Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020134.t1 | XP_003626907.1 | 100 | 138 | 0 | 0 | 1 | 138 | 1 | 138 | 2.30E-68 | 268.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020134.t1 | O48890 | 90.6 | 138 | 13 | 0 | 1 | 138 | 1 | 138 | 1.2e-65 | 250.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020134.t1 | G7LF25 | 100.0 | 138 | 0 | 0 | 1 | 138 | 1 | 138 | 1.7e-68 | 268.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene023153 | MS.gene020134 | PPI |
| MS.gene020134 | MS.gene35156 | PPI |
| MS.gene36491 | MS.gene020134 | PPI |
| MS.gene028301 | MS.gene020134 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020134.t1 | MTR_8g011890 | 100.000 | 138 | 0 | 0 | 1 | 138 | 1 | 138 | 2.20e-99 | 281 |
| MS.gene020134.t1 | MTR_2g027530 | 36.441 | 118 | 72 | 2 | 22 | 137 | 84 | 200 | 7.54e-18 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene020134.t1 | AT5G09920 | 90.580 | 138 | 13 | 0 | 1 | 138 | 1 | 138 | 5.88e-92 | 262 |
Find 20 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAACTGGCTTAAGAATTT+TGG | 0.113600 | 8.3:-77662493 | MS.gene020134:intron |
| CTGTGAAGTTTCATTAATTC+TGG | 0.198654 | 8.3:-77663501 | MS.gene020134:CDS |
| ATAGCTTCCTCCACAGTTTC+CGG | 0.216820 | 8.3:+77662265 | None:intergenic |
| ATTATTTATACCTTGATAGA+TGG | 0.298215 | 8.3:+77662232 | None:intergenic |
| TAGCTTCCTCCACAGTTTCC+GGG | 0.386486 | 8.3:+77662266 | None:intergenic |
| ATATCAGTTGGCTGAATTTG+AGG | 0.404625 | 8.3:-77662466 | MS.gene020134:intron |
| TCACTGAGAAACTTGATTCA+TGG | 0.413264 | 8.3:+77663439 | None:intergenic |
| CGAACTTGTCTAACAGCATC+AGG | 0.447560 | 8.3:+77663021 | None:intergenic |
| AAGAAGGAGTGAATCATGTC+TGG | 0.463358 | 8.3:-77664349 | None:intergenic |
| TTATTGCAGCTGTGTGTCCT+AGG | 0.470406 | 8.3:-77662298 | MS.gene020134:intron |
| GTGAATCATGTCTGGAGAAG+AGG | 0.498449 | 8.3:-77664341 | None:intergenic |
| TGCTATGGTTCCATCTATCA+AGG | 0.514493 | 8.3:-77662242 | MS.gene020134:intron |
| AACGCCGCTGAACTCAAAAT+CGG | 0.516766 | 8.3:-77664313 | MS.gene020134:CDS |
| GCAGACAAGAGGACGTGCTC+AGG | 0.538623 | 8.3:-77661272 | MS.gene020134:intron |
| TGTCCTAGGCAATCTTTGCC+CGG | 0.566090 | 8.3:-77662284 | MS.gene020134:CDS |
| CAATCTTTGCCCGGAAACTG+TGG | 0.593413 | 8.3:-77662275 | MS.gene020134:CDS |
| TTTCCGGGCAAAGATTGCCT+AGG | 0.601682 | 8.3:+77662281 | None:intergenic |
| TGTGGAGGAAGCTATTGCTA+TGG | 0.607311 | 8.3:-77662257 | MS.gene020134:CDS |
| GCTGAACTCAAAATCGGAGA+TGG | 0.615426 | 8.3:-77664307 | MS.gene020134:intron |
| TCTTTGCCCGGAAACTGTGG+AGG | 0.655428 | 8.3:-77662272 | MS.gene020134:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTAAATCATTTATGTT+TGG | - | chr8.3:77662767-77662786 | MS.gene020134:intron | 10.0% |
| !! | AGTAAAATTTACAATTTAGT+GGG | + | chr8.3:77661511-77661530 | None:intergenic | 15.0% |
| !! | ATAATTAAGTGAAGAATTAA+TGG | + | chr8.3:77661289-77661308 | None:intergenic | 15.0% |
| !! | TAACCTTATAATAATTGATA+GGG | - | chr8.3:77663990-77664009 | MS.gene020134:intron | 15.0% |
| !!! | AAGGAAATGTTATTTAATTT+AGG | + | chr8.3:77662332-77662351 | None:intergenic | 15.0% |
| !!! | AATAAAAAGTAATTTTGCTA+CGG | + | chr8.3:77662200-77662219 | None:intergenic | 15.0% |
| !!! | CTATTAAAATTTTATTGAGT+TGG | - | chr8.3:77663539-77663558 | MS.gene020134:intron | 15.0% |
| !!! | CTTTATTTTATCTTTTGTTA+CGG | + | chr8.3:77661608-77661627 | None:intergenic | 15.0% |
| !!! | TTTTTAATTAAAAGCATGTT+TGG | + | chr8.3:77662936-77662955 | None:intergenic | 15.0% |
| !! | AAGGTAAAAATTTCGAATTA+GGG | + | chr8.3:77661384-77661403 | None:intergenic | 20.0% |
| !! | AATCATGAGAAATAGAAAAT+GGG | + | chr8.3:77662581-77662600 | None:intergenic | 20.0% |
| !! | AATTATAGTACTGTTAAACA+TGG | - | chr8.3:77664061-77664080 | MS.gene020134:intron | 20.0% |
| !! | ACTTAAATGAAAATTGTGTT+GGG | - | chr8.3:77662610-77662629 | MS.gene020134:intron | 20.0% |
| !! | ATCATTGAAAATATGTCAAT+TGG | + | chr8.3:77662368-77662387 | None:intergenic | 20.0% |
| !! | ATTATTTATACCTTGATAGA+TGG | + | chr8.3:77663318-77663337 | None:intergenic | 20.0% |
| !! | CAGTAAAATTTACAATTTAG+TGG | + | chr8.3:77661512-77661531 | None:intergenic | 20.0% |
| !! | GTAACCTTATAATAATTGAT+AGG | - | chr8.3:77663989-77664008 | MS.gene020134:intron | 20.0% |
| !! | TAATAAAAGAGCTATCTAAA+TGG | + | chr8.3:77661851-77661870 | None:intergenic | 20.0% |
| !! | TACTTAAATGAAAATTGTGT+TGG | - | chr8.3:77662609-77662628 | MS.gene020134:intron | 20.0% |
| !! | TATATAAGCTGGAAATTAAT+CGG | + | chr8.3:77661544-77661563 | None:intergenic | 20.0% |
| !! | TCATTGAAAATATGTCAATT+GGG | + | chr8.3:77662367-77662386 | None:intergenic | 20.0% |
| !! | TTATTATGAAAGAAATGAGA+TGG | + | chr8.3:77662638-77662657 | None:intergenic | 20.0% |
| !! | TTTACAAAAATTCCCAAAAT+TGG | - | chr8.3:77663691-77663710 | MS.gene020134:intron | 20.0% |
| !!! | AATGAAAAAACTTCATTTTC+TGG | - | chr8.3:77663918-77663937 | MS.gene020134:intron | 20.0% |
| !!! | AGCAAAATTACTTTTTATTC+CGG | - | chr8.3:77662201-77662220 | MS.gene020134:intron | 20.0% |
| !!! | AGTTTTCACATTTTATTTTC+AGG | - | chr8.3:77663144-77663163 | MS.gene020134:intron | 20.0% |
| !!! | ATAAAAAGTAATTTTGCTAC+GGG | + | chr8.3:77662199-77662218 | None:intergenic | 20.0% |
| !!! | ATGAAAAAACTTCATTTTCT+GGG | - | chr8.3:77663919-77663938 | MS.gene020134:intron | 20.0% |
| !!! | TAAAATTTTATTGAGTTGGT+AGG | - | chr8.3:77663543-77663562 | MS.gene020134:intron | 20.0% |
| !!! | TTTATTTTCAGGATAAAGAA+AGG | - | chr8.3:77663155-77663174 | MS.gene020134:intron | 20.0% |
| !!! | TTTATTTTTCTTCTCCTTAA+TGG | - | chr8.3:77663756-77663775 | MS.gene020134:intron | 20.0% |
| !!! | TTTTATTTTGATACTATTGC+TGG | - | chr8.3:77662265-77662284 | MS.gene020134:CDS | 20.0% |
| !!! | TTTTTCCTTCTATTTTTTCA+GGG | - | chr8.3:77662453-77662472 | MS.gene020134:intron | 20.0% |
| ! | AAATACCCTGAAAAAATAGA+AGG | + | chr8.3:77662461-77662480 | None:intergenic | 25.0% |
| ! | AATATATTCCAGATTCATCA+TGG | - | chr8.3:77663865-77663884 | MS.gene020134:intron | 25.0% |
| ! | AGGAAAAGTTTACAAAAAGA+AGG | + | chr8.3:77663349-77663368 | None:intergenic | 25.0% |
| ! | ATAGAAAGAGATATTACGTA+GGG | + | chr8.3:77662986-77663005 | None:intergenic | 25.0% |
| ! | CAAGTACTTAATATATAAGC+TGG | + | chr8.3:77661555-77661574 | None:intergenic | 25.0% |
| ! | CTTAAATGAAAATTGTGTTG+GGG | - | chr8.3:77662611-77662630 | MS.gene020134:intron | 25.0% |
| ! | GAAATATCTACAAGTTATTG+TGG | - | chr8.3:77663660-77663679 | MS.gene020134:intron | 25.0% |
| ! | GAAGGTAAAAATTTCGAATT+AGG | + | chr8.3:77661385-77661404 | None:intergenic | 25.0% |
| ! | GAATCATGAGAAATAGAAAA+TGG | + | chr8.3:77662582-77662601 | None:intergenic | 25.0% |
| ! | GTAATAGAACATATTCACTT+GGG | + | chr8.3:77661482-77661501 | None:intergenic | 25.0% |
| ! | TAATAGAACATATTCACTTG+GGG | + | chr8.3:77661481-77661500 | None:intergenic | 25.0% |
| ! | TAATGATGTTGATATAGAAG+CGG | - | chr8.3:77662396-77662415 | MS.gene020134:intron | 25.0% |
| ! | TAGGACAAACATAAAGAATA+AGG | + | chr8.3:77661798-77661817 | None:intergenic | 25.0% |
| ! | TCACCCTATCAATTATTATA+AGG | + | chr8.3:77663996-77664015 | None:intergenic | 25.0% |
| !! | ACATCCTAATTTTTCGTTTA+GGG | - | chr8.3:77661407-77661426 | MS.gene020134:intron | 25.0% |
| !! | ATAACCAATCAGATTTTGAA+TGG | + | chr8.3:77661876-77661895 | None:intergenic | 25.0% |
| !! | TTCATGCTTGTTAAAATGAA+GGG | - | chr8.3:77663449-77663468 | MS.gene020134:CDS | 25.0% |
| !! | TTTCATGCTTGTTAAAATGA+AGG | - | chr8.3:77663448-77663467 | MS.gene020134:CDS | 25.0% |
| !! | TTTCTTTTAGATCAGCTATA+AGG | - | chr8.3:77661430-77661449 | MS.gene020134:intron | 25.0% |
| !! | TTTTACTGATGAGATAACAT+AGG | - | chr8.3:77664150-77664169 | MS.gene020134:intron | 25.0% |
| !! | TTTTCTGCTTATACAAAAAC+AGG | + | chr8.3:77661635-77661654 | None:intergenic | 25.0% |
| !! | TTTTGTAAACTTTTCCTGTT+GGG | - | chr8.3:77663352-77663371 | MS.gene020134:intron | 25.0% |
| !! | TTTTTGTAAACTTTTCCTGT+TGG | - | chr8.3:77663351-77663370 | MS.gene020134:intron | 25.0% |
| !!! | CTTATTTTTATAAGCTCTCT+AGG | + | chr8.3:77661678-77661697 | None:intergenic | 25.0% |
| !!! | GCAAAATTACTTTTTATTCC+GGG | - | chr8.3:77662202-77662221 | MS.gene020134:intron | 25.0% |
| !!! | GTTTTTCCTTCTATTTTTTC+AGG | - | chr8.3:77662452-77662471 | MS.gene020134:intron | 25.0% |
| !!! | TCATTTTAACAAGCATGAAA+GGG | + | chr8.3:77663448-77663467 | None:intergenic | 25.0% |
| !!! | TTCATTGGAACAGTTTTTTT+TGG | + | chr8.3:77663228-77663247 | None:intergenic | 25.0% |
| !!! | TTCATTTTAACAAGCATGAA+AGG | + | chr8.3:77663449-77663468 | None:intergenic | 25.0% |
| !!! | TTGGTTCAATTTTTAAGAGA+GGG | - | chr8.3:77662786-77662805 | MS.gene020134:intron | 25.0% |
| !!! | TTTGGTTCAATTTTTAAGAG+AGG | - | chr8.3:77662785-77662804 | MS.gene020134:intron | 25.0% |
| !!! | TTTTTTGGTAGTGAATTCAT+TGG | + | chr8.3:77663213-77663232 | None:intergenic | 25.0% |
| AAAAAAGTGAGATGCCATTA+AGG | + | chr8.3:77663773-77663792 | None:intergenic | 30.0% | |
| AAAAGCTGGAGGATATTATT+GGG | - | chr8.3:77663727-77663746 | MS.gene020134:intron | 30.0% | |
| AAACTAAACTTGCCTCTATA+TGG | - | chr8.3:77663964-77663983 | MS.gene020134:intron | 30.0% | |
| AGGAAAAACACATTACTCTA+AGG | + | chr8.3:77662441-77662460 | None:intergenic | 30.0% | |
| ATAAGGTTACAACCATATAG+AGG | + | chr8.3:77663979-77663998 | None:intergenic | 30.0% | |
| ATGGAGTAGAATATAAGTCT+AGG | + | chr8.3:77661832-77661851 | None:intergenic | 30.0% | |
| CGTAATAGAACATATTCACT+TGG | + | chr8.3:77661483-77661502 | None:intergenic | 30.0% | |
| CTGTGAAGTTTCATTAATTC+TGG | - | chr8.3:77662046-77662065 | MS.gene020134:intron | 30.0% | |
| GAAAATATGTCAATTGGGTT+TGG | + | chr8.3:77662362-77662381 | None:intergenic | 30.0% | |
| GAAACCCTAAACGAAAAATT+AGG | + | chr8.3:77661414-77661433 | None:intergenic | 30.0% | |
| GATAGAAAGAGATATTACGT+AGG | + | chr8.3:77662987-77663006 | None:intergenic | 30.0% | |
| GTAGTATTGTTTGATTGATG+TGG | - | chr8.3:77663569-77663588 | MS.gene020134:intron | 30.0% | |
| TAAAAGCTGGAGGATATTAT+TGG | - | chr8.3:77663726-77663745 | MS.gene020134:intron | 30.0% | |
| TAAGATCACAATCTGATACA+GGG | + | chr8.3:77663038-77663057 | None:intergenic | 30.0% | |
| TACACCATTCAAAATCTGAT+TGG | - | chr8.3:77661869-77661888 | MS.gene020134:intron | 30.0% | |
| TAGAAAGAGATATTACGTAG+GGG | + | chr8.3:77662985-77663004 | None:intergenic | 30.0% | |
| TATCAGATTGTGATCTTAAC+TGG | - | chr8.3:77663040-77663059 | MS.gene020134:CDS | 30.0% | |
| TTAAGATCACAATCTGATAC+AGG | + | chr8.3:77663039-77663058 | None:intergenic | 30.0% | |
| ! | ACTTATGAGTTCTCCAATTT+TGG | + | chr8.3:77663707-77663726 | None:intergenic | 30.0% |
| ! | AGGCAAGTTTAGTTTACAAT+TGG | + | chr8.3:77663959-77663978 | None:intergenic | 30.0% |
| ! | ATTTTGAACCATGATGAATC+TGG | + | chr8.3:77663876-77663895 | None:intergenic | 30.0% |
| ! | CACATCCTAATTTTTCGTTT+AGG | - | chr8.3:77661406-77661425 | MS.gene020134:intron | 30.0% |
| ! | CTTATGAGTTCTCCAATTTT+GGG | + | chr8.3:77663706-77663725 | None:intergenic | 30.0% |
| ! | GAAATAGAAAATGGGTTCAT+CGG | + | chr8.3:77662573-77662592 | None:intergenic | 30.0% |
| ! | GATGAATCTGGAATATATTC+CGG | + | chr8.3:77663864-77663883 | None:intergenic | 30.0% |
| ! | TCATGCTTGTTAAAATGAAG+GGG | - | chr8.3:77663450-77663469 | MS.gene020134:CDS | 30.0% |
| ! | TGATTTTTCTCTTGTCTTTC+TGG | - | chr8.3:77662689-77662708 | MS.gene020134:intron | 30.0% |
| ! | TGGAAATTAATCGGTTTAAG+TGG | + | chr8.3:77661535-77661554 | None:intergenic | 30.0% |
| !! | CTTAACTGGCTTAAGAATTT+TGG | - | chr8.3:77663054-77663073 | MS.gene020134:CDS | 30.0% |
| !! | TGGTTCAATTTTTAAGAGAG+GGG | - | chr8.3:77662787-77662806 | MS.gene020134:intron | 30.0% |
| !!! | AATTTTGGCTAGATATCAGT+TGG | - | chr8.3:77663069-77663088 | MS.gene020134:CDS | 30.0% |
| !!! | ATTTTATTGAGTTGGTAGGA+CGG | - | chr8.3:77663547-77663566 | MS.gene020134:intron | 30.0% |
| !!! | TTTTTTAACATGCAGACAAG+AGG | - | chr8.3:77664264-77664283 | MS.gene020134:intron | 30.0% |
| AACATAAAGAATAAGGCCCT+TGG | + | chr8.3:77661791-77661810 | None:intergenic | 35.0% | |
| AACATGACAAAACACAGCAT+TGG | + | chr8.3:77661910-77661929 | None:intergenic | 35.0% | |
| AACTCATAAGTAAAAGCTGG+AGG | - | chr8.3:77663716-77663735 | MS.gene020134:intron | 35.0% | |
| AAGCAAAAAGTAGTCTAGGA+GGG | + | chr8.3:77662832-77662851 | None:intergenic | 35.0% | |
| ACAAATGCATGTCATATTCC+CGG | + | chr8.3:77662223-77662242 | None:intergenic | 35.0% | |
| ACAATGTAACAGAATGCTCA+CGG | + | chr8.3:77663821-77663840 | None:intergenic | 35.0% | |
| ACATGACAAAACACAGCATT+GGG | + | chr8.3:77661909-77661928 | None:intergenic | 35.0% | |
| AGTCTAGGTAGTATTCAACT+AGG | + | chr8.3:77661817-77661836 | None:intergenic | 35.0% | |
| ATATCAGTTGGCTGAATTTG+AGG | - | chr8.3:77663081-77663100 | MS.gene020134:intron | 35.0% | |
| CAACACATGAACTTTGATAC+AGG | + | chr8.3:77662142-77662161 | None:intergenic | 35.0% | |
| CACAGCTGCAATAAATTCAT+TGG | + | chr8.3:77663243-77663262 | None:intergenic | 35.0% | |
| CACTTTGCTTTCAAAAACTC+TGG | + | chr8.3:77662017-77662036 | None:intergenic | 35.0% | |
| CGAAAAATTAGGATGTGTGA+AGG | + | chr8.3:77661403-77661422 | None:intergenic | 35.0% | |
| GACTATTCCCTTCACAAATT+CGG | - | chr8.3:77663110-77663129 | MS.gene020134:intron | 35.0% | |
| GAGAACTCATAAGTAAAAGC+TGG | - | chr8.3:77663713-77663732 | MS.gene020134:intron | 35.0% | |
| TCAACCAAATGAACCCTAAA+AGG | + | chr8.3:77662726-77662745 | None:intergenic | 35.0% | |
| TCACTGAGAAACTTGATTCA+TGG | + | chr8.3:77662111-77662130 | None:intergenic | 35.0% | |
| TCCTAAACCGAATTTGTGAA+GGG | + | chr8.3:77663120-77663139 | None:intergenic | 35.0% | |
| TTCCTAAACCGAATTTGTGA+AGG | + | chr8.3:77663121-77663140 | None:intergenic | 35.0% | |
| ! | AATGCTGTGTTTTGTCATGT+TGG | - | chr8.3:77661909-77661928 | MS.gene020134:intron | 35.0% |
| ! | AGCATGTTTGGTTTAAGATG+AGG | + | chr8.3:77662924-77662943 | None:intergenic | 35.0% |
| ! | CATGTTTGGTTTAAGATGAG+GGG | + | chr8.3:77662922-77662941 | None:intergenic | 35.0% |
| ! | GCATGTTTGGTTTAAGATGA+GGG | + | chr8.3:77662923-77662942 | None:intergenic | 35.0% |
| ! | TGAGGGGAGGAATTTTTAAA+TGG | + | chr8.3:77662906-77662925 | None:intergenic | 35.0% |
| ! | TTTAAAACCACGATCCACAA+GGG | + | chr8.3:77664042-77664061 | None:intergenic | 35.0% |
| ! | TTTTGCTACGGGTGTAAAAA+TGG | + | chr8.3:77662188-77662207 | None:intergenic | 35.0% |
| ! | TTTTTGCTTCCCCTCAAATT+GGG | - | chr8.3:77662843-77662862 | MS.gene020134:intron | 35.0% |
| !! | AATTTTTAAGAGAGGGGGAT+GGG | - | chr8.3:77662793-77662812 | MS.gene020134:intron | 35.0% |
| !! | GAGGAGAAGGATTTGTTTTT+GGG | - | chr8.3:77663379-77663398 | MS.gene020134:intron | 35.0% |
| !! | GGTTCAATTTTTAAGAGAGG+GGG | - | chr8.3:77662788-77662807 | MS.gene020134:intron | 35.0% |
| !!! | AGAAGGATTTGTTTTTGGGA+AGG | - | chr8.3:77663383-77663402 | MS.gene020134:intron | 35.0% |
| !!! | AGCAGGGAATAACTTGTTTT+TGG | - | chr8.3:77663604-77663623 | MS.gene020134:intron | 35.0% |
| !!! | GTTTCCTTTTAGGGTTCATT+TGG | - | chr8.3:77662719-77662738 | MS.gene020134:intron | 35.0% |
| !!! | TTTTAAAACCACGATCCACA+AGG | + | chr8.3:77664043-77664062 | None:intergenic | 35.0% |
| AAAGAATAAGGCCCTTGGAT+TGG | + | chr8.3:77661786-77661805 | None:intergenic | 40.0% | |
| AATGAAGGGGAGGGAAATAA+AGG | - | chr8.3:77663463-77663482 | MS.gene020134:CDS | 40.0% | |
| AATTGGGTTTGGCAAGTTCA+AGG | + | chr8.3:77662351-77662370 | None:intergenic | 40.0% | |
| AGCTCAAATAAGCCAATCCA+AGG | - | chr8.3:77661771-77661790 | MS.gene020134:intron | 40.0% | |
| ATATTCACTTGGGGTCTGTT+TGG | + | chr8.3:77661472-77661491 | None:intergenic | 40.0% | |
| GAAGCAAAAAGTAGTCTAGG+AGG | + | chr8.3:77662833-77662852 | None:intergenic | 40.0% | |
| GCTCAAATAAGCCAATCCAA+GGG | - | chr8.3:77661772-77661791 | MS.gene020134:intron | 40.0% | |
| GTGGTCAATACTATCTAGCA+GGG | - | chr8.3:77663588-77663607 | MS.gene020134:intron | 40.0% | |
| TCCCTTCACAAATTCGGTTT+AGG | - | chr8.3:77663116-77663135 | MS.gene020134:intron | 40.0% | |
| TGAACCCTAAAAGGAAACAC+AGG | + | chr8.3:77662717-77662736 | None:intergenic | 40.0% | |
| TGCTATGGTTCCATCTATCA+AGG | - | chr8.3:77663305-77663324 | MS.gene020134:intron | 40.0% | |
| TGTGGTCAATACTATCTAGC+AGG | - | chr8.3:77663587-77663606 | MS.gene020134:intron | 40.0% | |
| TTCTTTCCTTGCGTTCTGTT+TGG | - | chr8.3:77661317-77661336 | MS.gene020134:intron | 40.0% | |
| ! | ATCTGGAATATATTCCGGTG+AGG | + | chr8.3:77663859-77663878 | None:intergenic | 40.0% |
| ! | CAGCATCAGGATTTTTGTAG+CGG | + | chr8.3:77662516-77662535 | None:intergenic | 40.0% |
| ! | CTTTTTGCTTCCCCTCAAAT+TGG | - | chr8.3:77662842-77662861 | MS.gene020134:intron | 40.0% |
| ! | GCTTGTTAAAATGAAGGGGA+GGG | - | chr8.3:77663454-77663473 | MS.gene020134:CDS | 40.0% |
| ! | GGATCCTGTGTTTCCTTTTA+GGG | - | chr8.3:77662710-77662729 | MS.gene020134:intron | 40.0% |
| ! | TCTGGAATATATTCCGGTGA+GGG | + | chr8.3:77663858-77663877 | None:intergenic | 40.0% |
| ! | TGCTTGTTAAAATGAAGGGG+AGG | - | chr8.3:77663453-77663472 | MS.gene020134:CDS | 40.0% |
| ! | TGGATCCTGTGTTTCCTTTT+AGG | - | chr8.3:77662709-77662728 | MS.gene020134:intron | 40.0% |
| ! | TGTAAACTTTTCCTGTTGGG+CGG | - | chr8.3:77663355-77663374 | MS.gene020134:intron | 40.0% |
| ! | TTTTGCTTCCCCTCAAATTG+GGG | - | chr8.3:77662844-77662863 | MS.gene020134:intron | 40.0% |
| !! | CAATTTTTAAGAGAGGGGGA+TGG | - | chr8.3:77662792-77662811 | MS.gene020134:intron | 40.0% |
| !! | GGAGGAGAAGGATTTGTTTT+TGG | - | chr8.3:77663378-77663397 | MS.gene020134:intron | 40.0% |
| !!! | ATCTCCGATTTTGAGTTCAG+CGG | + | chr8.3:77661241-77661260 | None:intergenic | 40.0% |
| !!! | GATTTGTTTTTGGGAAGGAG+TGG | - | chr8.3:77663388-77663407 | MS.gene020134:intron | 40.0% |
| AACGCCGCTGAACTCAAAAT+CGG | - | chr8.3:77661234-77661253 | MS.gene020134:CDS | 45.0% | |
| AGGGTTCATTTGGTTGAGAG+TGG | - | chr8.3:77662729-77662748 | MS.gene020134:intron | 45.0% | |
| ATAGCTTCCTCCACAGTTTC+CGG | + | chr8.3:77663285-77663304 | None:intergenic | 45.0% | |
| ATATTACGTAGGGGTCCGTT+TGG | + | chr8.3:77662976-77662995 | None:intergenic | 45.0% | |
| ATCCAAATCCCCCCAATTTG+AGG | + | chr8.3:77662857-77662876 | None:intergenic | 45.0% | |
| ATTTGGTTGAGAGTGGCTGA+AGG | - | chr8.3:77662736-77662755 | MS.gene020134:intron | 45.0% | |
| CGAACTTGTCTAACAGCATC+AGG | + | chr8.3:77662529-77662548 | None:intergenic | 45.0% | |
| GCTGAACTCAAAATCGGAGA+TGG | - | chr8.3:77661240-77661259 | MS.gene020134:CDS | 45.0% | |
| GGGGAAGCAAAAAGTAGTCT+AGG | + | chr8.3:77662836-77662855 | None:intergenic | 45.0% | |
| TATATTCCGGTGAGGGCAAA+TGG | + | chr8.3:77663851-77663870 | None:intergenic | 45.0% | |
| TCCAAATCCCCCCAATTTGA+GGG | + | chr8.3:77662856-77662875 | None:intergenic | 45.0% | |
| TGATTTCCTGTCTCACATGC+TGG | - | chr8.3:77664101-77664120 | MS.gene020134:intron | 45.0% | |
| TGTGGAGGAAGCTATTGCTA+TGG | - | chr8.3:77663290-77663309 | MS.gene020134:intron | 45.0% | |
| TTATTGCAGCTGTGTGTCCT+AGG | - | chr8.3:77663249-77663268 | MS.gene020134:intron | 45.0% | |
| TTCAAGCCAAACAGAACGCA+AGG | + | chr8.3:77661326-77661345 | None:intergenic | 45.0% | |
| TTTGCTTCCCCTCAAATTGG+GGG | - | chr8.3:77662845-77662864 | MS.gene020134:intron | 45.0% | |
| TTTGGTTGAGAGTGGCTGAA+GGG | - | chr8.3:77662737-77662756 | MS.gene020134:intron | 45.0% | |
| ! | CTTTTACCATTTGCCCTCAC+CGG | - | chr8.3:77663842-77663861 | MS.gene020134:intron | 45.0% |
| ! | GAAGTATTCTTGCACCCTTG+TGG | - | chr8.3:77664025-77664044 | MS.gene020134:intron | 45.0% |
| ! | GTAAACTTTTCCTGTTGGGC+GGG | - | chr8.3:77663356-77663375 | MS.gene020134:intron | 45.0% |
| ! | GTTTGGTTTAAGATGAGGGG+AGG | + | chr8.3:77662919-77662938 | None:intergenic | 45.0% |
| ! | TAAACTTTTCCTGTTGGGCG+GGG | - | chr8.3:77663357-77663376 | MS.gene020134:intron | 45.0% |
| ATTGGGGGGATTTGGATGTG+AGG | - | chr8.3:77662860-77662879 | MS.gene020134:intron | 50.0% | |
| CAATCTTTGCCCGGAAACTG+TGG | - | chr8.3:77663272-77663291 | MS.gene020134:intron | 50.0% | |
| CACTTGGGGTCTGTTTGGTA+AGG | + | chr8.3:77661467-77661486 | None:intergenic | 50.0% | |
| CCAAATCCCCCCAATTTGAG+GGG | + | chr8.3:77662855-77662874 | None:intergenic | 50.0% | |
| CTCCCCTTCGTTGAACCAAA+CGG | - | chr8.3:77662958-77662977 | MS.gene020134:intron | 50.0% | |
| TAGCTTCCTCCACAGTTTCC+GGG | + | chr8.3:77663284-77663303 | None:intergenic | 50.0% | |
| TGTCCTAGGCAATCTTTGCC+CGG | - | chr8.3:77663263-77663282 | MS.gene020134:intron | 50.0% | |
| TTGCTTCCCCTCAAATTGGG+GGG | - | chr8.3:77662846-77662865 | MS.gene020134:intron | 50.0% | |
| TTGGTTGAGAGTGGCTGAAG+GGG | - | chr8.3:77662738-77662757 | MS.gene020134:intron | 50.0% | |
| TTTAAGAGAGGGGGATGGGA+GGG | - | chr8.3:77662797-77662816 | MS.gene020134:intron | 50.0% | |
| TTTCCGGGCAAAGATTGCCT+AGG | + | chr8.3:77663269-77663288 | None:intergenic | 50.0% | |
| ! | GGTCCGTTTGGTTCAACGAA+GGG | + | chr8.3:77662964-77662983 | None:intergenic | 50.0% |
| ! | GTCCGTTTGGTTCAACGAAG+GGG | + | chr8.3:77662963-77662982 | None:intergenic | 50.0% |
| !! | TTTTAAGAGAGGGGGATGGG+AGG | - | chr8.3:77662796-77662815 | MS.gene020134:intron | 50.0% |
| !!! | GTTCATCGGCTCAGTTTTGG+AGG | + | chr8.3:77662559-77662578 | None:intergenic | 50.0% |
| !!! | TGGGTTCATCGGCTCAGTTT+TGG | + | chr8.3:77662562-77662581 | None:intergenic | 50.0% |
| CCACAACCAGCATGTGAGAC+AGG | + | chr8.3:77664110-77664129 | None:intergenic | 55.0% | |
| CCCCTCAAATTGGGGGGATT+TGG | - | chr8.3:77662852-77662871 | MS.gene020134:intron | 55.0% | |
| TCTTGCACCCTTGTGGATCG+TGG | - | chr8.3:77664032-77664051 | MS.gene020134:intron | 55.0% | |
| TCTTTGCCCGGAAACTGTGG+AGG | - | chr8.3:77663275-77663294 | MS.gene020134:intron | 55.0% | |
| TTGAGAGTGGCTGAAGGGGA+GGG | - | chr8.3:77662742-77662761 | MS.gene020134:intron | 55.0% | |
| ! | CCTGTCTCACATGCTGGTTG+TGG | - | chr8.3:77664107-77664126 | MS.gene020134:intron | 55.0% |
| ! | GGGTCCGTTTGGTTCAACGA+AGG | + | chr8.3:77662965-77662984 | None:intergenic | 55.0% |
| GCAGACAAGAGGACGTGCTC+AGG | - | chr8.3:77664275-77664294 | MS.gene020134:intron | 60.0% | |
| GTTGAGAGTGGCTGAAGGGG+AGG | - | chr8.3:77662741-77662760 | MS.gene020134:intron | 60.0% | |
| TGAGAGTGGCTGAAGGGGAG+GGG | - | chr8.3:77662743-77662762 | MS.gene020134:intron | 60.0% | |
| ! | ACTTTTCCTGTTGGGCGGGG+AGG | - | chr8.3:77663360-77663379 | MS.gene020134:intron | 60.0% |
| CCTGTTGGGCGGGGAGGAGA+AGG | - | chr8.3:77663366-77663385 | MS.gene020134:intron | 70.0% | |
| CCTTCTCCTCCCCGCCCAAC+AGG | + | chr8.3:77663369-77663388 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 77661213 | 77664356 | 77661213 | ID=MS.gene020134 |
| chr8.3 | mRNA | 77661213 | 77664356 | 77661213 | ID=MS.gene020134.t1;Parent=MS.gene020134 |
| chr8.3 | exon | 77664308 | 77664356 | 77664308 | ID=MS.gene020134.t1.exon1;Parent=MS.gene020134.t1 |
| chr8.3 | CDS | 77664308 | 77664356 | 77664308 | ID=cds.MS.gene020134.t1;Parent=MS.gene020134.t1 |
| chr8.3 | exon | 77663443 | 77663551 | 77663443 | ID=MS.gene020134.t1.exon2;Parent=MS.gene020134.t1 |
| chr8.3 | CDS | 77663443 | 77663551 | 77663443 | ID=cds.MS.gene020134.t1;Parent=MS.gene020134.t1 |
| chr8.3 | exon | 77663018 | 77663095 | 77663018 | ID=MS.gene020134.t1.exon3;Parent=MS.gene020134.t1 |
| chr8.3 | CDS | 77663018 | 77663095 | 77663018 | ID=cds.MS.gene020134.t1;Parent=MS.gene020134.t1 |
| chr8.3 | exon | 77662467 | 77662500 | 77662467 | ID=MS.gene020134.t1.exon4;Parent=MS.gene020134.t1 |
| chr8.3 | CDS | 77662467 | 77662500 | 77662467 | ID=cds.MS.gene020134.t1;Parent=MS.gene020134.t1 |
| chr8.3 | exon | 77662243 | 77662311 | 77662243 | ID=MS.gene020134.t1.exon5;Parent=MS.gene020134.t1 |
| chr8.3 | CDS | 77662243 | 77662311 | 77662243 | ID=cds.MS.gene020134.t1;Parent=MS.gene020134.t1 |
| chr8.3 | exon | 77661213 | 77661290 | 77661213 | ID=MS.gene020134.t1.exon6;Parent=MS.gene020134.t1 |
| chr8.3 | CDS | 77661213 | 77661290 | 77661213 | ID=cds.MS.gene020134.t1;Parent=MS.gene020134.t1 |
| Gene Sequence |
| Protein sequence |
