AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene020088

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene020088.t1 MTR_8g012400 97.840 463 10 0 1 463 1 463 0.0 941
MS.gene020088.t1 MTR_8g012400 97.911 383 8 0 81 463 1 383 0.0 786
MS.gene020088.t1 MTR_7g053500 72.893 439 116 1 28 463 25 463 0.0 691
MS.gene020088.t1 MTR_7g053500 72.798 386 102 1 81 463 1 386 0.0 611
MS.gene020088.t1 MTR_4g088155 54.525 453 199 3 17 463 11 462 0.0 537
MS.gene020088.t1 MTR_5g085580 40.045 447 246 7 30 459 26 467 9.78e-117 350
MS.gene020088.t1 MTR_1g056640 38.950 457 248 5 30 459 39 491 2.86e-116 350
MS.gene020088.t1 MTR_6g088885 39.046 461 268 9 4 458 1 454 1.72e-112 341
MS.gene020088.t1 MTR_4g069940 37.281 456 276 7 10 459 9 460 1.07e-101 312
MS.gene020088.t1 MTR_3g065460 37.037 459 271 8 6 459 1 446 8.36e-99 305
MS.gene020088.t1 MTR_3g116510 38.106 454 268 8 11 458 8 454 3.51e-97 300
MS.gene020088.t1 MTR_5g078200 37.691 459 267 8 6 459 1 445 5.94e-96 302
MS.gene020088.t1 MTR_1g031900 35.948 459 276 7 3 458 2 445 3.28e-94 293
MS.gene020088.t1 MTR_1g031900 35.948 459 276 7 3 458 2 445 4.93e-94 293
MS.gene020088.t1 MTR_1g022160 36.703 455 257 9 30 458 25 474 2.27e-93 291
MS.gene020088.t1 MTR_5g078200 38.298 423 247 6 40 459 1 412 2.35e-93 295
MS.gene020088.t1 MTR_4g010200 40.227 353 204 5 9 358 11 359 6.28e-92 284
MS.gene020088.t1 MTR_3g083580 34.879 453 274 8 14 458 7 446 6.71e-92 288
MS.gene020088.t1 MTR_4g132280 36.721 433 260 6 30 459 46 467 1.61e-91 287
MS.gene020088.t1 MTR_1g022160 36.264 455 259 9 30 458 25 474 3.20e-91 285
MS.gene020088.t1 MTR_8g102340 35.153 458 254 9 4 458 1 418 4.88e-91 285
MS.gene020088.t1 MTR_1g022160 36.161 448 255 9 30 451 25 467 2.63e-89 280
MS.gene020088.t1 MTR_8g085720 33.983 462 289 8 1 459 1 449 4.67e-89 280
MS.gene020088.t1 MTR_3g080410 41.420 338 192 5 30 366 27 359 1.80e-87 272
MS.gene020088.t1 MTR_4g083500 34.298 449 269 8 30 459 45 486 9.78e-86 273
MS.gene020088.t1 MTR_7g026340 36.322 435 259 11 30 457 24 447 7.68e-84 265
MS.gene020088.t1 MTR_1g077990 42.593 324 179 5 30 352 32 349 1.06e-83 263
MS.gene020088.t1 MTR_1g007810 44.860 321 167 6 30 348 17 329 1.15e-82 259
MS.gene020088.t1 MTR_4g084480 38.636 352 207 6 3 353 2 345 2.60e-82 259
MS.gene020088.t1 MTR_4g084480 38.636 352 207 6 3 353 9 352 3.61e-82 259
MS.gene020088.t1 MTR_4g084480 38.636 352 207 6 3 353 9 352 4.33e-82 259
MS.gene020088.t1 MTR_4g052970 37.690 329 199 5 30 357 30 353 2.23e-79 251
MS.gene020088.t1 MTR_2g086530 38.095 357 209 8 8 362 10 356 3.72e-77 246
MS.gene020088.t1 MTR_2g086530 38.024 334 199 6 30 362 9 335 1.50e-76 244
MS.gene020088.t1 MTR_2g019345 37.644 348 208 5 4 351 3 341 9.07e-75 240
MS.gene020088.t1 MTR_4g114850 36.615 325 201 4 30 353 27 347 1.23e-72 234
MS.gene020088.t1 MTR_4g114850 36.615 325 201 4 30 353 27 347 1.60e-72 233
MS.gene020088.t1 MTR_4g114850 36.615 325 201 4 30 353 27 347 3.02e-72 233
MS.gene020088.t1 MTR_1g022160 39.077 325 192 5 30 352 25 345 6.46e-72 233
MS.gene020088.t1 MTR_1g010120 33.621 464 274 17 12 462 10 452 6.41e-68 224
MS.gene020088.t1 MTR_2g034470 36.202 337 201 8 26 360 27 351 1.91e-67 220
MS.gene020088.t1 MTR_3g116510 39.450 327 187 7 136 458 1 320 4.32e-67 218
MS.gene020088.t1 MTR_1g053320 32.829 463 284 16 7 459 12 457 7.89e-67 222
MS.gene020088.t1 MTR_8g092070 34.932 438 263 15 30 459 35 458 2.79e-66 223
MS.gene020088.t1 MTR_7g081350 34.870 347 212 7 1 347 1 333 6.37e-66 215
MS.gene020088.t1 MTR_2g034440 36.196 326 194 8 19 342 12 325 8.85e-66 215
MS.gene020088.t1 MTR_2g034480 35.920 348 205 11 11 354 9 342 1.56e-64 212
MS.gene020088.t1 MTR_3g095050 31.602 462 294 15 5 459 10 456 2.41e-64 216
MS.gene020088.t1 MTR_3g108600 32.613 463 269 15 7 462 13 439 3.01e-64 215
MS.gene020088.t1 MTR_4g124440 34.312 443 263 17 31 462 30 455 4.63e-64 215
MS.gene020088.t1 MTR_1g052430 35.826 321 194 6 30 349 33 342 9.80e-64 212
MS.gene020088.t1 MTR_2g034470 35.168 327 198 8 36 360 2 316 1.64e-63 209
MS.gene020088.t1 MTR_2g027560 33.181 437 269 15 30 458 29 450 1.70e-61 208
MS.gene020088.t1 MTR_4g076255 36.308 325 186 9 30 352 26 331 7.94e-61 202
MS.gene020088.t1 MTR_4g076470 34.203 345 205 10 6 348 1 325 1.02e-60 201
MS.gene020088.t1 MTR_7g081370 34.006 347 203 7 1 347 1 321 1.63e-60 201
MS.gene020088.t1 MTR_4g112025 30.621 467 296 18 6 462 12 460 2.73e-60 206
MS.gene020088.t1 MTR_4g076570 34.579 321 198 6 30 349 23 332 3.22e-58 196
MS.gene020088.t1 MTR_4g076430 34.473 351 204 12 6 352 1 329 2.41e-57 192
MS.gene020088.t1 MTR_4g076440 32.857 350 211 10 6 352 1 329 3.43e-56 189
MS.gene020088.t1 MTR_4g076490 32.923 325 200 7 30 353 98 405 5.06e-56 192
MS.gene020088.t1 MTR_4g076500 33.333 318 196 7 30 345 79 382 8.04e-53 182
MS.gene020088.t1 MTR_3g031770 30.201 447 281 17 23 459 21 446 6.77e-52 182
MS.gene020088.t1 MTR_6g032820 29.647 425 273 15 30 442 27 437 1.59e-48 172
MS.gene020088.t1 MTR_7g085390 29.252 441 283 17 30 458 27 450 5.24e-48 172
MS.gene020088.t1 MTR_5g081720 34.314 306 189 8 50 352 58 354 5.08e-47 167
MS.gene020088.t1 MTR_4g134280 32.479 351 213 15 116 458 2 336 1.90e-41 152
MS.gene020088.t1 MTR_8g063490 44.444 108 46 2 298 402 1 97 3.19e-23 94.4
MS.gene020088.t1 MTR_8g085440 47.778 90 46 1 370 459 28 116 7.51e-21 88.2
MS.gene020088.t1 MTR_1g116870 47.059 85 44 1 374 458 276 359 1.19e-20 93.6
MS.gene020088.t1 MTR_5g015720 44.318 88 48 1 372 458 327 414 2.16e-20 93.6
MS.gene020088.t1 MTR_5g097420 38.542 96 59 0 363 458 19 114 6.19e-20 85.5
MS.gene020088.t1 MTR_8g089400 38.000 100 58 1 363 458 22 121 9.14e-19 83.6
MS.gene020088.t1 MTR_8g471000 45.122 82 45 0 132 213 2 83 1.85e-18 80.5
MS.gene020088.t1 MTR_8g089400 38.000 100 58 1 363 458 42 141 2.57e-18 82.8
MS.gene020088.t1 MTR_8g085390 45.455 88 47 1 373 460 29 115 8.09e-18 81.6
MS.gene020088.t1 MTR_4g133735 38.824 85 52 0 374 458 28 112 1.24e-17 79.0
MS.gene020088.t1 MTR_8g085420 45.455 88 47 1 370 457 28 114 2.29e-17 79.0
MS.gene020088.t1 MTR_5g091650 39.560 91 54 1 371 461 105 194 5.49e-17 79.7
MS.gene020088.t1 MTR_4g133730 37.647 85 53 0 374 458 28 112 5.60e-17 77.0
MS.gene020088.t1 MTR_5g091650 39.560 91 54 1 370 460 104 193 8.09e-17 80.9
MS.gene020088.t1 MTR_3g082080 44.304 79 43 1 374 452 157 234 2.59e-15 75.9
MS.gene020088.t1 MTR_4g036680 33.019 106 64 2 244 349 77 175 2.67e-15 75.5
MS.gene020088.t1 MTR_4g036775 33.019 106 64 2 244 349 77 175 3.33e-15 75.1
MS.gene020088.t1 MTR_3g048280 39.773 88 52 1 371 458 109 195 9.53e-15 73.6
MS.gene020088.t1 MTR_4g079530 38.889 90 55 0 370 459 33 122 1.06e-14 71.2
MS.gene020088.t1 MTR_4g079530 38.462 91 56 0 370 460 33 123 1.64e-14 72.0
MS.gene020088.t1 MTR_8g085400 41.975 81 43 2 372 452 31 107 5.41e-14 68.6
MS.gene020088.t1 MTR_2g072500 34.483 87 55 1 372 458 6 90 1.71e-13 66.6
MS.gene020088.t1 MTR_2g049670 40.000 85 49 2 374 458 158 240 2.16e-13 71.6
MS.gene020088.t1 MTR_1g084820 37.647 85 51 2 370 454 416 498 4.03e-13 72.0
MS.gene020088.t1 MTR_1g084820 37.647 85 51 2 370 454 416 498 4.20e-13 71.6
MS.gene020088.t1 MTR_8g088120 38.961 77 46 1 382 458 56 131 1.30e-12 67.4
MS.gene020088.t1 MTR_7g111600 36.047 86 54 1 374 459 160 244 1.54e-12 67.8
MS.gene020088.t1 MTR_7g111600 36.047 86 54 1 374 459 160 244 1.69e-12 68.6
MS.gene020088.t1 MTR_7g111600 36.047 86 54 1 374 459 160 244 2.01e-12 68.2
MS.gene020088.t1 MTR_5g044530 34.409 93 58 2 370 460 18 109 4.46e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene020088.t1 AT3G07320 63.087 447 164 1 18 463 14 460 0.0 610
MS.gene020088.t1 AT3G23770 54.157 445 197 3 25 463 33 476 0.0 516
MS.gene020088.t1 AT4G14080 52.596 443 206 2 24 463 37 478 1.56e-180 513
MS.gene020088.t1 AT5G55180 40.826 436 246 7 30 459 28 457 1.16e-118 355
MS.gene020088.t1 AT4G26830 40.305 459 262 8 6 459 1 452 2.21e-118 354
MS.gene020088.t1 AT4G26830 40.639 438 249 7 26 459 26 456 2.11e-117 352
MS.gene020088.t1 AT2G05790 39.732 448 248 6 30 459 26 469 1.85e-116 350
MS.gene020088.t1 AT5G55180 40.793 429 242 7 30 452 28 450 1.65e-114 345
MS.gene020088.t1 AT5G56590 39.907 431 253 5 30 458 27 453 3.68e-112 340
MS.gene020088.t1 AT4G29360 36.076 474 274 7 9 458 7 475 1.58e-99 308
MS.gene020088.t1 AT4G29360 35.744 484 272 8 9 458 7 485 2.48e-98 306
MS.gene020088.t1 AT4G34480 38.865 458 268 7 3 459 2 448 3.93e-98 304
MS.gene020088.t1 AT5G24318 35.320 453 279 8 11 458 12 455 4.48e-97 300
MS.gene020088.t1 AT2G01630 36.721 433 260 6 30 459 24 445 2.15e-95 297
MS.gene020088.t1 AT1G66250 37.037 432 257 8 30 458 33 452 1.17e-94 295
MS.gene020088.t1 AT3G13560 36.468 436 254 7 30 458 27 446 1.61e-94 295
MS.gene020088.t1 AT3G13560 36.468 436 254 7 30 458 27 446 1.61e-94 295
MS.gene020088.t1 AT3G13560 36.468 436 254 7 30 458 27 446 1.61e-94 295
MS.gene020088.t1 AT3G13560 36.468 436 254 7 30 458 27 446 1.61e-94 295
MS.gene020088.t1 AT3G13560 36.468 436 254 7 30 458 27 446 1.61e-94 295
MS.gene020088.t1 AT2G16230 37.355 431 263 6 30 459 26 450 6.03e-93 290
MS.gene020088.t1 AT2G01630 36.620 426 256 6 30 452 24 438 6.75e-93 288
MS.gene020088.t1 AT5G24318 34.899 447 277 8 11 452 12 449 1.67e-92 288
MS.gene020088.t1 AT1G11820 34.873 433 268 6 30 459 45 466 2.06e-90 284
MS.gene020088.t1 AT3G15800 41.718 326 184 5 30 353 44 365 1.22e-86 271
MS.gene020088.t1 AT3G55430 35.347 447 273 10 15 458 16 449 2.57e-86 271
MS.gene020088.t1 AT1G11820 34.507 426 265 6 30 452 45 459 2.60e-86 273
MS.gene020088.t1 AT4G18340 37.536 349 211 6 5 352 11 353 1.53e-79 252
MS.gene020088.t1 AT2G27500 39.024 328 195 4 30 356 30 353 3.86e-79 251
MS.gene020088.t1 AT1G32860 40.498 321 187 4 30 349 30 347 4.08e-79 252
MS.gene020088.t1 AT4G18340 37.536 349 211 6 5 352 11 353 4.45e-79 251
MS.gene020088.t1 AT2G27500 39.024 328 195 4 30 356 30 353 9.17e-79 250
MS.gene020088.t1 AT5G42720 38.889 378 210 8 1 366 1 369 1.57e-78 251
MS.gene020088.t1 AT5G24318 37.318 343 205 6 11 351 12 346 3.38e-76 243
MS.gene020088.t1 AT4G34480 39.503 362 208 6 3 361 2 355 1.62e-75 241
MS.gene020088.t1 AT1G30080 38.571 350 206 6 4 349 8 352 2.13e-75 241
MS.gene020088.t1 AT1G30080 38.571 350 206 6 4 349 8 352 4.26e-75 241
MS.gene020088.t1 AT2G39640 34.423 459 275 14 5 459 7 443 3.14e-73 241
MS.gene020088.t1 AT2G26600 37.237 333 201 5 30 358 35 363 7.28e-73 235
MS.gene020088.t1 AT2G01630 36.119 371 223 6 30 397 24 383 3.04e-72 233
MS.gene020088.t1 AT3G57270 39.169 337 189 8 18 351 16 339 4.81e-72 231
MS.gene020088.t1 AT5G42100 37.846 325 195 6 30 351 28 348 3.33e-70 229
MS.gene020088.t1 AT5G42100 37.846 325 195 6 30 351 28 348 4.39e-70 229
MS.gene020088.t1 AT3G61810 36.890 328 191 4 30 352 56 372 4.62e-70 227
MS.gene020088.t1 AT4G34480 38.953 344 200 6 117 459 3 337 3.16e-68 223
MS.gene020088.t1 AT5G24318 35.185 324 198 6 139 458 1 316 1.09e-66 217
MS.gene020088.t1 AT3G46570 35.838 346 208 8 9 351 10 344 2.02e-64 212
MS.gene020088.t1 AT4G16260 35.057 348 212 8 6 352 1 335 6.34e-64 210
MS.gene020088.t1 AT4G31140 31.780 472 285 18 8 462 1 452 7.11e-64 214
MS.gene020088.t1 AT3G24330 32.120 467 290 17 7 462 18 468 7.18e-64 214
MS.gene020088.t1 AT1G11820 35.474 327 204 5 30 353 45 367 6.12e-62 206
MS.gene020088.t1 AT2G27500 38.489 278 166 4 80 356 2 275 1.98e-61 203
MS.gene020088.t1 AT4G17180 33.691 466 265 18 7 458 5 440 2.28e-61 207
MS.gene020088.t1 AT5G20340 36.943 314 185 8 30 342 44 345 4.83e-61 203
MS.gene020088.t1 AT3G57260 33.429 347 211 8 6 352 13 339 3.00e-60 201
MS.gene020088.t1 AT4G16260 35.220 318 192 8 36 352 2 306 4.38e-60 199
MS.gene020088.t1 AT3G57260 33.429 347 211 8 6 352 29 355 5.92e-60 200
MS.gene020088.t1 AT5G20870 32.623 469 280 20 9 459 10 460 9.56e-59 201
MS.gene020088.t1 AT5G20390 35.905 337 200 9 6 341 13 334 1.05e-58 197
MS.gene020088.t1 AT1G77780 33.140 344 218 7 6 349 1 332 9.29e-58 195
MS.gene020088.t1 AT5G18220 30.886 463 287 18 11 459 13 456 2.79e-56 194
MS.gene020088.t1 AT5G20330 35.144 313 190 8 30 341 35 335 5.51e-56 189
MS.gene020088.t1 AT5G58090 31.222 442 280 15 30 462 23 449 1.74e-55 192
MS.gene020088.t1 AT2G26600 37.363 273 163 5 90 358 1 269 4.32e-55 186
MS.gene020088.t1 AT1G33220 35.762 302 176 8 30 327 35 322 1.13e-54 186
MS.gene020088.t1 AT3G04010 29.741 464 290 20 11 459 16 458 8.19e-52 182
MS.gene020088.t1 AT3G57240 33.639 327 198 9 27 352 33 341 9.93e-52 178
MS.gene020088.t1 AT5G64790 28.664 464 305 17 5 459 6 452 3.38e-50 178
MS.gene020088.t1 AT1G77790 30.595 353 225 9 2 349 4 341 3.19e-49 172
MS.gene020088.t1 AT5G20560 32.353 340 212 9 9 341 8 336 3.95e-49 171
MS.gene020088.t1 AT3G55780 33.876 307 187 9 58 357 64 361 1.23e-47 168
MS.gene020088.t1 AT2G19440 29.630 459 297 19 11 459 3 445 2.41e-45 164
MS.gene020088.t1 AT2G19440 29.630 459 297 19 11 459 3 445 2.41e-45 164
MS.gene020088.t1 AT5G58480 28.409 440 282 15 30 458 27 444 7.01e-45 163
MS.gene020088.t1 AT1G64760 29.387 473 289 21 4 459 5 449 7.43e-45 163
MS.gene020088.t1 AT1G64760 29.387 473 289 21 4 459 5 449 7.43e-45 163
MS.gene020088.t1 AT5G67460 40.594 101 56 1 362 458 277 377 8.26e-21 94.4
MS.gene020088.t1 AT5G35740 37.113 97 60 1 363 458 19 115 2.28e-19 84.0
MS.gene020088.t1 AT2G30933 43.333 90 50 1 372 461 80 168 7.87e-19 85.9
MS.gene020088.t1 AT5G67460 41.053 95 52 1 362 452 277 371 3.08e-18 86.7
MS.gene020088.t1 AT1G66870 37.634 93 58 0 366 458 45 137 3.40e-18 81.3
MS.gene020088.t1 AT4G13600 46.067 89 47 1 374 462 61 148 3.79e-18 84.0
MS.gene020088.t1 AT1G66852 38.947 95 53 2 366 458 18 109 4.03e-18 80.1
MS.gene020088.t1 AT1G66870 37.634 93 58 0 366 458 18 110 4.89e-18 80.1
MS.gene020088.t1 AT1G79480 37.647 85 52 1 374 458 311 394 9.16e-17 82.4
MS.gene020088.t1 AT1G79480 37.647 85 52 1 374 458 310 393 9.61e-17 82.4
MS.gene020088.t1 AT4G16165 38.710 93 57 0 366 458 18 110 1.73e-16 75.9
MS.gene020088.t1 AT2G04910 37.500 88 55 0 374 461 15 102 2.40e-16 75.1
MS.gene020088.t1 AT4G05430 35.922 103 66 0 356 458 5 107 3.11e-16 75.9
MS.gene020088.t1 AT4G05430 35.922 103 66 0 356 458 30 132 4.86e-16 76.3
MS.gene020088.t1 AT1G66855 35.227 88 57 0 371 458 23 110 5.85e-16 74.3
MS.gene020088.t1 AT2G30933 43.210 81 45 1 372 452 80 159 1.76e-15 74.3
MS.gene020088.t1 AT2G30933 43.210 81 45 1 372 452 80 159 1.76e-15 74.3
MS.gene020088.t1 AT5G61130 37.363 91 56 1 369 459 16 105 3.11e-15 74.7
MS.gene020088.t1 AT1G29380 41.176 85 49 1 374 458 148 231 3.74e-15 76.6
MS.gene020088.t1 AT1G29380 41.176 85 49 1 374 458 148 231 4.35e-15 75.5
MS.gene020088.t1 AT1G18650 41.860 86 49 1 374 459 21 105 6.21e-15 73.6
MS.gene020088.t1 AT2G04910 37.975 79 49 0 374 452 15 93 1.58e-14 70.5
MS.gene020088.t1 AT1G18650 41.860 86 49 1 374 459 21 105 2.08e-14 70.5
MS.gene020088.t1 AT5G63240 30.435 115 77 2 346 458 13 126 5.87e-14 68.9
MS.gene020088.t1 AT3G58100 36.782 87 55 0 374 460 41 127 8.35e-14 70.1
MS.gene020088.t1 AT1G09460 40.449 89 50 2 370 458 133 218 9.65e-14 72.4
MS.gene020088.t1 AT3G58100 36.782 87 55 0 374 460 117 203 1.29e-13 71.2
MS.gene020088.t1 AT4G05430 34.021 97 64 0 356 452 30 126 1.34e-13 68.2
MS.gene020088.t1 AT5G63225 34.483 87 56 1 372 458 23 108 2.78e-13 66.6
MS.gene020088.t1 AT4G09462 35.632 87 55 1 372 458 27 112 3.42e-13 66.2
MS.gene020088.t1 AT5G63250 32.673 101 65 2 358 456 27 126 3.91e-13 66.6
MS.gene020088.t1 AT1G29380 40.506 79 46 1 374 452 148 225 5.94e-13 68.6
MS.gene020088.t1 AT1G29380 40.506 79 46 1 374 452 148 225 5.94e-13 68.6
MS.gene020088.t1 AT4G09465 34.483 87 56 1 372 458 29 114 8.89e-13 65.5
MS.gene020088.t1 AT4G09467 34.483 87 56 1 372 458 29 114 1.05e-12 65.1
MS.gene020088.t1 AT4G09464 34.483 87 56 1 372 458 29 114 1.05e-12 65.1
MS.gene020088.t1 AT5G08000 37.079 89 55 1 371 459 37 124 2.10e-12 66.6
MS.gene020088.t1 AT2G43670 35.870 92 55 3 368 458 29 117 6.18e-12 63.2
MS.gene020088.t1 AT1G69295 36.782 87 53 2 369 455 16 100 2.31e-11 63.9
MS.gene020088.t1 AT2G29735 35.165 91 56 2 370 458 27 116 2.32e-11 61.2
MS.gene020088.t1 AT5G08000 36.782 87 54 1 373 459 20 105 2.89e-11 63.2
MS.gene020088.t1 AT4G09466 32.184 87 58 1 372 458 29 114 4.37e-11 60.5

Find 118 sgRNAs with CRISPR-Local

Find 205 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACATCACGGTTACGGATTC+TGG 0.230455 8.3:+77292161 MS.gene020088:CDS
GCTATGCGTTTAGTTCTTAC+TGG 0.231015 8.3:+77292744 MS.gene020088:CDS
ATTTACGAGATTGACCTTTC+TGG 0.245495 8.3:+77292518 MS.gene020088:CDS
TAATAGAAACTTCGTGAAAA+AGG 0.302686 8.3:+77292352 MS.gene020088:CDS
CTTACTTGATATAGTGAATA+AGG 0.302923 8.3:-77290606 None:intergenic
TACTAATTTGTTTGATCAAA+TGG 0.305685 8.3:+77292199 MS.gene020088:CDS
GTTCTTACTGGGCTCAGTTT+AGG 0.306807 8.3:+77292756 MS.gene020088:CDS
TTCGAACCTGATTCAGTTGT+TGG 0.322029 8.3:+77292713 MS.gene020088:CDS
TGAGAACTTGAAAACGGGTT+TGG 0.330345 8.3:+77292451 MS.gene020088:CDS
TACATTTGTTACAAGTTCAT+TGG 0.331273 8.3:-77291730 None:intergenic
CGTAAATACTCGACCCATTT+GGG 0.335947 8.3:-77292502 None:intergenic
TACGGATTCTGGTACGGGTT+TGG 0.336905 8.3:+77292172 MS.gene020088:CDS
CCGCCACCAGATGATTATAA+AGG 0.339804 8.3:+77292572 MS.gene020088:CDS
CCCATTGATTTGCAAGTGTT+TGG 0.339997 8.3:-77291761 None:intergenic
GCACAACCAGGAGTGAATTA+TGG 0.344738 8.3:+77291561 MS.gene020088:CDS
CTCATTCGTTATCTTCTTGT+TGG 0.349321 8.3:+77291819 MS.gene020088:CDS
ATCCGTAACCGTGATGTTAT+CGG 0.358110 8.3:-77292156 None:intergenic
CTTCATCAAAGAATCACATT+TGG 0.364686 8.3:-77293048 None:intergenic
AACTGAATCAGGTTCGAAAC+AGG 0.376600 8.3:-77292708 None:intergenic
TAATCCAAGTTAATATTAAT+AGG 0.377635 8.3:-77292119 None:intergenic
GAGAACTTGAAAACGGGTTT+GGG 0.377689 8.3:+77292452 MS.gene020088:CDS
AATGGAGCGGCTTGGGTATC+CGG 0.378158 8.3:+77292241 MS.gene020088:CDS
GTACAATGTGGGGCCATGTT+TGG 0.383285 8.3:-77291869 None:intergenic
GCCTTCCCTTTATAATCATC+TGG 0.397540 8.3:-77292578 None:intergenic
TTCGGGTTATTGTACCCAAA+TGG 0.398442 8.3:+77292488 MS.gene020088:CDS
GGTTGGGACACCGGCTCGAC+CGG 0.406933 8.3:+77292391 MS.gene020088:CDS
TCGTAAATACTCGACCCATT+TGG 0.407207 8.3:-77292503 None:intergenic
TTCATCAAAGAATCACATTT+GGG 0.408172 8.3:-77293047 None:intergenic
GGCGTGGTGTGTGGTGGCAG+AGG 0.410468 8.3:+77292598 MS.gene020088:CDS
GTCCGATAACATCACGGTTA+CGG 0.414241 8.3:+77292154 MS.gene020088:CDS
ACCAAACACTTGCAAATCAA+TGG 0.422374 8.3:+77291760 MS.gene020088:CDS
CCATGTTTGGTTTGTTGTTG+AGG 0.425009 8.3:-77291856 None:intergenic
CAGATATTTATCGCTGAAAC+CGG 0.425511 8.3:+77292269 MS.gene020088:CDS
TTTCTAAATGTGCCATTTGA+AGG 0.426130 8.3:-77291993 None:intergenic
AGTCAAAGTTGGAACACCTT+TGG 0.427478 8.3:+77291941 MS.gene020088:CDS
AGCTAACAAGACGGCGGTAG+TGG 0.430740 8.3:+77292622 MS.gene020088:CDS
AGAAAGGTACGAGGTTGGTT+TGG 0.432633 8.3:-77291785 None:intergenic
GTATAATGAGAACTTGAAAA+CGG 0.438817 8.3:+77292445 MS.gene020088:CDS
TTGGCCTAATGATGGTGATT+TGG 0.439274 8.3:+77292292 MS.gene020088:CDS
ATCACCATCATTAGGCCAAC+CGG 0.440869 8.3:-77292288 None:intergenic
GCGATAAATATCTGAATATC+CGG 0.441239 8.3:-77292260 None:intergenic
AGATCCTATTAATATTAACT+TGG 0.441837 8.3:+77292115 MS.gene020088:CDS
GCATGACCAACAACTGAATC+AGG 0.445045 8.3:-77292719 None:intergenic
TGGGTACGGAGCGTCACTTC+GGG 0.445726 8.3:+77292471 MS.gene020088:CDS
TCGAGGGCTTTGAGGATTTG+TGG 0.445943 8.3:-77291675 None:intergenic
TACAGAGAAAATATAAAAGA+TGG 0.450727 8.3:-77292425 None:intergenic
ATGAGTGATACTGAGGTTGT+TGG 0.450878 8.3:-77291609 None:intergenic
CGCCACCAGATGATTATAAA+GGG 0.453883 8.3:+77292573 MS.gene020088:CDS
TATAATGAGAACTTGAAAAC+GGG 0.456439 8.3:+77292446 MS.gene020088:CDS
GGGGAACCGAACATGTGAAT+TGG 0.459727 8.3:+77292670 MS.gene020088:CDS
GTTGAACCAATTCACATGTT+CGG 0.460183 8.3:-77292676 None:intergenic
ACATTTGTTACAAGTTCATT+GGG 0.460852 8.3:-77291729 None:intergenic
TGGTCCAAATCACCATCATT+AGG 0.461603 8.3:-77292296 None:intergenic
CTATGCGTTTAGTTCTTACT+GGG 0.467912 8.3:+77292745 MS.gene020088:CDS
TGGGAAGCATGATGGATACT+TGG 0.468241 8.3:-77291710 None:intergenic
GGTTTGCATAAAGTCAAAGT+TGG 0.468564 8.3:+77291930 MS.gene020088:CDS
ACATCATTTCCACCTTCAAA+TGG 0.475381 8.3:+77291981 MS.gene020088:CDS
CACGGTTACGGATTCTGGTA+CGG 0.477538 8.3:+77292166 MS.gene020088:CDS
TGAGTAGAAAGGTACGAGGT+TGG 0.478386 8.3:-77291790 None:intergenic
AAGTTCATTGGGAAGCATGA+TGG 0.480295 8.3:-77291718 None:intergenic
GGTCGAGCCGGTGTCCCAAC+CGG 0.480297 8.3:-77292389 None:intergenic
TAATCATCTGGTGGCGGCAA+TGG 0.481167 8.3:-77292566 None:intergenic
TCGGGTTATTGTACCCAAAT+GGG 0.481245 8.3:+77292489 MS.gene020088:CDS
ATTTGCAAGTGTTTGGTTTG+AGG 0.484955 8.3:-77291754 None:intergenic
AGTTGTCCATAATTCACTCC+TGG 0.489434 8.3:-77291567 None:intergenic
ACTTCGGCGTCTTTCCAGAA+AGG 0.492821 8.3:-77292532 None:intergenic
TTGGGTACGGAGCGTCACTT+CGG 0.498275 8.3:+77292470 MS.gene020088:CDS
TGGGCTCAGTTTAGGAGTGT+AGG 0.499642 8.3:+77292764 MS.gene020088:CDS
ACGGTTACGGATTCTGGTAC+GGG 0.501902 8.3:+77292167 MS.gene020088:CDS
TTGTCATATGCTTGCTCACA+GGG 0.505455 8.3:+77292650 MS.gene020088:CDS
AGTTGGAACACCTTTGGCAA+TGG 0.505469 8.3:+77291947 MS.gene020088:CDS
AAAACCTCCGGTTGGGACAC+CGG 0.507755 8.3:+77292382 MS.gene020088:CDS
CCAAACACTTGCAAATCAAT+GGG 0.509879 8.3:+77291761 MS.gene020088:CDS
GATACTGAGGTTGTTGGTGT+TGG 0.510745 8.3:-77291603 None:intergenic
GGTGGGACTTGCAACTTCAA+TGG 0.512252 8.3:+77292785 MS.gene020088:CDS
TGTGAATATTCGCACCAACT+TGG 0.523084 8.3:-77292316 None:intergenic
AGAATTGAACCCGGTCGAGC+CGG 0.529245 8.3:-77292401 None:intergenic
CTTGAAAACGGGTTTGGGTA+CGG 0.532871 8.3:+77292457 MS.gene020088:CDS
CTCAAAGCCCTCGAAAACAC+TGG 0.533455 8.3:+77291684 MS.gene020088:CDS
CTCAATGAAAGCAATAGCTA+TGG 0.542784 8.3:+77290556 None:intergenic
GGAGTGTTTCATTCTGTACA+TGG 0.546711 8.3:-77291895 None:intergenic
GCTCAGTTTAGGAGTGTAGG+TGG 0.550053 8.3:+77292767 MS.gene020088:CDS
TATTTATCGCTGAAACCGGT+TGG 0.550062 8.3:+77292273 MS.gene020088:CDS
GAAGTTTCTATTATATGTAC+CGG 0.550152 8.3:-77292342 None:intergenic
TGTTTCATTCTGTACATGGC+AGG 0.550842 8.3:-77291891 None:intergenic
CCTTTATAATCATCTGGTGG+CGG 0.551740 8.3:-77292572 None:intergenic
GTTGGGACACCGGCTCGACC+GGG 0.562167 8.3:+77292392 MS.gene020088:CDS
GCGTGGTGTGTGGTGGCAGA+GGG 0.564565 8.3:+77292599 MS.gene020088:CDS
GTTTGATCAAATGGTGGATG+CGG 0.578822 8.3:+77292208 MS.gene020088:CDS
CTAAATGTGCCATTTGAAGG+TGG 0.580832 8.3:-77291990 None:intergenic
CCTCAACAACAAACCAAACA+TGG 0.582013 8.3:+77291856 MS.gene020088:CDS
ATTGTCATATGCTTGCTCAC+AGG 0.586674 8.3:+77292649 MS.gene020088:CDS
TGTAAAACATCCATTGCCAA+AGG 0.589625 8.3:-77291957 None:intergenic
CTCAGTTTAGGAGTGTAGGT+GGG 0.590399 8.3:+77292768 MS.gene020088:CDS
ACCAGATGATTATAAAGGGA+AGG 0.595170 8.3:+77292577 MS.gene020088:CDS
TAAAGGGAAGGCGTGGTGTG+TGG 0.595905 8.3:+77292589 MS.gene020088:CDS
AATGGCTTAAGCTCTGACTT+CGG 0.599216 8.3:-77292548 None:intergenic
TTCCCTTTATAATCATCTGG+TGG 0.608747 8.3:-77292575 None:intergenic
GGTGCGAATATTCACAATGC+CGG 0.608814 8.3:+77292323 MS.gene020088:CDS
ACTGAATCAGGTTCGAAACA+GGG 0.609146 8.3:-77292707 None:intergenic
TGTACATGGCAGGTACAATG+TGG 0.609170 8.3:-77291881 None:intergenic
TAATTTGTTTGATCAAATGG+TGG 0.609839 8.3:+77292202 MS.gene020088:CDS
CGAGCCGGTGTCCCAACCGG+AGG 0.610594 8.3:-77292386 None:intergenic
AGGGAAGGCGTGGTGTGTGG+TGG 0.610621 8.3:+77292592 MS.gene020088:CDS
GCAGAAATCTCAGCACAACC+AGG 0.611520 8.3:+77291549 MS.gene020088:CDS
GGAGTGAATTATGGACAACT+AGG 0.612181 8.3:+77291570 MS.gene020088:CDS
TGGATCCTCTGCAATTTGAG+TGG 0.615021 8.3:-77292813 None:intergenic
GTACATGGCAGGTACAATGT+GGG 0.617161 8.3:-77291880 None:intergenic
GATGGTGATTTGGACCAAGT+TGG 0.630366 8.3:+77292302 MS.gene020088:CDS
GAAACCGGTTGGCCTAATGA+TGG 0.634825 8.3:+77292284 MS.gene020088:CDS
ACATGTGAATTGGTTCAACC+CGG 0.637557 8.3:+77292680 MS.gene020088:CDS
ATGATTATAAAGGGAAGGCG+TGG 0.641910 8.3:+77292582 MS.gene020088:CDS
TACATGGCAGGTACAATGTG+GGG 0.663864 8.3:-77291879 None:intergenic
GGCAGAGGGAGCTAACAAGA+CGG 0.675730 8.3:+77292613 MS.gene020088:CDS
TCTTGCCACTCAAATTGCAG+AGG 0.690039 8.3:+77292808 MS.gene020088:CDS
AAAGATGGAAGAATTGAACC+CGG 0.705846 8.3:-77292410 None:intergenic
TGTCATATGCTTGCTCACAG+GGG 0.741994 8.3:+77292651 MS.gene020088:CDS
AGAGGGAGCTAACAAGACGG+CGG 0.751348 8.3:+77292616 MS.gene020088:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATTTAATAACTCTTTAA+AGG - chr8.3:77291313-77291332 None:intergenic 10.0%
!! ATTAATGTAGTAAATAAATA+AGG - chr8.3:77290662-77290681 None:intergenic 10.0%
!! TTAATGTAGTAAATAAATAA+GGG - chr8.3:77290661-77290680 None:intergenic 10.0%
!! AATTAAAAAAACAACTTACT+TGG - chr8.3:77292836-77292855 None:intergenic 15.0%
!! TAATCCAAGTTAATATTAAT+AGG - chr8.3:77292122-77292141 None:intergenic 15.0%
!! TAATGTAGTAAATAAATAAG+GGG - chr8.3:77290660-77290679 None:intergenic 15.0%
!! TTAAAATCAAAACATGATTA+TGG - chr8.3:77292933-77292952 None:intergenic 15.0%
!! TTAAAATCTAAATGAATGTT+TGG - chr8.3:77290994-77291013 None:intergenic 15.0%
!!! ATATAATCATTCAGTTTTTA+TGG - chr8.3:77292889-77292908 None:intergenic 15.0%
!!! CGAAATAATAATTATTTCTA+TGG + chr8.3:77291022-77291041 MS.gene020088:intron 15.0%
!! AATGTAGTAAATAAATAAGG+GGG - chr8.3:77290659-77290678 None:intergenic 20.0%
!! AGATCCTATTAATATTAACT+TGG + chr8.3:77292115-77292134 MS.gene020088:CDS 20.0%
!! GAGTTATTAAATTATACTCA+TGG + chr8.3:77291318-77291337 MS.gene020088:intron 20.0%
!! TACAGAGAAAATATAAAAGA+TGG - chr8.3:77292428-77292447 None:intergenic 20.0%
!!! TAAATGAATGTTTGGTTTTA+GGG - chr8.3:77290986-77291005 None:intergenic 20.0%
!!! TACTAATTTGTTTGATCAAA+TGG + chr8.3:77292199-77292218 MS.gene020088:CDS 20.0%
!!! TCAAGTTTTTCTTTTAACTA+TGG - chr8.3:77291152-77291171 None:intergenic 20.0%
! AAGGAAAATGTACAAAGTAT+CGG - chr8.3:77293001-77293020 None:intergenic 25.0%
! ACATGTAAAAACTCTAACAT+TGG - chr8.3:77292044-77292063 None:intergenic 25.0%
! ATGCAAACCAAAAATAGTTA+AGG - chr8.3:77291919-77291938 None:intergenic 25.0%
! CTTACTTGATATAGTGAATA+AGG - chr8.3:77290609-77290628 None:intergenic 25.0%
! GAAGTTTCTATTATATGTAC+CGG - chr8.3:77292345-77292364 None:intergenic 25.0%
! GATTCTATCTATGCAATATT+CGG + chr8.3:77291391-77291410 MS.gene020088:intron 25.0%
! GGTCAAACATAAAAACAAAA+GGG - chr8.3:77292980-77292999 None:intergenic 25.0%
! GTATAATGAGAACTTGAAAA+CGG + chr8.3:77292445-77292464 MS.gene020088:CDS 25.0%
! TAATAGAAACTTCGTGAAAA+AGG + chr8.3:77292352-77292371 MS.gene020088:CDS 25.0%
! TATAATGAGAACTTGAAAAC+GGG + chr8.3:77292446-77292465 MS.gene020088:CDS 25.0%
!! AAACACTCCTTAACTATTTT+TGG + chr8.3:77291909-77291928 MS.gene020088:CDS 25.0%
!! ACATTTGTTACAAGTTCATT+GGG - chr8.3:77291732-77291751 None:intergenic 25.0%
!! TACATTTGTTACAAGTTCAT+TGG - chr8.3:77291733-77291752 None:intergenic 25.0%
!! TTGTACATTTTCCTTTTTGA+AGG + chr8.3:77293006-77293025 MS.gene020088:intron 25.0%
!!! ATGTTGTTTCAAGATCAATT+TGG - chr8.3:77291464-77291483 None:intergenic 25.0%
!!! ATTTTCCTTTTTGAAGGTTA+TGG + chr8.3:77293012-77293031 MS.gene020088:intron 25.0%
!!! CTAAATGAATGTTTGGTTTT+AGG - chr8.3:77290987-77291006 None:intergenic 25.0%
!!! TAATTTGTTTGATCAAATGG+TGG + chr8.3:77292202-77292221 MS.gene020088:CDS 25.0%
AAACACAGACTAAATAGTGA+TGG - chr8.3:77290881-77290900 None:intergenic 30.0%
AACACAGACTAAATAGTGAT+GGG - chr8.3:77290880-77290899 None:intergenic 30.0%
AAGATCCATAACCTTCAAAA+AGG - chr8.3:77293020-77293039 None:intergenic 30.0%
AATAGAGATAGCTTCTTACA+TGG + chr8.3:77290938-77290957 MS.gene020088:intron 30.0%
ATATCATGAGAAAGCTAAGA+TGG + chr8.3:77290793-77290812 MS.gene020088:intron 30.0%
CGGTCAAACATAAAAACAAA+AGG - chr8.3:77292981-77293000 None:intergenic 30.0%
GCGATAAATATCTGAATATC+CGG - chr8.3:77292263-77292282 None:intergenic 30.0%
GTTGAACTTGATTGCATATT+TGG + chr8.3:77290842-77290861 MS.gene020088:intron 30.0%
TGAGTATTCTCTCTTTACTT+GGG + chr8.3:77291416-77291435 MS.gene020088:intron 30.0%
TTGAGTATTCTCTCTTTACT+TGG + chr8.3:77291415-77291434 MS.gene020088:intron 30.0%
! ATCATCAAATGCTAGCTTAA+TGG - chr8.3:77291250-77291269 None:intergenic 30.0%
! CTTAATGGATACATCAAGAT+TGG - chr8.3:77291235-77291254 None:intergenic 30.0%
!! TTTCTAAATGTGCCATTTGA+AGG - chr8.3:77291996-77292015 None:intergenic 30.0%
!!! ATGAGTGTTTTTGAGTAGAA+AGG - chr8.3:77291804-77291823 None:intergenic 30.0%
!!! ATGTGTATCCATTTTTTGCT+TGG + chr8.3:77292087-77292106 MS.gene020088:CDS 30.0%
AAAGATGGAAGAATTGAACC+CGG - chr8.3:77292413-77292432 None:intergenic 35.0%
AAAGGTTACGAAAAAACCTC+CGG + chr8.3:77292370-77292389 MS.gene020088:CDS 35.0%
AATGGATACATCAAGATTGG+AGG - chr8.3:77291232-77291251 None:intergenic 35.0%
ACATCATTTCCACCTTCAAA+TGG + chr8.3:77291981-77292000 MS.gene020088:CDS 35.0%
ACCAAACACTTGCAAATCAA+TGG + chr8.3:77291760-77291779 MS.gene020088:CDS 35.0%
ACCAGATGATTATAAAGGGA+AGG + chr8.3:77292577-77292596 MS.gene020088:CDS 35.0%
AGCTATCTCTATTCGTTTGA+AGG - chr8.3:77290931-77290950 None:intergenic 35.0%
AGTGAGAATAAACTTGTGCA+TGG - chr8.3:77291072-77291091 None:intergenic 35.0%
ATGGTGTACAAGTGAAGTAA+GGG + chr8.3:77291041-77291060 MS.gene020088:intron 35.0%
ATTGCATCAAGTGAGATATG+GGG + chr8.3:77291113-77291132 MS.gene020088:intron 35.0%
ATTTACGAGATTGACCTTTC+TGG + chr8.3:77292518-77292537 MS.gene020088:CDS 35.0%
CAGATATTTATCGCTGAAAC+CGG + chr8.3:77292269-77292288 MS.gene020088:CDS 35.0%
CATTGCATCAAGTGAGATAT+GGG + chr8.3:77291112-77291131 MS.gene020088:intron 35.0%
CCAAACACTTGCAAATCAAT+GGG + chr8.3:77291761-77291780 MS.gene020088:CDS 35.0%
CTCATTCGTTATCTTCTTGT+TGG + chr8.3:77291819-77291838 MS.gene020088:CDS 35.0%
GGTTTGCATAAAGTCAAAGT+TGG + chr8.3:77291930-77291949 MS.gene020088:CDS 35.0%
GTAGTAAATAAATAAGGGGG+AGG - chr8.3:77290656-77290675 None:intergenic 35.0%
GTTGAACCAATTCACATGTT+CGG - chr8.3:77292679-77292698 None:intergenic 35.0%
TATGGTGTACAAGTGAAGTA+AGG + chr8.3:77291040-77291059 MS.gene020088:intron 35.0%
TCATTGCATCAAGTGAGATA+TGG + chr8.3:77291111-77291130 MS.gene020088:intron 35.0%
TCTCATGATATGATGCTTCA+AGG - chr8.3:77290784-77290803 None:intergenic 35.0%
TGTAAAACATCCATTGCCAA+AGG - chr8.3:77291960-77291979 None:intergenic 35.0%
TTCCCTTTATAATCATCTGG+TGG - chr8.3:77292578-77292597 None:intergenic 35.0%
! GTTTTTGATGAGTGATACTG+AGG - chr8.3:77291619-77291638 None:intergenic 35.0%
! TCTGAAGTCCAAGCAAAAAA+TGG - chr8.3:77292098-77292117 None:intergenic 35.0%
!! ATTTGCAAGTGTTTGGTTTG+AGG - chr8.3:77291757-77291776 None:intergenic 35.0%
!! CTATGCGTTTAGTTCTTACT+GGG + chr8.3:77292745-77292764 MS.gene020088:CDS 35.0%
!! GTCATAGATTTTGACACGTT+TGG - chr8.3:77291649-77291668 None:intergenic 35.0%
!! TTTTGAGTCCGATAACATCA+CGG + chr8.3:77292148-77292167 MS.gene020088:CDS 35.0%
!!! GTTTGGTTTTAGGGTGAAAT+TGG - chr8.3:77290977-77290996 None:intergenic 35.0%
!!! TTTTTGAGTAGAAAGGTACG+AGG - chr8.3:77291797-77291816 None:intergenic 35.0%
AACTGAATCAGGTTCGAAAC+AGG - chr8.3:77292711-77292730 None:intergenic 40.0%
AAGACCCATGTGAGTTAGTA+TGG - chr8.3:77291209-77291228 None:intergenic 40.0%
ACCACCATACTAACTCACAT+GGG + chr8.3:77291202-77291221 MS.gene020088:intron 40.0%
ACTGAATCAGGTTCGAAACA+GGG - chr8.3:77292710-77292729 None:intergenic 40.0%
AGTCAAAGTTGGAACACCTT+TGG + chr8.3:77291941-77291960 MS.gene020088:CDS 40.0%
AGTTGTCCATAATTCACTCC+TGG - chr8.3:77291570-77291589 None:intergenic 40.0%
ATAAACCACTCGAGAAGATG+AGG + chr8.3:77292907-77292926 MS.gene020088:intron 40.0%
ATCCGTAACCGTGATGTTAT+CGG - chr8.3:77292159-77292178 None:intergenic 40.0%
ATGAGTGATACTGAGGTTGT+TGG - chr8.3:77291612-77291631 None:intergenic 40.0%
ATGATTATAAAGGGAAGGCG+TGG + chr8.3:77292582-77292601 MS.gene020088:CDS 40.0%
ATTGTCATATGCTTGCTCAC+AGG + chr8.3:77292649-77292668 MS.gene020088:CDS 40.0%
CCTCAACAACAAACCAAACA+TGG + chr8.3:77291856-77291875 MS.gene020088:CDS 40.0%
CCTTTATAATCATCTGGTGG+CGG - chr8.3:77292575-77292594 None:intergenic 40.0%
CGCCACCAGATGATTATAAA+GGG + chr8.3:77292573-77292592 MS.gene020088:CDS 40.0%
CGTAAATACTCGACCCATTT+GGG - chr8.3:77292505-77292524 None:intergenic 40.0%
GCCTTCCCTTTATAATCATC+TGG - chr8.3:77292581-77292600 None:intergenic 40.0%
GGAGTGAATTATGGACAACT+AGG + chr8.3:77291570-77291589 MS.gene020088:CDS 40.0%
GGTTAGAAAATTGGGGTTAG+AGG - chr8.3:77291515-77291534 None:intergenic 40.0%
TATTTATCGCTGAAACCGGT+TGG + chr8.3:77292273-77292292 MS.gene020088:CDS 40.0%
TCGGGTTATTGTACCCAAAT+GGG + chr8.3:77292489-77292508 MS.gene020088:CDS 40.0%
TCGTAAATACTCGACCCATT+TGG - chr8.3:77292506-77292525 None:intergenic 40.0%
TGGTCCAAATCACCATCATT+AGG - chr8.3:77292299-77292318 None:intergenic 40.0%
TGTGAATATTCGCACCAACT+TGG - chr8.3:77292319-77292338 None:intergenic 40.0%
TGTTTCATTCTGTACATGGC+AGG - chr8.3:77291894-77291913 None:intergenic 40.0%
TTACGAAAAAACCTCCGGTT+GGG + chr8.3:77292375-77292394 MS.gene020088:CDS 40.0%
TTCGAACCTGATTCAGTTGT+TGG + chr8.3:77292713-77292732 MS.gene020088:CDS 40.0%
TTGCATCAAGTGAGATATGG+GGG + chr8.3:77291114-77291133 MS.gene020088:intron 40.0%
TTGGAACTGTTAGAAACCCA+TGG - chr8.3:77291445-77291464 None:intergenic 40.0%
TTGTCATATGCTTGCTCACA+GGG + chr8.3:77292650-77292669 MS.gene020088:CDS 40.0%
! AAGTTCATTGGGAAGCATGA+TGG - chr8.3:77291721-77291740 None:intergenic 40.0%
! AATGGCTTAAGCTCTGACTT+CGG - chr8.3:77292551-77292570 None:intergenic 40.0%
! ACATGTGAATTGGTTCAACC+CGG + chr8.3:77292680-77292699 MS.gene020088:CDS 40.0%
! CTAACCCCAATTTTCTAACC+TGG + chr8.3:77291515-77291534 MS.gene020088:intron 40.0%
! CTATTCGTTTGAAGGTGTGA+AGG - chr8.3:77290923-77290942 None:intergenic 40.0%
! GAGAACTTGAAAACGGGTTT+GGG + chr8.3:77292452-77292471 MS.gene020088:CDS 40.0%
! GGAGTGTTTCATTCTGTACA+TGG - chr8.3:77291898-77291917 None:intergenic 40.0%
! GTGTGAAGGTGTGAAATTGT+TGG - chr8.3:77290909-77290928 None:intergenic 40.0%
! TGAGAACTTGAAAACGGGTT+TGG + chr8.3:77292451-77292470 MS.gene020088:CDS 40.0%
! TTCGGGTTATTGTACCCAAA+TGG + chr8.3:77292488-77292507 MS.gene020088:CDS 40.0%
! TTGGATTCCAGTGTTTTCGA+GGG - chr8.3:77291694-77291713 None:intergenic 40.0%
! TTGGCCTAATGATGGTGATT+TGG + chr8.3:77292292-77292311 MS.gene020088:CDS 40.0%
!! CCATGTTTGGTTTGTTGTTG+AGG - chr8.3:77291859-77291878 None:intergenic 40.0%
!! CCCATTGATTTGCAAGTGTT+TGG - chr8.3:77291764-77291783 None:intergenic 40.0%
!! CTAAATGTGCCATTTGAAGG+TGG - chr8.3:77291993-77292012 None:intergenic 40.0%
!! GCTATGCGTTTAGTTCTTAC+TGG + chr8.3:77292744-77292763 MS.gene020088:CDS 40.0%
!! GTTTGATCAAATGGTGGATG+CGG + chr8.3:77292208-77292227 MS.gene020088:CDS 40.0%
!!! TTTTGACACGTTTGGCTTTG+AGG - chr8.3:77291641-77291660 None:intergenic 40.0%
AACATCACGGTTACGGATTC+TGG + chr8.3:77292161-77292180 MS.gene020088:CDS 45.0%
ACCCATGTGAGTTAGTATGG+TGG - chr8.3:77291206-77291225 None:intergenic 45.0%
AGTTGGAACACCTTTGGCAA+TGG + chr8.3:77291947-77291966 MS.gene020088:CDS 45.0%
ATCACCATCATTAGGCCAAC+CGG - chr8.3:77292291-77292310 None:intergenic 45.0%
CACCACCATACTAACTCACA+TGG + chr8.3:77291201-77291220 MS.gene020088:intron 45.0%
CCGCCACCAGATGATTATAA+AGG + chr8.3:77292572-77292591 MS.gene020088:CDS 45.0%
CTCTTTACTTGGGCTACCAT+GGG + chr8.3:77291426-77291445 MS.gene020088:intron 45.0%
GATACTGAGGTTGTTGGTGT+TGG - chr8.3:77291606-77291625 None:intergenic 45.0%
GCACAACCAGGAGTGAATTA+TGG + chr8.3:77291561-77291580 MS.gene020088:CDS 45.0%
GCATGACCAACAACTGAATC+AGG - chr8.3:77292722-77292741 None:intergenic 45.0%
GGGGAGGAGATAAATAGAGA+GGG - chr8.3:77290640-77290659 None:intergenic 45.0%
GGTGCGAATATTCACAATGC+CGG + chr8.3:77292323-77292342 MS.gene020088:CDS 45.0%
GGTGGCCAGGTTAGAAAATT+GGG - chr8.3:77291523-77291542 None:intergenic 45.0%
GTACATGGCAGGTACAATGT+GGG - chr8.3:77291883-77291902 None:intergenic 45.0%
GTCCGATAACATCACGGTTA+CGG + chr8.3:77292154-77292173 MS.gene020088:CDS 45.0%
GTGGCCAGGTTAGAAAATTG+GGG - chr8.3:77291522-77291541 None:intergenic 45.0%
GTTACGAAAAAACCTCCGGT+TGG + chr8.3:77292374-77292393 MS.gene020088:CDS 45.0%
GTTCTTACTGGGCTCAGTTT+AGG + chr8.3:77292756-77292775 MS.gene020088:CDS 45.0%
TACATGGCAGGTACAATGTG+GGG - chr8.3:77291882-77291901 None:intergenic 45.0%
TCTCTTTACTTGGGCTACCA+TGG + chr8.3:77291425-77291444 MS.gene020088:intron 45.0%
TCTTGCCACTCAAATTGCAG+AGG + chr8.3:77292808-77292827 MS.gene020088:CDS 45.0%
TGCATCAAGTGAGATATGGG+GGG + chr8.3:77291115-77291134 MS.gene020088:intron 45.0%
TGGATCCTCTGCAATTTGAG+TGG - chr8.3:77292816-77292835 None:intergenic 45.0%
TGGTGGCCAGGTTAGAAAAT+TGG - chr8.3:77291524-77291543 None:intergenic 45.0%
TGTACATGGCAGGTACAATG+TGG - chr8.3:77291884-77291903 None:intergenic 45.0%
TGTCATATGCTTGCTCACAG+GGG + chr8.3:77292651-77292670 MS.gene020088:CDS 45.0%
! AGAAAGGTACGAGGTTGGTT+TGG - chr8.3:77291788-77291807 None:intergenic 45.0%
! AGGTTCGAAACAGGGTTTTC+CGG - chr8.3:77292702-77292721 None:intergenic 45.0%
! ATTTTGCAATGGAGCGGCTT+GGG + chr8.3:77292234-77292253 MS.gene020088:CDS 45.0%
! CGGTGTATTTTGCAATGGAG+CGG + chr8.3:77292228-77292247 MS.gene020088:CDS 45.0%
! CTCAGTTTAGGAGTGTAGGT+GGG + chr8.3:77292768-77292787 MS.gene020088:CDS 45.0%
! CTTGAAAACGGGTTTGGGTA+CGG + chr8.3:77292457-77292476 MS.gene020088:CDS 45.0%
! CTTGGATTCCAGTGTTTTCG+AGG - chr8.3:77291695-77291714 None:intergenic 45.0%
! GATGGTGATTTGGACCAAGT+TGG + chr8.3:77292302-77292321 MS.gene020088:CDS 45.0%
! GGATGCGGTGTATTTTGCAA+TGG + chr8.3:77292223-77292242 MS.gene020088:CDS 45.0%
! TATTTTGCAATGGAGCGGCT+TGG + chr8.3:77292233-77292252 MS.gene020088:CDS 45.0%
! TGAGTAGAAAGGTACGAGGT+TGG - chr8.3:77291793-77291812 None:intergenic 45.0%
!! TGGGAAGCATGATGGATACT+TGG - chr8.3:77291713-77291732 None:intergenic 45.0%
!!! TATTTTAATTTTTCATATAT+TGG + chr8.3:77290818-77290837 MS.gene020088:intron 5.0%
ACGGTTACGGATTCTGGTAC+GGG + chr8.3:77292167-77292186 MS.gene020088:CDS 50.0%
ACTTCGGCGTCTTTCCAGAA+AGG - chr8.3:77292535-77292554 None:intergenic 50.0%
CACGGTTACGGATTCTGGTA+CGG + chr8.3:77292166-77292185 MS.gene020088:CDS 50.0%
CTCAAAGCCCTCGAAAACAC+TGG + chr8.3:77291684-77291703 MS.gene020088:CDS 50.0%
GCAGAAATCTCAGCACAACC+AGG + chr8.3:77291549-77291568 MS.gene020088:CDS 50.0%
GGGGAACCGAACATGTGAAT+TGG + chr8.3:77292670-77292689 MS.gene020088:CDS 50.0%
GGGGGAGGAGATAAATAGAG+AGG - chr8.3:77290641-77290660 None:intergenic 50.0%
GGTGGGACTTGCAACTTCAA+TGG + chr8.3:77292785-77292804 MS.gene020088:CDS 50.0%
GTACAATGTGGGGCCATGTT+TGG - chr8.3:77291872-77291891 None:intergenic 50.0%
TACGGATTCTGGTACGGGTT+TGG + chr8.3:77292172-77292191 MS.gene020088:CDS 50.0%
TATGGCCTCATCTTCTCGAG+TGG - chr8.3:77292915-77292934 None:intergenic 50.0%
TGAGATTTCTGCACCTGTGG+TGG - chr8.3:77291541-77291560 None:intergenic 50.0%
TGCTGAGATTTCTGCACCTG+TGG - chr8.3:77291544-77291563 None:intergenic 50.0%
! GCTCAGTTTAGGAGTGTAGG+TGG + chr8.3:77292767-77292786 MS.gene020088:CDS 50.0%
! GGTTCGAAACAGGGTTTTCC+GGG - chr8.3:77292701-77292720 None:intergenic 50.0%
! TGGGCTCAGTTTAGGAGTGT+AGG + chr8.3:77292764-77292783 MS.gene020088:CDS 50.0%
! TTTTCTAACCTGGCCACCAC+AGG + chr8.3:77291525-77291544 MS.gene020088:intron 50.0%
!! CAGTGTTTTCGAGGGCTTTG+AGG - chr8.3:77291686-77291705 None:intergenic 50.0%
!! GAAACCGGTTGGCCTAATGA+TGG + chr8.3:77292284-77292303 MS.gene020088:CDS 50.0%
!! TAATCATCTGGTGGCGGCAA+TGG - chr8.3:77292569-77292588 None:intergenic 50.0%
!! TCGAGGGCTTTGAGGATTTG+TGG - chr8.3:77291678-77291697 None:intergenic 50.0%
AAAACCTCCGGTTGGGACAC+CGG + chr8.3:77292382-77292401 MS.gene020088:CDS 55.0%
AGAATTGAACCCGGTCGAGC+CGG - chr8.3:77292404-77292423 None:intergenic 55.0%
AGAGGGAGCTAACAAGACGG+CGG + chr8.3:77292616-77292635 MS.gene020088:CDS 55.0%
AGCTAACAAGACGGCGGTAG+TGG + chr8.3:77292622-77292641 MS.gene020088:CDS 55.0%
GGCAGAGGGAGCTAACAAGA+CGG + chr8.3:77292613-77292632 MS.gene020088:CDS 55.0%
! AATGGAGCGGCTTGGGTATC+CGG + chr8.3:77292241-77292260 MS.gene020088:CDS 55.0%
! TAAAGGGAAGGCGTGGTGTG+TGG + chr8.3:77292589-77292608 MS.gene020088:CDS 55.0%
! TTGGGTACGGAGCGTCACTT+CGG + chr8.3:77292470-77292489 MS.gene020088:CDS 55.0%
TTTCTGCACCTGTGGTGGCC+AGG - chr8.3:77291536-77291555 None:intergenic 60.0%
! TGGGTACGGAGCGTCACTTC+GGG + chr8.3:77292471-77292490 MS.gene020088:CDS 60.0%
GCGTGGTGTGTGGTGGCAGA+GGG + chr8.3:77292599-77292618 MS.gene020088:CDS 65.0%
! AGGGAAGGCGTGGTGTGTGG+TGG + chr8.3:77292592-77292611 MS.gene020088:CDS 65.0%
GGCGTGGTGTGTGGTGGCAG+AGG + chr8.3:77292598-77292617 MS.gene020088:CDS 70.0%
GGTCGAGCCGGTGTCCCAAC+CGG - chr8.3:77292392-77292411 None:intergenic 70.0%
!! GGTTGGGACACCGGCTCGAC+CGG + chr8.3:77292391-77292410 MS.gene020088:CDS 70.0%
!! GTTGGGACACCGGCTCGACC+GGG + chr8.3:77292392-77292411 MS.gene020088:CDS 70.0%
CGAGCCGGTGTCCCAACCGG+AGG - chr8.3:77292389-77292408 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 77290560 77293065 77290560 ID=MS.gene020088
chr8.3 mRNA 77290560 77293065 77290560 ID=MS.gene020088.t1;Parent=MS.gene020088
chr8.3 exon 77290560 77290623 77290560 ID=MS.gene020088.t1.exon1;Parent=MS.gene020088.t1
chr8.3 CDS 77290560 77290623 77290560 ID=cds.MS.gene020088.t1;Parent=MS.gene020088.t1
chr8.3 exon 77291547 77292836 77291547 ID=MS.gene020088.t1.exon2;Parent=MS.gene020088.t1
chr8.3 CDS 77291547 77292836 77291547 ID=cds.MS.gene020088.t1;Parent=MS.gene020088.t1
chr8.3 exon 77293028 77293065 77293028 ID=MS.gene020088.t1.exon3;Parent=MS.gene020088.t1
chr8.3 CDS 77293028 77293065 77293028 ID=cds.MS.gene020088.t1;Parent=MS.gene020088.t1
Gene Sequence

>MS.gene020088

ATGAAAGCAATAGCTATGGTTGTGATTTTTCTATTTATCTTCTCTTCCTTATTCACTATATCAAGTAAGTCATTTCTCCCTCTCTATTTATCTCCTCCCCCTTATTTATTTACTACATTAATCAAAATCACAAACTTTGAGTTATTTTTATTTATTTATTTATTTTCAACATGAATCAACTTTCATCTTTTAAAATGTAAAAAAATTCTTGATCTTGTCTACCTTGAAGCATCATATCATGAGAAAGCTAAGATGGTATATTTTAATTTTTCATATATTGGAGTTGAACTTGATTGCATATTTGGAGACTAATTAATCCCATCACTATTTAGTCTGTGTTTGTAAACCAACAATTTCACACCTTCACACCTTCAAACGAATAGAGATAGCTTCTTACATGGCACTTTAGTTTTACCAATTTCACCCTAAAACCAAACATTCATTTAGATTTTAAGTTTCTCACGAAATAATAATTATTTCTATGGTGTACAAGTGAAGTAAGGGTTGTACCATGCACAAGTTTATTCTCACTATTAAATTAATAAGTCTCATCATTGCATCAAGTGAGATATGGGGGGACATATTGATTCCATAGTTAAAAGAAAAACTTGAAAATTGTGTAACACTGTACTTATGAACTACACCACCATACTAACTCACATGGGTCTTCCTCCAATCTTGATGTATCCATTAAGCTAGCATTTGATGATCATTCACTCAATTGTGTTAAAGTGTATAAATTACATTAATCCTTTAAAGAGTTATTAAATTATACTCATGGAGTATATATAATATAAGTCTCTTTATATGCTTTGATGCAGTTACTTTTTCGATTCTATCTATGCAATATTCGGTTTGAGTATTCTCTCTTTACTTGGGCTACCATGGGTTTCTAACAGTTCCAAATTGATCTTGAAACAACATTTGTGATTATTATATAACGTAGTTTTTTCCTCTAACCCCAATTTTCTAACCTGGCCACCACAGGTGCAGAAATCTCAGCACAACCAGGAGTGAATTATGGACAACTAGGAAACAATCTTCCAACACCAACAACCTCAGTATCACTCATCAAAAACCTCAAAGCCAAACGTGTCAAAATCTATGACGCAAATCCACAAATCCTCAAAGCCCTCGAAAACACTGGAATCCAAGTATCCATCATGCTTCCCAATGAACTTGTAACAAATGTATCCTCAAACCAAACACTTGCAAATCAATGGGTCCAAACCAACCTCGTACCTTTCTACTCAAAAACACTCATTCGTTATCTTCTTGTTGGTAATGAACTCATTTCCTCAACAACAAACCAAACATGGCCCCACATTGTACCTGCCATGTACAGAATGAAACACTCCTTAACTATTTTTGGTTTGCATAAAGTCAAAGTTGGAACACCTTTGGCAATGGATGTTTTACAAACATCATTTCCACCTTCAAATGGCACATTTAGAAATGACATTGCGTTGAGTGTTATGAAACCAATGTTAGAGTTTTTACATGTCACAAACTCTTTTTTCTTCTTAGATGTGTATCCATTTTTTGCTTGGACTTCAGATCCTATTAATATTAACTTGGATTATGCTCTTTTTGAGTCCGATAACATCACGGTTACGGATTCTGGTACGGGTTTGGTTTATACTAATTTGTTTGATCAAATGGTGGATGCGGTGTATTTTGCAATGGAGCGGCTTGGGTATCCGGATATTCAGATATTTATCGCTGAAACCGGTTGGCCTAATGATGGTGATTTGGACCAAGTTGGTGCGAATATTCACAATGCCGGTACATATAATAGAAACTTCGTGAAAAAGGTTACGAAAAAACCTCCGGTTGGGACACCGGCTCGACCGGGTTCAATTCTTCCATCTTTTATATTTTCTCTGTATAATGAGAACTTGAAAACGGGTTTGGGTACGGAGCGTCACTTCGGGTTATTGTACCCAAATGGGTCGAGTATTTACGAGATTGACCTTTCTGGAAAGACGCCGAAGTCAGAGCTTAAGCCATTGCCGCCACCAGATGATTATAAAGGGAAGGCGTGGTGTGTGGTGGCAGAGGGAGCTAACAAGACGGCGGTAGTGGAAGCATTGTCATATGCTTGCTCACAGGGGAACCGAACATGTGAATTGGTTCAACCCGGAAAACCCTGTTTCGAACCTGATTCAGTTGTTGGTCATGCTAGCTATGCGTTTAGTTCTTACTGGGCTCAGTTTAGGAGTGTAGGTGGGACTTGCAACTTCAATGGTCTTGCCACTCAAATTGCAGAGGATCCAAGTAAGTTGTTTTTTTAATTGCTTTAAGAACATTTATTTTAGTTATACTTCCATAAAAACTGAATGATTATATAAACCACTCGAGAAGATGAGGCCATAATCATGTTTTGATTTTAAAATCATTTTGTAATATTGATCATACCCTTTTGTTTTTATGTTTGACCGATACTTTGTACATTTTCCTTTTTGAAGGTTATGGATCTTGCAAATACCCAAATGTGATTCTTTGA
Protein sequence

>MS.gene020088.t1

MKAIAMVVIFLFIFSSLFTISSAEISAQPGVNYGQLGNNLPTPTTSVSLIKNLKAKRVKIYDANPQILKALENTGIQVSIMLPNELVTNVSSNQTLANQWVQTNLVPFYSKTLIRYLLVGNELISSTTNQTWPHIVPAMYRMKHSLTIFGLHKVKVGTPLAMDVLQTSFPPSNGTFRNDIALSVMKPMLEFLHVTNSFFFLDVYPFFAWTSDPININLDYALFESDNITVTDSGTGLVYTNLFDQMVDAVYFAMERLGYPDIQIFIAETGWPNDGDLDQVGANIHNAGTYNRNFVKKVTKKPPVGTPARPGSILPSFIFSLYNENLKTGLGTERHFGLLYPNGSSIYEIDLSGKTPKSELKPLPPPDDYKGKAWCVVAEGANKTAVVEALSYACSQGNRTCELVQPGKPCFEPDSVVGHASYAFSSYWAQFRSVGGTCNFNGLATQIAEDPSYGSCKYPNVIL