50.0%
TGTTGATCCCATGAAGGCAG+TGG - chr2.1:72143101-72143120 MS.gene047509:intron 50.0%
! AGGCATGCAAATGAGGTGTC+AGG - chr2.1:72142499-72142518 MS.gene047509:CDS 50.0%
! CGGAGGGTGAAGCTTTTTGA+GGG - chr2.1:72143033-72143052 MS.gene047509:intron 50.0%
! GATCGTCTTCTGATGGGTAG+AGG + chr2.1:72141853-72141872 None:intergenic 50.0%
! GCTCGTGCTGCTGAGATATT+TGG - chr2.1:72147178-72147197 MS.gene047509:CDS 50.0%
! GGCATGCAAATGAGGTGTCA+GGG - chr2.1:72142500-72142519 MS.gene047509:CDS 50.0%
! GGCTAGAGATGTCTTTGAGG+AGG - chr2.1:72142633-72142652 MS.gene047509:CDS 50.0%
! TCGCTGCTTTGTCAACTGCT+GGG + chr2.1:72147699-72147718 None:intergenic 50.0%
! TGAGGTGTCAGGGTTGAATG+TGG - chr2.1:72142510-72142529 MS.gene047509:CDS 50.0%
!! GGCTAGTGTTTGGTGTGAGT+GGG - chr2.1:72143245-72143264 MS.gene047509:intron 50.0%
!! TGGCTAGTGTTTGGTGTGAG+TGG - chr2.1:72143244-72143263 MS.gene047509:intron 50.0%
!! TGGGTTTGTAAGTGCTGGAG+TGG - chr2.1:72147735-72147754 MS.gene047509:CDS 50.0%
!!! GTCCCTTCTGCTGTTTTTGG+CGG - chr2.1:72147865-72147884 MS.gene047509:CDS 50.0%
AGACCGCGGATCAGCAAACT+TGG + chr2.1:72147350-72147369 None:intergenic 55.0%
AGGTCTTCCCACTGCCTTCA+TGG + chr2.1:72143112-72143131 None:intergenic 55.0%
GACACGCGAGATCTATGAGC+AGG - chr2.1:72147210-72147229 MS.gene047509:CDS 55.0%
GCCCGAGTATCTGATGCAGA+AGG - chr2.1:72147582-72147601 MS.gene047509:CDS 55.0%
GGAGAAATTGAACGTGCCCG+TGG - chr2.1:72147307-72147326 MS.gene047509:CDS 55.0%
GGAGAAGGAAGATGAGGAGG+AGG - chr2.1:72142798-72142817 MS.gene047509:intron 55.0%
GGAGTGGAATCACAGTCCGA+TGG - chr2.1:72147751-72147770 MS.gene047509:CDS 55.0%
GGTCTTCCCACTGCCTTCAT+GGG + chr2.1:72143111-72143130 None:intergenic 55.0%
GTGGAATCACAGTCCGATGG+AGG - chr2.1:72147754-72147773 MS.gene047509:CDS 55.0%
TCACTTACACGGAGGCTGTG+AGG - chr2.1:72143076-72143095 MS.gene047509:intron 55.0%
TGGGATCCCTGAGGACGAAA+TGG - chr2.1:72147651-72147670 MS.gene047509:CDS 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr2.1:72146725-72146744 MS.gene047509:CDS 55.0%
TGTCTCTGCAAGCTACAGCC+AGG - chr2.1:72147459-72147478 MS.gene047509:CDS 55.0%
! ATGTTGAACAGTGGCACCGG+AGG - chr2.1:72143016-72143035 MS.gene047509:intron 55.0%
! CAATTTCGAGGCGCTCACGA+AGG + chr2.1:72142033-72142052 None:intergenic 55.0%
! CCGGAGGGTGAAGCTTTTTG+AGG - chr2.1:72143032-72143051 MS.gene047509:intron 55.0%
! CGCGGTCTGATCCAGACTTT+TGG - chr2.1:72147362-72147381 MS.gene047509:CDS 55.0%
! CGCTGCTTTGTCAACTGCTG+GGG + chr2.1:72147698-72147717 None:intergenic 55.0%
! GGCCCGGTTTGACTACCTAA+TGG - chr2.1:72142942-72142961 MS.gene047509:intron 55.0%
! GTCGCTGCTTTGTCAACTGC+TGG + chr2.1:72147700-72147719 None:intergenic 55.0%
! TGATCAGCTGGGGCCTGTTT+TGG + chr2.1:72147022-72147041 None:intergenic 55.0%
! TGTTGAACAGTGGCACCGGA+GGG - chr2.1:72143017-72143036 MS.gene047509:intron 55.0%
!! CCTCCAAGTTTGCTGATCCG+CGG - chr2.1:72147344-72147363 MS.gene047509:CDS 55.0%
!! CGCGCTCTAAAAGCACTTCC+TGG - chr2.1:72141983-72142002 MS.gene047509:CDS 55.0%
AAAGGAGGCTGGGATCCCTG+AGG - chr2.1:72147642-72147661 MS.gene047509:CDS 60.0%
CCGCGGATCAGCAAACTTGG+AGG + chr2.1:72147347-72147366 None:intergenic 60.0%
CTGCTGTAGCGCGCCTCATT+AGG + chr2.1:72143314-72143333 None:intergenic 60.0%
GTGTAGCCGACCCCACTTAG+TGG - chr2.1:72146724-72146743 MS.gene047509:CDS 60.0%
! CGGATGAGGTTGGTCGGTTG+TGG - chr2.1:72142566-72142585 MS.gene047509:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 72141830 72148005 72141830 ID=MS.gene047509
chr2.1 mRNA 72141830 72148005 72141830 ID=MS.gene047509.t1;Parent=MS.gene047509
chr2.1 exon 72146475 72148005 72146475 ID=MS.gene047509.t1.exon1;Parent=MS.gene047509.t1
chr2.1 CDS 72146475 72148005 72146475 ID=cds.MS.gene047509.t1;Parent=MS.gene047509.t1
chr2.1 exon 72146172 72146356 72146172 ID=MS.gene047509.t1.exon2;Parent=MS.gene047509.t1
chr2.1 CDS 72146172 72146356 72146172 ID=cds.MS.gene047509.t1;Parent=MS.gene047509.t1
chr2.1 exon 72145898 72146068 72145898 ID=MS.gene047509.t1.exon3;Parent=MS.gene047509.t1
chr2.1 CDS 72145898 72146068 72145898 ID=cds.MS.gene047509.t1;Parent=MS.gene047509.t1
chr2.1 exon 72142355 72142807 72142355 ID=MS.gene047509.t1.exon4;Parent=MS.gene047509.t1
chr2.1 CDS 72142355 72142807 72142355 ID=cds.MS.gene047509.t1;Parent=MS.gene047509.t1
chr2.1 exon 72141830 72142267 72141830 ID=MS.gene047509.t1.exon5;Parent=MS.gene047509.t1
chr2.1 CDS 72141830 72142267 72141830 ID=cds.MS.gene047509.t1;Parent=MS.gene047509.t1
Gene Sequence

>MS.gene047509

ATGGCGGCGATTTCATCTGACCTCTACCCATCAGAAGACGATCTCGTCTACGAAGAAGAACTTCTTCGCAACCCCTTCAGTCTCAAACTATGGTGGCGTTACCTAATCGCACGTTCCGATTCACCTTTCAAAAAGCGCTTCATCATCTACGAACGCGCTCTAAAAGCACTTCCTGGAAGCTATAAGCTCTGGCACGCTTACCTTCGTGAGCGCCTCGAAATTGTTCGAAGTCTCCCAATCACACATTCCCAATTTGAAACGCTCAATAACACGTTTGAACGTGCTCTTGTTACTATGCATAAAATGCCTAGGGTTTGGATTATGTATCTTCAAACCCTAACTCAGCAGAAGCTTGTTACCAGAACGCGAAGAACTTTTGATAGAGCTTTATGTGCACTTCCTGTCACACAGCATGATAGAATTTGGGAATATTATTTGTTTTTCGTTAGTCAAAAGGGTATCCCGATTGAAACCTCACTTAGGGTTTATCGTAGGTATTTGCAGTATGATCCGAATCATATTGAGGATTTTATTGAGTTTTTGATTAATTCCAGTCTTTGGCAAGAGTCTGCTGAGAGATTGGCCTCTGTTTTGAATGATGATAAATTTTATTCGATTAAGGGGAAGACGAAACATAGGCTTTGGTTGGAGTTGTGTGATTTGCTGACTAGGCATGCAAATGAGGTGTCAGGGTTGAATGTGGATGCCATTATTAGGGGTGGGATTAGGAAGTTTTCGGATGAGGTTGGTCGGTTGTGGACTTCGCTTGCTGAGTATTATATTAGGAGGGGTTTGCATGAGAAGGCTAGAGATGTCTTTGAGGAGGGTATGTCGACTGTTATTACTGTGAGGGATTTTAGTGTTATATTTGATTCGTACTTGCAATTTGAAGAGAGTATGCTTGCTTTTAAGATGGAGGATATGGATATGAGTGACGAAGAAGATGAAGAAAATGAAGATGGGATGAAGGAGAAGGAAGATGAGGAGGAGGATGTAGATGTTCGTTTCAAATTCGATGTGGATGTTGACAAGAAGGAATTTGTGAAGGAATTTAAGAAGACGGTTTTATCTGGGTTTTGGCTGAATGACAAGAATGACATTGACTTGAGATTGGCCCGGTTTGACTACCTAATGGAGAGGAGGCCTGAATTGGCTAATAGTGTGCTTTTGCGTCAAAACCCACATAATGTTGAACAGTGGCACCGGAGGGTGAAGCTTTTTGAGGGTAATCCGACTAAGCAGATTCTCACTTACACGGAGGCTGTGAGGACTGTTGATCCCATGAAGGCAGTGGGAAGACCTCATACGCTATGGGTGGCTTTTGCAAAGCTTTACGAGGAGCACAACGATCTTGCCAATGCTCGAGTTATTTTTGACAAGGCAGTGCAGGTGAACTACAAAACTGTGGACAATCTGGCTAGTGTTTGGTGTGAGTGGGCTGAAATAGAGTTGAAACATGAGAATTTCAAAGGAGCACTTGACCTAATGAGGCGCGCTACAGCAGAGCCATCAGTTGAGGTCAAACGAAAAGGTAATCTTAGTTCAACATGTTCCCATTTTATTTTTCACAATATGCTCTATTTTTTTTTTTTTTGGTGTGTTTGTTGAATGGAGTTAACTGTTGAATTTATATTCTGCGTTACTTTTAGTGGCTGCTGATGGGAATCAACCAGTTCAGATGAAGCTGCATAAATCTTTGAGATTGTGGACCTTTTATGTTGATTTGGAGGAAAGTCTAGGTAGTTTGGAGTCTACTCGGGAAGTTTATGAACGGATTTTGGATTTACGAATAGCCACACCACAAATAATAATCAATTATGCATACTTTCTGGAGGTATGGAGCAACACAATTTTTTAAGTACAATATCTCTTTTGGATTTTACTCTGATGGTTTTGGCTCATTGACATATTTTGTTAAATGATTTTGATTTATGTAGGAACACAAATACTTTGAAGATGCTTTTAAGGTTTATGAAAGGGGAGTCAAGATATTCAAGTACCCACATGTTAAAGATATTTGGGTTACATATCTGTCTAAATTTGTGAAGAGATATGGAAGGACAAAATTGGAGAGAGCAAGAGAGCTGTTTGAGAACGCAGTTGAAACGGTATGTGCTTTTATTTTTCTTCTGTTGCTCATCTCTAAGCGTTCTTGAAGTTACTGTTTCTTTTTAAATTTTACATCGATGATCTTAGAGCTGGTTACGTTTGAAGTGCGTTAAATATAACAAATCTTATTCCTGTGATATTTTCTATATGACCCATCATCAATTTTCTGCTTTTCATTGTAATTATAATATTTTGTATGGTTTGTAGTGTGCACTACTAAAGTTGATGAACCTGAAAACTTTAGTTATTTTAACATAAAGCATTGGATTAGATTGAATGAATTGATGTGGATTACATAGAGAAGTTGATGTAAGTTAATGCTGATACAGTGTCTTCTTTACTCTCCGGTTCATACAATTCAACATAATATTTTAAACGTGTTAAGCAGCATTTAGACAGTGAATATGGATGCTATCATTTTTCCTTCAACTATTCTTTGTAATTTCAATCTCACATCCGATTTCTTATGTTAGAGCTTGAATTCTTGTGATACACATCACAACCGAGGCGAGCTCTAATCTTGATGAGTCACCATTTTGCATCACAAGCTCATTTTCCTTGGCCTTTGCATTCTGTTAGAGTAATTCCATTTTGACAGACTTCGCCATTTTACATTCATTTATAGATTCTCAATTCTGTTATAGGAAATTGACTCTAAAAGGACGAACACTGTCTCCTTTCTCACTATTCTATATGGAAATTGACTCTTGATTTCATCTTCACTACCCACATTAAATGATATAAAATCACCAAATTCAAAACTAGACAAAGCCTTGCCATTTTCAGCTGCTCTATCATCAGAACTTGATAGCTCATAAACTAACAATCGCTGCTTTTCATCAGAACCTCCCATTTGATGTCTCAAATTTTCATTGTAAAACCTCAATGGATGGTGAGTTCTCATATGGTTTCCAAAAAAATCAATTTCTAAATCCTGCATATATCTTTGTGCTGCTGGTCTAAGGCATTATATTGATTTAATTATTTATGTTGACTAAGATCATGTTAAGGTATTATTAAAGGCAGTGAATTGTATTATGTAGAATTTATTGAATTGGTTTGAGAGTTAAGGGGTCTCTTTGTTCATTTCATTGTCTGTGGCATAGACATTAGACTTGATGAAATCTGGAAATAGTTATGCTTATCGTAAGCTAGAAGTCTCAAGTGTCGATATACACCAGATTTCCATTAATATATTCACCTCATGATTATTTTCTTCATTTCAGTATATATTCTTTATCACAGTAAGCAGGTTTTCTCACCATACTTCTTCTATCTGTATATACATATGTGGGTGTGTAAAAAATTAGCAAAGTATGTGCTGGTCATGCCAAAACTAAGTATAAATAACACAAGGATAGAAAGTAATAACATATATCATAACTCATCAAAACTAGTACTACTTTCTCCTGCATTTGTTATCACCAAAATATAGGGTATAAAAACAGCATCTCTGTAAGGGTTTTGATCAAGATAATTTAATAACAAAATTGAGTTTTAAGAAGCAGATGATGGTGGTTGTTGATTATTCCTTAGGACTTGTAATGATCTATGCCCACTTGGCATATGATCTATAAGATTAGGTAATGGAGGCTTTTATAAAGCCAAAGCTGGGTAATTGAATATATGCATAGAAACATATTGAACCAGGTTTCATCTTCTTTTTATTTGTTCTTCTGGAGTTGCTATTACTTGAAAATAGCCTTTCTCCTTCATAGTCATATGATCATATCATAATGTTTGAGCTTGAATTCTAGCTCTAGAGAATGTTTCTCTGGTATGTTGGTATATGAATATGATGTTGAAACAATAGCAATTCGTATGATGCCTGAAATTATAGTTTCTCTTTTCTTATTTCATTCTTCATTTCACTAGATATATTGGTTAGAGTTAAAAGAAGCAAGCTTAAGAATTTCTTGGGGGTTAAAGCCATAGAGGGTTGATTGATCCCTTTGGAAGTCATAGTTCTAAGCAATATGTGATTGTGGAATCTCAATTCACTGTCTCTCCCCCCACGTAACATATCAATTTTTTTAAATGAGTTCTGTCTGCATTATTTTTTTCTATTAGCCAAACCTTTTCCCTCAAAAGATCTTGTCATAGAATAACTACGTGATATGTTTGATGTCTTAGCCAAGATAAAGAATTGTTCTTTGATGGGTTTTTATTTATTTGTTTATTCAAAGCTTGCCACTTGCATATTAAATACACAACTTATTCGGATGTTTGCAATCAGGTTTAGAAGCTTTGCTTGCAGTTCTGTTATTTTCAGAAGTATCCGTAGAGTTTGGTTCAATTCAGCATTTATAAGTATTCCCGTTCTTTAGTTTTAGAAGCGGTTCAGTTCCTTTAATTTTAGAAACAGTTCAATTTAGGAATATAAGATCCCATTATAGTGAGAACCAAAAGACATCACTTTGGTTTTCCTATCCGAACAGAACCATGAACAACACTTACATTGACTGTGGAACAACTTGTCTCTGTCATTGGCTATAGTAGTGGAAAACCAACATTGTCCTCTTTTGCTTTTGGTAATCCTAGAGTGTAATGTAAAATATATCATAACAGTCTTAGCATGATTATACAGCAAGTCAGAGACTTCAAAGTCTGAAATAGTAGCACTTCACACTGCTATGTTTGCAAAGCAATAAGTGCCGCACCTATTTTTGTTGTCAAAATGAAGTATTGTAGTATGACAGTAATGAAAATATTAGGAAAGATTTAGAGTTTAATGAGTTGGATCCCAATATAGATTATGATATAACATTATGGTATAATTTGATCTGTGTAGCCGACCCCACTTAGTGGGATAAGCCTTGGTCGTTGTTGTAGTATGACTATATTTGCTATTTGTGAACTAAAGTGACTTAGTCAAGTGATTGTACTGTACTGAACTTTTAATGTAATCAATAAGCATCTAGTTTGTCAAAGATCATAACTAGTATTTTCCTTGGTTCATTGTAGTATGTGATGACATTCAACTGTTTGATAATGTGTTTGTTTGTATCTTGTAACACTTGAATTTTATTGTTGATAACGTATTATAATGCTAACACAATTTGCTTTTTGGATAATGCTTGCCAAAACAGGCCCCAGCTGATCAAGTGAAACCTCTCTATCTGCAATATGCTAAGCTGGAAGAGGACTATGGACTAGCAAAGCGAGCTATGAAGGTTTACGATCAAGCAACGAAAGCTGTTCCAAACAATGAAAAGTTAAGCATGTATGAAATATACATTGCTCGTGCTGCTGAGATATTTGGGGTACCCAAGACACGCGAGATCTATGAGCAGGCAATTGAATCTGGTCTTCCAGATAAGGATGTCAAAACTATGTGTTTGAAGTATGCTGAACTGGAAAGAAGCTTGGGAGAAATTGAACGTGCCCGTGGAGTATATGTATTTGCCTCCAAGTTTGCTGATCCGCGGTCTGATCCAGACTTTTGGAATGATTGGCATGAATTTGAGGTTCAACATGGAAATGAGGACACCTTTAGAGAAATGCTTCGAATTAAAAGGAGTGTCTCTGCAAGCTACAGCCAGGTTACTATAATGTTTCGATTTTCACTTCCTGAGCCTTATCATTGATTCGTTTGCATTTATTCTAATCTTAGTTTTATTATTTTACAGACACATTTTATACTGCCCGAGTATCTGATGCAGAAGGACCAAACAGTGAATCTTGAGGAGGCCAAAGACAAGTTAAAGGAGGCTGGGATCCCTGAGGACGAAATGGCTGCTTTGGAAAGGCAATTAGCCCCAGCAGTTGACAAAGCAGCGACAAAAGAGAGAAAAGTTGGGTTTGTAAGTGCTGGAGTGGAATCACAGTCCGATGGAGGGATAAAAACTAATGCGAACCATGAAGAAATTGAGTTACCAGAAGAAAATGATTCTGATGACGATGATATTGAGATTGCACAAAAAGATGTCCCTTCTGCTGTTTTTGGCGGTTTGGTTAGAAAAAGAGACGAGATTGAAAATAATGAAGTAGATGATGGTGCAAAAGAGAAGGATAATGAAAGTCGGCTTGGTGCCCTTGAGAGAATTAAGAAGCTGAAACGAAATTAA
Protein sequence

>MS.gene047509.t1

MAAISSDLYPSEDDLVYEEELLRNPFSLKLWWRYLIARSDSPFKKRFIIYERALKALPGSYKLWHAYLRERLEIVRSLPITHSQFETLNNTFERALVTMHKMPRVWIMYLQTLTQQKLVTRTRRTFDRALCALPVTQHDRIWEYYLFFVSQKGIPIETSLRVYRRYLQYDPNHIEDFIEFLINSSLWQESAERLASVLNDDKFYSIKGKTKHRLWLELCDLLTRHANEVSGLNVDAIIRGGIRKFSDEVGRLWTSLAEYYIRRGLHEKARDVFEEGMSTVITVRDFSVIFDSYLQFEESMLAFKMEDMDMSDEEDEENEDGMKEKEDEEEDVDVRFKFDVDVDKKEFVKEFKKTVLSGFWLNDKNDIDLRLARFDYLMERRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTVDPMKAVGRPHTLWVAFAKLYEEHNDLANARVIFDKAVQVNYKTVDNLASVWCEWAEIELKHENFKGALDLMRRATAEPSVEVKRKVAADGNQPVQMKLHKSLRLWTFYVDLEESLGSLESTREVYERILDLRIATPQIIINYAYFLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGRTKLERARELFENAVETAPADQVKPLYLQYAKLEEDYGLAKRAMKVYDQATKAVPNNEKLSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKTMCLKYAELERSLGEIERARGVYVFASKFADPRSDPDFWNDWHEFEVQHGNEDTFREMLRIKRSVSASYSQTHFILPEYLMQKDQTVNLEEAKDKLKEAGIPEDEMAALERQLAPAVDKAATKERKVGFVSAGVESQSDGGIKTNANHEEIELPEENDSDDDDIEIAQKDVPSAVFGGLVRKRDEIENNEVDDGAKEKDNESRLGALERIKKLKRN