Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021976.t1 | KEH21742.1 | 99 | 307 | 3 | 0 | 1 | 307 | 1 | 307 | 5.80E-167 | 597.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021976.t1 | Q8BGF9 | 36.5 | 312 | 161 | 8 | 10 | 306 | 10 | 299 | 6.1e-40 | 166.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021976.t1 | A0A072TWB7 | 99.0 | 307 | 3 | 0 | 1 | 307 | 1 | 307 | 4.2e-167 | 597.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene32779 | MS.gene021976 | PPI |
MS.gene030057 | MS.gene021976 | PPI |
MS.gene021976 | MS.gene37400 | PPI |
MS.gene014991 | MS.gene021976 | PPI |
MS.gene017129 | MS.gene021976 | PPI |
MS.gene038363 | MS.gene021976 | PPI |
MS.gene021976 | MS.gene07262 | PPI |
MS.gene42695 | MS.gene021976 | PPI |
MS.gene062351 | MS.gene021976 | PPI |
MS.gene20783 | MS.gene021976 | PPI |
MS.gene021976 | MS.gene20834 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021976.t1 | MTR_7g015870 | 99.023 | 307 | 3 | 0 | 1 | 307 | 1 | 307 | 0.0 | 612 |
MS.gene021976.t1 | MTR_7g015870 | 98.305 | 295 | 5 | 0 | 12 | 306 | 16 | 310 | 0.0 | 584 |
MS.gene021976.t1 | MTR_6g015860 | 78.523 | 298 | 64 | 0 | 9 | 306 | 5 | 302 | 2.74e-174 | 493 |
MS.gene021976.t1 | MTR_7g015860 | 91.975 | 162 | 13 | 0 | 327 | 488 | 304 | 465 | 9.87e-105 | 320 |
MS.gene021976.t1 | MTR_2g032610 | 50.163 | 307 | 148 | 3 | 4 | 307 | 12 | 316 | 1.85e-104 | 315 |
MS.gene021976.t1 | MTR_8g019480 | 46.440 | 323 | 145 | 4 | 9 | 306 | 21 | 340 | 1.87e-84 | 265 |
MS.gene021976.t1 | MTR_3g104810 | 40.303 | 330 | 169 | 5 | 9 | 313 | 20 | 346 | 2.31e-71 | 230 |
MS.gene021976.t1 | MTR_5g073040 | 30.363 | 303 | 175 | 9 | 13 | 304 | 31 | 308 | 2.25e-27 | 112 |
MS.gene021976.t1 | MTR_5g073040 | 26.396 | 197 | 134 | 6 | 21 | 211 | 129 | 320 | 1.92e-11 | 65.5 |
MS.gene021976.t1 | MTR_1g097890 | 32.463 | 268 | 139 | 10 | 25 | 288 | 53 | 282 | 1.83e-25 | 106 |
MS.gene021976.t1 | MTR_2g089765 | 41.772 | 158 | 81 | 5 | 340 | 486 | 328 | 485 | 1.28e-23 | 103 |
MS.gene021976.t1 | MTR_8g092080 | 31.023 | 303 | 166 | 11 | 1 | 297 | 27 | 292 | 2.59e-23 | 100 |
MS.gene021976.t1 | MTR_8g098240 | 27.797 | 295 | 185 | 7 | 15 | 306 | 314 | 583 | 2.76e-23 | 103 |
MS.gene021976.t1 | MTR_6g034515 | 27.106 | 273 | 160 | 9 | 35 | 295 | 81 | 326 | 3.04e-23 | 101 |
MS.gene021976.t1 | MTR_6g034515 | 28.736 | 174 | 109 | 4 | 35 | 202 | 174 | 338 | 4.25e-13 | 70.9 |
MS.gene021976.t1 | MTR_2g089755 | 37.059 | 170 | 91 | 5 | 324 | 484 | 314 | 476 | 6.03e-23 | 102 |
MS.gene021976.t1 | MTR_2g089670 | 39.877 | 163 | 88 | 2 | 334 | 486 | 318 | 480 | 3.40e-21 | 96.7 |
MS.gene021976.t1 | MTR_2g089650 | 34.375 | 160 | 92 | 4 | 330 | 480 | 305 | 460 | 3.48e-20 | 93.6 |
MS.gene021976.t1 | MTR_2g089735 | 36.667 | 150 | 84 | 3 | 344 | 484 | 315 | 462 | 3.88e-20 | 93.2 |
MS.gene021976.t1 | MTR_7g014230 | 36.986 | 146 | 80 | 3 | 345 | 479 | 310 | 454 | 5.00e-20 | 92.8 |
MS.gene021976.t1 | MTR_7g014330 | 37.063 | 143 | 78 | 3 | 348 | 479 | 311 | 452 | 3.04e-19 | 90.5 |
MS.gene021976.t1 | MTR_1g012030 | 26.316 | 285 | 184 | 7 | 25 | 304 | 141 | 404 | 3.92e-19 | 89.7 |
MS.gene021976.t1 | MTR_1g012030 | 27.174 | 184 | 119 | 7 | 123 | 306 | 140 | 308 | 6.86e-12 | 67.8 |
MS.gene021976.t1 | MTR_1g012030 | 27.225 | 191 | 118 | 5 | 22 | 205 | 234 | 410 | 9.69e-11 | 63.9 |
MS.gene021976.t1 | MTR_7g014360 | 33.136 | 169 | 100 | 4 | 323 | 479 | 215 | 382 | 1.85e-18 | 87.4 |
MS.gene021976.t1 | MTR_4g088545 | 26.977 | 215 | 139 | 5 | 111 | 317 | 1 | 205 | 1.87e-18 | 85.9 |
MS.gene021976.t1 | MTR_4g088545 | 26.977 | 215 | 139 | 5 | 111 | 317 | 1 | 205 | 2.33e-18 | 84.7 |
MS.gene021976.t1 | MTR_4g088545 | 26.977 | 215 | 139 | 5 | 111 | 317 | 1 | 205 | 1.09e-17 | 84.0 |
MS.gene021976.t1 | MTR_4g088545 | 26.000 | 300 | 183 | 12 | 25 | 304 | 14 | 294 | 1.19e-12 | 68.9 |
MS.gene021976.t1 | MTR_3g107510 | 24.684 | 316 | 190 | 9 | 25 | 335 | 128 | 400 | 1.22e-17 | 85.1 |
MS.gene021976.t1 | MTR_3g107510 | 26.776 | 183 | 119 | 6 | 124 | 306 | 124 | 291 | 3.08e-12 | 68.6 |
MS.gene021976.t1 | MTR_8g012750 | 36.364 | 165 | 92 | 4 | 337 | 488 | 313 | 477 | 1.76e-17 | 85.1 |
MS.gene021976.t1 | MTR_7g014250 | 34.965 | 143 | 81 | 3 | 348 | 479 | 311 | 452 | 5.68e-17 | 83.6 |
MS.gene021976.t1 | MTR_7g014310 | 38.462 | 130 | 68 | 3 | 348 | 466 | 178 | 306 | 6.91e-17 | 81.6 |
MS.gene021976.t1 | MTR_1g095780 | 26.316 | 285 | 177 | 9 | 22 | 304 | 525 | 778 | 1.10e-16 | 83.6 |
MS.gene021976.t1 | MTR_4g114320 | 24.194 | 310 | 191 | 9 | 25 | 331 | 129 | 397 | 1.70e-16 | 81.6 |
MS.gene021976.t1 | MTR_4g114320 | 25.000 | 184 | 124 | 6 | 123 | 306 | 124 | 293 | 2.29e-12 | 68.9 |
MS.gene021976.t1 | MTR_6g015815 | 33.987 | 153 | 91 | 2 | 344 | 486 | 311 | 463 | 2.32e-16 | 81.6 |
MS.gene021976.t1 | MTR_3g087640 | 33.333 | 150 | 89 | 4 | 344 | 484 | 326 | 473 | 4.87e-16 | 80.9 |
MS.gene021976.t1 | MTR_6g015850 | 32.237 | 152 | 94 | 2 | 344 | 486 | 309 | 460 | 2.41e-15 | 78.6 |
MS.gene021976.t1 | MTR_7g084400 | 25.606 | 289 | 189 | 10 | 21 | 304 | 212 | 479 | 4.11e-15 | 78.2 |
MS.gene021976.t1 | MTR_7g084400 | 28.235 | 170 | 112 | 3 | 35 | 203 | 323 | 483 | 2.31e-12 | 69.3 |
MS.gene021976.t1 | MTR_6g015830 | 32.432 | 148 | 91 | 2 | 348 | 486 | 316 | 463 | 4.36e-15 | 77.8 |
MS.gene021976.t1 | MTR_3g028210 | 33.121 | 157 | 96 | 3 | 339 | 486 | 311 | 467 | 5.50e-15 | 77.4 |
MS.gene021976.t1 | MTR_7g014210 | 39.130 | 115 | 58 | 3 | 351 | 453 | 24 | 138 | 8.01e-15 | 72.8 |
MS.gene021976.t1 | MTR_7g109135 | 30.000 | 180 | 103 | 5 | 37 | 205 | 40 | 207 | 9.32e-15 | 73.9 |
MS.gene021976.t1 | MTR_4g018750 | 24.731 | 279 | 189 | 7 | 33 | 304 | 27 | 291 | 1.02e-14 | 75.1 |
MS.gene021976.t1 | MTR_2g102010 | 25.267 | 281 | 181 | 10 | 25 | 294 | 19 | 281 | 1.15e-14 | 75.1 |
MS.gene021976.t1 | MTR_7g066690 | 26.182 | 275 | 182 | 7 | 37 | 304 | 33 | 293 | 1.43e-14 | 74.7 |
MS.gene021976.t1 | MTR_7g014670 | 35.714 | 140 | 78 | 4 | 344 | 472 | 109 | 247 | 1.61e-14 | 73.9 |
MS.gene021976.t1 | MTR_7g109135 | 30.000 | 180 | 103 | 5 | 37 | 205 | 61 | 228 | 1.71e-14 | 73.6 |
MS.gene021976.t1 | MTR_7g014205 | 36.441 | 118 | 53 | 3 | 345 | 451 | 14 | 120 | 2.54e-14 | 69.7 |
MS.gene021976.t1 | MTR_6g091800 | 27.727 | 220 | 129 | 5 | 119 | 324 | 20 | 223 | 6.33e-14 | 72.4 |
MS.gene021976.t1 | MTR_7g109135 | 30.000 | 180 | 103 | 5 | 37 | 205 | 139 | 306 | 8.81e-14 | 72.8 |
MS.gene021976.t1 | MTR_7g109135 | 23.567 | 314 | 199 | 13 | 17 | 309 | 16 | 309 | 3.98e-12 | 67.8 |
MS.gene021976.t1 | MTR_8g027975 | 27.320 | 194 | 122 | 5 | 23 | 198 | 154 | 346 | 9.77e-14 | 72.8 |
MS.gene021976.t1 | MTR_8g027975 | 23.973 | 292 | 184 | 6 | 22 | 287 | 51 | 330 | 6.32e-13 | 70.5 |
MS.gene021976.t1 | MTR_6g091800 | 27.727 | 220 | 129 | 5 | 119 | 324 | 20 | 223 | 1.09e-13 | 72.4 |
MS.gene021976.t1 | MTR_6g091800 | 27.727 | 220 | 129 | 5 | 119 | 324 | 20 | 223 | 1.51e-13 | 71.2 |
MS.gene021976.t1 | MTR_7g014610 | 31.613 | 155 | 80 | 3 | 344 | 479 | 324 | 471 | 1.73e-13 | 72.8 |
MS.gene021976.t1 | MTR_4g012850 | 24.354 | 271 | 176 | 11 | 25 | 286 | 18 | 268 | 2.34e-13 | 71.2 |
MS.gene021976.t1 | MTR_3g025800 | 25.685 | 292 | 155 | 10 | 35 | 288 | 42 | 309 | 3.03e-13 | 71.2 |
MS.gene021976.t1 | MTR_5g055410 | 25.773 | 291 | 188 | 11 | 37 | 316 | 37 | 310 | 3.44e-13 | 71.2 |
MS.gene021976.t1 | MTR_5g055410 | 27.551 | 196 | 122 | 5 | 37 | 224 | 135 | 318 | 6.94e-12 | 67.4 |
MS.gene021976.t1 | MTR_5g009500 | 24.917 | 301 | 202 | 8 | 22 | 304 | 38 | 332 | 4.11e-13 | 70.9 |
MS.gene021976.t1 | MTR_7g064980 | 24.206 | 252 | 171 | 6 | 61 | 306 | 73 | 310 | 4.39e-13 | 70.5 |
MS.gene021976.t1 | MTR_7g014160 | 32.667 | 150 | 89 | 3 | 344 | 482 | 323 | 471 | 6.44e-13 | 71.2 |
MS.gene021976.t1 | MTR_5g030530 | 26.923 | 286 | 174 | 11 | 36 | 304 | 23 | 290 | 6.89e-13 | 69.7 |
MS.gene021976.t1 | MTR_6g015315 | 30.822 | 146 | 91 | 2 | 344 | 479 | 303 | 448 | 8.20e-13 | 70.9 |
MS.gene021976.t1 | MTR_2g436930 | 23.667 | 300 | 185 | 8 | 37 | 304 | 31 | 318 | 1.01e-12 | 69.7 |
MS.gene021976.t1 | MTR_1g087840 | 28.249 | 177 | 116 | 3 | 37 | 208 | 136 | 306 | 1.04e-12 | 69.3 |
MS.gene021976.t1 | MTR_8g096050 | 26.163 | 172 | 122 | 2 | 33 | 203 | 333 | 500 | 1.41e-12 | 70.1 |
MS.gene021976.t1 | MTR_8g096050 | 23.588 | 301 | 194 | 10 | 17 | 306 | 223 | 498 | 2.09e-12 | 69.7 |
MS.gene021976.t1 | MTR_8g096050 | 28.125 | 224 | 136 | 9 | 108 | 325 | 214 | 418 | 4.45e-12 | 68.6 |
MS.gene021976.t1 | MTR_8g066975 | 27.875 | 287 | 170 | 13 | 36 | 304 | 23 | 290 | 2.18e-12 | 68.2 |
MS.gene021976.t1 | MTR_7g014200 | 30.000 | 170 | 102 | 5 | 323 | 479 | 299 | 464 | 5.93e-12 | 68.2 |
MS.gene021976.t1 | MTR_8g076760 | 26.298 | 289 | 177 | 12 | 35 | 304 | 28 | 299 | 7.24e-12 | 66.6 |
MS.gene021976.t1 | MTR_7g084400 | 28.431 | 204 | 125 | 7 | 108 | 306 | 194 | 381 | 8.99e-12 | 67.4 |
MS.gene021976.t1 | MTR_6g092210 | 28.571 | 168 | 102 | 3 | 165 | 324 | 6 | 163 | 9.20e-12 | 65.9 |
MS.gene021976.t1 | MTR_6g015320 | 29.252 | 147 | 91 | 1 | 346 | 479 | 304 | 450 | 1.17e-11 | 67.0 |
MS.gene021976.t1 | MTR_7g109135 | 28.025 | 157 | 97 | 3 | 55 | 205 | 153 | 299 | 1.71e-11 | 65.5 |
MS.gene021976.t1 | MTR_4g005330 | 27.326 | 172 | 107 | 4 | 32 | 198 | 188 | 346 | 2.17e-11 | 65.9 |
MS.gene021976.t1 | MTR_1g090330 | 22.867 | 293 | 172 | 10 | 36 | 304 | 29 | 291 | 2.20e-11 | 65.1 |
MS.gene021976.t1 | MTR_6g034145 | 28.161 | 174 | 101 | 3 | 165 | 324 | 6 | 169 | 2.44e-11 | 64.7 |
MS.gene021976.t1 | MTR_4g005330 | 27.326 | 172 | 107 | 4 | 32 | 198 | 122 | 280 | 2.73e-11 | 64.7 |
MS.gene021976.t1 | MTR_3g104600 | 29.798 | 198 | 107 | 7 | 25 | 198 | 133 | 322 | 3.74e-11 | 65.1 |
MS.gene021976.t1 | MTR_3g104600 | 27.854 | 219 | 116 | 6 | 123 | 319 | 36 | 234 | 7.63e-11 | 63.9 |
MS.gene021976.t1 | MTR_3g462140 | 23.810 | 294 | 166 | 10 | 37 | 304 | 31 | 292 | 3.79e-11 | 64.3 |
MS.gene021976.t1 | MTR_2g089745 | 42.857 | 77 | 42 | 1 | 410 | 486 | 6 | 80 | 5.43e-11 | 59.3 |
MS.gene021976.t1 | MTR_4g057850 | 24.731 | 279 | 182 | 10 | 25 | 292 | 24 | 285 | 7.88e-11 | 63.5 |
MS.gene021976.t1 | MTR_7g014620 | 31.325 | 166 | 99 | 3 | 323 | 476 | 263 | 425 | 9.95e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021976.t1 | AT5G15640 | 79.016 | 305 | 62 | 2 | 4 | 306 | 11 | 315 | 1.58e-173 | 491 |
MS.gene021976.t1 | AT5G15640 | 77.592 | 299 | 64 | 3 | 10 | 306 | 11 | 308 | 1.42e-164 | 468 |
MS.gene021976.t1 | AT1G72820 | 45.312 | 320 | 149 | 5 | 9 | 306 | 19 | 334 | 1.15e-86 | 270 |
MS.gene021976.t1 | AT1G72820 | 45.312 | 320 | 149 | 5 | 9 | 306 | 19 | 334 | 1.15e-86 | 270 |
MS.gene021976.t1 | AT5G26200 | 44.514 | 319 | 154 | 6 | 9 | 311 | 27 | 338 | 3.00e-82 | 258 |
MS.gene021976.t1 | AT1G07030 | 28.846 | 312 | 181 | 9 | 7 | 304 | 26 | 310 | 6.04e-27 | 111 |
MS.gene021976.t1 | AT2G30160 | 31.449 | 283 | 162 | 10 | 33 | 304 | 54 | 315 | 3.63e-26 | 109 |
MS.gene021976.t1 | AT2G30160 | 25.926 | 189 | 133 | 4 | 25 | 208 | 138 | 324 | 6.41e-11 | 64.3 |
MS.gene021976.t1 | AT1G34065 | 31.716 | 268 | 145 | 10 | 31 | 297 | 85 | 315 | 4.97e-24 | 103 |
MS.gene021976.t1 | AT1G34065 | 31.716 | 268 | 145 | 10 | 31 | 297 | 92 | 322 | 5.52e-24 | 103 |
MS.gene021976.t1 | AT4G39460 | 32.258 | 279 | 143 | 11 | 25 | 297 | 60 | 298 | 1.00e-21 | 96.3 |
MS.gene021976.t1 | AT4G39460 | 32.258 | 279 | 143 | 11 | 25 | 297 | 60 | 298 | 1.00e-21 | 96.3 |
MS.gene021976.t1 | AT4G39460 | 32.258 | 279 | 143 | 11 | 25 | 297 | 60 | 298 | 1.00e-21 | 96.3 |
MS.gene021976.t1 | AT5G42130 | 28.472 | 288 | 168 | 10 | 12 | 288 | 111 | 371 | 2.49e-21 | 96.7 |
MS.gene021976.t1 | AT4G11440 | 26.573 | 286 | 186 | 10 | 25 | 305 | 332 | 598 | 3.23e-20 | 94.4 |
MS.gene021976.t1 | AT4G11440 | 26.573 | 286 | 186 | 10 | 25 | 305 | 332 | 598 | 3.23e-20 | 94.4 |
MS.gene021976.t1 | AT2G37890 | 30.412 | 194 | 111 | 7 | 119 | 306 | 153 | 328 | 1.65e-17 | 84.0 |
MS.gene021976.t1 | AT2G37890 | 28.061 | 196 | 119 | 7 | 25 | 210 | 154 | 337 | 6.27e-12 | 67.4 |
MS.gene021976.t1 | AT2G35800 | 24.735 | 283 | 183 | 7 | 23 | 304 | 546 | 799 | 6.99e-17 | 84.3 |
MS.gene021976.t1 | AT1G03940 | 29.091 | 165 | 101 | 3 | 330 | 480 | 299 | 461 | 1.36e-16 | 82.4 |
MS.gene021976.t1 | AT4G32400 | 25.402 | 311 | 188 | 9 | 25 | 332 | 120 | 389 | 6.82e-16 | 79.7 |
MS.gene021976.t1 | AT5G46800 | 28.082 | 292 | 166 | 11 | 36 | 304 | 23 | 293 | 8.29e-16 | 78.6 |
MS.gene021976.t1 | AT5G46800 | 30.348 | 201 | 113 | 9 | 15 | 198 | 102 | 292 | 5.26e-11 | 63.9 |
MS.gene021976.t1 | AT5G46800 | 28.082 | 292 | 166 | 11 | 36 | 304 | 23 | 293 | 8.29e-16 | 78.6 |
MS.gene021976.t1 | AT5G46800 | 30.348 | 201 | 113 | 9 | 15 | 198 | 102 | 292 | 5.26e-11 | 63.9 |
MS.gene021976.t1 | AT5G46800 | 28.082 | 292 | 166 | 11 | 36 | 304 | 23 | 293 | 8.29e-16 | 78.6 |
MS.gene021976.t1 | AT5G46800 | 30.348 | 201 | 113 | 9 | 15 | 198 | 102 | 292 | 5.26e-11 | 63.9 |
MS.gene021976.t1 | AT3G54110 | 26.259 | 278 | 186 | 6 | 33 | 304 | 27 | 291 | 2.04e-15 | 77.4 |
MS.gene021976.t1 | AT3G55640 | 31.606 | 193 | 110 | 6 | 119 | 306 | 146 | 321 | 3.81e-15 | 77.0 |
MS.gene021976.t1 | AT3G55640 | 31.056 | 161 | 99 | 6 | 25 | 180 | 147 | 300 | 1.20e-11 | 66.2 |
MS.gene021976.t1 | AT3G55640 | 31.606 | 193 | 110 | 6 | 119 | 306 | 146 | 321 | 3.81e-15 | 77.0 |
MS.gene021976.t1 | AT3G55640 | 31.056 | 161 | 99 | 6 | 25 | 180 | 147 | 300 | 1.20e-11 | 66.2 |
MS.gene021976.t1 | AT2G26360 | 23.549 | 293 | 187 | 7 | 21 | 306 | 110 | 372 | 8.76e-15 | 76.6 |
MS.gene021976.t1 | AT1G14140 | 25.177 | 282 | 180 | 9 | 36 | 304 | 31 | 294 | 9.40e-15 | 75.5 |
MS.gene021976.t1 | AT1G79900 | 26.667 | 255 | 157 | 11 | 36 | 286 | 31 | 259 | 1.21e-14 | 75.1 |
MS.gene021976.t1 | AT5G01340 | 26.855 | 283 | 172 | 10 | 25 | 292 | 19 | 281 | 2.00e-14 | 74.3 |
MS.gene021976.t1 | AT2G33820 | 28.079 | 203 | 120 | 5 | 123 | 313 | 19 | 207 | 2.48e-14 | 73.6 |
MS.gene021976.t1 | AT4G01100 | 25.385 | 260 | 172 | 4 | 62 | 304 | 34 | 288 | 2.64e-14 | 73.9 |
MS.gene021976.t1 | AT4G01100 | 27.778 | 162 | 105 | 4 | 131 | 287 | 1 | 155 | 4.07e-11 | 64.3 |
MS.gene021976.t1 | AT5G61810 | 25.795 | 283 | 168 | 9 | 34 | 306 | 221 | 471 | 3.63e-14 | 75.1 |
MS.gene021976.t1 | AT5G61810 | 28.571 | 203 | 120 | 7 | 108 | 306 | 195 | 376 | 9.81e-12 | 67.4 |
MS.gene021976.t1 | AT4G01100 | 25.385 | 260 | 172 | 4 | 62 | 304 | 84 | 338 | 3.97e-14 | 73.9 |
MS.gene021976.t1 | AT4G01100 | 27.717 | 184 | 117 | 5 | 109 | 287 | 33 | 205 | 5.42e-12 | 67.8 |
MS.gene021976.t1 | AT5G61810 | 26.224 | 286 | 163 | 10 | 34 | 306 | 78 | 328 | 5.02e-14 | 73.6 |
MS.gene021976.t1 | AT5G61810 | 28.571 | 203 | 120 | 7 | 108 | 306 | 52 | 233 | 9.74e-12 | 66.6 |
MS.gene021976.t1 | AT2G33820 | 28.141 | 199 | 117 | 5 | 123 | 309 | 19 | 203 | 8.31e-14 | 72.8 |
MS.gene021976.t1 | AT3G53940 | 29.534 | 193 | 114 | 6 | 119 | 306 | 181 | 356 | 9.09e-14 | 73.2 |
MS.gene021976.t1 | AT4G26180 | 25.630 | 238 | 140 | 5 | 66 | 285 | 66 | 284 | 1.11e-13 | 72.0 |
MS.gene021976.t1 | AT4G26180 | 25.339 | 221 | 132 | 6 | 123 | 328 | 22 | 224 | 7.53e-12 | 66.6 |
MS.gene021976.t1 | AT4G26180 | 25.630 | 238 | 140 | 5 | 66 | 285 | 66 | 284 | 1.28e-13 | 72.4 |
MS.gene021976.t1 | AT4G26180 | 25.339 | 221 | 132 | 6 | 123 | 328 | 22 | 224 | 8.49e-12 | 67.0 |
MS.gene021976.t1 | AT5G07320 | 23.488 | 281 | 183 | 8 | 34 | 309 | 222 | 475 | 1.03e-12 | 70.5 |
MS.gene021976.t1 | AT5G39050 | 28.947 | 152 | 98 | 3 | 344 | 485 | 318 | 469 | 1.31e-12 | 70.1 |
MS.gene021976.t1 | AT3G20240 | 28.652 | 178 | 117 | 5 | 22 | 198 | 164 | 332 | 1.46e-12 | 69.3 |
MS.gene021976.t1 | AT3G20240 | 26.335 | 281 | 165 | 10 | 25 | 286 | 58 | 315 | 4.92e-12 | 67.8 |
MS.gene021976.t1 | AT4G01100 | 25.182 | 274 | 169 | 7 | 62 | 304 | 84 | 352 | 2.81e-12 | 68.6 |
MS.gene021976.t1 | AT1G74240 | 24.919 | 309 | 180 | 11 | 14 | 288 | 24 | 314 | 4.21e-12 | 68.2 |
MS.gene021976.t1 | AT3G29670 | 29.710 | 138 | 86 | 4 | 346 | 472 | 301 | 438 | 4.31e-12 | 68.6 |
MS.gene021976.t1 | AT2G47490 | 26.630 | 184 | 112 | 5 | 33 | 205 | 129 | 300 | 6.44e-12 | 67.0 |
MS.gene021976.t1 | AT2G47490 | 23.390 | 295 | 197 | 9 | 37 | 320 | 33 | 309 | 7.84e-11 | 63.5 |
MS.gene021976.t1 | AT4G03115 | 25.258 | 194 | 107 | 5 | 122 | 304 | 39 | 205 | 9.73e-12 | 65.1 |
MS.gene021976.t1 | AT1G74240 | 25.088 | 283 | 165 | 10 | 35 | 288 | 2 | 266 | 1.01e-11 | 66.6 |
MS.gene021976.t1 | AT1G25380 | 24.468 | 282 | 185 | 9 | 37 | 306 | 37 | 302 | 1.46e-11 | 66.2 |
MS.gene021976.t1 | AT1G25380 | 24.468 | 282 | 185 | 9 | 37 | 306 | 37 | 302 | 1.46e-11 | 66.2 |
MS.gene021976.t1 | AT4G03115 | 25.258 | 194 | 107 | 5 | 122 | 304 | 39 | 205 | 1.51e-11 | 64.7 |
MS.gene021976.t1 | AT4G03115 | 25.258 | 194 | 107 | 5 | 122 | 304 | 71 | 237 | 2.06e-11 | 65.9 |
MS.gene021976.t1 | AT2G33820 | 27.053 | 207 | 117 | 6 | 123 | 309 | 19 | 211 | 2.07e-11 | 65.5 |
MS.gene021976.t1 | AT4G03115 | 25.258 | 194 | 107 | 5 | 122 | 304 | 39 | 205 | 2.84e-11 | 65.1 |
MS.gene021976.t1 | AT3G29680 | 30.070 | 143 | 89 | 3 | 344 | 475 | 297 | 439 | 3.67e-11 | 65.5 |
MS.gene021976.t1 | AT5G61160 | 28.082 | 146 | 88 | 5 | 344 | 475 | 300 | 442 | 5.29e-11 | 65.1 |
MS.gene021976.t1 | AT5G56450 | 26.768 | 198 | 115 | 6 | 21 | 205 | 145 | 325 | 5.71e-11 | 64.3 |
MS.gene021976.t1 | AT1G14560 | 26.570 | 207 | 119 | 4 | 133 | 323 | 38 | 227 | 8.56e-11 | 63.5 |
Find 106 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAATTCCTTCCACATATTT+TGG | 0.114981 | 7.1:+80480078 | MS.gene021976:CDS |
TTGGACAAACCGAGATTAAT+TGG | 0.150587 | 7.1:+80465647 | MS.gene021976:CDS |
TTGAATATGATTCGTGTTAT+AGG | 0.201299 | 7.1:+80480243 | MS.gene021976:CDS |
TTTGAAGACATTCATTGTTT+TGG | 0.232254 | 7.1:+80480021 | MS.gene021976:CDS |
AATCAAATGGCCCAATCTTT+TGG | 0.239722 | 7.1:+80465628 | None:intergenic |
TGTGAAGCAGCAAATGTTAT+TGG | 0.265843 | 7.1:+80480165 | MS.gene021976:CDS |
ATCCTTGCACCATCAACTTT+TGG | 0.297922 | 7.1:-80467931 | None:intergenic |
AGGAAGTTATTGGGAGAAAA+TGG | 0.302018 | 7.1:+80480138 | MS.gene021976:CDS |
TACTATCAAGACACGGTTAC+AGG | 0.314188 | 7.1:+80469268 | MS.gene021976:CDS |
TTTAAAATGTTGCAACCATT+TGG | 0.318670 | 7.1:+80467125 | MS.gene021976:CDS |
TGGCATCCCTGGTTTGTATA+GGG | 0.327783 | 7.1:+80467022 | MS.gene021976:CDS |
ACTACCAAAGAGGAAGTTAT+TGG | 0.342580 | 7.1:+80480128 | MS.gene021976:CDS |
TTTAAGGTCTGATGGCATTC+GGG | 0.346786 | 7.1:+80468003 | MS.gene021976:CDS |
TCTCGGTTTGTCCAAAAGAT+TGG | 0.349521 | 7.1:-80465639 | None:intergenic |
ATGGCATCCCTGGTTTGTAT+AGG | 0.351928 | 7.1:+80467021 | MS.gene021976:CDS |
GTTCAAGCCAACGCTTCATT+TGG | 0.354303 | 7.1:+80468098 | MS.gene021976:CDS |
TCTCCCAATAACTTCCTCTT+TGG | 0.357035 | 7.1:-80480132 | None:intergenic |
GTTGGAGCTGGACTCTTTAC+CGG | 0.357631 | 7.1:+80466885 | MS.gene021976:CDS |
CGGGGATTGTATCGAGGGTT+TGG | 0.369203 | 7.1:+80468022 | MS.gene021976:CDS |
GCATTAGCAAATGGAGTTGC+AGG | 0.372561 | 7.1:+80467170 | MS.gene021976:CDS |
CTTTAGCACATCATCCTACT+TGG | 0.374122 | 7.1:+80474188 | MS.gene021976:intron |
GGGTTTGGTACGGTTATCTT+TGG | 0.378034 | 7.1:+80467044 | MS.gene021976:CDS |
AACCGAGAGGAATATGATTC+TGG | 0.387895 | 7.1:-80467078 | None:intergenic |
GCCGAAGATTATGTTAGTTC+AGG | 0.400448 | 7.1:+80469190 | MS.gene021976:CDS |
TTGATAACATCGGTCAAAAC+AGG | 0.404793 | 7.1:-80480312 | None:intergenic |
CTTCATCATATTTGCCACCT+TGG | 0.412479 | 7.1:-80469154 | None:intergenic |
TCAGGTTAGCCAAAAGTTGA+TGG | 0.423679 | 7.1:+80467922 | MS.gene021976:intron |
CGGTTTCAGTTGTGAAAACT+AGG | 0.425464 | 7.1:+80466928 | MS.gene021976:CDS |
CTCGGTTTGTCCAAAAGATT+GGG | 0.429920 | 7.1:-80465638 | None:intergenic |
TATGAAACTGACTTTGGATT+GGG | 0.432160 | 7.1:+80480285 | MS.gene021976:CDS |
AAAGGTCTATATAGAGGGTT+TGG | 0.434982 | 7.1:+80470900 | MS.gene021976:CDS |
GCCCACCACACTGCGCTAGA+AGG | 0.441035 | 7.1:-80468067 | None:intergenic |
ACTTAGAGACATTGTAATGT+AGG | 0.442562 | 7.1:+80480455 | MS.gene021976:CDS |
TGTTTGCATTGACAGACTCT+TGG | 0.443008 | 7.1:+80469130 | MS.gene021976:intron |
TGGACAAACCGAGATTAATT+GGG | 0.443853 | 7.1:+80465648 | MS.gene021976:CDS |
TCAGGACATGCCCAATATAG+TGG | 0.455225 | 7.1:+80467956 | MS.gene021976:CDS |
CACCTTCTAGCGCAGTGTGG+TGG | 0.464939 | 7.1:+80468065 | MS.gene021976:CDS |
AAGTTCTATGTCGTTGGAGC+TGG | 0.466146 | 7.1:+80466873 | MS.gene021976:CDS |
ACCTTCTAGCGCAGTGTGGT+GGG | 0.467978 | 7.1:+80468066 | MS.gene021976:CDS |
GCTGCGGGAGGAATTATTGC+TGG | 0.469707 | 7.1:+80469212 | MS.gene021976:CDS |
GCATCCCTGGTTTGTATAGG+GGG | 0.471756 | 7.1:+80467024 | MS.gene021976:CDS |
GTTTCATACACATCAAACTT+TGG | 0.471900 | 7.1:-80480270 | None:intergenic |
TGGACTCTTTACCGGTGTTA+CGG | 0.472621 | 7.1:+80466893 | MS.gene021976:CDS |
ATCCAATGGTGTCGTAATGC+AGG | 0.478173 | 7.1:-80469246 | None:intergenic |
AAAGATTTAATCAAAGAAGA+TGG | 0.480207 | 7.1:+80470873 | MS.gene021976:CDS |
CTACCAAAGAGGAAGTTATT+GGG | 0.483522 | 7.1:+80480129 | MS.gene021976:CDS |
ACTGGTCCGGAGTGAAAGCT+TGG | 0.483887 | 7.1:-80474220 | None:intergenic |
AGTTGTGAAAACTAGGCTGC+AGG | 0.487980 | 7.1:+80466935 | MS.gene021976:CDS |
CAAGCCAACGCTTCATTTGG+AGG | 0.488009 | 7.1:+80468101 | MS.gene021976:CDS |
GTAGTTTCAGATAGTCCAAA+TGG | 0.488878 | 7.1:-80467140 | None:intergenic |
GGTTGGAAAGGTCTATATAG+AGG | 0.491401 | 7.1:+80470894 | MS.gene021976:CDS |
ATTTAATCAAAGAAGATGGT+TGG | 0.493767 | 7.1:+80470877 | MS.gene021976:CDS |
GCCTGAACTAACATAATCTT+CGG | 0.495928 | 7.1:-80469191 | None:intergenic |
CTGAAAACAGATGGCATCCC+TGG | 0.496287 | 7.1:+80467011 | MS.gene021976:CDS |
GATGTGTATGAAACTGACTT+TGG | 0.501705 | 7.1:+80480279 | MS.gene021976:CDS |
AGGCTGCAGGTTGCAACAAA+GGG | 0.510518 | 7.1:+80466948 | MS.gene021976:CDS |
ACACAAGCTGCATTAGCAAA+TGG | 0.511749 | 7.1:+80467161 | MS.gene021976:CDS |
AAAACTAAGTTCTATGTCGT+TGG | 0.512169 | 7.1:+80466867 | MS.gene021976:CDS |
AATGCCTATTCAGTTGCAAA+AGG | 0.512467 | 7.1:+80466984 | MS.gene021976:CDS |
ATACTTGTCCCAATTAATCT+CGG | 0.517923 | 7.1:-80465656 | None:intergenic |
CAAACAATTTCCAAAATATG+TGG | 0.518748 | 7.1:-80480088 | None:intergenic |
GGCATCCCTGGTTTGTATAG+GGG | 0.523517 | 7.1:+80467023 | MS.gene021976:CDS |
CTTAGAATCAGAAAGACAAA+AGG | 0.523580 | 7.1:-80480352 | None:intergenic |
GTATGAAACTGACTTTGGAT+TGG | 0.535450 | 7.1:+80480284 | MS.gene021976:CDS |
AACATAATCTTCGGCACACT+AGG | 0.539834 | 7.1:-80469182 | None:intergenic |
GGCATTCGGGGATTGTATCG+AGG | 0.544355 | 7.1:+80468016 | MS.gene021976:CDS |
TCTTCAAAATCATCGTCTGA+TGG | 0.545229 | 7.1:-80480006 | None:intergenic |
GCATTCGGGGATTGTATCGA+GGG | 0.546110 | 7.1:+80468017 | MS.gene021976:CDS |
ATCAAAGAAGATGGTTGGAA+AGG | 0.546150 | 7.1:+80470882 | MS.gene021976:CDS |
TTGATGGTGCAAGGATACTC+AGG | 0.550567 | 7.1:+80467938 | MS.gene021976:CDS |
CAGGACATGCCCAATATAGT+GGG | 0.550895 | 7.1:+80467957 | MS.gene021976:CDS |
AATCTTCGGCACACTAGGAC+TGG | 0.552948 | 7.1:-80469177 | None:intergenic |
TAGGCTGCAGGTTGCAACAA+AGG | 0.553595 | 7.1:+80466947 | MS.gene021976:CDS |
CTTACCTCCAAATGAAGCGT+TGG | 0.558108 | 7.1:-80468105 | None:intergenic |
CTGGTCCGGAGTGAAAGCTT+GGG | 0.562269 | 7.1:-80474219 | None:intergenic |
TTCATCATTATTGATAACAT+CGG | 0.563054 | 7.1:-80480322 | None:intergenic |
GACCAGAATCATATTCCTCT+CGG | 0.564400 | 7.1:+80467076 | MS.gene021976:CDS |
GATTCTAAGGATGAATATTG+TGG | 0.567340 | 7.1:+80480366 | MS.gene021976:CDS |
GATTATGTTAGTTCAGGCTG+CGG | 0.569664 | 7.1:+80469196 | MS.gene021976:CDS |
GTTGGAAAGGTCTATATAGA+GGG | 0.571819 | 7.1:+80470895 | MS.gene021976:CDS |
CTTGGGACATATCGCCAAGT+AGG | 0.575940 | 7.1:-80474202 | None:intergenic |
TTGTGGTATTGAAGTTGCTA+TGG | 0.576201 | 7.1:+80480383 | MS.gene021976:CDS |
AGCCAAAAGTTGATGGTGCA+AGG | 0.578791 | 7.1:+80467929 | MS.gene021976:CDS |
ATTATGTTAGTTCAGGCTGC+GGG | 0.579646 | 7.1:+80469197 | MS.gene021976:CDS |
GCAGTGTGGTGGGCTAGTTA+TGG | 0.583625 | 7.1:+80468076 | MS.gene021976:CDS |
CAATTTCCAAAATATGTGGA+AGG | 0.598070 | 7.1:-80480084 | None:intergenic |
ATTGACAGACTCTTGGACCA+AGG | 0.615172 | 7.1:+80469137 | MS.gene021976:intron |
ATGTTAGTTCAGGCTGCGGG+AGG | 0.619868 | 7.1:+80469200 | MS.gene021976:CDS |
CGTGTCTTGATAGTATCCAA+TGG | 0.624576 | 7.1:-80469260 | None:intergenic |
GTCTTGCAACACTACCAAAG+AGG | 0.626377 | 7.1:+80480118 | MS.gene021976:CDS |
TGTTACGGTAGCACTTTACC+CGG | 0.628270 | 7.1:+80466908 | MS.gene021976:CDS |
GTCCTGCATTACGACACCAT+TGG | 0.634817 | 7.1:+80469244 | MS.gene021976:CDS |
AAAGGACTACTGAAAACAGA+TGG | 0.636049 | 7.1:+80467002 | MS.gene021976:CDS |
TTAAGGTCTGATGGCATTCG+GGG | 0.638108 | 7.1:+80468004 | MS.gene021976:CDS |
AGGACATGCCCAATATAGTG+GGG | 0.658055 | 7.1:+80467958 | MS.gene021976:CDS |
ATGAAACTGACTTTGGATTG+GGG | 0.661666 | 7.1:+80480286 | MS.gene021976:CDS |
TGTCGTAATGCAGGACGCAG+TGG | 0.669595 | 7.1:-80469237 | None:intergenic |
GAGAGGAATATGATTCTGGT+CGG | 0.670989 | 7.1:-80467074 | None:intergenic |
TGTGTTTGTACCAATTGATG+TGG | 0.675521 | 7.1:+80467220 | MS.gene021976:CDS |
TATGTCCCAAGCTTTCACTC+CGG | 0.680734 | 7.1:+80474214 | MS.gene021976:CDS |
GGACATGCCCAATATAGTGG+GGG | 0.682963 | 7.1:+80467959 | MS.gene021976:CDS |
CATTGGATACTATCAAGACA+CGG | 0.687482 | 7.1:+80469261 | MS.gene021976:CDS |
ATTCACCTTCTAGCGCAGTG+TGG | 0.697151 | 7.1:+80468062 | MS.gene021976:CDS |
GACAGACTCTTGGACCAAGG+TGG | 0.715550 | 7.1:+80469140 | MS.gene021976:intron |
GTAAAGTGCTACCGTAACAC+CGG | 0.722975 | 7.1:-80466904 | None:intergenic |
TTGTGGTCTCAAGAACCGAG+AGG | 0.735441 | 7.1:-80467091 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 80465634 | 80480476 | 80465634 | ID=MS.gene021976 |
chr7.1 | mRNA | 80465634 | 80480476 | 80465634 | ID=MS.gene021976.t1;Parent=MS.gene021976 |
chr7.1 | exon | 80465634 | 80465674 | 80465634 | ID=MS.gene021976.t1.exon1;Parent=MS.gene021976.t1 |
chr7.1 | CDS | 80465634 | 80465674 | 80465634 | ID=cds.MS.gene021976.t1;Parent=MS.gene021976.t1 |
chr7.1 | exon | 80466860 | 80467241 | 80466860 | ID=MS.gene021976.t1.exon2;Parent=MS.gene021976.t1 |
chr7.1 | CDS | 80466860 | 80467241 | 80466860 | ID=cds.MS.gene021976.t1;Parent=MS.gene021976.t1 |
chr7.1 | exon | 80467926 | 80468122 | 80467926 | ID=MS.gene021976.t1.exon3;Parent=MS.gene021976.t1 |
chr7.1 | CDS | 80467926 | 80468122 | 80467926 | ID=cds.MS.gene021976.t1;Parent=MS.gene021976.t1 |
chr7.1 | exon | 80469145 | 80469289 | 80469145 | ID=MS.gene021976.t1.exon4;Parent=MS.gene021976.t1 |
chr7.1 | CDS | 80469145 | 80469289 | 80469145 | ID=cds.MS.gene021976.t1;Parent=MS.gene021976.t1 |
chr7.1 | exon | 80470831 | 80470984 | 80470831 | ID=MS.gene021976.t1.exon5;Parent=MS.gene021976.t1 |
chr7.1 | CDS | 80470831 | 80470984 | 80470831 | ID=cds.MS.gene021976.t1;Parent=MS.gene021976.t1 |
chr7.1 | exon | 80474194 | 80474255 | 80474194 | ID=MS.gene021976.t1.exon6;Parent=MS.gene021976.t1 |
chr7.1 | CDS | 80474194 | 80474255 | 80474194 | ID=cds.MS.gene021976.t1;Parent=MS.gene021976.t1 |
chr7.1 | exon | 80479991 | 80480476 | 80479991 | ID=MS.gene021976.t1.exon7;Parent=MS.gene021976.t1 |
chr7.1 | CDS | 80479991 | 80480476 | 80479991 | ID=cds.MS.gene021976.t1;Parent=MS.gene021976.t1 |
Gene Sequence |
Protein sequence |