Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022130.t1 | XP_003621668.1 | 98.5 | 388 | 3 | 2 | 1 | 385 | 1 | 388 | 5.10E-221 | 776.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022130.t1 | Q9S9K4 | 42.5 | 388 | 209 | 8 | 2 | 386 | 6 | 382 | 1.6e-90 | 334.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022130.t1 | G7KTS2 | 98.5 | 388 | 3 | 2 | 1 | 385 | 1 | 388 | 3.7e-221 | 776.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene022130 | MS.gene024430 | PPI |
MS.gene050655 | MS.gene022130 | PPI |
MS.gene022130 | MS.gene025899 | PPI |
MS.gene022130 | MS.gene22706 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022130.t1 | MTR_7g021510 | 98.201 | 389 | 4 | 2 | 1 | 386 | 1 | 389 | 0.0 | 785 |
MS.gene022130.t1 | MTR_1g078240 | 51.955 | 358 | 165 | 2 | 23 | 380 | 26 | 376 | 1.18e-135 | 396 |
MS.gene022130.t1 | MTR_7g080230 | 51.289 | 388 | 182 | 4 | 2 | 386 | 3 | 386 | 3.65e-135 | 398 |
MS.gene022130.t1 | MTR_1g078240 | 51.955 | 358 | 165 | 2 | 23 | 380 | 26 | 376 | 1.27e-134 | 397 |
MS.gene022130.t1 | MTR_1g078240 | 51.955 | 358 | 165 | 2 | 23 | 380 | 26 | 376 | 1.58e-134 | 396 |
MS.gene022130.t1 | MTR_7g080230 | 51.525 | 295 | 137 | 3 | 95 | 386 | 25 | 316 | 6.19e-98 | 300 |
MS.gene022130.t1 | MTR_1g061940 | 35.338 | 399 | 239 | 7 | 5 | 386 | 10 | 406 | 6.58e-83 | 265 |
MS.gene022130.t1 | MTR_7g102750 | 36.049 | 405 | 237 | 8 | 1 | 386 | 1 | 402 | 6.74e-83 | 263 |
MS.gene022130.t1 | MTR_7g102750 | 36.049 | 405 | 237 | 8 | 1 | 386 | 1 | 402 | 1.13e-82 | 264 |
MS.gene022130.t1 | MTR_4g056420 | 35.264 | 397 | 239 | 7 | 3 | 386 | 6 | 397 | 2.33e-80 | 257 |
MS.gene022130.t1 | MTR_2g084550 | 38.060 | 402 | 227 | 9 | 1 | 385 | 1 | 397 | 7.31e-80 | 256 |
MS.gene022130.t1 | MTR_5g061690 | 30.938 | 320 | 187 | 13 | 67 | 373 | 97 | 395 | 2.35e-29 | 120 |
MS.gene022130.t1 | MTR_5g016260 | 29.907 | 321 | 189 | 11 | 70 | 380 | 87 | 381 | 9.93e-29 | 119 |
MS.gene022130.t1 | MTR_5g016260 | 29.907 | 321 | 189 | 11 | 70 | 380 | 87 | 381 | 1.53e-28 | 119 |
MS.gene022130.t1 | MTR_8g075010 | 32.979 | 282 | 156 | 11 | 63 | 332 | 91 | 351 | 2.12e-27 | 115 |
MS.gene022130.t1 | MTR_3g087780 | 27.937 | 315 | 198 | 11 | 71 | 374 | 99 | 395 | 9.30e-27 | 113 |
MS.gene022130.t1 | MTR_6g084710 | 27.624 | 362 | 193 | 14 | 58 | 386 | 180 | 505 | 1.29e-26 | 112 |
MS.gene022130.t1 | MTR_2g059460 | 29.355 | 310 | 183 | 11 | 72 | 368 | 60 | 346 | 2.23e-26 | 110 |
MS.gene022130.t1 | MTR_6g084710 | 27.654 | 358 | 190 | 14 | 58 | 382 | 180 | 501 | 8.81e-26 | 110 |
MS.gene022130.t1 | MTR_3g028120 | 30.897 | 301 | 182 | 11 | 39 | 331 | 59 | 341 | 8.86e-26 | 109 |
MS.gene022130.t1 | MTR_0036s0050 | 29.494 | 356 | 210 | 14 | 39 | 379 | 57 | 386 | 1.60e-25 | 108 |
MS.gene022130.t1 | MTR_5g022880 | 29.771 | 262 | 159 | 8 | 71 | 325 | 112 | 355 | 3.75e-25 | 108 |
MS.gene022130.t1 | MTR_8g075090 | 30.502 | 259 | 151 | 10 | 71 | 322 | 112 | 348 | 1.52e-24 | 106 |
MS.gene022130.t1 | MTR_8g075090 | 30.502 | 259 | 151 | 10 | 71 | 322 | 112 | 348 | 1.54e-24 | 106 |
MS.gene022130.t1 | MTR_8g075090 | 30.502 | 259 | 151 | 10 | 71 | 322 | 112 | 348 | 1.64e-24 | 106 |
MS.gene022130.t1 | MTR_3g097150 | 28.488 | 344 | 194 | 17 | 70 | 391 | 101 | 414 | 2.35e-24 | 105 |
MS.gene022130.t1 | MTR_5g080890 | 27.974 | 311 | 193 | 12 | 66 | 366 | 82 | 371 | 2.60e-24 | 105 |
MS.gene022130.t1 | MTR_8g094590 | 28.108 | 370 | 208 | 15 | 39 | 382 | 38 | 375 | 7.76e-24 | 103 |
MS.gene022130.t1 | MTR_4g095270 | 27.245 | 323 | 195 | 12 | 70 | 380 | 79 | 373 | 1.04e-23 | 104 |
MS.gene022130.t1 | MTR_8g094590 | 28.108 | 370 | 208 | 15 | 39 | 382 | 38 | 375 | 1.20e-23 | 102 |
MS.gene022130.t1 | MTR_4g095270 | 27.245 | 323 | 195 | 12 | 70 | 380 | 79 | 373 | 1.31e-23 | 104 |
MS.gene022130.t1 | MTR_2g028190 | 30.211 | 331 | 183 | 16 | 70 | 379 | 101 | 404 | 1.38e-23 | 103 |
MS.gene022130.t1 | MTR_5g080960 | 27.974 | 311 | 193 | 12 | 66 | 366 | 82 | 371 | 3.01e-23 | 102 |
MS.gene022130.t1 | MTR_5g038360 | 29.885 | 261 | 159 | 8 | 72 | 325 | 89 | 332 | 4.13e-23 | 101 |
MS.gene022130.t1 | MTR_8g038280 | 29.973 | 367 | 204 | 22 | 27 | 375 | 51 | 382 | 1.07e-22 | 100 |
MS.gene022130.t1 | MTR_0221s0060 | 35.115 | 131 | 84 | 1 | 68 | 198 | 6 | 135 | 1.12e-22 | 94.0 |
MS.gene022130.t1 | MTR_8g094590 | 29.900 | 301 | 166 | 13 | 39 | 326 | 38 | 306 | 1.51e-22 | 98.2 |
MS.gene022130.t1 | MTR_4g007740 | 27.056 | 377 | 227 | 15 | 34 | 395 | 99 | 442 | 4.64e-22 | 99.0 |
MS.gene022130.t1 | MTR_3g096930 | 30.714 | 280 | 155 | 13 | 54 | 326 | 69 | 316 | 5.69e-22 | 98.6 |
MS.gene022130.t1 | MTR_2g059490 | 30.855 | 269 | 158 | 12 | 72 | 329 | 59 | 310 | 5.88e-22 | 98.6 |
MS.gene022130.t1 | MTR_1g115210 | 26.598 | 391 | 228 | 14 | 29 | 397 | 106 | 459 | 9.67e-22 | 98.2 |
MS.gene022130.t1 | MTR_5g072060 | 41.358 | 162 | 84 | 7 | 131 | 286 | 364 | 520 | 1.01e-21 | 98.6 |
MS.gene022130.t1 | MTR_5g008070 | 27.410 | 332 | 205 | 12 | 70 | 388 | 80 | 388 | 1.14e-21 | 97.4 |
MS.gene022130.t1 | MTR_3g053710 | 26.667 | 345 | 199 | 14 | 70 | 392 | 116 | 428 | 1.88e-21 | 97.1 |
MS.gene022130.t1 | MTR_0036s0070 | 27.859 | 341 | 199 | 15 | 39 | 365 | 57 | 364 | 2.18e-21 | 96.7 |
MS.gene022130.t1 | MTR_6g085010 | 28.808 | 302 | 177 | 12 | 72 | 365 | 157 | 428 | 2.14e-20 | 94.0 |
MS.gene022130.t1 | MTR_4g023650 | 28.159 | 277 | 175 | 9 | 51 | 322 | 43 | 300 | 3.66e-20 | 92.8 |
MS.gene022130.t1 | MTR_4g045857 | 29.200 | 250 | 144 | 9 | 72 | 308 | 59 | 288 | 1.27e-19 | 89.4 |
MS.gene022130.t1 | MTR_8g096990 | 27.576 | 330 | 186 | 13 | 66 | 375 | 82 | 378 | 1.44e-19 | 91.3 |
MS.gene022130.t1 | MTR_7g062360 | 27.365 | 296 | 171 | 10 | 74 | 351 | 62 | 331 | 4.78e-19 | 89.7 |
MS.gene022130.t1 | MTR_5g091130 | 26.549 | 339 | 203 | 11 | 70 | 383 | 190 | 507 | 5.25e-19 | 90.1 |
MS.gene022130.t1 | MTR_5g044770 | 28.349 | 321 | 187 | 15 | 70 | 375 | 85 | 377 | 5.32e-19 | 89.4 |
MS.gene022130.t1 | MTR_0024s0040 | 29.290 | 338 | 209 | 14 | 39 | 366 | 31 | 348 | 1.48e-18 | 87.8 |
MS.gene022130.t1 | MTR_3g046300 | 25.532 | 329 | 217 | 11 | 70 | 383 | 96 | 411 | 1.70e-18 | 88.2 |
MS.gene022130.t1 | MTR_0036s0110 | 27.933 | 358 | 211 | 17 | 36 | 381 | 71 | 393 | 2.44e-18 | 87.4 |
MS.gene022130.t1 | MTR_7g117430 | 27.829 | 327 | 188 | 16 | 70 | 379 | 140 | 435 | 2.62e-18 | 87.8 |
MS.gene022130.t1 | MTR_5g061690 | 28.839 | 267 | 162 | 11 | 115 | 373 | 10 | 256 | 3.13e-18 | 86.7 |
MS.gene022130.t1 | MTR_1g039270 | 24.716 | 352 | 219 | 13 | 63 | 397 | 120 | 442 | 3.52e-18 | 87.0 |
MS.gene022130.t1 | MTR_1g029810 | 29.057 | 265 | 161 | 10 | 69 | 329 | 55 | 296 | 1.24e-17 | 85.1 |
MS.gene022130.t1 | MTR_4g023630 | 27.869 | 305 | 180 | 14 | 51 | 344 | 43 | 318 | 1.50e-17 | 85.1 |
MS.gene022130.t1 | MTR_1g029810 | 29.057 | 265 | 161 | 10 | 69 | 329 | 55 | 296 | 1.57e-17 | 85.1 |
MS.gene022130.t1 | MTR_0050s0050 | 47.191 | 89 | 45 | 1 | 112 | 200 | 2 | 88 | 2.00e-17 | 80.5 |
MS.gene022130.t1 | MTR_5g008110 | 26.433 | 314 | 184 | 14 | 69 | 365 | 65 | 348 | 6.61e-17 | 82.8 |
MS.gene022130.t1 | MTR_5g008150 | 26.708 | 322 | 193 | 16 | 69 | 375 | 61 | 354 | 3.28e-16 | 80.9 |
MS.gene022130.t1 | MTR_5g044570 | 27.178 | 287 | 145 | 9 | 72 | 340 | 90 | 330 | 3.44e-16 | 80.9 |
MS.gene022130.t1 | MTR_3g087780 | 25.843 | 267 | 173 | 9 | 115 | 374 | 5 | 253 | 4.77e-16 | 80.1 |
MS.gene022130.t1 | MTR_3g087780 | 25.843 | 267 | 173 | 9 | 115 | 374 | 41 | 289 | 1.05e-15 | 79.3 |
MS.gene022130.t1 | MTR_4g109760 | 28.621 | 290 | 171 | 13 | 90 | 366 | 73 | 339 | 1.15e-15 | 79.0 |
MS.gene022130.t1 | MTR_1g111350 | 24.929 | 353 | 212 | 13 | 63 | 397 | 123 | 440 | 2.00e-15 | 78.6 |
MS.gene022130.t1 | MTR_3g053980 | 26.667 | 330 | 193 | 14 | 70 | 382 | 141 | 438 | 1.10e-14 | 76.6 |
MS.gene022130.t1 | MTR_3g068000 | 25.633 | 316 | 187 | 13 | 74 | 366 | 76 | 366 | 1.47e-14 | 75.9 |
MS.gene022130.t1 | MTR_2g067830 | 26.048 | 334 | 210 | 15 | 69 | 386 | 55 | 367 | 2.98e-14 | 74.7 |
MS.gene022130.t1 | MTR_2g105300 | 25.633 | 316 | 198 | 15 | 87 | 386 | 51 | 345 | 5.14e-14 | 73.9 |
MS.gene022130.t1 | MTR_7g105850 | 23.822 | 382 | 213 | 17 | 68 | 408 | 87 | 431 | 6.76e-14 | 73.9 |
MS.gene022130.t1 | MTR_3g014290 | 27.329 | 322 | 184 | 16 | 72 | 381 | 81 | 364 | 8.16e-14 | 73.6 |
MS.gene022130.t1 | MTR_8g039540 | 26.014 | 419 | 237 | 19 | 1 | 382 | 1 | 383 | 1.24e-13 | 73.2 |
MS.gene022130.t1 | MTR_1g037630 | 27.554 | 323 | 182 | 17 | 72 | 381 | 93 | 376 | 1.43e-13 | 72.8 |
MS.gene022130.t1 | MTR_3g006820 | 24.825 | 286 | 176 | 11 | 51 | 326 | 42 | 298 | 1.45e-13 | 72.8 |
MS.gene022130.t1 | MTR_2g063110 | 23.626 | 364 | 217 | 13 | 63 | 379 | 110 | 459 | 2.76e-13 | 72.4 |
MS.gene022130.t1 | MTR_2g070430 | 23.096 | 394 | 248 | 15 | 14 | 376 | 30 | 399 | 3.98e-13 | 71.6 |
MS.gene022130.t1 | MTR_6g090290 | 25.723 | 311 | 197 | 12 | 70 | 366 | 85 | 375 | 8.51e-13 | 70.5 |
MS.gene022130.t1 | MTR_2g055840 | 24.299 | 321 | 191 | 12 | 72 | 368 | 14 | 306 | 4.21e-12 | 67.8 |
MS.gene022130.t1 | MTR_8g038310 | 24.621 | 264 | 148 | 9 | 70 | 322 | 86 | 309 | 9.29e-12 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene022130.t1 | AT1G05840 | 67.929 | 396 | 122 | 3 | 5 | 398 | 14 | 406 | 0.0 | 551 |
MS.gene022130.t1 | AT3G02740 | 48.744 | 398 | 184 | 7 | 2 | 386 | 5 | 395 | 5.31e-133 | 393 |
MS.gene022130.t1 | AT5G36260 | 43.814 | 388 | 208 | 5 | 2 | 386 | 9 | 389 | 5.45e-115 | 347 |
MS.gene022130.t1 | AT3G02740 | 52.978 | 319 | 140 | 6 | 71 | 386 | 9 | 320 | 7.78e-115 | 344 |
MS.gene022130.t1 | AT1G65240 | 44.142 | 367 | 192 | 7 | 23 | 386 | 26 | 382 | 2.08e-110 | 335 |
MS.gene022130.t1 | AT5G22850 | 38.798 | 366 | 210 | 5 | 33 | 386 | 38 | 401 | 9.56e-83 | 264 |
MS.gene022130.t1 | AT2G36670 | 36.483 | 381 | 221 | 5 | 23 | 385 | 41 | 418 | 5.95e-82 | 262 |
MS.gene022130.t1 | AT2G36670 | 36.010 | 386 | 221 | 6 | 23 | 385 | 41 | 423 | 1.30e-79 | 256 |
MS.gene022130.t1 | AT2G36670 | 37.461 | 323 | 191 | 4 | 71 | 385 | 33 | 352 | 1.75e-73 | 238 |
MS.gene022130.t1 | AT2G36670 | 37.461 | 323 | 191 | 4 | 71 | 385 | 33 | 352 | 1.75e-73 | 238 |
MS.gene022130.t1 | AT1G08210 | 35.806 | 391 | 235 | 6 | 8 | 386 | 15 | 401 | 3.19e-72 | 236 |
MS.gene022130.t1 | AT1G08210 | 35.897 | 390 | 234 | 6 | 8 | 385 | 49 | 434 | 4.56e-72 | 237 |
MS.gene022130.t1 | AT1G08210 | 35.897 | 390 | 234 | 6 | 8 | 385 | 63 | 448 | 6.33e-72 | 237 |
MS.gene022130.t1 | AT1G08210 | 35.897 | 390 | 234 | 6 | 8 | 385 | 15 | 400 | 7.76e-72 | 236 |
MS.gene022130.t1 | AT2G17760 | 31.385 | 325 | 188 | 13 | 63 | 374 | 94 | 396 | 1.33e-30 | 124 |
MS.gene022130.t1 | AT5G43100 | 26.221 | 389 | 236 | 15 | 7 | 380 | 16 | 368 | 2.81e-29 | 121 |
MS.gene022130.t1 | AT5G43100 | 26.221 | 389 | 236 | 15 | 7 | 380 | 16 | 368 | 3.95e-29 | 119 |
MS.gene022130.t1 | AT4G33490 | 27.901 | 405 | 225 | 17 | 1 | 383 | 1 | 360 | 9.79e-28 | 114 |
MS.gene022130.t1 | AT4G33490 | 27.901 | 405 | 225 | 17 | 1 | 383 | 4 | 363 | 1.43e-27 | 114 |
MS.gene022130.t1 | AT5G10080 | 28.532 | 361 | 220 | 16 | 40 | 380 | 61 | 403 | 1.94e-27 | 115 |
MS.gene022130.t1 | AT4G35880 | 31.295 | 278 | 162 | 11 | 63 | 332 | 97 | 353 | 2.36e-27 | 114 |
MS.gene022130.t1 | AT4G35880 | 31.655 | 278 | 161 | 11 | 63 | 332 | 97 | 353 | 3.55e-27 | 114 |
MS.gene022130.t1 | AT3G12700 | 28.653 | 349 | 212 | 15 | 48 | 379 | 83 | 411 | 1.09e-26 | 112 |
MS.gene022130.t1 | AT3G50050 | 28.793 | 323 | 191 | 13 | 70 | 380 | 91 | 386 | 5.83e-26 | 111 |
MS.gene022130.t1 | AT1G49050 | 31.250 | 288 | 171 | 13 | 58 | 337 | 191 | 459 | 1.34e-25 | 109 |
MS.gene022130.t1 | AT2G35615 | 29.288 | 379 | 216 | 18 | 23 | 375 | 40 | 392 | 9.76e-25 | 106 |
MS.gene022130.t1 | AT1G49050 | 31.408 | 277 | 163 | 13 | 58 | 326 | 191 | 448 | 9.77e-25 | 107 |
MS.gene022130.t1 | AT3G20015 | 29.532 | 342 | 200 | 15 | 70 | 397 | 129 | 443 | 2.64e-23 | 102 |
MS.gene022130.t1 | AT3G51360 | 26.957 | 345 | 207 | 13 | 69 | 392 | 2 | 322 | 1.00e-22 | 100 |
MS.gene022130.t1 | AT2G03200 | 27.893 | 337 | 185 | 17 | 70 | 379 | 105 | 410 | 1.87e-22 | 100 |
MS.gene022130.t1 | AT3G51360 | 27.114 | 343 | 205 | 13 | 71 | 392 | 98 | 416 | 2.76e-22 | 99.8 |
MS.gene022130.t1 | AT3G25700 | 26.934 | 349 | 222 | 12 | 63 | 389 | 75 | 412 | 2.79e-22 | 99.4 |
MS.gene022130.t1 | AT1G49050 | 30.682 | 264 | 158 | 12 | 71 | 326 | 29 | 275 | 3.15e-22 | 99.0 |
MS.gene022130.t1 | AT3G51360 | 26.316 | 361 | 221 | 13 | 71 | 410 | 98 | 434 | 3.63e-22 | 99.0 |
MS.gene022130.t1 | AT3G51360 | 27.114 | 343 | 205 | 13 | 71 | 392 | 88 | 406 | 3.78e-22 | 99.4 |
MS.gene022130.t1 | AT3G51360 | 27.726 | 321 | 197 | 11 | 71 | 380 | 98 | 394 | 4.09e-22 | 98.6 |
MS.gene022130.t1 | AT1G44130 | 27.089 | 347 | 206 | 14 | 54 | 382 | 33 | 350 | 4.17e-22 | 98.6 |
MS.gene022130.t1 | AT3G51360 | 26.316 | 361 | 221 | 13 | 71 | 410 | 88 | 424 | 5.92e-22 | 98.2 |
MS.gene022130.t1 | AT3G54400 | 28.750 | 320 | 186 | 15 | 72 | 382 | 88 | 374 | 6.86e-22 | 98.2 |
MS.gene022130.t1 | AT3G51360 | 27.726 | 321 | 197 | 11 | 71 | 380 | 88 | 384 | 7.46e-22 | 97.8 |
MS.gene022130.t1 | AT1G31450 | 30.368 | 326 | 189 | 14 | 70 | 375 | 83 | 390 | 2.40e-21 | 96.7 |
MS.gene022130.t1 | AT2G23945 | 28.344 | 314 | 190 | 13 | 71 | 373 | 95 | 384 | 4.04e-21 | 96.3 |
MS.gene022130.t1 | AT4G30030 | 25.330 | 379 | 252 | 12 | 1 | 373 | 10 | 363 | 3.57e-20 | 92.8 |
MS.gene022130.t1 | AT3G61820 | 25.796 | 314 | 196 | 10 | 70 | 368 | 133 | 424 | 7.39e-20 | 92.4 |
MS.gene022130.t1 | AT3G51360 | 28.464 | 267 | 159 | 10 | 71 | 329 | 98 | 340 | 2.76e-19 | 89.4 |
MS.gene022130.t1 | AT4G30040 | 24.534 | 322 | 197 | 10 | 72 | 373 | 85 | 380 | 4.95e-19 | 89.7 |
MS.gene022130.t1 | AT5G10770 | 27.410 | 332 | 206 | 13 | 70 | 392 | 130 | 435 | 1.89e-18 | 88.2 |
MS.gene022130.t1 | AT3G18490 | 28.451 | 355 | 200 | 14 | 63 | 397 | 153 | 473 | 1.95e-18 | 88.2 |
MS.gene022130.t1 | AT1G77480 | 25.333 | 375 | 237 | 14 | 23 | 382 | 24 | 370 | 4.55e-18 | 86.7 |
MS.gene022130.t1 | AT1G77480 | 25.333 | 375 | 237 | 14 | 23 | 382 | 24 | 370 | 6.38e-18 | 86.3 |
MS.gene022130.t1 | AT3G59080 | 25.356 | 351 | 215 | 11 | 70 | 400 | 168 | 491 | 8.68e-18 | 86.3 |
MS.gene022130.t1 | AT1G79720 | 27.508 | 309 | 178 | 12 | 83 | 373 | 144 | 424 | 1.06e-17 | 85.9 |
MS.gene022130.t1 | AT1G64830 | 28.896 | 308 | 190 | 12 | 70 | 368 | 84 | 371 | 1.12e-17 | 85.5 |
MS.gene022130.t1 | AT2G42980 | 25.862 | 348 | 219 | 11 | 70 | 400 | 158 | 483 | 4.67e-17 | 84.0 |
MS.gene022130.t1 | AT1G01300 | 25.075 | 335 | 187 | 14 | 70 | 379 | 140 | 435 | 5.10e-17 | 84.0 |
MS.gene022130.t1 | AT3G51340 | 24.068 | 295 | 189 | 9 | 71 | 349 | 102 | 377 | 1.17e-16 | 82.0 |
MS.gene022130.t1 | AT3G51340 | 27.556 | 225 | 145 | 6 | 71 | 287 | 102 | 316 | 1.33e-16 | 82.0 |
MS.gene022130.t1 | AT3G51340 | 25.769 | 260 | 166 | 7 | 71 | 322 | 102 | 342 | 1.51e-16 | 82.4 |
MS.gene022130.t1 | AT3G51340 | 27.556 | 225 | 145 | 6 | 71 | 287 | 102 | 316 | 1.93e-16 | 82.0 |
MS.gene022130.t1 | AT3G51350 | 27.434 | 226 | 144 | 8 | 71 | 287 | 101 | 315 | 2.22e-16 | 82.0 |
MS.gene022130.t1 | AT1G25510 | 25.225 | 333 | 211 | 11 | 56 | 380 | 133 | 435 | 5.05e-16 | 80.9 |
MS.gene022130.t1 | AT5G10760 | 23.977 | 342 | 220 | 12 | 33 | 365 | 92 | 402 | 5.91e-16 | 80.5 |
MS.gene022130.t1 | AT3G51330 | 26.524 | 328 | 203 | 15 | 71 | 384 | 101 | 404 | 1.28e-15 | 79.7 |
MS.gene022130.t1 | AT3G51330 | 26.524 | 328 | 203 | 15 | 71 | 384 | 101 | 404 | 1.50e-15 | 79.0 |
MS.gene022130.t1 | AT3G51330 | 26.524 | 328 | 203 | 15 | 71 | 384 | 101 | 404 | 1.62e-15 | 79.0 |
MS.gene022130.t1 | AT3G52500 | 25.714 | 350 | 197 | 13 | 68 | 379 | 86 | 410 | 2.51e-15 | 78.6 |
MS.gene022130.t1 | AT3G42550 | 34.454 | 119 | 60 | 3 | 70 | 183 | 76 | 181 | 1.37e-14 | 75.9 |
MS.gene022130.t1 | AT1G09750 | 27.044 | 318 | 190 | 15 | 69 | 373 | 101 | 389 | 1.95e-14 | 75.5 |
MS.gene022130.t1 | AT3G51360 | 26.102 | 295 | 179 | 11 | 114 | 392 | 9 | 280 | 9.09e-14 | 73.2 |
MS.gene022130.t1 | AT3G51360 | 26.102 | 295 | 179 | 11 | 114 | 392 | 9 | 280 | 9.09e-14 | 73.2 |
MS.gene022130.t1 | AT5G07030 | 27.726 | 321 | 188 | 17 | 72 | 381 | 115 | 402 | 1.93e-13 | 72.4 |
MS.gene022130.t1 | AT2G28225 | 26.861 | 309 | 183 | 17 | 71 | 371 | 66 | 339 | 3.58e-13 | 71.6 |
MS.gene022130.t1 | AT2G28010 | 25.402 | 311 | 181 | 13 | 71 | 371 | 64 | 333 | 5.46e-13 | 70.9 |
MS.gene022130.t1 | AT5G33340 | 27.687 | 307 | 193 | 12 | 70 | 366 | 88 | 375 | 5.49e-13 | 71.2 |
MS.gene022130.t1 | AT5G02190 | 25.094 | 267 | 164 | 11 | 81 | 332 | 82 | 327 | 2.29e-12 | 69.3 |
MS.gene022130.t1 | AT3G25700 | 31.655 | 139 | 86 | 4 | 70 | 206 | 82 | 213 | 2.14e-11 | 65.5 |
MS.gene022130.t1 | AT2G28030 | 25.962 | 312 | 178 | 16 | 71 | 371 | 60 | 329 | 3.06e-11 | 65.5 |
Find 104 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GACCTTGAAAATCAGGTTAT+TGG | 0.154528 | 7.4:-80157581 | MS.gene022130:CDS |
GCTAATGGAAGTGTTATATT+TGG | 0.167832 | 7.4:-80162960 | MS.gene022130:CDS |
AGGCTTTATTATGCGAAAAT+TGG | 0.187425 | 7.4:-80164642 | MS.gene022130:CDS |
TATACATGCTTTCAATATTC+TGG | 0.202777 | 7.4:-80160235 | MS.gene022130:CDS |
ATGTTTGCTCATTGCTTAAA+TGG | 0.204920 | 7.4:-80161257 | MS.gene022130:CDS |
AACAGTTACCCGACGGAATC+AGG | 0.250925 | 7.4:+80164835 | None:intergenic |
GAGCTCTGCAAAGAGATAAA+TGG | 0.267376 | 7.4:-80163128 | MS.gene022130:CDS |
TCAAAATAAAAGGTGACATT+TGG | 0.307429 | 7.4:+80158993 | None:intergenic |
CATTGCTTAAATGGAGTAAA+TGG | 0.311727 | 7.4:-80161248 | MS.gene022130:CDS |
ATGCATCTGTTGAGAGATTA+AGG | 0.311890 | 7.4:+80160475 | None:intergenic |
TAATGATTCCTGTCCATATC+TGG | 0.313898 | 7.4:-80163075 | MS.gene022130:CDS |
CTTAAAACTGCTTCAGCTAA+TGG | 0.313905 | 7.4:-80162975 | MS.gene022130:CDS |
CTTGATGGGATACTTGGATT+TGG | 0.329509 | 7.4:-80161335 | MS.gene022130:CDS |
CTATCAGCCATTAGTATATA+AGG | 0.334902 | 7.4:-80160382 | MS.gene022130:intron |
TATTATGCGAAAATTGGAAT+TGG | 0.344165 | 7.4:-80164636 | MS.gene022130:CDS |
TACTATTTGCAAGTAGATAC+TGG | 0.346968 | 7.4:-80164597 | MS.gene022130:CDS |
GACGACACAGAGATGCTCTT+TGG | 0.359722 | 7.4:-80156001 | MS.gene022130:CDS |
ACTGGCGTCGACCTTCCTTT+AGG | 0.372052 | 7.4:-80164871 | MS.gene022130:CDS |
TCACCATATATCTCCAGATA+TGG | 0.375783 | 7.4:+80163062 | None:intergenic |
TGTCCATATCTGGAGATATA+TGG | 0.378802 | 7.4:-80163065 | MS.gene022130:CDS |
TTGAGAGATTAAGGAAAGTA+TGG | 0.379252 | 7.4:+80160484 | None:intergenic |
AGCTCTGCAAAGAGATAAAT+GGG | 0.379514 | 7.4:-80163127 | MS.gene022130:CDS |
CTAATGGAAGTGTTATATTT+GGG | 0.387256 | 7.4:-80162959 | MS.gene022130:intron |
GAAGCGCTTGATGGGATACT+TGG | 0.391907 | 7.4:-80161341 | MS.gene022130:CDS |
TTGTATACCTTATATACTAA+TGG | 0.394050 | 7.4:+80160375 | None:intergenic |
ACGACACAGAGATGCTCTTT+GGG | 0.411117 | 7.4:-80156000 | MS.gene022130:CDS |
ATTTCACAACTTTCTTCCTC+TGG | 0.412257 | 7.4:-80161293 | MS.gene022130:CDS |
ATAGATCCCGTCTGGTAGAT+AGG | 0.419699 | 7.4:+80160401 | None:intergenic |
TGAAAATGGACTCTCCTTGA+AGG | 0.420116 | 7.4:-80158973 | MS.gene022130:CDS |
AACATAAAGGAATCTTCTTC+TGG | 0.424248 | 7.4:-80163173 | MS.gene022130:CDS |
TGCTACGGCATCAGAGGATA+AGG | 0.428738 | 7.4:-80156066 | MS.gene022130:CDS |
TGCAAATAGTAATCCTTTGA+CGG | 0.434804 | 7.4:+80164609 | None:intergenic |
GTACTATTTGATCAAGTGTC+CGG | 0.440924 | 7.4:-80163002 | MS.gene022130:CDS |
TCTTACGCTCTACAACATAA+AGG | 0.458427 | 7.4:-80163186 | MS.gene022130:CDS |
CTTCTTACGATTTCTACTGT+TGG | 0.461275 | 7.4:-80165000 | MS.gene022130:CDS |
GGGCGACCGGTGCCGCCTAA+AGG | 0.466817 | 7.4:+80164856 | None:intergenic |
GATCATCGGAGAATTTGTAT+TGG | 0.467860 | 7.4:+80164953 | None:intergenic |
GACCTTCCTTTAGGCGGCAC+CGG | 0.469975 | 7.4:-80164862 | MS.gene022130:CDS |
TCAAACGAAGAAGCGCTTGA+TGG | 0.488151 | 7.4:-80161350 | MS.gene022130:CDS |
CGTCAAATCTCCCTCCTCAC+TGG | 0.490751 | 7.4:-80164889 | MS.gene022130:CDS |
TACTATTTGATCAAGTGTCC+GGG | 0.497694 | 7.4:-80163001 | MS.gene022130:CDS |
TAAACAAATGCATACTGGTC+AGG | 0.498519 | 7.4:+80161164 | None:intergenic |
CACTGCAGGTTACTTTGTAA+AGG | 0.500888 | 7.4:-80163030 | MS.gene022130:CDS |
ACCGGTCGCCCTGATTCCGT+CGG | 0.511580 | 7.4:-80164844 | MS.gene022130:CDS |
TTATGCTGCAGTGTTGATGA+TGG | 0.516485 | 7.4:-80159020 | MS.gene022130:intron |
CTGAACAAAGAGACAGTAAA+GGG | 0.516859 | 7.4:-80160452 | MS.gene022130:CDS |
AGGTGTGGTGCTAGACAATC+TGG | 0.516990 | 7.4:-80161386 | MS.gene022130:CDS |
TTGAAAATCAGGTTATTGGA+TGG | 0.523428 | 7.4:-80157577 | MS.gene022130:CDS |
TCTACTGTTGGCGCCAACCA+CGG | 0.524970 | 7.4:-80164988 | MS.gene022130:CDS |
ACAGTTACCCGACGGAATCA+GGG | 0.525989 | 7.4:+80164836 | None:intergenic |
AATGGCTGATAGATCCCGTC+TGG | 0.526184 | 7.4:+80160393 | None:intergenic |
ATCGTGTGGATAAACCTTCA+AGG | 0.526209 | 7.4:+80158959 | None:intergenic |
GCATACTGGTCAGGTAATAA+CGG | 0.533430 | 7.4:+80161173 | None:intergenic |
AAGGTCGACGCCAGTGAGGA+GGG | 0.533984 | 7.4:+80164879 | None:intergenic |
CAAACGAAGAAGCGCTTGAT+GGG | 0.535187 | 7.4:-80161349 | MS.gene022130:CDS |
GACGTTGAAAACGCCGTGGT+TGG | 0.538597 | 7.4:+80164975 | None:intergenic |
CAGTGAGGAGGGAGATTTGA+CGG | 0.542175 | 7.4:+80164890 | None:intergenic |
TGGAATTGGAACTCCGTCAA+AGG | 0.546019 | 7.4:-80164622 | MS.gene022130:CDS |
ATATATCTCCAGATATGGAC+AGG | 0.546608 | 7.4:+80163067 | None:intergenic |
GCTACGGCATCAGAGGATAA+GGG | 0.548027 | 7.4:-80156065 | MS.gene022130:CDS |
ACACCAAGGTTACTTCTAGT+AGG | 0.550642 | 7.4:+80164531 | None:intergenic |
GGAGGTGGTATATTTGCGAT+TGG | 0.555006 | 7.4:-80161227 | MS.gene022130:CDS |
GACCGGTGCCGCCTAAAGGA+AGG | 0.555280 | 7.4:+80164860 | None:intergenic |
GAAAGCATGTATACTCGTCA+TGG | 0.560971 | 7.4:+80160245 | None:intergenic |
CCCGACGGAATCAGGGCGAC+CGG | 0.561274 | 7.4:+80164843 | None:intergenic |
GGTGATGGCAGCTCCACTGC+AGG | 0.561770 | 7.4:-80163044 | MS.gene022130:CDS |
CCGGTCGCCCTGATTCCGTC+GGG | 0.562084 | 7.4:-80164843 | MS.gene022130:intron |
GAAGGTCGACGCCAGTGAGG+AGG | 0.568643 | 7.4:+80164878 | None:intergenic |
CATGCTTTCAATATTCTGGA+AGG | 0.569785 | 7.4:-80160231 | MS.gene022130:intron |
GAGAGAACGTTGTTGATCAT+CGG | 0.571559 | 7.4:+80164939 | None:intergenic |
CCCGTCTGGTAGATAGGCCA+AGG | 0.572658 | 7.4:+80160407 | None:intergenic |
AACATGACGGCGATTCAAGT+TGG | 0.572867 | 7.4:-80160507 | MS.gene022130:CDS |
TGTGTCGTCGTGCCACGACG+TGG | 0.579745 | 7.4:+80156015 | None:intergenic |
AGTACGCTTGTAGAAATACA+TGG | 0.581981 | 7.4:-80156103 | MS.gene022130:CDS |
TATCCTCTGATGCCGTAGCA+CGG | 0.583808 | 7.4:+80156069 | None:intergenic |
TTAAATGGAGTAAATGGAGG+TGG | 0.590871 | 7.4:-80161242 | MS.gene022130:CDS |
AACGGAGTTGTGTTCACTGT+AGG | 0.594168 | 7.4:+80161191 | None:intergenic |
CTTTACAAAGTAACCTGCAG+TGG | 0.595178 | 7.4:+80163031 | None:intergenic |
TCTGAACAAAGAGACAGTAA+AGG | 0.603889 | 7.4:-80160453 | MS.gene022130:CDS |
AATTGACAGTGGTACAACCT+TGG | 0.604621 | 7.4:-80160424 | MS.gene022130:CDS |
ACCTTGGCCTATCTACCAGA+CGG | 0.608325 | 7.4:-80160408 | MS.gene022130:CDS |
GATCTCTACGCACCGTGCTA+CGG | 0.610504 | 7.4:-80156081 | MS.gene022130:CDS |
TGTCCTACTAGAAGTAACCT+TGG | 0.614346 | 7.4:-80164534 | MS.gene022130:CDS |
GTGTCGTCGTGCCACGACGT+GGG | 0.615271 | 7.4:+80156016 | None:intergenic |
TTGCAGAGCTCTTGATCACA+CGG | 0.617035 | 7.4:+80163140 | None:intergenic |
CCTTGGCCTATCTACCAGAC+GGG | 0.625442 | 7.4:-80160407 | MS.gene022130:CDS |
TATCTGGAGATATATGGTGA+TGG | 0.634106 | 7.4:-80163059 | MS.gene022130:CDS |
GAAAGAAACAAATAATCGTG+TGG | 0.635029 | 7.4:+80158945 | None:intergenic |
GCACCGTGCTACGGCATCAG+AGG | 0.635791 | 7.4:-80156072 | MS.gene022130:CDS |
ACATTACAGTGTCAACATGA+CGG | 0.644578 | 7.4:-80160520 | MS.gene022130:CDS |
GGCGTCGACCTTCCTTTAGG+CGG | 0.650559 | 7.4:-80164868 | MS.gene022130:CDS |
TGCTTAAATGGAGTAAATGG+AGG | 0.650674 | 7.4:-80161245 | MS.gene022130:CDS |
TACTGGAACTGATATGATGT+GGG | 0.650884 | 7.4:-80164580 | MS.gene022130:CDS |
AAGACTCTCTTCCCACGTCG+TGG | 0.653779 | 7.4:-80156027 | MS.gene022130:CDS |
GTAGTCATGAGCTTTGAGAA+CGG | 0.656404 | 7.4:+80164915 | None:intergenic |
GTCATGTTGACACTGTAATG+TGG | 0.666125 | 7.4:+80160522 | None:intergenic |
ATACTGGAACTGATATGATG+TGG | 0.674951 | 7.4:-80164581 | MS.gene022130:CDS |
CTCTGCAAAGAGATAAATGG+GGG | 0.678698 | 7.4:-80163125 | MS.gene022130:CDS |
ACTATTTGATCAAGTGTCCG+GGG | 0.681013 | 7.4:-80163000 | MS.gene022130:CDS |
AAAGGGACAATAATTGACAG+TGG | 0.722747 | 7.4:-80160435 | MS.gene022130:CDS |
AAGGAAGGTCGACGCCAGTG+AGG | 0.725500 | 7.4:+80164875 | None:intergenic |
GCTCTGCAAAGAGATAAATG+GGG | 0.754212 | 7.4:-80163126 | MS.gene022130:CDS |
ATTGGACGTTGAAAACGCCG+TGG | 0.761258 | 7.4:+80164971 | None:intergenic |
TGAGGAGGGAGATTTGACGG+CGG | 0.803572 | 7.4:+80164893 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 80155953 | 80165052 | 80155953 | ID=MS.gene022130 |
chr7.4 | mRNA | 80155953 | 80165052 | 80155953 | ID=MS.gene022130.t1;Parent=MS.gene022130 |
chr7.4 | exon | 80164844 | 80165052 | 80164844 | ID=MS.gene022130.t1.exon1;Parent=MS.gene022130.t1 |
chr7.4 | CDS | 80164844 | 80165052 | 80164844 | ID=cds.MS.gene022130.t1;Parent=MS.gene022130.t1 |
chr7.4 | exon | 80164533 | 80164662 | 80164533 | ID=MS.gene022130.t1.exon2;Parent=MS.gene022130.t1 |
chr7.4 | CDS | 80164533 | 80164662 | 80164533 | ID=cds.MS.gene022130.t1;Parent=MS.gene022130.t1 |
chr7.4 | exon | 80162960 | 80163213 | 80162960 | ID=MS.gene022130.t1.exon3;Parent=MS.gene022130.t1 |
chr7.4 | CDS | 80162960 | 80163213 | 80162960 | ID=cds.MS.gene022130.t1;Parent=MS.gene022130.t1 |
chr7.4 | exon | 80161179 | 80161406 | 80161179 | ID=MS.gene022130.t1.exon4;Parent=MS.gene022130.t1 |
chr7.4 | CDS | 80161179 | 80161406 | 80161179 | ID=cds.MS.gene022130.t1;Parent=MS.gene022130.t1 |
chr7.4 | exon | 80160383 | 80160545 | 80160383 | ID=MS.gene022130.t1.exon5;Parent=MS.gene022130.t1 |
chr7.4 | CDS | 80160383 | 80160545 | 80160383 | ID=cds.MS.gene022130.t1;Parent=MS.gene022130.t1 |
chr7.4 | exon | 80160232 | 80160305 | 80160232 | ID=MS.gene022130.t1.exon6;Parent=MS.gene022130.t1 |
chr7.4 | CDS | 80160232 | 80160305 | 80160232 | ID=cds.MS.gene022130.t1;Parent=MS.gene022130.t1 |
chr7.4 | exon | 80158944 | 80159031 | 80158944 | ID=MS.gene022130.t1.exon7;Parent=MS.gene022130.t1 |
chr7.4 | CDS | 80158944 | 80159031 | 80158944 | ID=cds.MS.gene022130.t1;Parent=MS.gene022130.t1 |
chr7.4 | exon | 80157564 | 80157635 | 80157564 | ID=MS.gene022130.t1.exon8;Parent=MS.gene022130.t1 |
chr7.4 | CDS | 80157564 | 80157635 | 80157564 | ID=cds.MS.gene022130.t1;Parent=MS.gene022130.t1 |
chr7.4 | exon | 80155953 | 80156132 | 80155953 | ID=MS.gene022130.t1.exon9;Parent=MS.gene022130.t1 |
chr7.4 | CDS | 80155953 | 80156132 | 80155953 | ID=cds.MS.gene022130.t1;Parent=MS.gene022130.t1 |
Gene Sequence |
Protein sequence |